Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0015244

Physical Location & Seq

Genomic Coordinates Reverse (-)

84199576 .. 84202655

Gene Structure 3080 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG618000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2610 bp

ATGGCCGATCACCACCACCACCACCACCACCGCCCCCACCGCCTCTCCCTCCCTCAACGCCCCACCACCCCCACCACCTTCGCTTCCACCACCCCCACCGCCTCCCGCCAATACCCACTCTACCCCTTCACTCCCTCCGCCGCCGCCGCCACTCCATCGAAACACCGCCTCTCTTCTCTCAACCCCAAACCCCTCTCCACCGCCGCCGGAAGCAAATCCTCTCTCTCATTTCTCTTCCTCCTCCTCCTCTCCCTCCGATCACTCTACTCCCTCCTCCCCTTCCTCCGCTCCTCCCCTTCCTTCTCTCTCTTCCCCTTCTCCTTCCTCGTCTCTCTCCTCTCCTTCCTCCTAACCCTAGCTTTCTCTCTCTTCACCTCCTCCGCCTCCGCCGCCGCCTCCAGAGACCCGTTCCACCAGAAGCCCAACCAGCCCATCTTCTCCCTCACTCTCATCACTCAATCCCAGCACAGACTCCTCGTCGCGAAATCGATTCTTCTCGCCGGAGTCTTCCTCCTCCGCTTCCAAGCTCTCCGGTACTGCGGCACCGCCGCCATGATCCTAGCCGAGATGTCTGGAAATGTGGCGGCAAGGTTCTTGGCGGAGGGGAGGAAACAGAGTGTGGTGGGCGGCGGTGGTGATCGGAATCGGAGCTCCAAGGTTCGTGGGTTTCTTGCTCTGTTTACTGGGTTGTTCTTGTTATCTATGAGCTGGGATCGGATTGAATGCTTTCCGTTTTCGGCCAAGTTTGTGCAAAAAATGGGAGTGTCTGTGTTGCCCAGAGTGGATTGTGTGAGAATTTGGCCAATGCTGCTTCCGTTTCTGTCTGGATTTTTGGGGTGTTATGAGAGGGTTTCGATGAATTGGGGGACTATTAGGCAGCTGGGGAGGAAGAGGGTTCGGGTTATTTCGTTGTTTTTTACTACTGTTGTGCTGTTCATTCCTGCTGTTGTTAGTGTTTTTATGTTTGAAGCTGAGGGAGATGGAGTTGTTTCCATTGGGAACTTGGGCTGGCCTCTGGCAAACACTGTTGTTTTCGGTGTGCTTCTGAGTGAGAGTTATAGTGATGAGAAGTTAATGAGTTCTAAAGATTTTCGGAGGGAGTATTTGGTGACTTTCTTATGTACTGTTGTATTGGAGCTGTTCTATTTTGCTGAATTGTCGCTTTGGGGGCTATTGCTTTGTGGTATGTTGCTGTACGTTGCTGTTAGGGAGTTGGATCCTTTTCATGCGAGTTATGTTGAACTGGGAATGGAGTCGTCGGAATCATTTAGTGCATCCGTTATGAAACCTATTAGGCACATTTTGAGTGAGAGGAAATCACGGAAGATTGCACTTTTCCTTCTGATCAATACCGCATACATGTTTGTGGAATTCATTGCTGGGTTCATGAGCAATAGTCTAGGGCTGATATCAGATGCCTGTCACATGTTGTTTGATTGTGCTGCTCTGGCAATTGGGCTATATGCTTCGTATATTTCGCGCTTGCCTGCAAATAATCAGTTTAACTATGGCCGTGGGAGATTTGAGGTTCTTGCAGGATATACAAATGCTGTTTTCCTGGTTTTGGTTGGAGCATTAATAGTATTGGAATCACTTGAGAGGATTTTGGACCCTCAGGAGATGTCAACTAGCAGTATACTAGTTGTTTCAATTGGAGGGCTTCTTGTCAATGTGGTTGGTTTAATCTTCTTTCATGAGGAGCATCATCATGCCCATGGTGCATCCGGATCATGCTCTCACTCCCACAGTCATCAACATTCGCATGACTCTGTTGGACATAATCATGCAGGTCATGAAAAGCTTGAGGAATCGTGTATAGCTATTTCTCATGAATGCCATGAAGAATCGTGTGCCAGCCATGATGACCATCACCAACATGGCAGTTCTGTTGGCTGCAAAGATCACCGGCACGATCACCATGATCACAGCCACCAGCATGACCACCATGACCACAGTCACCAGCATGACCACCATGACCACAGTCACCAGCATGATCACCATGACCACAGCCACCAGCATGACCACCATGATCACAGCCACCAGCATGACCACCATGGCCACAGTCACCAGCATGACAACCATGGCCACAACCACCAGCATGGTGGTTCTGAGCTGAAAAGACTGCCAACCGGTGGAGAAAAATCAACTAAGCAACAGCATCGCCACATTGACCACAACATGGAAGGAATATTTCTGCATGTTTTGGCTGACACCTTAGGGAGTGTCGGAGTTGTTATATCAACACTCTTAATTAAGTACAAGGGATGGCTTGTTGCTGATCCTGCATGCTCGATATTTATTTCTGTCTTGATTATATCTTCAGTTATCCCATTGCTCAGGAACTCTGCAGAAGTCTTGCTCCAAAGAATTCCGAGGGCACATGAGCAGGATTTGAGAAAAGCTCTTAATGATGTTAGGAAGATAAGGGGGGTTTCTGGTATTCGGAACTTGCATGTATGGAGTTTCACAAACTCAGATGTAGTGGGTACGCTCCATCTTCATGTTTCCACAGAAGTTGACAAAGGATCTGCAAAAGCTCAGGTGTCGCACTTATTACATGAAGCGGGAATCAAGGATTTAACGGTGCAGTTGGAATGTGTTGAGGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0005215 GO:0005385 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006810 GO:0006811 GO:0006812 GO:0006829 GO:0008150 GO:0008324 GO:0010035 GO:0010038 GO:0010043 GO:0012505 GO:0015075 GO:0015318 GO:0016020 GO:0022857 GO:0022890 GO:0030001 GO:0032879 GO:0034220 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0046915 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061088 GO:0065007 GO:0065008 GO:0070838 GO:0071577 GO:0071578 GO:0072509 GO:0072511 GO:0098655 GO:0098657 GO:0098659 GO:0098660 GO:0098662 GO:0098739 GO:0099587

