Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0009798

Physical Location & Seq

Genomic Coordinates Reverse (-)

8116425 .. 8119888

Gene Structure 3464 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000027067

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1803 bp

ATGTCCAAGCAGACCTACAGAGTGTGCTTCTGCTTCCGGCGCCGCTTCCGCCTCGCCGTATCGGAGGCTCCGCCGGATATCAAGTCCCTGTTTGACCAGTACTCCGAGAATGGCGTCATGACCCTCGATCAGTTCCACCGCTTCCTGACGGAGGTCCAGAAGGAGGATCTCACCAAGGAGGAGGCACAGGTGTTACTGGATCAGAGCCTCAACGACTTCAAGCACCTCAATATCTTCCACCGCAAGATTCTCAACCTCGAGGCCTTCTTCAAGTACCTCTTCAGTGACAATAATCCCCCTATCTCCACCAAGGTGCACCATGATATGAATGCGCCTTTGTCGCATTATTACATACACACAGGACACAATTCCTATTTGACCGGAAATCAGCTGAGCAGTGACTGCAGTGATGTGCCGATTATACAAGCGCTACATAGAGGGGTGAGGGTGATTGAACTTGATATATGGCCCAATTCGAATAAAGATGATGTGGATGTACTTCATGGAGGGACATTGACTGCTCCAGTGTCACTTATCAAGTGCTTCAAGTCTATAAAAGAACATGCATTTGTTGCCTCTGAGTACCCTGTTGTAATTACCTTGGAGGATCATCTAACCCCTGATCTTCAGGCTAAAGTGGCTGAGATGATTACTCAAACATTTGGAGAGGTGCTGTTTTCTCCTCCGGGATCCGAGTGTCTTAAAGAGTTTCCGTCCCCAGAATCACTAAAGAGAAGGATTATTATATCAACCAAACCACCTTCAGAATATCTTGAGGCTAAAGCTGCTGCTGAAAAAGCTGCCGCAAAAGCTGCCGCAGCTGGAAATGACTTAAAGAGGGGAGCGAGTTTAGCTCCTGATGAGGAAGCTTGGGGTAGAGAAGTCCCGGACCAAAAAGGAGGAGCAGTTGCAGAAGATGACAAGAATGAATTGGATGAAAATAATAGCAATGAGGAGGAAGATGTTGAGGAGTCCAAGTGCCCACAAAATGAGGCACCTGAATATAAGCGTTTAATTGCCATTCATGCTGGGAAACCCAAAGGTGGATTAGTGGAGTGTCTCAAAGTGGATCCTAATAAAGTGCGGCGTCTTAGCTTAAGTGAGCAACAGCTTGAAAAGGCATCAGTAACTCATGGAAAAGAGATAGTCAGATTTACCCAGAGGAATATTCTGAGGGTATACCCAAAGGGTATACGTGTGGACTCATCAAATTATAACCCAATGATTGGGTGGTCACATGGTGCTCAAATGGTTGCATTTAATATGCAGGGGTATGGAAGATCACTGTGGGTGATGCAAGGAATGTTTAGAGCTAATGGTGGATGCGGCTATGTGAAAAAACCCGATTTTCTGTTGACTACTGGTCCAAATAATGAGGTCTTTGATCCTCAACATAAGTCATCAGTTAAAAAAACTTTGAAGGTGAAAGTCTATATGGGAGAAGGGTGGTATTATGATTTCAAGCACACGCATTTTGATGCATATTCACCTCCTGATTTTTATGCAAGGGTAGGTATTGCTGGAGTTGCTGCAGATACTGTAATGAAGAAAACAAAAACCCTAGAGGATGACTGGATTCCTGCTTGGGACGAAGCATTTGAATTCCCATTAACTTGTCCAGAACTGGCTGTGATTCGCATTGAAGTTCACGAGTATGACATGTCAGAAAAGGATGACTTTGGAGGGCAAACAAGTCTACCCCTATCTGAGCTGAAAAAGGGCATCCGAGCAGTTCCCTTACACGACCGCAAGGGAGAGAAGTACAAATCCGTAAAGCTTCTTATGCACTTCGATTTAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004620 GO:0004629 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0007049 GO:0007275 GO:0008081 GO:0008150 GO:0009553 GO:0009555 GO:0009556 GO:0009605 GO:0009607 GO:0009617 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009908 GO:0009987 GO:0010600 GO:0010601 GO:0010817 GO:0016020 GO:0016298 GO:0016787 GO:0016788 GO:0019222 GO:0019953 GO:0022402 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032350 GO:0032352 GO:0032501 GO:0032502 GO:0034293 GO:0042578 GO:0042742 GO:0043207 GO:0043934 GO:0044464 GO:0044703 GO:0046885 GO:0046886 GO:0048229 GO:0048236 GO:0048367 GO:0048437 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051321 GO:0051704 GO:0051707 GO:0061458 GO:0065007 GO:0065008 GO:0071944 GO:0090354 GO:0090355 GO:0090567 GO:0098542 GO:0099402 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04020 ko04070 ko04919 ko04933 map00562 map01100 map04020 map04070 map04919 map04933

