Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0009798

Physical Location & Seq

Genomic Coordinates Forward (+)

60186695 .. 60190660

Gene Structure 3966 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G031990.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1815 bp

ATGTCCAAGCAGCCCAAGCAGACCTACAGAGTGTGCTTCTGCTTCCGGCGGCGCTTCCGCCTCGCCGTATCGGAGGCTCCGCCGGAGATCAAGACCCTGTTTGACCAGCACTCCGAGAATGGCGTCATGACCCTCGATCACTTCCACCGCTTCCTGACCGAGGTCCAGAAGGAGGACCTGACCAAGGAGGAGACCCAGGTCTTACTGGATCAGAGCCTCAACGACTTCAAGCACCTCAATATCTTCCACCGCAAGATTCTCAACCTCGAGGCCTTCTTCAAGTTCCTCTTCAGTGACAATAACCCCCCTATCAACAACAATAAGGTGCACCATGATATGAATGCGCCTTTGTCGCATTATTACATACACACCGGACATAATTCCTATTTGACCGGAAATCAGCTGAGCAGTGACTGCAGTGATGTGCCGATTAAAGAAGCTCTTCTCAGAGGAGTGAGAGTGATTGAACTTGATATTTGGCCCAATTCCAAGAAAGATGATGTGGATGTACTTCACGGAGGGACATTGACTGCTCCGGTGCCACTTATCAAATGCTTCCAGTGTATAAAGGAACATGCTTTTGTAAAATCCGAGTACCCTGTTGTAATTACCTTAGAGGATCATCTAACCCCTGATCTTCAGGCTAAAGTGGCTGGGATGATTACCCAAACATTTGGAGAGGTGCTGTTTTATCCTCCGGGATCCGAGTGTCTTAAAGACTTTCCATCCCCAGAATCACTAAAGAGAAGGATTATTATATCAACCAAACCACCTTCAGAATATCTTGAGGCTAAAGCTGCTGCCGAAAAAGCTGCAGCAAAAGCTGCCGCAGCTGGAAATGACTTAAAGAGGGGAGCAAGTTTAGCTCCTGATGAGGAAGCTTGGGGTAGCGAAGTCCCGGACCAAAAGGGAGCAGTTGCAGAAGATGACAAGCAGAATGAATTGGATGAAAATAATAGCAATGAGGAGGAAGATGTTGAGGAGTCCAAGTGCCCACAAAATGAGGCACCTGAATATAAGCGTTTGATTGCCATTCATGCTGGGAAACCCAAAGGTGGATTAGTGGAGTGTCTCAAAGTGGATCCTAATAAAGTGCGGCGTCTTAGCTTAAGTGAGCAACAGCTTGAAAAGGCATCAGTAACTTATGGAAAAGAGATAGTCAGATTTACCCAGAGGAATATTCTGAGGGTGTACCCAAAGGGTATACGTGTGGACTCATCAAATTATAACCCAATGATTGGGTGGTCGCATGGTGCTCAAATGGTTGCATTTAATATGCAGGGATATGGAAGATCACTTTGGGTGATGCAAGGAATGTTTAGAGCTAATGGTGGATGCGGCTATGTGAAAAAACCAGATTTTCTGTTAACGACTGGTCCAAATAATGAGGTCTTTGATCCTCAACATAAGTCATCAGTTAAAAAAACTTTGAAGGTGAAAGTCTATATGGGAGAAGGGTGGTATTATGACTTCAAGCACACACACTTTGATGCATATTCGCCGCCTGATTTTTATGCAAGGGTAGGTATTGCTGGAGTTGCTGCAGATACTCAAATGAAGAAAACAAAGACGCTAGAGGATGACTGGATTCCTGCTTGGGACGAATCATTTGAGTTCCCATTAACTTGTCCAGAACTGGCTGTGATTCGCATTGAAGTTCACGAGTACGACATGTCAGAAAAGGATGATTTTGGAGGGCAAACAAGTCTACCACTATCTGAGCTGAAAAAGGGCATCCGAGCAGTTCCTTTACACGACCGTAAGGGAGAGAAGTACAAATCCGTAAAGCTTCTTATGCACTTCGATTTAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004620 GO:0004629 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0007049 GO:0007275 GO:0008081 GO:0008150 GO:0009553 GO:0009555 GO:0009556 GO:0009605 GO:0009607 GO:0009617 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009908 GO:0009987 GO:0010600 GO:0010601 GO:0010817 GO:0016020 GO:0016298 GO:0016787 GO:0016788 GO:0019222 GO:0019953 GO:0022402 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032350 GO:0032352 GO:0032501 GO:0032502 GO:0034293 GO:0042578 GO:0042742 GO:0043207 GO:0043934 GO:0044464 GO:0044703 GO:0046885 GO:0046886 GO:0048229 GO:0048236 GO:0048367 GO:0048437 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051321 GO:0051704 GO:0051707 GO:0061458 GO:0065007 GO:0065008 GO:0071944 GO:0090354 GO:0090355 GO:0090567 GO:0098542 GO:0099402 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04020 ko04070 ko04919 ko04933 map00562 map01100 map04020 map04070 map04919 map04933

