Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0004986

Physical Location & Seq

Genomic Coordinates Reverse (-)

16670942 .. 16679260

Gene Structure 8319 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000027911

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2151 bp

ATGAGTAAATTTAACCGTTTGAAGAACTTGAATCAAAAGAGACATGTGGACAACATTCGTATTACCAAGACTTTGATTTCAGCTGTGAAGATGTTGGAGAAGATTGGAGAGTTCAACATGGAGAAGGTCATAGAGGATTTTGAAGCAATGACAAGTGATGCGGAGAGGATCCAGAAGGAGACCCTCAAGAAGATTCTTGAACAAAACAGATCCGCGGAGTACTTGCAGTTTCTGGGACTCAATGGAAGAACTGACCTGGAGAGTTTCAAGAGGGTTGTTCCTCTTGTTACGCACACGGATTTGGACCCTTATATTCAGAGAATTGCAGATGGTGATTCCTCTCCAGTTCTCACTGGAAAACCAATCACAACATTCTCACTGAGTTCTGGTACTACTCAAGGAAGGTCAAAGTTTATACCATTCAATGATGAACTGATGGAAAATACCATGCAGATATATCAAACCTCTTTTGCCTTCAGAAACAGGGAGTTTCCTATTGGGAATGGGAAGGCCTTACAGTTCATCTATGGAAGCAAGCAGTTCCAAACTAAAGGTGGTTTGGCAGCTGGAACTGCCACCACCAATGTTTACCGTTGTTCGAAGTTCAAGGAGACAATGAAGGCAATGCAGACCCCTTGCTGCAGCCCTGATGAAGTAATATTTGGTCTTGAGTTCCACCAATCCCTTTATTGCCATCTGTTATGTGGACTGTTATTCAGTGATGAAGTTCAGTTGGTATCCTCAACATTTGCTCACAGCATAGTCCAAGCCTTCAGAACCTTTGAGCTATTGTGGGAGGAACTATGTGCTGACATTCGAGATGGCAGTCTCAGCAACCGGATCACAGTCCCATCAATCCGTGCAGCCATGTTGAAATTACTCAAGCCAAACCCGGAATTGGCTGAATCGGTTTACAGAAAATGTTCAGGACTGAGTAACTGGTATGGACTGATACCAGCCCTTTTTCCAAATGCCAAGTACATATATGGTGTTATGACTGGGTCAATGGAGCTTTATTTGAACAAGCTGAGGCACTATGCAGCGGACTTACCTTTGTTGAGTGCTGATTATGGTGCTTCTGAAGGTTGGATTGCAGCAAATGTCAACCCAAAGGTACCAACTGAGATGACCACTTATGTTGTGCTCCCTAATATTGGCTACTTCGAATTCATCCCTGTTAAGGATGGCATTGATTTCAAGCCAGTGGGTCTTACTGAAGTGAAAATTGGTGAAGAGTATGAGGTTGTGGTCACTAATTTTGCAGGTTTGTACCGATATAGACTAGGAGATGTAGTGAAGGTGATGGGGTTCCATAACTCGACACCTGAGCTCAAATTCCTCTGCCGTAGCAATCTTCTGCTCACCATCAACATTGACAAGAACACTGAGAAAGATTTGCAGATATCTGTTGAAGAAGCAGCCAAGCTTTTAGCTGCAGAAAAGTTAGAAGTTGTTGATTTTTCAAGCCATGTAGACTTGTCCACAGACCCTGGTCACTATGTGATCTTCTGGGAACTTAGTGGTGAAGCATCCCAAGAGGTTCTCAGTGAATGCTGCAACTGTTTGGACAAGTGTTTTGTGGATGCAGGCTACAGGAGCTCAAGGAAAGTCAACGGAATAGGTCCACTCGAGCTCCGAATTCTTCGGAAGGGGACTTTCCAAAAGGTTCTCAACCATTACCTTGCACAAGGATCTGCTGTTAACCAGTTCAAGACCCCAAGATGTGTAGGGGTTAACAACAGCAAGGAAACAGTGGAAGGCAAAGGAGATCATGAAGCAGCATTGGCTATATGGGACTGTGGCAGCCCCTTGTATGACTCGTATGAGCTGGCATCGGTTAGTCATCTAATCGAGCGCCATCTGATGGCATTCCCATCTCTTGGAGGATCATCGAAGCGGTTCATAGCCAAGTTCTCTCATTCTTCTTCATCGAAGACGACCTCCACTACTAGTACTAGTACTACAATGAAGGAGGCAAAAGGGTCTAATTCAATGGAGGAAAACTTGAGCAAGATCTTGGGGATCAAGAAGATGTGGAAGAGGAAGGGTTTGTTTGGAGCAACGAAAGAAAAGACCAAGAAAATGAAGACTACTGGATTTTCTGGCTTTTACAGTAGGTTTGGTCTCTGGAGGAAAAAGGAATGCAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

