Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0016038

Physical Location & Seq

Genomic Coordinates Reverse (-)

24008087 .. 24010100

Gene Structure 2014 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000023453

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1749 bp

ATGCAGAGAAGACTACCGTTCTTAGTTTGCAACCGTAACCATGTAATCATCTCTACCCCATTTTTCCGCCAACTATCCCTTTCATCCTTCCCGCCAAATTCACCGGCTTTAACATCTCTATGCTCCAACAGTCAACTGAGAGAAGCCCTGGTGGAAATGACCGTTCAAGGCCTTGACGTGAAGTTCGAAGGCTACTACACGCTCTTGAACGAGTGTGTGAGCAGAAGGGCCTTGAGAGAAGGTCAAAGAGTCCATGCCCACATGATCAAAACCTGTTATCTTCCGCCGGTGCACCTCCGGACCCGGCTCATTGTTTTCTACAACAGCTGTGATTGTCTGGGCGATGCACGCCGCGTGCTCGATGAAATGCCTCTGAGAAATGTGGTGTCGTGGACGGCTATGATTTCGGCTTATTCTAAGAGAGGGTACGCCTCCGAAGCCGCCGATCTTTTTCTACAGATGTTAAGATCAGATGAGGGACCTAATGAGTTCACGTTTGCAACCGTACTTACTTCATGTACTGGTTCTTGGGGGTTTGACTTAGGGAGGCAAATCCATTCTCTTATAATAAAAACAAAGTATGAATCGCATATATATGTTGGCAGCTCGCTTCTTGACATGTATGCCAAAGCTGGTAGAATGCTTGAAGCGAGACGAGTTTTTGACAGCTTGCCTGAAAGGGATGTTGTTTCTTGTACAGCTATAATCTCTGGCTATGCCCAGCAGGGTCTTGATGAAGAGGCTTTGGAGCTGTTCCGGCAGTTGCAGAGGGAAGGAATGACTGCGAACTATGTCACTTATGCCAGTGTTTTGACGGCATTATCAGGGCTTGCTGCTTTGGACCTTGGCAGGCAAGTTCACAACCATGTGCTTCGTTGTGAAGTGCCTTCATATGTGGTTCTTCAGAACTCCCTGATTGATATGTACTCAAAATGTGGAAAGCTAAGTTACTCAAGACGAGTTTTTGATACCATGCCCGAGAGAACTGTTATCTCATGGAATGCAATGCTAGTAGGGTATAGTAAACATGGACTGGGAGAAGAGGTGGTTAAGCTTTTCAAGCTAATGAGAGAAGAAAATCAAATCAGACCAGACAGTGTCACTTTTTTGGCTGTTTTATCTGGTTGCAGTCATGGAGGAATGGAAGATAGAGGGATGGAAATCTTTTATGAGATGGCGAGAGGGGACAATGGAATTGAGCCAGAGCTTGAGCATTATGGATGTGTTGTTGATCTGCTTGGCCGTTCTGGTCGAGTTGAAGAAGCCTTTGAATTCATTAAAAAGATGCCTTCTGAGCCAACTGCTGCTATATGGGGTTCCCTTTTAGGTGCTTGTAGAGTTCATTCCAATGTTAAAATCGGTGAATTTGTGGTCCTTCATACTTTTCATGCAAGTGATCGCTCCCATCCCAGAAGGGAAGAGGTATCTGCAAAGGTGAGAGAGATATCAGCAAAGTTAAAGGAAGTTGGTTACTCTCCTGATATGGGTTGTGTTTTATATGATGTGGATGAGGAGCAGAAGGAGAAGATACTTCTAGGCCACAGTGAAAAGATGGCTTTGGCTTTTGGGCTTATTGCTACTCCTGAAGGTGTGCCAGTCCGTGTGATAAAAAATCTTCGCATTTGTGTTGATTGCCATAATTTTGGGAAACTTGTCTCGAAGATATATGGAAGAGAAGTGTCTTTGAGAGATAAAAACCGGTTTCATCACATGGTTGGAGGGATTTGCTCTTGTGGAGATTACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

583

Amino Acids

65.59

Weight (kDa)

7.25

Isoelectric Point (pI)