Pfam Domains

Protein Families

C2 EF-hand_like PI-PLC-X PI-PLC-Y

Protein Analysis

604

Amino Acids

68.49

Weight (kDa)

6.19

Isoelectric Point (pI)

44.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PI-PLC-X	PF00388	113 - 256	6e-51	Phosphatidylinositol-specific phospholipase C, X domain
PI-PLC-Y	PF00387	368 - 454	4.2e-29	Phosphatidylinositol-specific phospholipase C, Y domain
C2	PF00168	476 - 578	6e-13	C2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009798)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G08510 AT3G08510 AT3G08510 AT3G08510 AT3G55940
fragaria_vesca	FvH4_7g24471 FvH4_7g24471
malus_domestica	MD01G1153000.v1.1 MD07G1221900.v1.1
prunus_persica	Prupe.2G250100_v2.0.a1
pyrus_communis	pycom01g17060 pycom07g20040
rosa_chinensis	RchiOBHm_Chr1g0370231
rosa_laevigata	RLG00000027067
rosa_multiflora	Rmu_sc0017405.1_g000001 Rmu_sc0030456.1_g000001
rosa_roxburghii	Rroxscaffold_4G00286730
rosa_rugosa	Rorug01G0354700 Rorug01G0354800
rosa_samantha	Rh1AG363500
rosa_wichuraiana	Rw1G031990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1227
AbsI	CCTCGAGG	1 cut(s)	266
AccB1I	GGYRCC	2 cut(s)	538, 1006
AccB7I	CCANNNNNTGG	1 cut(s)	1238
AccI	GTMKAC	2 cut(s)	1204, 1708
AciI	CCGC	9 cut(s)	49, 58, 80, 148, 250, 828, 1096, 1338, 1502
AclWI	GGATC	7 cut(s)	216, 627, 696, 709, 1076, 1089, 1391
AcuI	CTGAAG	3 cut(s)	274, 623, 759
AcyI	GRCGYC	2 cut(s)	123, 1099
AfaI	GTAC	5 cut(s)	510, 596, 1193, 1667, 1775
AfiI	CCNNNNNNNGG	5 cut(s)	160, 172, 184, 1055, 1238
AflII	CTTAAG	1 cut(s)	1108
AflIII	ACRYGT	2 cut(s)	1207, 1671
AgsI	TTSAA	7 cut(s)	229, 280, 467, 1127, 1432, 1474, 1655
AjnI	CCWGG	1 cut(s)	195
AjuI	GAANNNNNNNTTGG	2 cut(s)	1282, 1314
Alw21I	GWGCWC	2 cut(s)	330, 1258
Alw26I	GTCTC	2 cut(s)	185, 1076
Alw44I	GTGCAC	1 cut(s)	326
AlwI	GGATC	7 cut(s)	216, 627, 696, 709, 1076, 1089, 1391
AlwNI	CAGNNNCTG	1 cut(s)	414
Ama87I	CYCGRG	1 cut(s)	266
AoxI	GGCC	2 cut(s)	270, 479
ApaLI	GTGCAC	1 cut(s)	326
ApeKI	GCWGC	8 cut(s)	10, 797, 800, 812, 815, 824, 830, 1541
ArsI	GACNNNNNNTTYG	2 cut(s)	1592, 1624
Asp700I	GAANNNNTTC	1 cut(s)	441
AspLEI	GCGC	2 cut(s)	54, 346
AspS9I	GGNCC	5 cut(s)	163, 175, 480, 901, 1376
AsuC2I	CCSGG	2 cut(s)	699, 899
AsuHPI	GGTGA	2 cut(s)	1315, 1447
AvaI	CYCGRG	1 cut(s)	266