GH3

Protein Analysis

717

Amino Acids

80.34

Weight (kDa)

8.76

Isoelectric Point (pI)

31.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GH3	PF03321	44 - 352	1.7e-111	GH3 family N-terminal domain
GH3_M	PF23571	379 - 449	3.8e-28	GH3 family central domain
GH3_C	PF23572	465 - 576	3e-33	GH3 family C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004986)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46370 AT2G46370 AT2G46370 AT2G46370
fragaria_vesca	FvH4_7g16040 FvH4_7g16040 FvH4_7g16040 FvH4_7g16040 FvH4_7g16040 FvH4_7g16040
malus_domestica	MD01G1076500.v1.1 MD07G1145900.v1.1
prunus_persica	Prupe.2G184100_v2.0.a1 Prupe.2G184100_v2.0.a1 Prupe.2G184100_v2.0.a1 Prupe.2G184100_v2.0.a1
pyrus_communis	pycom01g10570 pycom07g14550 pycom07g14560
rosa_chinensis	RchiOBHm_Chr1g0358981
rosa_laevigata	RLG00000027911
rosa_multiflora	Rmu_sc0004044.1_g000003
rosa_roxburghii	Rroxscaffold_4G00297490
rosa_rugosa	Rorug01G0266700 Rorug01G0266800.1
rosa_samantha	Rh1AG280100 Rh1BG247100 Rh1CG264500 Rh1DG275400
rosa_wichuraiana	Rw1G024900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2136
Acc36I	ACCTGC	2 cut(s)	1253, 2136
Acc65I	GGTACC	1 cut(s)	1114
AccB1I	GGYRCC	1 cut(s)	1114
AccB7I	CCANNNNNTGG	2 cut(s)	1864, 1880
AccI	GTMKAC	1 cut(s)	1473
AccII	CGCG	1 cut(s)	215
AciI	CCGC	5 cut(s)	161, 213, 215, 1043, 1897
AclWI	GGATC	7 cut(s)	163, 176, 204, 848, 1699, 1894, 2030
AcsI	RAATTY	4 cut(s)	8, 1166, 1334, 1638
AcuI	CTGAAG	4 cut(s)	460, 757, 1101, 1236
AdeI	CACNNNGTG	1 cut(s)	1501
AfaI	GTAC	7 cut(s)	221, 391, 980, 1116, 1271, 1954, 1960
AfiI	CCNNNNNNNGG	5 cut(s)	898, 1154, 1180, 1864, 1880
AflIII	ACRYGT	1 cut(s)	43
AhlI	ACTAGT	2 cut(s)	1949, 1955
AjnI	CCWGG	2 cut(s)	255, 1489
AjuI	GAANNNNNNNTTGG	4 cut(s)	645, 677, 1209, 1241
Alw21I	GWGCWC	4 cut(s)	1146, 1332, 1601, 1635
Alw26I	GTCTC	5 cut(s)	34, 173, 605, 833, 2129
AlwI	GGATC	7 cut(s)	163, 176, 204, 848, 1699, 1894, 2030
AlwNI	CAGNNNCTG	2 cut(s)	232, 1490
Ama87I	CYCGRG	1 cut(s)	1628
AoxI	GGCC	1 cut(s)	510
ApoI	RAATTY	4 cut(s)	8, 1166, 1334, 1638
ArsI	GACNNNNNNTTYG	2 cut(s)	1559, 1591
Asp700I	GAANNNNTTC	2 cut(s)	922, 1898
Asp718I	GGTACC	1 cut(s)	1114
AspLEI	GCGC	1 cut(s)	1857