50.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	126 - 173	1.3e-09	PPR repeat family
PPR	PF01535	129 - 157	8.3e-07	PPR repeat
PPR_2	PF13041	227 - 274	1.2e-08	PPR repeat family
PPR	PF01535	230 - 259	5.7e-06	PPR repeat
PPR_2	PF13041	329 - 377	1.8e-09	PPR repeat family
PPR	PF01535	331 - 360	1.7e-07	PPR repeat
DYW_deaminase	PF14432	490 - 582	1.7e-38	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016038)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13770 AT3G13770
fragaria_vesca	FvH4_6g22980 FvH4_6g22980
malus_domestica	MD14G1064300.v1.1
prunus_persica	Prupe.7G069900_v2.0.a1
pyrus_communis	pycom14g05200
rosa_chinensis	RchiOBHm_Chr3g0480771
rosa_laevigata	RLG00000023453
rosa_multiflora	Rmu_sc0003902.1_g000010 Rmu_sc0007944.1_g000002
rosa_roxburghii	Rroxscaffold_6G00401080
rosa_rugosa	Rorug03G0186300
rosa_samantha	Rh3DG263400
rosa_wichuraiana	Rw3G021300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	566
AccII	CGCG	1 cut(s)	354
AccIII	TCCGGA	1 cut(s)	297
AciI	CCGC	5 cut(s)	67, 92, 284, 352, 441
AcoI	YGGCCR	1 cut(s)	1240
AcsI	RAATTY	3 cut(s)	97, 1271, 1364
AcuI	CTGAAG	2 cut(s)	887, 1605
AfaI	GTAC	5 cut(s)	428, 507, 520, 697, 926
AfiI	CCNNNNNNNGG	1 cut(s)	1484
AflIII	ACRYGT	1 cut(s)	618
AgeI	ACCGGT	1 cut(s)	1698
AgsI	TTSAA	6 cut(s)	167, 208, 647, 1060, 1259, 1271
AjiI	CACGTC	1 cut(s)	178
AjnI	CCWGG	1 cut(s)	147
Alw21I	GWGCWC	2 cut(s)	294, 360
Alw26I	GTCTC	2 cut(s)	646, 1660
Alw44I	GTGCAC	1 cut(s)	290
Ama87I	CYCGRG	1 cut(s)	977
Aor13HI	TCCGGA	1 cut(s)	297
AoxI	GGCC	4 cut(s)	169, 228, 1240, 1537
ApaLI	GTGCAC	1 cut(s)	290
ApeKI	GCWGC	3 cut(s)	603, 833, 1304
ApoI	RAATTY	3 cut(s)	97, 1271, 1364
ArsI	GACNNNNNNTTYG	2 cut(s)	167, 199
AsiGI	ACCGGT	1 cut(s)	1698
AspS9I	GGNCC	5 cut(s)	228, 300, 479, 841, 1372
AsuC2I	CCSGG	1 cut(s)	304
AsuHPI	GGTGA	3 cut(s)	93, 1373, 1447
AsuII	TTCGAA	1 cut(s)	186
AvaI	CYCGRG	1 cut(s)	977
AvaII	GGWCC	4 cut(s)	300, 479, 841, 1372
BaeGI	GKGCMC	1 cut(s)	294
BbsI	GAAGAC	1 cut(s)	16
Bbv12I	GWGCWC	2 cut(s)	294, 360
BbvI	GCAGC	3 cut(s)	615, 820, 1291
BccI	CCATC	4 cut(s)	1150, 1168, 1413, 1546
BceAI	ACGGC	3 cut(s)	411, 831, 1227
BciT130I	CCWGG	1 cut(s)	149
BclI	TGATCA	1 cut(s)	264
BcnI	CCSGG	1 cut(s)	304
BcoDI	GTCTC	2 cut(s)	646, 1660
BfaI	CTAG	2 cut(s)	1010, 1535