Pfam Domains

Protein Families

C2 EF-hand_like PI-PLC-X PI-PLC-Y

Protein Analysis

601

Amino Acids

67.8

Weight (kDa)

6.05

Isoelectric Point (pI)

41.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PI-PLC-X	PF00388	109 - 252	2.8e-53	Phosphatidylinositol-specific phospholipase C, X domain
PI-PLC-Y	PF00387	364 - 450	1.4e-29	Phosphatidylinositol-specific phospholipase C, Y domain
C2	PF00168	472 - 574	3.9e-12	C2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009798)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G08510 AT3G08510 AT3G08510 AT3G08510 AT3G55940
fragaria_vesca	FvH4_7g24471 FvH4_7g24471
malus_domestica	MD01G1153000.v1.1 MD07G1221900.v1.1
prunus_persica	Prupe.2G250100_v2.0.a1
pyrus_communis	pycom01g17060 pycom07g20040
rosa_chinensis	RchiOBHm_Chr1g0370231
rosa_laevigata	RLG00000027067
rosa_multiflora	Rmu_sc0017405.1_g000001 Rmu_sc0030456.1_g000001
rosa_roxburghii	Rroxscaffold_4G00286730
rosa_rugosa	Rorug01G0354700 Rorug01G0354800
rosa_samantha	Rh1AG363500
rosa_wichuraiana	Rw1G031990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1215
AbsI	CCTCGAGG	1 cut(s)	257
AccB1I	GGYRCC	2 cut(s)	39, 994
AccB7I	CCANNNNNTGG	1 cut(s)	1226
AccI	GTMKAC	3 cut(s)	1179, 1192, 1696
AclWI	GGATC	8 cut(s)	174, 207, 615, 684, 697, 1064, 1077, 1379
AcsI	RAATTY	1 cut(s)	1601
AcuI	CTGAAG	3 cut(s)	265, 611, 747
AcyI	GRCGYC	3 cut(s)	40, 114, 1087
AdeI	CACNNNGTG	1 cut(s)	1241
AfaI	GTAC	5 cut(s)	101, 275, 498, 584, 1763
AfeI	AGCGCT	1 cut(s)	429
AfiI	CCNNNNNNNGG	4 cut(s)	151, 163, 1043, 1226
AflII	CTTAAG	1 cut(s)	1096
AflIII	ACRYGT	2 cut(s)	1195, 1659
AgsI	TTSAA	9 cut(s)	220, 271, 455, 547, 1115, 1420, 1462, 1601, 1643
AhdI	GACNNNNNGTC	1 cut(s)	1362
AleI	CACNNNNGTG	1 cut(s)	311
Alw21I	GWGCWC	2 cut(s)	318, 1246
Alw26I	GTCTC	1 cut(s)	1064
Alw44I	GTGCAC	1 cut(s)	314
AlwI	GGATC	8 cut(s)	174, 207, 615, 684, 697, 1064, 1077, 1379
AlwNI	CAGNNNCTG	2 cut(s)	402, 1538
Ama87I	CYCGRG	1 cut(s)	257
Aor51HI	AGCGCT	1 cut(s)	429
AoxI	GGCC	2 cut(s)	261, 467
ApaLI	GTGCAC	1 cut(s)	314
ApeKI	GCWGC	6 cut(s)	785, 788, 800, 812, 818, 1529
ApoI	RAATTY	1 cut(s)	1601
ArsI	GACNNNNNNTTYG	2 cut(s)	1580, 1612
AspLEI	GCGC	3 cut(s)	42, 334, 430
AspS9I	GGNCC	4 cut(s)	154, 468, 889, 1364
AsuC2I	CCSGG	2 cut(s)	687, 887