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_efflux

Protein Analysis

869

Amino Acids

96.82

Weight (kDa)

7.26

Isoelectric Point (pI)

38.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_efflux	PF01545	444 - 576	7.4e-33	Cation efflux transmembrane domain
Cation_efflux	PF01545	717 - 787	1.5e-13	Cation efflux transmembrane domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015244)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04620 AT2G04620
fragaria_vesca	FvH4_6g49950
malus_domestica	MD17G1042100.v1.1
prunus_persica	Prupe.3G277100_v2.0.a1
pyrus_communis	pycom17g03760
rosa_chinensis	RchiOBHm_Chr2g0170121
rosa_laevigata	RLG00000021925
rosa_multiflora	Rmu_sc0013078.1_g000005
rosa_roxburghii	Rroxscaffold_2G00081570
rosa_rugosa	Rorug02G0545900.1
rosa_samantha	Rh2AG618000 Rh2BG629500 Rh2CG598900 Rh2DG641300
rosa_wichuraiana	Rw2G051170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1778
AccB1I	GGYRCC	1 cut(s)	542
AccB7I	CCANNNNNTGG	2 cut(s)	2132, 2179
AccBSI	CCGCTC	1 cut(s)	288
AccI	GTMKAC	1 cut(s)	1636
AccII	CGCG	2 cut(s)	482, 1480
AccIII	TCCGGA	1 cut(s)	1724
AclWI	GGATC	7 cut(s)	550, 720, 1211, 1224, 1735, 2273, 2533
AcoI	YGGCCR	6 cut(s)	3, 738, 800, 1510, 2056, 2083
AcsI	RAATTY	3 cut(s)	795, 1370, 2367
AcuI	CTGAAG	1 cut(s)	2304
AfaI	GTAC	5 cut(s)	536, 1123, 1196, 2258, 2488
AfiI	CCNNNNNNNGG	3 cut(s)	1564, 2132, 2179
AflIII	ACRYGT	2 cut(s)	1359, 1425
AgeI	ACCGGT	1 cut(s)	2129
AgsI	TTSAA	4 cut(s)	722, 968, 1241, 1650
AhdI	GACNNNNNGTC	1 cut(s)	476
AhlI	ACTAGT	1 cut(s)	1639
AjnI	CCWGG	1 cut(s)	1557
Alw21I	GWGCWC	1 cut(s)	653
Alw26I	GTCTC	2 cut(s)	334, 396
AlwI	GGATC	7 cut(s)	550, 720, 1211, 1224, 1735, 2273, 2533
Aor13HI	TCCGGA	1 cut(s)	1724
AoxI	GGCC	7 cut(s)	3, 738, 800, 1010, 1510, 2056, 2083
ApeKI	GCWGC	4 cut(s)	808, 877, 1442, 1893
ApoI	RAATTY	3 cut(s)	795, 1370, 2367
AseI	ATTAAT	1 cut(s)	1577
AsiGI	ACCGGT	1 cut(s)	2129
Asp700I	GAANNNNTTC	1 cut(s)	726
AspLEI	GCGC	1 cut(s)	1482
AspS9I	GGNCC	1 cut(s)	1609
AvaII	GGWCC	1 cut(s)	1609
AxyI	CCTNAGG	2 cut(s)	1614, 2215
BaeGI	GKGCMC	1 cut(s)	2380
BalI	TGGCCA	3 cut(s)	802, 2058, 2085
BamHI	GGATCC	1 cut(s)	1216
BanI	GGYRCC	1 cut(s)	542
BanII	GRGCYC	1 cut(s)	653
BbsI	GAAGAC	1 cut(s)	499