AvaII	GGWCC	4 cut(s)	163, 175, 901, 1376
BaeGI	GKGCMC	2 cut(s)	330, 995
BamHI	GGATCC	2 cut(s)	701, 1081
BanI	GGYRCC	2 cut(s)	538, 1006
BarI	GAAGNNNNNNTAC	2 cut(s)	1454, 1486
BauI	CACGAG	1 cut(s)	1661
Bbv12I	GWGCWC	2 cut(s)	330, 1258
BbvI	GCAGC	8 cut(s)	22, 784, 787, 799, 811, 827, 842, 1528
BccI	CCATC	1 cut(s)	733
BceAI	ACGGC	1 cut(s)	50
BcgI	CGANNNNNNTGC	2 cut(s)	794, 828
BciT130I	CCWGG	1 cut(s)	197
BcnI	CCSGG	2 cut(s)	699, 899
BcoDI	GTCTC	2 cut(s)	185, 1076
BfaI	CTAG	1 cut(s)	1574
BfmI	CTRYAG	4 cut(s)	25, 415, 813, 1542
BfoI	RGCGCY	1 cut(s)	55
BfrI	CTTAAG	1 cut(s)	1108
BlpI	GCTNAGC	1 cut(s)	404
Bme1390I	CCNGG	3 cut(s)	197, 699, 899
Bme18I	GGWCC	4 cut(s)	163, 175, 901, 1376
BmeT110I	CYCGRG	1 cut(s)	266
BmgT120I	GGNCC	5 cut(s)	163, 175, 480, 901, 1376
BmiI	GGNNCC	5 cut(s)	78, 540, 703, 1008, 1083
BmrFI	CCNGG	3 cut(s)	197, 699, 899
BmsI	GCATC	5 cut(s)	1142, 1296, 1325, 1480, 1743
BoxI	GACNNNNGTC	2 cut(s)	161, 197
BpmI	CTGGAG	1 cut(s)	1554
Bpu1102I	GCTNAGC	1 cut(s)	404
BpuEI	CTTGAG	1 cut(s)	806
BpuMI	CCSGG	2 cut(s)	699, 899
BsaAI	YACGTR	1 cut(s)	1208
BsaHI	GRCGYC	2 cut(s)	123, 1099
BsaI	GGTCTC	1 cut(s)	185
BsaJI	CCNNGG	3 cut(s)	159, 183, 195
BsaWI	WCCGGW	3 cut(s)	371, 392, 535
BsaXI	ACNNNNNCTCC	6 cut(s)	95, 125, 444, 474, 974, 1004
Bsc4I	CCNNNNNNNGG	5 cut(s)	160, 172, 184, 1055, 1238
Bse1I	ACTGG	5 cut(s)	210, 559, 1378, 1589, 1641
Bse3DI	GCAATG	1 cut(s)	967
BseBI	CCWGG	1 cut(s)	197
BseDI	CCNNGG	3 cut(s)	159, 183, 195
BseGI	GGATG	8 cut(s)	511, 663, 725, 952, 1340, 1585, 1690, 1734
BseLI	CCNNNNNNNGG	5 cut(s)	160, 172, 184, 1055, 1238
BseMI	GCAATG	1 cut(s)	967
BseMII	CTCAG	4 cut(s)	395, 460, 1175, 1710
BseNI	ACTGG	5 cut(s)	210, 559, 1378, 1589, 1641
BseRI	GAGGAG	4 cut(s)	203, 465, 980, 995
BseSI	GKGCMC	2 cut(s)	330, 995
BseXI	GCAGC	8 cut(s)	22, 784, 787, 799, 811, 827, 842, 1528
BseYI	CCCAGC	2 cut(s)	653, 1040
Bsh1285I	CGRYCG	1 cut(s)	1759
BshFI	GGCC	2 cut(s)	272, 481
BshNI	GGYRCC	2 cut(s)	538, 1006
BsiEI	CGRYCG	1 cut(s)	1759
BsiHKAI	GWGCWC	2 cut(s)	330, 1258
BsiHKCI	CYCGRG	1 cut(s)	266
BsiSI	CCGG	7 cut(s)	46, 83, 372, 393, 536, 698, 899
BslFI	GGGAC	3 cut(s)	535, 881, 1613
BslI	CCNNNNNNNGG	5 cut(s)	160, 172, 184, 1055, 1238
BsmAI	GTCTC	2 cut(s)	185, 1076
BsmFI	GGGAC	3 cut(s)	535, 881, 1613
