Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0004986

Physical Location & Seq

Genomic Coordinates Reverse (-)

17384810 .. 17389485

Gene Structure 4676 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00297490.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1719 bp

ATGTTGGAGAAGATTGGAGAGTTCAACATGGAGAAGGTCATAGAGGATTTTGAAGCAATGACAAGTGATGCGGAGAGGATCCAGAAGGAGACCCTCAAGAAGATTCTTGAACAAAACACATCCGCGGAGTACTTGCAGCTTCTGGGACTCAATGGAAGAACTGACCTGGAGAGTTTCAAGAGGGTTGTTCCTCTTGTTACTCACACGGATTTGGACCCTTATATTCAGAGAATTGCAGATGGTGATTCCTCTCCAGTTCTCACTGGAAAACCAATCACAACATTCTCACTGAGTTCTGGTACTACTCAAGGACGGTCAAAGTTTATACCTTTCAATGATGAACTGATGGAAAATACCATGCAGATATATCAAACCTCTTTTGCCTTCAGAAACAGGGAGTTTCCTATTGGGAATGGGAAGGCCTTACAGTTCATCTATGGAAGCAAGCAGTTCCAAACTAAAGGTGGTTTGGCAGCTGGAACTGCCACCACCAATGTTTACCGTTGTTCGAAGTTCAAGGAGACAATGAAGGCAATGCAGACCCCTTGCTGCAGCCCTGATGAAGTAATATTTGGTCTTGAGTTCCACCAATCCCTTTATTGCCATCTGTTATGTGGACTGTTATTCAGTGATGAAGTTCAGTTGGTATCCTCAACATTTGCTCACAGCATAGTCCAAGCCTTCAGAACCTTTGAGCTATTGTGGGAGGAACTATGTGCTGACATTCGAGATGGCAGTCTCAGCAGCCGGATCACAGTCCCATCAATCCGTGCAGCCATGTTGAAATTACTCAAGCCAAACCCGGAATTGGCTGATTCGGTTTCCAGAAAATGTTCAGGACTGAGTAACTGGTATGGACTGATACCGGCCCTTTTTCCAAATGCCAAGTACATATATGGTGTTATGACTGGGTCAATGGAGCTTTATTTGAACAAGCTGAGGCACTATGCAGCGGACTTACCTTTGTTGAGTGCTGATTATGGTGCTTCTGAAGGTTGGATTGCAGCAAATGTCAACCCAAAGGTGCCAACTGAGATGACCACTTATGTTGTGCTCCCTAATATTGGCTACTTTGAATTCATCCCTGTTAGGGATGTCATTGATTTCAAGCCAGTGGGTCTTACTGAAGTGAAAATTGGTGAAGAGTATGAGGTTGTGGTCACTAATTTTGCAGGTTTGTACCGATATAGACTAGGAGATGTAGTGAAGGTGATGGGGTTCCATAACTCGACACCTGAGCTCAAATTCCTCTGCCGTAGCAATCTTCTGCTTACCGTCAACATTGACAAGAACACCGAGAAAGATTTGCAGATATCTGTTGAAGAAGCAGCCAAGCTTTTAGCTGCAGAAAAATTAGAAGTTGTCGATTTTTCAAGCCATGTAGACTTGTCCACAGACCCTGGTCACTATGTGATCTTCTGGGAACTTAGTGGTGAAGCATCCCGGGAGGTTCTCACTGAGTGCTGCAACTGTCTGGACAAGTCTTTTGTGGATGCAGGCTACAGGAGCTCAAGGAAAGTCAACGGAATAGGTCCACTCGAGCTCCGAATTCTTCGTAAGGGGACTTTCCAAAAGGTTCTCAACCATTACCTTGCACAAGGATCTGCTGTTAACCAGTTCAAGACCCCAAGATGTGTAGGGGTTAACAACAGCAAGGTTTTGCAAATCCTATGTGGCAATGTAGTTAGGAGCTTCACTAGTATTGCTTATAATATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