Bbv12I	GWGCWC	1 cut(s)	653
BbvCI	CCTCAGC	1 cut(s)	972
BbvI	GCAGC	4 cut(s)	795, 889, 1429, 1880
BccI	CCATC	6 cut(s)	163, 440, 974, 1875, 2259, 2502
BceAI	ACGGC	1 cut(s)	1497
BcgI	CGANNNNNNTGC	2 cut(s)	2141, 2175
BciT130I	CCWGG	1 cut(s)	1559
BclI	TGATCA	4 cut(s)	1344, 1921, 1993, 2029
BcoDI	GTCTC	2 cut(s)	334, 396
BcuI	ACTAGT	1 cut(s)	1639
BfaI	CTAG	5 cut(s)	356, 560, 1400, 1629, 1640
BfmI	CTRYAG	1 cut(s)	2346
BfuAI	ACCTGC	1 cut(s)	1778
Bme1390I	CCNGG	1 cut(s)	1559
Bme18I	GGWCC	1 cut(s)	1609
BmeRI	GACNNNNNGTC	1 cut(s)	476
BmgT120I	GGNCC	1 cut(s)	1609
BmiI	GGNNCC	3 cut(s)	544, 1218, 1611
BmrFI	CCNGG	1 cut(s)	1559
BmrI	ACTGGG	2 cut(s)	693, 1253
BmsI	GCATC	5 cut(s)	1283, 1405, 1711, 1730, 2167
BmuI	ACTGGG	2 cut(s)	693, 1253
BoxI	GACNNNNGTC	2 cut(s)	1953, 1980
BpiI	GAAGAC	1 cut(s)	499
BplI	GAGNNNNNCTC	4 cut(s)	495, 527, 2386, 2418
BpmI	CTGGAG	1 cut(s)	382
Bpu10I	CCTNAGC	3 cut(s)	972, 2336, 2538
BpuEI	CTTGAG	2 cut(s)	1616, 1823
Bsa29I	ATCGAT	1 cut(s)	488
BsaBI	GATNNNNATC	2 cut(s)	642, 1866
BsaI	GGTCTC	1 cut(s)	396
BsaJI	CCNNGG	6 cut(s)	654, 1513, 1714, 2053, 2080, 2372
BsaWI	WCCGGW	3 cut(s)	531, 1724, 2129
BsaXI	ACNNNNNCTCC	6 cut(s)	29, 59, 753, 783, 969, 999
Bsc4I	CCNNNNNNNGG	3 cut(s)	1564, 2132, 2179
Bse118I	RCCGGY	2 cut(s)	1905, 2129
Bse1I	ACTGG	2 cut(s)	688, 1248
Bse21I	CCTNAGG	2 cut(s)	1614, 2215
Bse3DI	GCAATG	2 cut(s)	1374, 2330
Bse8I	GATNNNNATC	2 cut(s)	642, 1866
BseAI	TCCGGA	1 cut(s)	1724
BseBI	CCWGG	1 cut(s)	1559
BseCI	ATCGAT	1 cut(s)	488
BseDI	CCNNGG	6 cut(s)	654, 1513, 1714, 2053, 2080, 2372
BseGI	GGATG	3 cut(s)	1274, 1721, 2270
BseJI	GATNNNNATC	2 cut(s)	642, 1866
BseLI	CCNNNNNNNGG	3 cut(s)	1564, 2132, 2179
BseMI	GCAATG	2 cut(s)	1374, 2330
BseMII	CTCAG	7 cut(s)	963, 1037, 1628, 2100, 2350, 2487, 2552
BseNI	ACTGG	2 cut(s)	688, 1248
BseSI	GKGCMC	1 cut(s)	2380
BseXI	GCAGC	4 cut(s)	795, 889, 1429, 1880
BseYI	CCCAGC	4 cut(s)	462, 708, 880, 1379
BsgI	GTGCAG	1 cut(s)	2606
Bsh1236I	CGCG	2 cut(s)	482, 1480
BshFI	GGCC	7 cut(s)	5, 740, 802, 1012, 1512, 2058, 2085
BshNI	GGYRCC	1 cut(s)	542
BshTI	ACCGGT	1 cut(s)	2129
BshVI	ATCGAT	1 cut(s)	488
BsiHKAI	GWGCWC	1 cut(s)	653
BsiSI	CCGG	6 cut(s)	207, 501, 532, 1725, 1906, 2130
BslFI	GGGAC	1 cut(s)	880
BslI	CCNNNNNNNGG	3 cut(s)	1564, 2132, 2179