AspS9I	GGNCC	2 cut(s)	304, 1622
AsuC2I	CCSGG	1 cut(s)	893
AsuHPI	GGTGA	5 cut(s)	344, 1241, 1312, 1354, 1535
AsuII	TTCGAA	2 cut(s)	599, 1164
AvaI	CYCGRG	1 cut(s)	1628
AvaII	GGWCC	2 cut(s)	304, 1622
BamHI	GGATCC	1 cut(s)	168
BanI	GGYRCC	1 cut(s)	1114
BanII	GRGCYC	3 cut(s)	1332, 1601, 1635
BbsI	GAAGAC	2 cut(s)	1940, 2093
Bbv12I	GWGCWC	4 cut(s)	1146, 1332, 1601, 1635
BbvCI	CCTCAGC	1 cut(s)	1028
BceAI	ACGGC	1 cut(s)	1329
BciT130I	CCWGG	2 cut(s)	257, 1491
BciVI	GTATCC	1 cut(s)	748
BcnI	CCSGG	1 cut(s)	893
BcoDI	GTCTC	5 cut(s)	34, 173, 605, 833, 2129
BcuI	ACTAGT	2 cut(s)	1949, 1955
BfaI	CTAG	3 cut(s)	1283, 1950, 1956
BfmI	CTRYAG	3 cut(s)	640, 1434, 1591
BfoI	RGCGCY	1 cut(s)	1858
BfuAI	ACCTGC	2 cut(s)	1253, 2136
BfuI	GTATCC	1 cut(s)	748
BglII	AGATCT	1 cut(s)	2013
BmcAI	AGTACT	3 cut(s)	221, 1954, 1960
Bme1390I	CCNGG	3 cut(s)	257, 893, 1491
Bme18I	GGWCC	2 cut(s)	304, 1622
BmeT110I	CYCGRG	1 cut(s)	1628
BmgT120I	GGNCC	2 cut(s)	304, 1622
BmiI	GGNNCC	4 cut(s)	170, 306, 1116, 1310
BmrFI	CCNGG	3 cut(s)	257, 893, 1491
BmrI	ACTGGG	1 cut(s)	1008
BmsI	GCATC	4 cut(s)	148, 1538, 1573, 1841
BmuI	ACTGGG	1 cut(s)	1008
BoxI	GACNNNNGTC	1 cut(s)	1491
BpiI	GAAGAC	2 cut(s)	1940, 2093
BpmI	CTGGAG	3 cut(s)	278, 327, 2149
Bpu10I	CCTNAGC	2 cut(s)	1028, 1326
Bpu14I	TTCGAA	2 cut(s)	599, 1164
BpuEI	CTTGAG	6 cut(s)	170, 381, 689, 866, 1585, 2026
BpuMI	CCSGG	1 cut(s)	893
BsaI	GGTCTC	2 cut(s)	173, 2129
BsaJI	CCNNGG	2 cut(s)	213, 1489
BsaWI	WCCGGW	1 cut(s)	837
BsaXI	ACNNNNNCTCC	4 cut(s)	1278, 1308, 1617, 1647
Bsc4I	CCNNNNNNNGG	5 cut(s)	898, 1154, 1180, 1864, 1880
Bse1I	ACTGG	7 cut(s)	344, 358, 944, 1003, 1202, 1705, 2098
Bse3DI	GCAATG	2 cut(s)	153, 630
BseBI	CCWGG	2 cut(s)	257, 1491
BseDI	CCNNGG	2 cut(s)	213, 1489
BseGI	GGATG	4 cut(s)	1170, 1189, 1529, 1588
BseLI	CCNNNNNNNGG	5 cut(s)	898, 1154, 1180, 1864, 1880
BseMI	GCAATG	2 cut(s)	153, 630
BseMII	CTCAG	8 cut(s)	371, 844, 923, 1019, 1113, 1317, 1377, 1558
BseNI	ACTGG	7 cut(s)	344, 358, 944, 1003, 1202, 1705, 2098
BsgI	GTGCAG	1 cut(s)	882
Bsh1236I	CGCG	1 cut(s)	215
BshFI	GGCC	1 cut(s)	512
BshNI	GGYRCC	1 cut(s)	1114
BsiHKAI	GWGCWC	4 cut(s)	1146, 1332, 1601, 1635
BsiHKCI	CYCGRG	1 cut(s)	1628
BsiSI	CCGG	2 cut(s)	838, 893