BfmI	CTRYAG	1 cut(s)	455
BisI	GCNGC	5 cut(s)	352, 441, 604, 834, 1305
BlsI	GCNGC	5 cut(s)	353, 442, 605, 835, 1306
Bme1390I	CCNGG	2 cut(s)	149, 304
Bme18I	GGWCC	4 cut(s)	300, 479, 841, 1372
BmeT110I	CYCGRG	1 cut(s)	977
BmgBI	CACGTC	1 cut(s)	178
BmgT120I	GGNCC	5 cut(s)	228, 300, 479, 841, 1372
BmiI	GGNNCC	3 cut(s)	302, 480, 1318
BmrFI	CCNGG	2 cut(s)	149, 304
BmrI	ACTGGG	1 cut(s)	1043
BmsI	GCATC	2 cut(s)	334, 1275
BmuI	ACTGGG	1 cut(s)	1043
BpiI	GAAGAC	1 cut(s)	16
Bpu14I	TTCGAA	1 cut(s)	186
BpuEI	CTTGAG	3 cut(s)	253, 937, 1229
BpuMI	CCSGG	1 cut(s)	304
BsaBI	GATNNNNATC	1 cut(s)	1160
BsaJI	CCNNGG	2 cut(s)	147, 844
BsaWI	WCCGGW	2 cut(s)	297, 1698
BsaXI	ACNNNNNCTCC	2 cut(s)	1029, 1059
Bsc4I	CCNNNNNNNGG	1 cut(s)	1484
Bse118I	RCCGGY	3 cut(s)	103, 286, 1698
Bse1I	ACTGG	5 cut(s)	526, 804, 1038, 1595, 1748
Bse3DI	GCAATG	1 cut(s)	1011
Bse8I	GATNNNNATC	1 cut(s)	1160
BseAI	TCCGGA	1 cut(s)	297
BseBI	CCWGG	1 cut(s)	149
BseDI	CCNNGG	2 cut(s)	147, 844
BseGI	GGATG	6 cut(s)	83, 688, 1161, 1226, 1405, 1513
BseJI	GATNNNNATC	1 cut(s)	1160
BseLI	CCNNNNNNNGG	1 cut(s)	1484
BseMI	GCAATG	1 cut(s)	1011
BseMII	CTCAG	3 cut(s)	128, 365, 1284
BseNI	ACTGG	5 cut(s)	526, 804, 1038, 1595, 1748
BseRI	GAGGAG	1 cut(s)	1526
BseSI	GKGCMC	1 cut(s)	294
BseXI	GCAGC	3 cut(s)	615, 820, 1291
BseYI	CCCAGC	1 cut(s)	720
Bsh1236I	CGCG	1 cut(s)	354
BshFI	GGCC	4 cut(s)	171, 230, 1242, 1539
BshTI	ACCGGT	1 cut(s)	1698
BsiHKAI	GWGCWC	2 cut(s)	294, 360
BsiHKCI	CYCGRG	1 cut(s)	977
BsiSI	CCGG	6 cut(s)	104, 287, 298, 304, 757, 1699
BslFI	GGGAC	2 cut(s)	492, 1199
BslI	CCNNNNNNNGG	1 cut(s)	1484
BsmAI	GTCTC	2 cut(s)	646, 1660
BsmBI	CGTCTC	1 cut(s)	646
BsmFI	GGGAC	2 cut(s)	492, 1199
BsmI	GAATGC	2 cut(s)	645, 1006
BsnI	GGCC	4 cut(s)	171, 230, 1242, 1539
BsoBI	CYCGRG	1 cut(s)	977
Bsp119I	TTCGAA	1 cut(s)	186
Bsp1286I	GDGCHC	2 cut(s)	294, 360
Bsp13I	TCCGGA	1 cut(s)	297
Bsp1407I	TGTACA	1 cut(s)	695
Bsp143I	GATC	5 cut(s)	264, 445, 467, 1231, 1396
BspACI	CCGC	5 cut(s)	67, 92, 284, 352, 441
BspANI	GGCC	4 cut(s)	171, 230, 1242, 1539
BspCNI	CTCAG	3 cut(s)	129, 366, 1285
BspEI	TCCGGA	1 cut(s)	297
BspFNI	CGCG	1 cut(s)	354
BspLI	GGNNCC	3 cut(s)	302, 480, 1318
BspT104I	TTCGAA	1 cut(s)	186
BsrDI	GCAATG	1 cut(s)	1011
BsrFI	RCCGGY	3 cut(s)	103, 286, 1698
BsrGI	TGTACA	1 cut(s)	695