BsmAI	GTCTC	2 cut(s)	334, 396
BsmBI	CGTCTC	1 cut(s)	334
BsmFI	GGGAC	1 cut(s)	880
BsmI	GAATGC	2 cut(s)	728, 1838
BsnI	GGCC	7 cut(s)	5, 740, 802, 1012, 1512, 2058, 2085
Bso31I	GGTCTC	1 cut(s)	396
Bsp1286I	GDGCHC	2 cut(s)	653, 2380
Bsp13I	TCCGGA	1 cut(s)	1724
Bsp19I	CCATGG	3 cut(s)	1714, 2053, 2080
Bsp68I	TCGCGA	1 cut(s)	482
BspANI	GGCC	7 cut(s)	5, 740, 802, 1012, 1512, 2058, 2085
BspCNI	CTCAG	7 cut(s)	964, 1038, 1627, 2101, 2349, 2486, 2551
BspDI	ATCGAT	1 cut(s)	488
BspEI	TCCGGA	1 cut(s)	1724
BspFNI	CGCG	2 cut(s)	482, 1480
BspHI	TCATGA	4 cut(s)	1386, 1693, 1792, 1828
BspLI	GGNNCC	3 cut(s)	544, 1218, 1611
BspMAI	CTGCAG	1 cut(s)	2350
BspMI	ACCTGC	1 cut(s)	1778
BspPI	GGATC	7 cut(s)	550, 720, 1211, 1224, 1735, 2273, 2533
BspT107I	GGYRCC	1 cut(s)	542
BspTNI	GGTCTC	1 cut(s)	396
BsrBI	CCGCTC	1 cut(s)	288
BsrDI	GCAATG	2 cut(s)	1374, 2330
BsrFI	RCCGGY	2 cut(s)	1905, 2129
BsrI	ACTGG	2 cut(s)	688, 1248
BssAI	RCCGGY	2 cut(s)	1905, 2129
BssECI	CCNNGG	6 cut(s)	654, 1513, 1714, 2053, 2080, 2372
BssNAI	GTATAC	1 cut(s)	1637
BssT1I	CCWWGG	4 cut(s)	654, 1714, 2053, 2080
Bst1107I	GTATAC	1 cut(s)	1637
Bst2UI	CCWGG	1 cut(s)	1559
Bst4CI	ACNGT	8 cut(s)	925, 1027, 1126, 1748, 1955, 1982, 2063, 2584
Bst6I	CTCTTC	5 cut(s)	178, 239, 314, 374, 884
BstC8I	GCNNGC	5 cut(s)	1010, 1484, 1488, 1855, 2287
BstDEI	CTNAG	9 cut(s)	972, 1046, 1614, 2109, 2148, 2215, 2336, 2473, 2538
BstDSI	CCRYGG	4 cut(s)	1513, 1714, 2053, 2080
BstF5I	GGATG	3 cut(s)	1274, 1721, 2270
BstFNI	CGCG	2 cut(s)	482, 1480
BstHHI	GCGC	1 cut(s)	1482
BstMAI	GTCTC	2 cut(s)	334, 396
BstMWI	GCNNNNNNNGC	9 cut(s)	39, 146, 389, 427, 808, 1168, 1448, 1718, 2282
BstNI	CCWGG	1 cut(s)	1559
BstNSI	RCATGY	5 cut(s)	1363, 1429, 2201, 2289, 2456
BstPAI	GACNNNNGTC	2 cut(s)	1953, 1980
BstSCI	CCNGG	1 cut(s)	1557
BstSFI	CTRYAG	1 cut(s)	2346
BstSLI	GKGCMC	1 cut(s)	2380
BstUI	CGCG	2 cut(s)	482, 1480
BstV1I	GCAGC	4 cut(s)	795, 889, 1429, 1880
BstV2I	GAAGAC	1 cut(s)	499
BstX2I	RGATCY	2 cut(s)	1216, 2525
BstXI	CCANNNNNNTGG	2 cut(s)	2099, 2102
BstYI	RGATCY	2 cut(s)	1216, 2525
BstZ17I	GTATAC	1 cut(s)	1637
Bsu15I	ATCGAT	1 cut(s)	488
Bsu36I	CCTNAGG	2 cut(s)	1614, 2215
BsuRI	GGCC	7 cut(s)	5, 740, 802, 1012, 1512, 2058, 2085
BsuTUI	ATCGAT	1 cut(s)	488