AsuHPI	GGTGA	6 cut(s)	163, 454, 460, 1303, 1435, 1479
AsuII	TTCGAA	1 cut(s)	476
AvaI	CYCGRG	1 cut(s)	257
AvaII	GGWCC	3 cut(s)	154, 889, 1364
BaeGI	GKGCMC	2 cut(s)	318, 983
BamHI	GGATCC	2 cut(s)	689, 1069
BanI	GGYRCC	2 cut(s)	39, 994
BauI	CACGAG	1 cut(s)	1649
Bbv12I	GWGCWC	2 cut(s)	318, 1246
BbvI	GCAGC	6 cut(s)	772, 775, 787, 799, 830, 1516
BceAI	ACGGC	1 cut(s)	41
BcnI	CCSGG	2 cut(s)	687, 887
BcoDI	GTCTC	1 cut(s)	1064
BfaI	CTAG	1 cut(s)	1562
BfmI	CTRYAG	3 cut(s)	16, 403, 1530
BfoI	RGCGCY	2 cut(s)	43, 431
BfrI	CTTAAG	1 cut(s)	1096
BlpI	GCTNAGC	1 cut(s)	392
BmcAI	AGTACT	1 cut(s)	101
Bme1390I	CCNGG	2 cut(s)	687, 887
Bme18I	GGWCC	3 cut(s)	154, 889, 1364
BmeRI	GACNNNNNGTC	1 cut(s)	1362
BmeT110I	CYCGRG	1 cut(s)	257
BmgT120I	GGNCC	4 cut(s)	154, 468, 889, 1364
BmiI	GGNNCC	5 cut(s)	41, 69, 691, 996, 1071
BmrFI	CCNGG	2 cut(s)	687, 887
BmsI	GCATC	5 cut(s)	1130, 1284, 1313, 1468, 1731
BoxI	GACNNNNGTC	1 cut(s)	152
BplI	GAGNNNNNCTC	2 cut(s)	838, 870
BpmI	CTGGAG	2 cut(s)	507, 1542
Bpu1102I	GCTNAGC	1 cut(s)	392
Bpu14I	TTCGAA	1 cut(s)	476
BpuEI	CTTGAG	1 cut(s)	794
BpuMI	CCSGG	2 cut(s)	687, 887
BsaAI	YACGTR	1 cut(s)	1196
BsaHI	GRCGYC	3 cut(s)	40, 114, 1087
BsaJI	CCNNGG	3 cut(s)	174, 309, 600
BsaWI	WCCGGW	1 cut(s)	380
BsaXI	ACNNNNNCTCC	6 cut(s)	86, 116, 891, 921, 962, 992
Bsc4I	CCNNNNNNNGG	4 cut(s)	151, 163, 1043, 1226
Bse1I	ACTGG	6 cut(s)	97, 201, 524, 1366, 1577, 1629
Bse3DI	GCAATG	1 cut(s)	955
BseDI	CCNNGG	3 cut(s)	174, 309, 600
BseGI	GGATG	6 cut(s)	499, 940, 1328, 1573, 1678, 1722
BseLI	CCNNNNNNNGG	4 cut(s)	151, 163, 1043, 1226
BseMI	GCAATG	1 cut(s)	955
BseMII	CTCAG	5 cut(s)	383, 570, 633, 1163, 1698
BseNI	ACTGG	6 cut(s)	97, 201, 524, 1366, 1577, 1629
BseRI	GAGGAG	5 cut(s)	194, 672, 915, 968, 983
BseSI	GKGCMC	2 cut(s)	318, 983
BseXI	GCAGC	6 cut(s)	772, 775, 787, 799, 830, 1516
BseYI	CCCAGC	1 cut(s)	1028
Bsh1285I	CGRYCG	1 cut(s)	1747
BshFI	GGCC	2 cut(s)	263, 469
BshNI	GGYRCC	2 cut(s)	39, 994
BsiEI	CGRYCG	1 cut(s)	1747
BsiHKAI	GWGCWC	2 cut(s)	318, 1246
BsiHKCI	CYCGRG	1 cut(s)	257
BsiSI	CCGG	5 cut(s)	37, 74, 381, 686, 887
BslFI	GGGAC	5 cut(s)	70, 523, 700, 869, 1601
BslI	CCNNNNNNNGG	4 cut(s)	151, 163, 1043, 1226
BsmAI	GTCTC	1 cut(s)	1064
BsmFI	GGGAC	5 cut(s)	70, 523, 700, 869, 1601
BsmI	GAATGC	1 cut(s)	334
BsnI	GGCC	2 cut(s)	263, 469