BslFI	GGGAC	4 cut(s)	249, 833, 1666, 1808
BslI	CCNNNNNNNGG	5 cut(s)	898, 1154, 1180, 1864, 1880
BsmAI	GTCTC	5 cut(s)	34, 173, 605, 833, 2129
BsmFI	GGGAC	4 cut(s)	249, 833, 1666, 1808
BsmI	GAATGC	3 cut(s)	1556, 1868, 2147
BsnI	GGCC	1 cut(s)	512
Bso31I	GGTCTC	2 cut(s)	173, 2129
BsoBI	CYCGRG	1 cut(s)	1628
Bsp119I	TTCGAA	2 cut(s)	599, 1164
Bsp1286I	GDGCHC	4 cut(s)	1146, 1332, 1601, 1635
Bsp143I	GATC	9 cut(s)	168, 209, 840, 1503, 1691, 1768, 1886, 2013, 2022
BspACI	CCGC	5 cut(s)	161, 213, 215, 1043, 1897
BspANI	GGCC	1 cut(s)	512
BspCNI	CTCAG	8 cut(s)	372, 843, 924, 1020, 1114, 1318, 1378, 1557
BspFNI	CGCG	1 cut(s)	215
BspHI	TCATGA	1 cut(s)	1771
BspLI	GGNNCC	4 cut(s)	170, 306, 1116, 1310
BspMAI	CTGCAG	2 cut(s)	644, 1438
BspMI	ACCTGC	2 cut(s)	1253, 2136
BspPI	GGATC	7 cut(s)	163, 176, 204, 848, 1699, 1894, 2030
BspT104I	TTCGAA	2 cut(s)	599, 1164
BspT107I	GGYRCC	1 cut(s)	1114
BspTNI	GGTCTC	2 cut(s)	173, 2129
BsrDI	GCAATG	2 cut(s)	153, 630
BsrI	ACTGG	7 cut(s)	344, 358, 944, 1003, 1202, 1705, 2098
BssECI	CCNNGG	2 cut(s)	213, 1489
BssMI	GATC	9 cut(s)	168, 209, 840, 1503, 1691, 1768, 1886, 2013, 2022
Bst2UI	CCWGG	2 cut(s)	257, 1491
Bst4CI	ACNGT	9 cut(s)	17, 519, 593, 711, 847, 1562, 1753, 1799, 2114
Bst6I	CTCTTC	2 cut(s)	1227, 2033
BstBI	TTCGAA	2 cut(s)	599, 1164
BstC8I	GCNNGC	3 cut(s)	536, 1588, 1830
BstDEI	CTNAG	9 cut(s)	380, 830, 932, 1028, 1122, 1326, 1386, 1517, 1544
BstDSI	CCRYGG	1 cut(s)	213
BstF5I	GGATG	4 cut(s)	1170, 1189, 1529, 1588
BstFNI	CGCG	1 cut(s)	215
BstH2I	RGCGCY	1 cut(s)	1858
BstHHI	GCGC	1 cut(s)	1857
BstKTI	GATC	9 cut(s)	171, 212, 843, 1506, 1694, 1771, 1889, 2016, 2025
BstMAI	GTCTC	5 cut(s)	34, 173, 605, 833, 2129
BstMBI	GATC	9 cut(s)	168, 209, 840, 1503, 1691, 1768, 1886, 2013, 2022
BstMWI	GCNNNNNNNGC	4 cut(s)	572, 831, 1596, 1784
BstNI	CCWGG	2 cut(s)	257, 1491
BstNSI	RCATGY	1 cut(s)	47
BstPAI	GACNNNNGTC	1 cut(s)	1491
BstSCI	CCNGG	3 cut(s)	255, 891, 1489
BstSFI	CTRYAG	3 cut(s)	640, 1434, 1591
BstUI	CGCG	1 cut(s)	215
BstV2I	GAAGAC	2 cut(s)	1940, 2093
BstX2I	RGATCY	4 cut(s)	168, 209, 1691, 2013
BstYI	RGATCY	4 cut(s)	168, 209, 1691, 2013
BsuI	GTATCC	1 cut(s)	748
BsuRI	GGCC	1 cut(s)	512
BtgI	CCRYGG	1 cut(s)	213
BtsCI	GGATG	4 cut(s)	1170, 1189, 1529, 1588