BtgI	CCRYGG	4 cut(s)	1513, 1714, 2053, 2080
BtgZI	GCGATG	1 cut(s)	2144
BtsCI	GGATG	3 cut(s)	1274, 1721, 2270
BtsIMutI	CAGTG	1 cut(s)	1023
BtuMI	TCGCGA	1 cut(s)	482
BveI	ACCTGC	1 cut(s)	1778
Cac8I	GCNNGC	5 cut(s)	1010, 1484, 1488, 1855, 2287
CciI	TCATGA	4 cut(s)	1386, 1693, 1792, 1828
CfoI	GCGC	1 cut(s)	1482
Cfr10I	RCCGGY	2 cut(s)	1905, 2129
Cfr13I	GGNCC	1 cut(s)	1609
ClaI	ATCGAT	1 cut(s)	488
Csp6I	GTAC	5 cut(s)	535, 1122, 1195, 2257, 2487
CspAI	ACCGGT	1 cut(s)	2129
CspCI	CAANNNNNGTGG	4 cut(s)	643, 678, 2497, 2532
CviQI	GTAC	5 cut(s)	535, 1122, 1195, 2257, 2487
DdeI	CTNAG	9 cut(s)	972, 1046, 1614, 2109, 2148, 2215, 2336, 2473, 2538
DriI	GACNNNNNGTC	1 cut(s)	476
EaeI	YGGCCR	6 cut(s)	3, 738, 800, 1510, 2056, 2083
Eam1104I	CTCTTC	5 cut(s)	178, 239, 314, 374, 884
Eam1105I	GACNNNNNGTC	1 cut(s)	476
EarI	CTCTTC	5 cut(s)	178, 239, 314, 374, 884
EciI	GGCGGA	4 cut(s)	127, 370, 376, 614
Ecl136II	GAGCTC	1 cut(s)	651
Eco130I	CCWWGG	4 cut(s)	654, 1714, 2053, 2080
Eco24I	GRGCYC	1 cut(s)	653
Eco31I	GGTCTC	1 cut(s)	396
Eco32I	GATATC	1 cut(s)	1410
Eco47I	GGWCC	1 cut(s)	1609
Eco53kI	GAGCTC	1 cut(s)	651
Eco57I	CTGAAG	1 cut(s)	2304
Eco81I	CCTNAGG	2 cut(s)	1614, 2215
EcoICRI	GAGCTC	1 cut(s)	651
EcoRI	GAATTC	2 cut(s)	1370, 2367
EcoRII	CCWGG	1 cut(s)	1557
EcoRV	GATATC	1 cut(s)	1410
EcoT14I	CCWWGG	4 cut(s)	654, 1714, 2053, 2080
EcoT38I	GRGCYC	1 cut(s)	653
ErhI	CCWWGG	4 cut(s)	654, 1714, 2053, 2080
Esp3I	CGTCTC	1 cut(s)	334
FaqI	GGGAC	1 cut(s)	880
FauI	CCCGC	2 cut(s)	113, 2557
FbaI	TGATCA	4 cut(s)	1344, 1921, 1993, 2029
FblI	GTMKAC	1 cut(s)	1636
FokI	GGATG	3 cut(s)	1261, 1708, 2277
FriOI	GRGCYC	1 cut(s)	653
FspBI	CTAG	5 cut(s)	356, 560, 1400, 1629, 1640
GlaI	GCGC	1 cut(s)	1481
GsaI	CCCAGC	4 cut(s)	466, 712, 884, 1383
GsuI	CTGGAG	1 cut(s)	382
HaeIII	GGCC	7 cut(s)	5, 740, 802, 1012, 1512, 2058, 2085
HapII	CCGG	6 cut(s)	207, 501, 532, 1725, 1906, 2130
HhaI	GCGC	1 cut(s)	1482
Hin6I	GCGC	1 cut(s)	1480
HinP1I	GCGC	1 cut(s)	1480
HincII	GTYRAC	2 cut(s)	1626, 2518
HindII	GTYRAC	2 cut(s)	1626, 2518
HindIII	AAGCTT	1 cut(s)	1799
HpaII	CCGG	6 cut(s)	207, 501, 532, 1725, 1906, 2130
Hpy166II	GTNNAC	4 cut(s)	681, 1626, 1637, 2518
Hpy8I	GTNNAC	4 cut(s)	681, 1626, 1637, 2518
Hpy99I	CGWCG	2 cut(s)	482, 1261