BsmI	GAATGC	1 cut(s)	346
BsnI	GGCC	2 cut(s)	272, 481
Bso31I	GGTCTC	1 cut(s)	185
BsoBI	CYCGRG	1 cut(s)	266
Bsp1286I	GDGCHC	3 cut(s)	330, 995, 1258
Bsp143I	GATC	9 cut(s)	87, 136, 208, 619, 634, 701, 1081, 1292, 1396
Bsp1720I	GCTNAGC	1 cut(s)	404
BspACI	CCGC	9 cut(s)	49, 58, 80, 148, 250, 828, 1096, 1338, 1502
BspANI	GGCC	2 cut(s)	272, 481
BspCNI	CTCAG	4 cut(s)	396, 459, 1176, 1711
BspHI	TCATGA	1 cut(s)	126
BspLI	GGNNCC	5 cut(s)	78, 540, 703, 1008, 1083
BspMAI	CTGCAG	3 cut(s)	419, 817, 1546
BspPI	GGATC	7 cut(s)	216, 627, 696, 709, 1076, 1089, 1391
BspQI	GCTCTTC	1 cut(s)	447
BspT107I	GGYRCC	2 cut(s)	538, 1006
BspTI	CTTAAG	1 cut(s)	1108
BspTNI	GGTCTC	1 cut(s)	185
BsrDI	GCAATG	1 cut(s)	967
BsrI	ACTGG	5 cut(s)	210, 559, 1378, 1589, 1641
BssECI	CCNNGG	3 cut(s)	159, 183, 195
BssMI	GATC	9 cut(s)	87, 136, 208, 619, 634, 701, 1081, 1292, 1396
BssNAI	GTATAC	1 cut(s)	1205
BssNI	GRCGYC	2 cut(s)	123, 1099
BssSI	CACGAG	1 cut(s)	1661
BssT1I	CCWWGG	1 cut(s)	183
Bst1107I	GTATAC	1 cut(s)	1205
Bst2BI	CACGAG	1 cut(s)	1661
Bst2UI	CCWGG	1 cut(s)	197
Bst4CI	ACNGT	1 cut(s)	1760
Bst6I	CTCTTC	2 cut(s)	293, 447
BstACI	GRCGYC	2 cut(s)	123, 1099
BstAFI	CTTAAG	1 cut(s)	1108
BstAPI	GCANNNNNTGC	2 cut(s)	414, 824
BstBAI	YACGTR	1 cut(s)	1208
BstDEI	CTNAG	6 cut(s)	404, 446, 613, 1103, 1184, 1719
BstENI	CCTNNNNNAGG	2 cut(s)	158, 182
BstF5I	GGATG	8 cut(s)	511, 663, 725, 952, 1340, 1585, 1690, 1734
BstH2I	RGCGCY	1 cut(s)	55
BstHHI	GCGC	2 cut(s)	54, 346
BstKTI	GATC	9 cut(s)	90, 139, 211, 622, 637, 704, 1084, 1295, 1399
BstMAI	GTCTC	2 cut(s)	185, 1076
BstMBI	GATC	9 cut(s)	87, 136, 208, 619, 634, 701, 1081, 1292, 1396
BstMCI	CGRYCG	1 cut(s)	1759
BstNI	CCWGG	1 cut(s)	197
BstNSI	RCATGY	2 cut(s)	578, 1675
BstPAI	GACNNNNGTC	2 cut(s)	161, 197
BstSCI	CCNGG	3 cut(s)	195, 697, 897
BstSFI	CTRYAG	4 cut(s)	25, 415, 813, 1542
BstSLI	GKGCMC	2 cut(s)	330, 995
BstV1I	GCAGC	8 cut(s)	22, 784, 787, 799, 811, 827, 842, 1528
BstX2I	RGATCY	2 cut(s)	701, 1081
BstXI	CCANNNNNNTGG	1 cut(s)	674
BstYI	RGATCY	2 cut(s)	701, 1081
BstZ17I	GTATAC	1 cut(s)	1205
BsuRI	GGCC	2 cut(s)	272, 481
BtsCI	GGATG	8 cut(s)	511, 663, 725, 952, 1340, 1585, 1690, 1734
BtsI	GCAGTG	2 cut(s)	415, 424
BtsIMutI	CAGTG	4 cut(s)	298, 415, 424, 566
CaiI	CAGNNNCTG	1 cut(s)	414
CciI	TCATGA	1 cut(s)	126