BtsIMutI	CAGTG	7 cut(s)	351, 377, 724, 1209, 1383, 1552, 1758
BveI	ACCTGC	2 cut(s)	1253, 2136
Cac8I	GCNNGC	3 cut(s)	536, 1588, 1830
CaiI	CAGNNNCTG	2 cut(s)	232, 1490
CciI	TCATGA	1 cut(s)	1771
CfoI	GCGC	1 cut(s)	1857
Cfr13I	GGNCC	2 cut(s)	304, 1622
Cfr42I	CCGCGG	1 cut(s)	216
Csp6I	GTAC	7 cut(s)	220, 390, 979, 1115, 1270, 1953, 1959
CspCI	CAANNNNNGTGG	2 cut(s)	1120, 1155
CviAII	CATG	6 cut(s)	44, 118, 448, 868, 1469, 1772
CviQI	GTAC	7 cut(s)	220, 390, 979, 1115, 1270, 1953, 1959
DdeI	CTNAG	9 cut(s)	380, 830, 932, 1028, 1122, 1326, 1386, 1517, 1544
DpnI	GATC	9 cut(s)	170, 211, 842, 1505, 1693, 1770, 1888, 2015, 2024
DpnII	GATC	9 cut(s)	168, 209, 840, 1503, 1691, 1768, 1886, 2013, 2022
DraIII	CACNNNGTG	1 cut(s)	1501
Eam1104I	CTCTTC	2 cut(s)	1227, 2033
EarI	CTCTTC	2 cut(s)	1227, 2033
Ecl136II	GAGCTC	3 cut(s)	1330, 1599, 1633
Eco147I	AGGCCT	1 cut(s)	512
Eco24I	GRGCYC	3 cut(s)	1332, 1601, 1635
Eco31I	GGTCTC	2 cut(s)	173, 2129
Eco32I	GATATC	1 cut(s)	1404
Eco47I	GGWCC	2 cut(s)	304, 1622
Eco53kI	GAGCTC	3 cut(s)	1330, 1599, 1633
Eco57I	CTGAAG	4 cut(s)	460, 757, 1101, 1236
Eco88I	CYCGRG	1 cut(s)	1628
EcoICRI	GAGCTC	3 cut(s)	1330, 1599, 1633
EcoRI	GAATTC	2 cut(s)	1166, 1638
EcoRII	CCWGG	2 cut(s)	255, 1489
EcoRV	GATATC	1 cut(s)	1404
EcoT38I	GRGCYC	3 cut(s)	1332, 1601, 1635
FaeI	CATG	6 cut(s)	47, 121, 451, 871, 1472, 1775
FaqI	GGGAC	4 cut(s)	249, 833, 1666, 1808
FatI	CATG	6 cut(s)	43, 117, 447, 867, 1468, 1771
FblI	GTMKAC	1 cut(s)	1473
FokI	GGATG	4 cut(s)	1157, 1196, 1516, 1595
FriOI	GRGCYC	3 cut(s)	1332, 1601, 1635
FspBI	CTAG	3 cut(s)	1283, 1950, 1956
GlaI	GCGC	1 cut(s)	1856
GsuI	CTGGAG	3 cut(s)	278, 327, 2149
HaeII	RGCGCY	1 cut(s)	1858
HaeIII	GGCC	1 cut(s)	512
HapII	CCGG	2 cut(s)	838, 893
HhaI	GCGC	1 cut(s)	1857
Hin1II	CATG	6 cut(s)	47, 121, 451, 871, 1472, 1775
Hin6I	GCGC	1 cut(s)	1855
HinP1I	GCGC	1 cut(s)	1855
HincII	GTYRAC	4 cut(s)	1105, 1612, 1702, 1735
HindII	GTYRAC	4 cut(s)	1105, 1612, 1702, 1735
HindIII	AAGCTT	1 cut(s)	1424
HinfI	GANTC	6 cut(s)	31, 193, 237, 335, 905, 1817
HpaI	GTTAAC	2 cut(s)	1702, 1735
HpaII	CCGG	2 cut(s)	838, 893
HphI	GGTGA	5 cut(s)	344, 1241, 1312, 1354, 1535
Hpy188I	TCNGA	7 cut(s)	318, 479, 776, 1081, 1637, 1647, 1863