HpyCH4III	ACNGT	8 cut(s)	925, 1027, 1126, 1748, 1955, 1982, 2063, 2584
HpyCH4IV	ACGT	1 cut(s)	1197
HpyF10VI	GCNNNNNNNGC	9 cut(s)	39, 146, 389, 427, 808, 1168, 1448, 1718, 2282
HpyF3I	CTNAG	9 cut(s)	972, 1046, 1614, 2109, 2148, 2215, 2336, 2473, 2538
HpySE526I	ACGT	1 cut(s)	1197
HspAI	GCGC	1 cut(s)	1480
Kpn2I	TCCGGA	1 cut(s)	1724
Ksp22I	TGATCA	4 cut(s)	1344, 1921, 1993, 2029
LmnI	GCTCC	8 cut(s)	293, 648, 656, 1135, 1571, 1699, 2364, 2496
Lsp1109I	GCAGC	4 cut(s)	795, 889, 1429, 1880
LweI	GCATC	5 cut(s)	1283, 1405, 1711, 1730, 2167
MaeI	CTAG	5 cut(s)	356, 560, 1400, 1629, 1640
MaeII	ACGT	1 cut(s)	1197
MaeIII	GTNAC	5 cut(s)	1108, 1421, 1955, 1982, 2063
MbiI	CCGCTC	1 cut(s)	288
MfeI	CAATTG	2 cut(s)	1452, 1650
MflI	RGATCY	2 cut(s)	1216, 2525
MhlI	GDGCHC	2 cut(s)	653, 2380
MlsI	TGGCCA	3 cut(s)	802, 2058, 2085
MluCI	AATT	8 cut(s)	795, 859, 1154, 1370, 1452, 1650, 2250, 2367
MluNI	TGGCCA	3 cut(s)	802, 2058, 2085
MlyI	GAGTC	4 cut(s)	465, 513, 1262, 1760
MmeI	TCCRAC	6 cut(s)	1194, 1239, 1549, 1753, 2206, 2571
Mox20I	TGGCCA	3 cut(s)	802, 2058, 2085
MroI	TCCGGA	1 cut(s)	1724
MroXI	GAANNNNTTC	1 cut(s)	726
MscI	TGGCCA	3 cut(s)	802, 2058, 2085
MseI	TTAA	8 cut(s)	1073, 1503, 1577, 1682, 2249, 2253, 2406, 2579
Msp20I	TGGCCA	3 cut(s)	802, 2058, 2085
MspA1I	CMGCKG	1 cut(s)	880
MspI	CCGG	6 cut(s)	207, 501, 532, 1725, 1906, 2130
MspR9I	CCNGG	1 cut(s)	1559
MunI	CAATTG	2 cut(s)	1452, 1650
Mva1269I	GAATGC	2 cut(s)	728, 1838
MvaI	CCWGG	1 cut(s)	1559
MvnI	CGCG	2 cut(s)	482, 1480
MwoI	GCNNNNNNNGC	9 cut(s)	39, 146, 389, 427, 808, 1168, 1448, 1718, 2282
NcoI	CCATGG	3 cut(s)	1714, 2053, 2080
NlaIV	GGNNCC	3 cut(s)	544, 1218, 1611
NmeAIII	GCCGAG	1 cut(s)	589
NmuCI	GTSAC	5 cut(s)	1108, 1421, 1955, 1982, 2063
NruI	TCGCGA	1 cut(s)	482
NspI	RCATGY	5 cut(s)	1363, 1429, 2201, 2289, 2456
PacI	TTAATTAA	1 cut(s)	2253
PaeI	GCATGC	1 cut(s)	2289
PagI	TCATGA	4 cut(s)	1386, 1693, 1792, 1828
PciI	ACATGT	2 cut(s)	1359, 1425
PctI	GAATGC	2 cut(s)	728, 1838
PdmI	GAANNNNTTC	1 cut(s)	726
PfeI	GAWTC	7 cut(s)	490, 643, 1262, 1589, 1808, 1844, 2568
PflMI	CCANNNNNTGG	2 cut(s)	2132, 2179
PinAI	ACCGGT	1 cut(s)	2129
PleI	GAGTC	4 cut(s)	465, 512, 1261, 1760
PpsI	GAGTC	4 cut(s)	465, 512, 1261, 1760
PscI	ACATGT	2 cut(s)	1359, 1425