CfoI	GCGC	2 cut(s)	54, 346
Cfr13I	GGNCC	5 cut(s)	163, 175, 480, 901, 1376
CseI	GACGC	3 cut(s)	112, 1088, 1579
Csp6I	GTAC	5 cut(s)	509, 595, 1192, 1666, 1774
CviAII	CATG	6 cut(s)	127, 332, 575, 1037, 1250, 1672
CviQI	GTAC	5 cut(s)	509, 595, 1192, 1666, 1774
DdeI	CTNAG	6 cut(s)	404, 446, 613, 1103, 1184, 1719
DpnI	GATC	9 cut(s)	89, 138, 210, 621, 636, 703, 1083, 1294, 1398
DpnII	GATC	9 cut(s)	87, 136, 208, 619, 634, 701, 1081, 1292, 1396
Eam1104I	CTCTTC	2 cut(s)	293, 447
EarI	CTCTTC	2 cut(s)	293, 447
EciI	GGCGGA	2 cut(s)	47, 69
Eco130I	CCWWGG	1 cut(s)	183
Eco147I	AGGCCT	1 cut(s)	272
Eco31I	GGTCTC	1 cut(s)	185
Eco47I	GGWCC	4 cut(s)	163, 175, 901, 1376
Eco57I	CTGAAG	3 cut(s)	274, 623, 759
Eco88I	CYCGRG	1 cut(s)	266
EcoNI	CCTNNNNNAGG	2 cut(s)	158, 182
EcoO109I	RGGNCCY	1 cut(s)	175
EcoRII	CCWGG	1 cut(s)	195
EcoT14I	CCWWGG	1 cut(s)	183
EcoT22I	ATGCAT	1 cut(s)	1495
ErhI	CCWWGG	1 cut(s)	183
FaeI	CATG	6 cut(s)	130, 335, 578, 1040, 1253, 1675
FalI	AAGNNNNNCTT	4 cut(s)	272, 304, 426, 458
FaqI	GGGAC	3 cut(s)	535, 881, 1613
FatI	CATG	6 cut(s)	126, 331, 574, 1036, 1249, 1671
FblI	GTMKAC	2 cut(s)	1204, 1708
FokI	GGATG	8 cut(s)	518, 670, 712, 959, 1347, 1592, 1697, 1721
FspBI	CTAG	1 cut(s)	1574
GlaI	GCGC	2 cut(s)	53, 345
GsaI	CCCAGC	2 cut(s)	657, 1044
GsuI	CTGGAG	1 cut(s)	1554
HaeII	RGCGCY	1 cut(s)	55
HaeIII	GGCC	2 cut(s)	272, 481
HapII	CCGG	7 cut(s)	46, 83, 372, 393, 536, 698, 899
HgaI	GACGC	3 cut(s)	112, 1088, 1579
HhaI	GCGC	2 cut(s)	54, 346
Hin1I	GRCGYC	2 cut(s)	123, 1099
Hin1II	CATG	6 cut(s)	130, 335, 578, 1040, 1253, 1675
Hin6I	GCGC	2 cut(s)	52, 344
HinP1I	GCGC	2 cut(s)	52, 344
HincII	GTYRAC	1 cut(s)	1368
HindII	GTYRAC	1 cut(s)	1368
HindIII	AAGCTT	2 cut(s)	879, 1787
HinfI	GANTC	7 cut(s)	256, 734, 983, 1214, 1588, 1604, 1645
HpaI	GTTAAC	1 cut(s)	1368
HpaII	CCGG	7 cut(s)	46, 83, 372, 393, 536, 698, 899
HphI	GGTGA	2 cut(s)	1315, 1447
Hpy166II	GTNNAC	7 cut(s)	328, 1192, 1205, 1213, 1368, 1660, 1709
Hpy188III	TCNNGA	8 cut(s)	91, 127, 154, 166, 785, 869, 1631, 1661
Hpy8I	GTNNAC	7 cut(s)	328, 1192, 1205, 1213, 1368, 1660, 1709
HpyAV	CCTTC	6 cut(s)	163, 283, 741, 783, 1426, 1448
HpyCH4III	ACNGT	1 cut(s)	1760
HpyCH4IV	ACGT	1 cut(s)	1207
HpyF3I	CTNAG	6 cut(s)	404, 446, 613, 1103, 1184, 1719
HpySE526I	ACGT	1 cut(s)	1207