BsoBI	CYCGRG	1 cut(s)	257
Bsp119I	TTCGAA	1 cut(s)	476
Bsp1286I	GDGCHC	3 cut(s)	318, 983, 1246
Bsp143I	GATC	9 cut(s)	127, 166, 199, 607, 622, 689, 1069, 1280, 1384
Bsp1720I	GCTNAGC	1 cut(s)	392
BspANI	GGCC	2 cut(s)	263, 469
BspCNI	CTCAG	5 cut(s)	384, 571, 634, 1164, 1699
BspHI	TCATGA	1 cut(s)	117
BspLI	GGNNCC	5 cut(s)	41, 69, 691, 996, 1071
BspMAI	CTGCAG	2 cut(s)	407, 1534
BspPI	GGATC	8 cut(s)	174, 207, 615, 684, 697, 1064, 1077, 1379
BspT104I	TTCGAA	1 cut(s)	476
BspT107I	GGYRCC	2 cut(s)	39, 994
BspTI	CTTAAG	1 cut(s)	1096
BsrDI	GCAATG	1 cut(s)	955
BsrI	ACTGG	6 cut(s)	97, 201, 524, 1366, 1577, 1629
BssECI	CCNNGG	3 cut(s)	174, 309, 600
BssMI	GATC	9 cut(s)	127, 166, 199, 607, 622, 689, 1069, 1280, 1384
BssNAI	GTATAC	2 cut(s)	1180, 1193
BssNI	GRCGYC	3 cut(s)	40, 114, 1087
BssSI	CACGAG	1 cut(s)	1649
BssT1I	CCWWGG	3 cut(s)	174, 309, 600
Bst1107I	GTATAC	2 cut(s)	1180, 1193
Bst2BI	CACGAG	1 cut(s)	1649
Bst4CI	ACNGT	2 cut(s)	1287, 1540
Bst6I	CTCTTC	1 cut(s)	284
BstACI	GRCGYC	3 cut(s)	40, 114, 1087
BstAFI	CTTAAG	1 cut(s)	1096
BstAPI	GCANNNNNTGC	3 cut(s)	402, 572, 812
BstBAI	YACGTR	1 cut(s)	1196
BstBI	TTCGAA	1 cut(s)	476
BstDEI	CTNAG	6 cut(s)	392, 579, 642, 1091, 1172, 1707
BstENI	CCTNNNNNAGG	1 cut(s)	149
BstF5I	GGATG	6 cut(s)	499, 940, 1328, 1573, 1678, 1722
BstH2I	RGCGCY	2 cut(s)	43, 431
BstHHI	GCGC	3 cut(s)	42, 334, 430
BstKTI	GATC	9 cut(s)	130, 169, 202, 610, 625, 692, 1072, 1283, 1387
BstMAI	GTCTC	1 cut(s)	1064
BstMBI	GATC	9 cut(s)	127, 166, 199, 607, 622, 689, 1069, 1280, 1384
BstMCI	CGRYCG	1 cut(s)	1747
BstNSI	RCATGY	2 cut(s)	566, 1663
BstPAI	GACNNNNGTC	1 cut(s)	152
BstSCI	CCNGG	2 cut(s)	685, 885
BstSFI	CTRYAG	3 cut(s)	16, 403, 1530
BstSLI	GKGCMC	2 cut(s)	318, 983
BstV1I	GCAGC	6 cut(s)	772, 775, 787, 799, 830, 1516
BstX2I	RGATCY	3 cut(s)	166, 689, 1069
BstYI	RGATCY	3 cut(s)	166, 689, 1069
BstZ17I	GTATAC	2 cut(s)	1180, 1193
BsuRI	GGCC	2 cut(s)	263, 469
BtsCI	GGATG	6 cut(s)	499, 940, 1328, 1573, 1678, 1722
BtsI	GCAGTG	2 cut(s)	403, 412
BtsIMutI	CAGTG	5 cut(s)	289, 403, 412, 531, 1283
CaiI	CAGNNNCTG	2 cut(s)	402, 1538
CciI	TCATGA	1 cut(s)	117
CfoI	GCGC	3 cut(s)	42, 334, 430
Cfr13I	GGNCC	4 cut(s)	154, 468, 889, 1364
CseI	GACGC	2 cut(s)	103, 1076
Csp6I	GTAC	5 cut(s)	100, 274, 497, 583, 1762