GH3

Protein Analysis

572

Amino Acids

63.97

Weight (kDa)

5.96

Isoelectric Point (pI)

28.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GH3	PF03321	14 - 322	6.6e-112	GH3 family N-terminal domain
GH3_M	PF23571	349 - 419	4.7e-28	GH3 family central domain
GH3_C	PF23572	435 - 546	1.6e-33	GH3 family C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004986)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46370 AT2G46370 AT2G46370 AT2G46370
fragaria_vesca	FvH4_7g16040 FvH4_7g16040 FvH4_7g16040 FvH4_7g16040 FvH4_7g16040 FvH4_7g16040
malus_domestica	MD01G1076500.v1.1 MD07G1145900.v1.1
prunus_persica	Prupe.2G184100_v2.0.a1 Prupe.2G184100_v2.0.a1 Prupe.2G184100_v2.0.a1 Prupe.2G184100_v2.0.a1
pyrus_communis	pycom01g10570 pycom07g14550 pycom07g14560
rosa_chinensis	RchiOBHm_Chr1g0358981
rosa_laevigata	RLG00000027911
rosa_multiflora	Rmu_sc0004044.1_g000003
rosa_roxburghii	Rroxscaffold_4G00297490
rosa_rugosa	Rorug01G0266700 Rorug01G0266800.1
rosa_samantha	Rh1AG280100 Rh1BG247100 Rh1CG264500 Rh1DG275400
rosa_wichuraiana	Rw1G024900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1710
Acc36I	ACCTGC	1 cut(s)	1163
AccB1I	GGYRCC	1 cut(s)	1024
AccI	GTMKAC	1 cut(s)	1383
AccII	CGCG	1 cut(s)	125
AciI	CCGC	4 cut(s)	71, 123, 125, 953
AclWI	GGATC	4 cut(s)	73, 86, 758, 1609
AcsI	RAATTY	3 cut(s)	1076, 1244, 1548
AcuI	CTGAAG	4 cut(s)	370, 667, 1011, 1146
AdeI	CACNNNGTG	2 cut(s)	1411, 1461
AfaI	GTAC	4 cut(s)	131, 301, 890, 1181
AfiI	CCNNNNNNNGG	3 cut(s)	808, 1064, 1090
AhlI	ACTAGT	1 cut(s)	1697
AjnI	CCWGG	2 cut(s)	165, 1399
AjuI	GAANNNNNNNTTGG	4 cut(s)	555, 587, 1119, 1151
Alw21I	GWGCWC	4 cut(s)	1056, 1242, 1511, 1545
Alw26I	GTCTC	3 cut(s)	83, 515, 743
AlwI	GGATC	4 cut(s)	73, 86, 758, 1609
AlwNI	CAGNNNCTG	2 cut(s)	142, 1400
Ama87I	CYCGRG	2 cut(s)	1443, 1538
AoxI	GGCC	2 cut(s)	420, 867
ApoI	RAATTY	3 cut(s)	1076, 1244, 1548
ArsI	GACNNNNNNTTYG	2 cut(s)	1469, 1501
Asp700I	GAANNNNTTC	1 cut(s)	832
AspS9I	GGNCC	3 cut(s)	214, 868, 1532
AsuC2I	CCSGG	3 cut(s)	803, 1444, 1445
AsuHPI	GGTGA	4 cut(s)	254, 1151, 1222, 1445