Hsp92I	GRCGYC	2 cut(s)	123, 1099
Hsp92II	CATG	6 cut(s)	130, 335, 578, 1040, 1253, 1675
HspAI	GCGC	2 cut(s)	52, 344
KspAI	GTTAAC	1 cut(s)	1368
Kzo9I	GATC	9 cut(s)	87, 136, 208, 619, 634, 701, 1081, 1292, 1396
LguI	GCTCTTC	1 cut(s)	447
LmnI	GCTCC	5 cut(s)	82, 538, 854, 871, 911
Lsp1109I	GCAGC	8 cut(s)	22, 784, 787, 799, 811, 827, 842, 1528
LweI	GCATC	5 cut(s)	1142, 1296, 1325, 1480, 1743
MaeI	CTAG	1 cut(s)	1574
MaeII	ACGT	1 cut(s)	1207
MaeIII	GTNAC	3 cut(s)	293, 410, 1138
MalI	GATC	9 cut(s)	89, 138, 210, 621, 636, 703, 1083, 1294, 1398
MboI	GATC	9 cut(s)	87, 136, 208, 619, 634, 701, 1081, 1292, 1396
MboII	GAAGA	9 cut(s)	235, 268, 280, 434, 629, 935, 983, 1302, 1570
MflI	RGATCY	2 cut(s)	701, 1081
MhlI	GDGCHC	3 cut(s)	330, 995, 1258
MluCI	AATT	5 cut(s)	379, 484, 606, 941, 1222
MlyI	GAGTC	2 cut(s)	992, 1208
Mph1103I	ATGCAT	1 cut(s)	1495
MroXI	GAANNNNTTC	1 cut(s)	441
MseI	TTAA	8 cut(s)	432, 714, 845, 1109, 1272, 1367, 1419, 1622
MslI	CAYNNNNRTG	1 cut(s)	1488
MspA1I	CMGCKG	2 cut(s)	403, 833
MspCI	CTTAAG	1 cut(s)	1108
MspI	CCGG	7 cut(s)	46, 83, 372, 393, 536, 698, 899
MspR9I	CCNGG	3 cut(s)	197, 699, 899
Mva1269I	GAATGC	1 cut(s)	346
MvaI	CCWGG	1 cut(s)	197
NciI	CCSGG	2 cut(s)	699, 899
NdeII	GATC	9 cut(s)	87, 136, 208, 619, 634, 701, 1081, 1292, 1396
NlaIII	CATG	6 cut(s)	130, 335, 578, 1040, 1253, 1675
NlaIV	GGNNCC	5 cut(s)	78, 540, 703, 1008, 1083
NmuCI	GTSAC	2 cut(s)	293, 410
NsiI	ATGCAT	1 cut(s)	1495
NspI	RCATGY	2 cut(s)	578, 1675
PaeR7I	CTCGAG	1 cut(s)	266
PagI	TCATGA	1 cut(s)	126
PceI	AGGCCT	1 cut(s)	272
PciI	ACATGT	1 cut(s)	1671
PciSI	GCTCTTC	1 cut(s)	447
PctI	GAATGC	1 cut(s)	346
PdmI	GAANNNNTTC	1 cut(s)	441
PfeI	GAWTC	5 cut(s)	256, 734, 1588, 1604, 1645
PflMI	CCANNNNNTGG	1 cut(s)	1238
PfoI	TCCNGGA	2 cut(s)	697, 897
PleI	GAGTC	2 cut(s)	991, 1208
PpsI	GAGTC	2 cut(s)	991, 1208
Ppu21I	YACGTR	1 cut(s)	1208
PpuMI	RGGWCCY	1 cut(s)	175
PscI	ACATGT	1 cut(s)	1671
PshAI	GACNNNNGTC	2 cut(s)	161, 197
PsiI	TTATAA	1 cut(s)	1227
Psp5II	RGGWCCY	1 cut(s)	175
Psp6I	CCWGG	1 cut(s)	195
PspFI	CCCAGC	2 cut(s)	653, 1040
PspGI	CCWGG	1 cut(s)	195
PspN4I	GGNNCC	5 cut(s)	78, 540, 703, 1008, 1083
PspPI	GGNCC	5 cut(s)	163, 175, 480, 901, 1376
PspPPI	RGGWCCY	1 cut(s)	175
PspXI	VCTCGAGB	1 cut(s)	266