HpyCH4III	ACNGT	9 cut(s)	17, 519, 593, 711, 847, 1562, 1753, 1799, 2114
HpyF10VI	GCNNNNNNNGC	4 cut(s)	572, 831, 1596, 1784
HpyF3I	CTNAG	9 cut(s)	380, 830, 932, 1028, 1122, 1326, 1386, 1517, 1544
Hsp92II	CATG	6 cut(s)	47, 121, 451, 871, 1472, 1775
HspAI	GCGC	1 cut(s)	1855
KpnI	GGTACC	1 cut(s)	1118
KspAI	GTTAAC	2 cut(s)	1702, 1735
KspI	CCGCGG	1 cut(s)	216
Kzo9I	GATC	9 cut(s)	168, 209, 840, 1503, 1691, 1768, 1886, 2013, 2022
LmnI	GCTCC	5 cut(s)	1009, 1149, 1596, 1638, 2057
LweI	GCATC	4 cut(s)	148, 1538, 1573, 1841
MaeI	CTAG	3 cut(s)	1283, 1950, 1956
MaeIII	GTNAC	4 cut(s)	286, 935, 1249, 1493
MalI	GATC	9 cut(s)	170, 211, 842, 1505, 1693, 1770, 1888, 2015, 2024
MboI	GATC	9 cut(s)	168, 209, 840, 1503, 1691, 1768, 1886, 2013, 2022
MflI	RGATCY	4 cut(s)	168, 209, 1691, 2013
MhlI	GDGCHC	4 cut(s)	1146, 1332, 1601, 1635
MlyI	GAGTC	2 cut(s)	231, 1811
MmeI	TCCRAC	2 cut(s)	75, 1067
MroXI	GAANNNNTTC	2 cut(s)	922, 1898
MseI	TTAA	4 cut(s)	12, 1179, 1701, 1734
MspA1I	CMGCKG	4 cut(s)	83, 215, 566, 1043
MspI	CCGG	2 cut(s)	838, 893
MspR9I	CCNGG	3 cut(s)	257, 893, 1491
Mva1269I	GAATGC	3 cut(s)	1556, 1868, 2147
MvaI	CCWGG	2 cut(s)	257, 1491
MvnI	CGCG	1 cut(s)	215
MwoI	GCNNNNNNNGC	4 cut(s)	572, 831, 1596, 1784
NciI	CCSGG	1 cut(s)	893
NdeII	GATC	9 cut(s)	168, 209, 840, 1503, 1691, 1768, 1886, 2013, 2022
NlaIII	CATG	6 cut(s)	47, 121, 451, 871, 1472, 1775
NlaIV	GGNNCC	4 cut(s)	170, 306, 1116, 1310
NmuCI	GTSAC	2 cut(s)	1249, 1493
NspI	RCATGY	1 cut(s)	47
NspV	TTCGAA	2 cut(s)	599, 1164
PaeR7I	CTCGAG	1 cut(s)	1628
PagI	TCATGA	1 cut(s)	1771
PaqCI	CACCTGC	1 cut(s)	2136
PceI	AGGCCT	1 cut(s)	512
PciI	ACATGT	1 cut(s)	43
PctI	GAATGC	3 cut(s)	1556, 1868, 2147
PdmI	GAANNNNTTC	2 cut(s)	922, 1898
PfeI	GAWTC	4 cut(s)	31, 193, 335, 905
PflFI	GACNNNGTC	1 cut(s)	1000
PflMI	CCANNNNNTGG	2 cut(s)	1864, 1880
PleI	GAGTC	2 cut(s)	231, 1811
PpsI	GAGTC	2 cut(s)	231, 1811
PscI	ACATGT	1 cut(s)	43
PshAI	GACNNNNGTC	1 cut(s)	1491
Psp124BI	GAGCTC	3 cut(s)	1332, 1601, 1635
Psp6I	CCWGG	2 cut(s)	255, 1489
PspGI	CCWGG	2 cut(s)	255, 1489
PspN4I	GGNNCC	4 cut(s)	170, 306, 1116, 1310
PspPI	GGNCC	2 cut(s)	304, 1622
PspXI	VCTCGAGB	1 cut(s)	1628
PstI	CTGCAG	2 cut(s)	644, 1438