CviAII	CATG	8 cut(s)	118, 320, 503, 563, 1025, 1133, 1238, 1660
CviQI	GTAC	5 cut(s)	100, 274, 497, 583, 1762
DdeI	CTNAG	6 cut(s)	392, 579, 642, 1091, 1172, 1707
DinI	GGCGCC	1 cut(s)	41
DpnI	GATC	9 cut(s)	129, 168, 201, 609, 624, 691, 1071, 1282, 1386
DpnII	GATC	9 cut(s)	127, 166, 199, 607, 622, 689, 1069, 1280, 1384
DraIII	CACNNNGTG	1 cut(s)	1241
DriI	GACNNNNNGTC	1 cut(s)	1362
Eam1104I	CTCTTC	1 cut(s)	284
Eam1105I	GACNNNNNGTC	1 cut(s)	1362
EarI	CTCTTC	1 cut(s)	284
EciI	GGCGGA	2 cut(s)	38, 60
Eco130I	CCWWGG	3 cut(s)	174, 309, 600
Eco147I	AGGCCT	1 cut(s)	263
Eco32I	GATATC	1 cut(s)	79
Eco47I	GGWCC	3 cut(s)	154, 889, 1364
Eco47III	AGCGCT	1 cut(s)	429
Eco57I	CTGAAG	3 cut(s)	265, 611, 747
Eco88I	CYCGRG	1 cut(s)	257
EcoNI	CCTNNNNNAGG	1 cut(s)	149
EcoRI	GAATTC	1 cut(s)	1601
EcoRV	GATATC	1 cut(s)	79
EcoT14I	CCWWGG	3 cut(s)	174, 309, 600
EcoT22I	ATGCAT	2 cut(s)	568, 1483
EgeI	GGCGCC	1 cut(s)	41
EheI	GGCGCC	1 cut(s)	41
ErhI	CCWWGG	3 cut(s)	174, 309, 600
FaeI	CATG	8 cut(s)	121, 323, 506, 566, 1028, 1136, 1241, 1663
FalI	AAGNNNNNCTT	4 cut(s)	263, 295, 1661, 1693
FaqI	GGGAC	5 cut(s)	70, 523, 700, 869, 1601
FatI	CATG	8 cut(s)	117, 319, 502, 562, 1024, 1132, 1237, 1659
FblI	GTMKAC	3 cut(s)	1179, 1192, 1696
FokI	GGATG	6 cut(s)	506, 947, 1335, 1580, 1685, 1709
FspBI	CTAG	1 cut(s)	1562
GlaI	GCGC	3 cut(s)	41, 333, 429
GsaI	CCCAGC	1 cut(s)	1032
GsuI	CTGGAG	2 cut(s)	507, 1542
HaeII	RGCGCY	2 cut(s)	43, 431
HaeIII	GGCC	2 cut(s)	263, 469
HapII	CCGG	5 cut(s)	37, 74, 381, 686, 887
HgaI	GACGC	2 cut(s)	103, 1076
HhaI	GCGC	3 cut(s)	42, 334, 430
Hin1I	GRCGYC	3 cut(s)	40, 114, 1087
Hin1II	CATG	8 cut(s)	121, 323, 506, 566, 1028, 1136, 1241, 1663
Hin6I	GCGC	3 cut(s)	40, 332, 428
HinP1I	GCGC	3 cut(s)	40, 332, 428
HincII	GTYRAC	1 cut(s)	1356
HindII	GTYRAC	1 cut(s)	1356
HindIII	AAGCTT	2 cut(s)	867, 1775
HinfI	GANTC	6 cut(s)	247, 722, 971, 1202, 1576, 1633
HpaII	CCGG	5 cut(s)	37, 74, 381, 686, 887
HphI	GGTGA	6 cut(s)	163, 454, 460, 1303, 1435, 1479
Hpy166II	GTNNAC	7 cut(s)	316, 1180, 1193, 1201, 1356, 1648, 1697
Hpy188III	TCNNGA	8 cut(s)	118, 145, 157, 773, 857, 1493, 1619, 1649
Hpy8I	GTNNAC	7 cut(s)	316, 1180, 1193, 1201, 1356, 1648, 1697
HpyAV	CCTTC	6 cut(s)	154, 274, 729, 771, 1414, 1436
HpyCH4III	ACNGT	2 cut(s)	1287, 1540
HpyCH4IV	ACGT	1 cut(s)	1195