BsrI	ACTGG	5 cut(s)	526, 804, 1038, 1595, 1748
BssAI	RCCGGY	3 cut(s)	103, 286, 1698
BssECI	CCNNGG	2 cut(s)	147, 844
BssMI	GATC	5 cut(s)	264, 445, 467, 1231, 1396
BssT1I	CCWWGG	1 cut(s)	844
Bst2UI	CCWGG	1 cut(s)	149
Bst4CI	ACNGT	8 cut(s)	18, 35, 131, 163, 505, 988, 1097, 1544
Bst6I	CTCTTC	4 cut(s)	732, 1035, 1413, 1666
BstAUI	TGTACA	1 cut(s)	695
BstBI	TTCGAA	1 cut(s)	186
BstC8I	GCNNGC	6 cut(s)	349, 356, 608, 671, 831, 851
BstDEI	CTNAG	7 cut(s)	22, 137, 374, 417, 541, 944, 1293
BstF5I	GGATG	6 cut(s)	83, 688, 1161, 1226, 1405, 1513
BstFNI	CGCG	1 cut(s)	354
BstKTI	GATC	5 cut(s)	267, 448, 470, 1234, 1399
BstMAI	GTCTC	2 cut(s)	646, 1660
BstMBI	GATC	5 cut(s)	264, 445, 467, 1231, 1396
BstMWI	GCNNNNNNNGC	5 cut(s)	348, 437, 757, 1060, 1294
BstNI	CCWGG	1 cut(s)	149
BstNSI	RCATGY	1 cut(s)	622
BstSCI	CCNGG	2 cut(s)	147, 302
BstSFI	CTRYAG	1 cut(s)	455
BstSLI	GKGCMC	1 cut(s)	294
BstUI	CGCG	1 cut(s)	354
BstV1I	GCAGC	3 cut(s)	615, 820, 1291
BstV2I	GAAGAC	1 cut(s)	16
BstXI	CCANNNNNNTGG	1 cut(s)	1643
BsuRI	GGCC	4 cut(s)	171, 230, 1242, 1539
BtgZI	GCGATG	1 cut(s)	357
BtrI	CACGTC	1 cut(s)	178
BtsCI	GGATG	6 cut(s)	83, 688, 1161, 1226, 1405, 1513
BtsIMutI	CAGTG	3 cut(s)	811, 1102, 1549
Cac8I	GCNNGC	6 cut(s)	349, 356, 608, 671, 831, 851
Cfr10I	RCCGGY	3 cut(s)	103, 286, 1698
Cfr13I	GGNCC	5 cut(s)	228, 300, 479, 841, 1372
Csp6I	GTAC	5 cut(s)	427, 506, 519, 696, 925
CspAI	ACCGGT	1 cut(s)	1698
CviQI	GTAC	5 cut(s)	427, 506, 519, 696, 925
DdeI	CTNAG	7 cut(s)	22, 137, 374, 417, 541, 944, 1293
DpnI	GATC	5 cut(s)	266, 447, 469, 1233, 1398
DpnII	GATC	5 cut(s)	264, 445, 467, 1231, 1396
EaeI	YGGCCR	1 cut(s)	1240
Eam1104I	CTCTTC	4 cut(s)	732, 1035, 1413, 1666
EarI	CTCTTC	4 cut(s)	732, 1035, 1413, 1666
EciI	GGCGGA	2 cut(s)	56, 273
Eco130I	CCWWGG	1 cut(s)	844
Eco147I	AGGCCT	1 cut(s)	171
Eco32I	GATATC	1 cut(s)	1446
Eco47I	GGWCC	4 cut(s)	300, 479, 841, 1372
Eco57I	CTGAAG	2 cut(s)	887, 1605
Eco88I	CYCGRG	1 cut(s)	977
EcoO109I	RGGNCCY	2 cut(s)	228, 479
EcoRI	GAATTC	1 cut(s)	1271
EcoRII	CCWGG	1 cut(s)	147
EcoRV	GATATC	1 cut(s)	1446
EcoT14I	CCWWGG	1 cut(s)	844
ErhI	CCWWGG	1 cut(s)	844
Esp3I	CGTCTC	1 cut(s)	646
FaqI	GGGAC	2 cut(s)	492, 1199
FauI	CCCGC	1 cut(s)	99
FauNDI	CATATG	1 cut(s)	892
FbaI	TGATCA	1 cut(s)	264