PstNI	CAGNNNCTG	2 cut(s)	232, 1490
PsuI	RGATCY	4 cut(s)	168, 209, 1691, 2013
PsyI	GACNNNGTC	1 cut(s)	1000
PvuII	CAGCTG	2 cut(s)	83, 566
RsaI	GTAC	7 cut(s)	221, 391, 980, 1116, 1271, 1954, 1960
RsaNI	GTAC	7 cut(s)	220, 390, 979, 1115, 1270, 1953, 1959
SacI	GAGCTC	3 cut(s)	1332, 1601, 1635
SacII	CCGCGG	1 cut(s)	216
SaqAI	TTAA	4 cut(s)	12, 1179, 1701, 1734
Sau3AI	GATC	9 cut(s)	168, 209, 840, 1503, 1691, 1768, 1886, 2013, 2022
Sau96I	GGNCC	2 cut(s)	304, 1622
ScaI	AGTACT	3 cut(s)	221, 1954, 1960
SchI	GAGTC	2 cut(s)	231, 1811
ScrFI	CCNGG	3 cut(s)	257, 893, 1491
SduI	GDGCHC	4 cut(s)	1146, 1332, 1601, 1635
SfaNI	GCATC	4 cut(s)	148, 1538, 1573, 1841
SfcI	CTRYAG	3 cut(s)	640, 1434, 1591
Sfr274I	CTCGAG	1 cut(s)	1628
Sfr303I	CCGCGG	1 cut(s)	216
SfuI	TTCGAA	2 cut(s)	599, 1164
SgrBI	CCGCGG	1 cut(s)	216
SinI	GGWCC	2 cut(s)	304, 1622
SlaI	CTCGAG	1 cut(s)	1628
SmlI	CTYRAG	7 cut(s)	185, 396, 668, 881, 1600, 1628, 2005
SmoI	CTYRAG	7 cut(s)	185, 396, 668, 881, 1600, 1628, 2005
SpeI	ACTAGT	2 cut(s)	1949, 1955
SseBI	AGGCCT	1 cut(s)	512
SsiI	CCGC	5 cut(s)	161, 213, 215, 1043, 1897
SspI	AATATT	2 cut(s)	660, 1153
SspMI	CTAG	3 cut(s)	1283, 1950, 1956
SstI	GAGCTC	3 cut(s)	1332, 1601, 1635
StuI	AGGCCT	1 cut(s)	512
StyD4I	CCNGG	3 cut(s)	255, 891, 1489
TaaI	ACNGT	9 cut(s)	17, 519, 593, 711, 847, 1562, 1753, 1799, 2114
TaqI	TCGA	8 cut(s)	599, 817, 1164, 1319, 1629, 1851, 1892, 1931
TatI	WGTACW	4 cut(s)	219, 978, 1952, 1958
TfiI	GAWTC	4 cut(s)	31, 193, 335, 905
Tru1I	TTAA	4 cut(s)	12, 1179, 1701, 1734
Tru9I	TTAA	4 cut(s)	12, 1179, 1701, 1734
TscAI	CASTG	7 cut(s)	358, 384, 724, 1209, 1390, 1552, 1758
TseFI	GTSAC	2 cut(s)	1249, 1493
Tsp45I	GTSAC	2 cut(s)	1249, 1493
TspGWI	ACGGA	3 cut(s)	311, 848, 1629
TspRI	CASTG	7 cut(s)	358, 384, 724, 1209, 1390, 1552, 1758
Tth111I	GACNNNGTC	1 cut(s)	1000
Van91I	CCANNNNNTGG	2 cut(s)	1864, 1880
VpaK11BI	GGWCC	2 cut(s)	304, 1622
XapI	RAATTY	4 cut(s)	8, 1166, 1334, 1638
XceI	RCATGY	1 cut(s)	47
XcmI	CCANNNNNNNNNTGG	2 cut(s)	551, 701
XhoI	CTCGAG	1 cut(s)	1628
XmiI	GTMKAC	1 cut(s)	1473
XmnI	GAANNNNTTC	2 cut(s)	922, 1898
XspI	CTAG	3 cut(s)	1283, 1950, 1956
ZrmI	AGTACT	3 cut(s)	221, 1954, 1960

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.