AsuII	TTCGAA	1 cut(s)	509
AvaI	CYCGRG	2 cut(s)	1443, 1538
AvaII	GGWCC	2 cut(s)	214, 1532
BamHI	GGATCC	1 cut(s)	78
BanI	GGYRCC	1 cut(s)	1024
BanII	GRGCYC	3 cut(s)	1242, 1511, 1545
Bbv12I	GWGCWC	4 cut(s)	1056, 1242, 1511, 1545
BbvCI	CCTCAGC	1 cut(s)	938
BccI	CCATC	6 cut(s)	233, 340, 612, 725, 769, 1207
BceAI	ACGGC	1 cut(s)	1239
BciT130I	CCWGG	2 cut(s)	167, 1401
BciVI	GTATCC	1 cut(s)	658
BcnI	CCSGG	3 cut(s)	803, 1444, 1445
BcoDI	GTCTC	3 cut(s)	83, 515, 743
BcuI	ACTAGT	1 cut(s)	1697
BfaI	CTAG	2 cut(s)	1193, 1698
BfmI	CTRYAG	3 cut(s)	550, 1344, 1501
BfuAI	ACCTGC	1 cut(s)	1163
BfuI	GTATCC	1 cut(s)	658
BmcAI	AGTACT	1 cut(s)	131
Bme1390I	CCNGG	5 cut(s)	167, 803, 1401, 1444, 1445
Bme18I	GGWCC	2 cut(s)	214, 1532
BmeT110I	CYCGRG	2 cut(s)	1443, 1538
BmgT120I	GGNCC	3 cut(s)	214, 868, 1532
BmiI	GGNNCC	4 cut(s)	80, 216, 1026, 1220
BmrFI	CCNGG	5 cut(s)	167, 803, 1401, 1444, 1445
BmrI	ACTGGG	1 cut(s)	918
BmsI	GCATC	3 cut(s)	58, 1448, 1483
BmuI	ACTGGG	1 cut(s)	918
BoxI	GACNNNNGTC	1 cut(s)	1401
BpmI	CTGGAG	2 cut(s)	188, 237
Bpu10I	CCTNAGC	2 cut(s)	938, 1236
Bpu14I	TTCGAA	1 cut(s)	509
BpuEI	CTTGAG	5 cut(s)	80, 291, 599, 776, 1495
BpuMI	CCSGG	3 cut(s)	803, 1444, 1445
BsaI	GGTCTC	1 cut(s)	83
BsaJI	CCNNGG	3 cut(s)	123, 1399, 1443
BsaXI	ACNNNNNCTCC	4 cut(s)	1188, 1218, 1527, 1557
Bsc4I	CCNNNNNNNGG	3 cut(s)	808, 1064, 1090
Bse118I	RCCGGY	1 cut(s)	865
Bse1I	ACTGG	6 cut(s)	254, 268, 854, 913, 1112, 1615
Bse3DI	GCAATG	3 cut(s)	63, 540, 1684
BseBI	CCWGG	2 cut(s)	167, 1401
BseDI	CCNNGG	3 cut(s)	123, 1399, 1443
BseGI	GGATG	5 cut(s)	119, 1080, 1099, 1439, 1498
BseLI	CCNNNNNNNGG	3 cut(s)	808, 1064, 1090
BseMI	GCAATG	3 cut(s)	63, 540, 1684
BseMII	CTCAG	7 cut(s)	281, 754, 833, 929, 1023, 1227, 1449
BseNI	ACTGG	6 cut(s)	254, 268, 854, 913, 1112, 1615
BsgI	GTGCAG	1 cut(s)	792
Bsh1236I	CGCG	1 cut(s)	125
BshFI	GGCC	2 cut(s)	422, 869
BshNI	GGYRCC	1 cut(s)	1024
BsiHKAI	GWGCWC	4 cut(s)	1056, 1242, 1511, 1545
BsiHKCI	CYCGRG	2 cut(s)	1443, 1538
BsiSI	CCGG	4 cut(s)	748, 803, 866, 1444
BslFI	GGGAC	3 cut(s)	159, 743, 1576