HpyF3I	CTNAG	6 cut(s)	392, 579, 642, 1091, 1172, 1707
HpySE526I	ACGT	1 cut(s)	1195
Hsp92I	GRCGYC	3 cut(s)	40, 114, 1087
Hsp92II	CATG	8 cut(s)	121, 323, 506, 566, 1028, 1136, 1241, 1663
HspAI	GCGC	3 cut(s)	40, 332, 428
KasI	GGCGCC	1 cut(s)	39
Kzo9I	GATC	9 cut(s)	127, 166, 199, 607, 622, 689, 1069, 1280, 1384
LmnI	GCTCC	5 cut(s)	73, 526, 842, 859, 902
Lsp1109I	GCAGC	6 cut(s)	772, 775, 787, 799, 830, 1516
LweI	GCATC	5 cut(s)	1130, 1284, 1313, 1468, 1731
MaeI	CTAG	1 cut(s)	1562
MaeII	ACGT	1 cut(s)	1195
MaeIII	GTNAC	6 cut(s)	192, 284, 398, 528, 1126, 1233
MalI	GATC	9 cut(s)	129, 168, 201, 609, 624, 691, 1071, 1282, 1386
MboI	GATC	9 cut(s)	127, 166, 199, 607, 622, 689, 1069, 1280, 1384
MboII	GAAGA	8 cut(s)	226, 259, 271, 617, 926, 971, 1290, 1558
MflI	RGATCY	3 cut(s)	166, 689, 1069
MhlI	GDGCHC	3 cut(s)	318, 983, 1246
MluCI	AATT	7 cut(s)	367, 472, 594, 929, 1014, 1210, 1601
Mly113I	GGCGCC	1 cut(s)	40
MlyI	GAGTC	2 cut(s)	980, 1196
Mph1103I	ATGCAT	2 cut(s)	568, 1483
MseI	TTAA	7 cut(s)	702, 833, 1013, 1097, 1260, 1407, 1610
MslI	CAYNNNNRTG	3 cut(s)	311, 1476, 1653
MspA1I	CMGCKG	2 cut(s)	391, 821
MspCI	CTTAAG	1 cut(s)	1096
MspI	CCGG	5 cut(s)	37, 74, 381, 686, 887
MspR9I	CCNGG	2 cut(s)	687, 887
Mva1269I	GAATGC	1 cut(s)	334
NarI	GGCGCC	1 cut(s)	40
NciI	CCSGG	2 cut(s)	687, 887
NdeII	GATC	9 cut(s)	127, 166, 199, 607, 622, 689, 1069, 1280, 1384
NlaIII	CATG	8 cut(s)	121, 323, 506, 566, 1028, 1136, 1241, 1663
NlaIV	GGNNCC	5 cut(s)	41, 69, 691, 996, 1071
NmuCI	GTSAC	4 cut(s)	284, 398, 528, 1233
NsiI	ATGCAT	2 cut(s)	568, 1483
NspI	RCATGY	2 cut(s)	566, 1663
NspV	TTCGAA	1 cut(s)	476
OliI	CACNNNNGTG	1 cut(s)	311
PaeR7I	CTCGAG	1 cut(s)	257
PagI	TCATGA	1 cut(s)	117
PceI	AGGCCT	1 cut(s)	263
PciI	ACATGT	1 cut(s)	1659
PctI	GAATGC	1 cut(s)	334
PfeI	GAWTC	4 cut(s)	247, 722, 1576, 1633
PflMI	CCANNNNNTGG	1 cut(s)	1226
PfoI	TCCNGGA	2 cut(s)	685, 885
PleI	GAGTC	2 cut(s)	979, 1196
PluTI	GGCGCC	1 cut(s)	43
PpsI	GAGTC	2 cut(s)	979, 1196
Ppu21I	YACGTR	1 cut(s)	1196
PscI	ACATGT	1 cut(s)	1659
PshAI	GACNNNNGTC	1 cut(s)	152
PsiI	TTATAA	1 cut(s)	1215
PspFI	CCCAGC	1 cut(s)	1028
PspN4I	GGNNCC	5 cut(s)	41, 69, 691, 996, 1071
PspPI	GGNCC	4 cut(s)	154, 468, 889, 1364
PspXI	VCTCGAGB	1 cut(s)	257
PstI	CTGCAG	2 cut(s)	407, 1534
PstNI	CAGNNNCTG	2 cut(s)	402, 1538