Fnu4HI	GCNGC	5 cut(s)	352, 441, 604, 834, 1305
FokI	GGATG	6 cut(s)	70, 695, 1168, 1233, 1392, 1520
Fsp4HI	GCNGC	5 cut(s)	352, 441, 604, 834, 1305
FspBI	CTAG	2 cut(s)	1010, 1535
GluI	GCNGC	5 cut(s)	352, 441, 604, 834, 1305
GsaI	CCCAGC	1 cut(s)	724
HaeIII	GGCC	4 cut(s)	171, 230, 1242, 1539
HapII	CCGG	6 cut(s)	104, 287, 298, 304, 757, 1699
HincII	GTYRAC	1 cut(s)	134
HindII	GTYRAC	1 cut(s)	134
HindIII	AAGCTT	1 cut(s)	1052
HinfI	GANTC	2 cut(s)	249, 584
HpaII	CCGG	6 cut(s)	104, 287, 298, 304, 757, 1699
HphI	GGTGA	3 cut(s)	93, 1373, 1447
Hpy166II	GTNNAC	6 cut(s)	134, 292, 393, 492, 859, 1025
Hpy188I	TCNGA	6 cut(s)	375, 436, 472, 906, 1088, 1294
Hpy188III	TCNNGA	8 cut(s)	205, 298, 614, 731, 954, 1478, 1583, 1657
Hpy8I	GTNNAC	6 cut(s)	134, 292, 393, 492, 859, 1025
HpyCH4III	ACNGT	8 cut(s)	18, 35, 131, 163, 505, 988, 1097, 1544
HpyCH4IV	ACGT	2 cut(s)	177, 494
HpyF10VI	GCNNNNNNNGC	5 cut(s)	348, 437, 757, 1060, 1294
HpyF3I	CTNAG	7 cut(s)	22, 137, 374, 417, 541, 944, 1293
HpySE526I	ACGT	2 cut(s)	177, 494
Kpn2I	TCCGGA	1 cut(s)	297
Ksp22I	TGATCA	1 cut(s)	264
Kzo9I	GATC	5 cut(s)	264, 445, 467, 1231, 1396
LmnI	GCTCC	4 cut(s)	128, 748, 1406, 1513
Lsp1109I	GCAGC	3 cut(s)	615, 820, 1291
LweI	GCATC	2 cut(s)	334, 1275
MaeI	CTAG	2 cut(s)	1010, 1535
MaeII	ACGT	2 cut(s)	177, 494
MaeIII	GTNAC	5 cut(s)	35, 793, 947, 1099, 1469
MalI	GATC	5 cut(s)	266, 447, 469, 1233, 1398
MboI	GATC	5 cut(s)	264, 445, 467, 1231, 1396
MhlI	GDGCHC	2 cut(s)	294, 360
MluCI	AATT	5 cut(s)	97, 1194, 1271, 1364, 1639
MlyI	GAGTC	1 cut(s)	258
MmeI	TCCRAC	2 cut(s)	150, 1696
MroI	TCCGGA	1 cut(s)	297
MseI	TTAA	6 cut(s)	110, 464, 1050, 1278, 1353, 1457
MslI	CAYNNNNRTG	5 cut(s)	118, 594, 864, 1347, 1392
MspA1I	CMGCKG	1 cut(s)	327
MspI	CCGG	6 cut(s)	104, 287, 298, 304, 757, 1699
MspR9I	CCNGG	2 cut(s)	149, 304
Mva1269I	GAATGC	2 cut(s)	645, 1006
MvaI	CCWGG	1 cut(s)	149
MvnI	CGCG	1 cut(s)	354
MwoI	GCNNNNNNNGC	5 cut(s)	348, 437, 757, 1060, 1294
NciI	CCSGG	1 cut(s)	304
NdeI	CATATG	1 cut(s)	892
NdeII	GATC	5 cut(s)	264, 445, 467, 1231, 1396
NlaIV	GGNNCC	3 cut(s)	302, 480, 1318
NmuCI	GTSAC	2 cut(s)	793, 1099
NspI	RCATGY	1 cut(s)	622
NspV	TTCGAA	1 cut(s)	186
PceI	AGGCCT	1 cut(s)	171
PciI	ACATGT	1 cut(s)	618
PcsI	WCGNNNNNNNCGW	1 cut(s)	183
PctI	GAATGC	2 cut(s)	645, 1006
PfeI	GAWTC	1 cut(s)	584