PshAI	GACNNNNGTC	2 cut(s)	1953, 1980
PshBI	ATTAAT	1 cut(s)	1577
Psp124BI	GAGCTC	1 cut(s)	653
Psp6I	CCWGG	1 cut(s)	1557
PspFI	CCCAGC	4 cut(s)	462, 708, 880, 1379
PspGI	CCWGG	1 cut(s)	1557
PspN4I	GGNNCC	3 cut(s)	544, 1218, 1611
PspPI	GGNCC	1 cut(s)	1609
PstI	CTGCAG	1 cut(s)	2350
PsuI	RGATCY	2 cut(s)	1216, 2525
PvuII	CAGCTG	1 cut(s)	880
RruI	TCGCGA	1 cut(s)	482
RsaI	GTAC	5 cut(s)	536, 1123, 1196, 2258, 2488
RsaNI	GTAC	5 cut(s)	535, 1122, 1195, 2257, 2487
SacI	GAGCTC	1 cut(s)	653
SaqAI	TTAA	8 cut(s)	1073, 1503, 1577, 1682, 2249, 2253, 2406, 2579
Sau96I	GGNCC	1 cut(s)	1609
SchI	GAGTC	4 cut(s)	465, 513, 1262, 1760
ScrFI	CCNGG	1 cut(s)	1559
SduI	GDGCHC	2 cut(s)	653, 2380
SfaNI	GCATC	5 cut(s)	1283, 1405, 1711, 1730, 2167
SfcI	CTRYAG	1 cut(s)	2346
SinI	GGWCC	1 cut(s)	1609
SmlI	CTYRAG	2 cut(s)	1595, 1802
SmoI	CTYRAG	2 cut(s)	1595, 1802
SpeI	ACTAGT	1 cut(s)	1639
SphI	GCATGC	1 cut(s)	2289
Sse9I	AATT	8 cut(s)	795, 859, 1154, 1370, 1452, 1650, 2250, 2367
SspI	AATATT	1 cut(s)	2190
SspMI	CTAG	5 cut(s)	356, 560, 1400, 1629, 1640
SstI	GAGCTC	1 cut(s)	653
StyD4I	CCNGG	1 cut(s)	1557
StyI	CCWWGG	4 cut(s)	654, 1714, 2053, 2080
TaaI	ACNGT	8 cut(s)	925, 1027, 1126, 1748, 1955, 1982, 2063, 2584
TaiI	ACGT	1 cut(s)	1200
TaqI	TCGA	4 cut(s)	158, 488, 854, 2291
TasI	AATT	8 cut(s)	795, 859, 1154, 1370, 1452, 1650, 2250, 2367
TatI	WGTACW	2 cut(s)	1121, 2256
TfiI	GAWTC	7 cut(s)	490, 643, 1262, 1589, 1808, 1844, 2568
Tru1I	TTAA	8 cut(s)	1073, 1503, 1577, 1682, 2249, 2253, 2406, 2579
Tru9I	TTAA	8 cut(s)	1073, 1503, 1577, 1682, 2249, 2253, 2406, 2579
TscAI	CASTG	1 cut(s)	1030
TseFI	GTSAC	5 cut(s)	1108, 1421, 1955, 1982, 2063
TseI	GCWGC	4 cut(s)	808, 877, 1442, 1893
Tsp45I	GTSAC	5 cut(s)	1108, 1421, 1955, 1982, 2063
TspGWI	ACGGA	4 cut(s)	720, 804, 1267, 1336
TspRI	CASTG	1 cut(s)	1030
Van91I	CCANNNNNTGG	2 cut(s)	2132, 2179
VpaK11BI	GGWCC	1 cut(s)	1609
VspI	ATTAAT	1 cut(s)	1577
XapI	RAATTY	3 cut(s)	795, 1370, 2367
XceI	RCATGY	5 cut(s)	1363, 1429, 2201, 2289, 2456
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1000, 1874, 2099
XmiI	GTMKAC	1 cut(s)	1636
XmnI	GAANNNNTTC	1 cut(s)	726
XspI	CTAG	5 cut(s)	356, 560, 1400, 1629, 1640

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.