PsuI	RGATCY	3 cut(s)	166, 689, 1069
PvuII	CAGCTG	2 cut(s)	391, 821
RsaI	GTAC	5 cut(s)	101, 275, 498, 584, 1763
RsaNI	GTAC	5 cut(s)	100, 274, 497, 583, 1762
RseI	CAYNNNNRTG	3 cut(s)	311, 1476, 1653
SaqAI	TTAA	7 cut(s)	702, 833, 1013, 1097, 1260, 1407, 1610
Sau3AI	GATC	9 cut(s)	127, 166, 199, 607, 622, 689, 1069, 1280, 1384
Sau96I	GGNCC	4 cut(s)	154, 468, 889, 1364
ScaI	AGTACT	1 cut(s)	101
SchI	GAGTC	2 cut(s)	980, 1196
ScrFI	CCNGG	2 cut(s)	687, 887
SduI	GDGCHC	3 cut(s)	318, 983, 1246
SfaNI	GCATC	5 cut(s)	1130, 1284, 1313, 1468, 1731
SfcI	CTRYAG	3 cut(s)	16, 403, 1530
SfoI	GGCGCC	1 cut(s)	41
Sfr274I	CTCGAG	1 cut(s)	257
SfuI	TTCGAA	1 cut(s)	476
SinI	GGWCC	3 cut(s)	154, 889, 1364
SlaI	CTCGAG	1 cut(s)	257
SmiMI	CAYNNNNRTG	3 cut(s)	311, 1476, 1653
SmlI	CTYRAG	3 cut(s)	257, 773, 1096
SmoI	CTYRAG	3 cut(s)	257, 773, 1096
Sse9I	AATT	7 cut(s)	367, 472, 594, 929, 1014, 1210, 1601
SseBI	AGGCCT	1 cut(s)	263
SspDI	GGCGCC	1 cut(s)	39
SspI	AATATT	1 cut(s)	1168
SspMI	CTAG	1 cut(s)	1562
StuI	AGGCCT	1 cut(s)	263
StyD4I	CCNGG	2 cut(s)	685, 885
StyI	CCWWGG	3 cut(s)	174, 309, 600
TaaI	ACNGT	2 cut(s)	1287, 1540
TaiI	ACGT	1 cut(s)	1198
TaqI	TCGA	4 cut(s)	126, 258, 476, 1791
TasI	AATT	7 cut(s)	367, 472, 594, 929, 1014, 1210, 1601
TatI	WGTACW	3 cut(s)	99, 496, 1761
TauI	GCSGC	5 cut(s)	45, 806, 818, 1087, 1329
TfiI	GAWTC	4 cut(s)	247, 722, 1576, 1633
Tru1I	TTAA	7 cut(s)	702, 833, 1013, 1097, 1260, 1407, 1610
Tru9I	TTAA	7 cut(s)	702, 833, 1013, 1097, 1260, 1407, 1610
TscAI	CASTG	5 cut(s)	289, 403, 412, 531, 1290
TseFI	GTSAC	4 cut(s)	284, 398, 528, 1233
TseI	GCWGC	6 cut(s)	785, 788, 800, 812, 818, 1529
Tsp45I	GTSAC	4 cut(s)	284, 398, 528, 1233
TspDTI	ATGAA	6 cut(s)	341, 491, 942, 951, 1013, 1559
TspGWI	ACGGA	3 cut(s)	164, 702, 1759
TspRI	CASTG	5 cut(s)	289, 403, 412, 531, 1290
Van91I	CCANNNNNTGG	1 cut(s)	1226
Vha464I	CTTAAG	1 cut(s)	1096
VneI	GTGCAC	1 cut(s)	314
VpaK11BI	GGWCC	3 cut(s)	154, 889, 1364
XagI	CCTNNNNNAGG	1 cut(s)	149
XapI	RAATTY	1 cut(s)	1601
XceI	RCATGY	2 cut(s)	566, 1663
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1227
XhoI	CTCGAG	1 cut(s)	257
XmiI	GTMKAC	3 cut(s)	1179, 1192, 1696
XspI	CTAG	1 cut(s)	1562
ZrmI	AGTACT	1 cut(s)	101
Zsp2I	ATGCAT	2 cut(s)	568, 1483

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.