PstI	CTGCAG	3 cut(s)	419, 817, 1546
PstNI	CAGNNNCTG	1 cut(s)	414
PsuI	RGATCY	2 cut(s)	701, 1081
PvuII	CAGCTG	2 cut(s)	403, 833
RsaI	GTAC	5 cut(s)	510, 596, 1193, 1667, 1775
RsaNI	GTAC	5 cut(s)	509, 595, 1192, 1666, 1774
RseI	CAYNNNNRTG	1 cut(s)	1488
SapI	GCTCTTC	1 cut(s)	447
SaqAI	TTAA	8 cut(s)	432, 714, 845, 1109, 1272, 1367, 1419, 1622
Sau3AI	GATC	9 cut(s)	87, 136, 208, 619, 634, 701, 1081, 1292, 1396
Sau96I	GGNCC	5 cut(s)	163, 175, 480, 901, 1376
SchI	GAGTC	2 cut(s)	992, 1208
ScrFI	CCNGG	3 cut(s)	197, 699, 899
SduI	GDGCHC	3 cut(s)	330, 995, 1258
SfaNI	GCATC	5 cut(s)	1142, 1296, 1325, 1480, 1743
SfcI	CTRYAG	4 cut(s)	25, 415, 813, 1542
Sfr274I	CTCGAG	1 cut(s)	266
SinI	GGWCC	4 cut(s)	163, 175, 901, 1376
SlaI	CTCGAG	1 cut(s)	266
SmiMI	CAYNNNNRTG	1 cut(s)	1488
SmlI	CTYRAG	3 cut(s)	266, 785, 1108
SmoI	CTYRAG	3 cut(s)	266, 785, 1108
Sse9I	AATT	5 cut(s)	379, 484, 606, 941, 1222
SseBI	AGGCCT	1 cut(s)	272
SsiI	CCGC	9 cut(s)	49, 58, 80, 148, 250, 828, 1096, 1338, 1502
SspI	AATATT	1 cut(s)	1180
SspMI	CTAG	1 cut(s)	1574
StuI	AGGCCT	1 cut(s)	272
StyD4I	CCNGG	3 cut(s)	195, 697, 897
StyI	CCWWGG	1 cut(s)	183
TaaI	ACNGT	1 cut(s)	1760
TaiI	ACGT	1 cut(s)	1210
TaqI	TCGA	3 cut(s)	135, 267, 1803
TaqII	GACCGA	1 cut(s)	173
TasI	AATT	5 cut(s)	379, 484, 606, 941, 1222
TatI	WGTACW	2 cut(s)	508, 1773
TauI	GCSGC	5 cut(s)	52, 830, 1099, 1341, 1504
TfiI	GAWTC	5 cut(s)	256, 734, 1588, 1604, 1645
Tru1I	TTAA	8 cut(s)	432, 714, 845, 1109, 1272, 1367, 1419, 1622
Tru9I	TTAA	8 cut(s)	432, 714, 845, 1109, 1272, 1367, 1419, 1622
TscAI	CASTG	4 cut(s)	298, 415, 424, 566
TseFI	GTSAC	2 cut(s)	293, 410
TseI	GCWGC	8 cut(s)	10, 797, 800, 812, 815, 824, 830, 1541
Tsp45I	GTSAC	2 cut(s)	293, 410
TspDTI	ATGAA	5 cut(s)	353, 954, 963, 1025, 1571
TspGWI	ACGGA	2 cut(s)	531, 1771
TspRI	CASTG	4 cut(s)	298, 415, 424, 566
Van91I	CCANNNNNTGG	1 cut(s)	1238
Vha464I	CTTAAG	1 cut(s)	1108
VneI	GTGCAC	1 cut(s)	326
VpaK11BI	GGWCC	4 cut(s)	163, 175, 901, 1376
XagI	CCTNNNNNAGG	2 cut(s)	158, 182
XceI	RCATGY	2 cut(s)	578, 1675
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1239
XhoI	CTCGAG	1 cut(s)	266
XmiI	GTMKAC	2 cut(s)	1204, 1708
XmnI	GAANNNNTTC	1 cut(s)	441
XspI	CTAG	1 cut(s)	1574
Zsp2I	ATGCAT	1 cut(s)	1495

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.