PflFI	GACNNNGTC	1 cut(s)	1097
PinAI	ACCGGT	1 cut(s)	1698
PkrI	GCNGC	5 cut(s)	353, 442, 605, 835, 1306
PleI	GAGTC	1 cut(s)	257
PpsI	GAGTC	1 cut(s)	257
PpuMI	RGGWCCY	1 cut(s)	479
PscI	ACATGT	1 cut(s)	618
PsiI	TTATAA	1 cut(s)	566
Psp5II	RGGWCCY	1 cut(s)	479
Psp6I	CCWGG	1 cut(s)	147
PspFI	CCCAGC	1 cut(s)	720
PspGI	CCWGG	1 cut(s)	147
PspN4I	GGNNCC	3 cut(s)	302, 480, 1318
PspPI	GGNCC	5 cut(s)	228, 300, 479, 841, 1372
PspPPI	RGGWCCY	1 cut(s)	479
PsyI	GACNNNGTC	1 cut(s)	1097
PvuII	CAGCTG	1 cut(s)	327
RsaI	GTAC	5 cut(s)	428, 507, 520, 697, 926
RsaNI	GTAC	5 cut(s)	427, 506, 519, 696, 925
RseI	CAYNNNNRTG	5 cut(s)	118, 594, 864, 1347, 1392
SaqAI	TTAA	6 cut(s)	110, 464, 1050, 1278, 1353, 1457
SatI	GCNGC	5 cut(s)	352, 441, 604, 834, 1305
Sau3AI	GATC	5 cut(s)	264, 445, 467, 1231, 1396
Sau96I	GGNCC	5 cut(s)	228, 300, 479, 841, 1372
SchI	GAGTC	1 cut(s)	258
ScrFI	CCNGG	2 cut(s)	149, 304
SduI	GDGCHC	2 cut(s)	294, 360
SfaNI	GCATC	2 cut(s)	334, 1275
SfcI	CTRYAG	1 cut(s)	455
SfuI	TTCGAA	1 cut(s)	186
SgrAI	CRCCGGYG	1 cut(s)	286
SinI	GGWCC	4 cut(s)	300, 479, 841, 1372
SmiMI	CAYNNNNRTG	5 cut(s)	118, 594, 864, 1347, 1392
SmlI	CTYRAG	3 cut(s)	232, 952, 1208
SmoI	CTYRAG	3 cut(s)	232, 952, 1208
Sse9I	AATT	5 cut(s)	97, 1194, 1271, 1364, 1639
SseBI	AGGCCT	1 cut(s)	171
SsiI	CCGC	5 cut(s)	67, 92, 284, 352, 441
SspMI	CTAG	2 cut(s)	1010, 1535
StuI	AGGCCT	1 cut(s)	171
StyD4I	CCNGG	2 cut(s)	147, 302
StyI	CCWWGG	1 cut(s)	844
TaaI	ACNGT	8 cut(s)	18, 35, 131, 163, 505, 988, 1097, 1544
TaiI	ACGT	2 cut(s)	180, 497
TaqI	TCGA	4 cut(s)	186, 360, 1252, 1658
TasI	AATT	5 cut(s)	97, 1194, 1271, 1364, 1639
TatI	WGTACW	3 cut(s)	518, 695, 924
TauI	GCSGC	2 cut(s)	354, 443
TfiI	GAWTC	1 cut(s)	584
Tru1I	TTAA	6 cut(s)	110, 464, 1050, 1278, 1353, 1457
Tru9I	TTAA	6 cut(s)	110, 464, 1050, 1278, 1353, 1457
TscAI	CASTG	3 cut(s)	811, 1102, 1549
TseFI	GTSAC	2 cut(s)	793, 1099
TseI	GCWGC	3 cut(s)	603, 833, 1304
Tsp45I	GTSAC	2 cut(s)	793, 1099
TspGWI	ACGGA	1 cut(s)	1589
TspRI	CASTG	3 cut(s)	811, 1102, 1549
Tth111I	GACNNNGTC	1 cut(s)	1097
VneI	GTGCAC	1 cut(s)	290
VpaK11BI	GGWCC	4 cut(s)	300, 479, 841, 1372
XapI	RAATTY	3 cut(s)	97, 1271, 1364
XceI	RCATGY	1 cut(s)	622
XspI	CTAG	2 cut(s)	1010, 1535

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.