BslI	CCNNNNNNNGG	3 cut(s)	808, 1064, 1090
BsmAI	GTCTC	3 cut(s)	83, 515, 743
BsmFI	GGGAC	3 cut(s)	159, 743, 1576
BsnI	GGCC	2 cut(s)	422, 869
Bso31I	GGTCTC	1 cut(s)	83
BsoBI	CYCGRG	2 cut(s)	1443, 1538
Bsp119I	TTCGAA	1 cut(s)	509
Bsp1286I	GDGCHC	4 cut(s)	1056, 1242, 1511, 1545
Bsp143I	GATC	4 cut(s)	78, 750, 1413, 1601
BspACI	CCGC	4 cut(s)	71, 123, 125, 953
BspANI	GGCC	2 cut(s)	422, 869
BspCNI	CTCAG	7 cut(s)	282, 753, 834, 930, 1024, 1228, 1450
BspFNI	CGCG	1 cut(s)	125
BspLI	GGNNCC	4 cut(s)	80, 216, 1026, 1220
BspMAI	CTGCAG	2 cut(s)	554, 1348
BspMI	ACCTGC	1 cut(s)	1163
BspPI	GGATC	4 cut(s)	73, 86, 758, 1609
BspT104I	TTCGAA	1 cut(s)	509
BspT107I	GGYRCC	1 cut(s)	1024
BspTNI	GGTCTC	1 cut(s)	83
BsrDI	GCAATG	3 cut(s)	63, 540, 1684
BsrFI	RCCGGY	1 cut(s)	865
BsrI	ACTGG	6 cut(s)	254, 268, 854, 913, 1112, 1615
BssAI	RCCGGY	1 cut(s)	865
BssECI	CCNNGG	3 cut(s)	123, 1399, 1443
BssMI	GATC	4 cut(s)	78, 750, 1413, 1601
Bst2UI	CCWGG	2 cut(s)	167, 1401
Bst4CI	ACNGT	7 cut(s)	315, 429, 503, 621, 757, 1276, 1472
Bst6I	CTCTTC	1 cut(s)	1137
BstBI	TTCGAA	1 cut(s)	509
BstC8I	GCNNGC	2 cut(s)	446, 1498
BstDEI	CTNAG	8 cut(s)	290, 740, 842, 938, 1032, 1236, 1427, 1458
BstDSI	CCRYGG	1 cut(s)	123
BstF5I	GGATG	5 cut(s)	119, 1080, 1099, 1439, 1498
BstFNI	CGCG	1 cut(s)	125
BstKTI	GATC	4 cut(s)	81, 753, 1416, 1604
BstMAI	GTCTC	3 cut(s)	83, 515, 743
BstMBI	GATC	4 cut(s)	78, 750, 1413, 1601
BstMWI	GCNNNNNNNGC	3 cut(s)	482, 741, 1506
BstNI	CCWGG	2 cut(s)	167, 1401
BstPAI	GACNNNNGTC	1 cut(s)	1401
BstSCI	CCNGG	5 cut(s)	165, 801, 1399, 1442, 1443
BstSFI	CTRYAG	3 cut(s)	550, 1344, 1501
BstUI	CGCG	1 cut(s)	125
BstX2I	RGATCY	2 cut(s)	78, 1601
BstYI	RGATCY	2 cut(s)	78, 1601
BsuI	GTATCC	1 cut(s)	658
BsuRI	GGCC	2 cut(s)	422, 869
BtgI	CCRYGG	1 cut(s)	123
BtsCI	GGATG	5 cut(s)	119, 1080, 1099, 1439, 1498
BtsIMutI	CAGTG	5 cut(s)	261, 287, 634, 1119, 1455
BveI	ACCTGC	1 cut(s)	1163
Cac8I	GCNNGC	2 cut(s)	446, 1498
CaiI	CAGNNNCTG	2 cut(s)	142, 1400
Cfr10I	RCCGGY	1 cut(s)	865
Cfr13I	GGNCC	3 cut(s)	214, 868, 1532
Cfr42I	CCGCGG	1 cut(s)	126
Cfr9I	CCCGGG	1 cut(s)	1443
Csp6I	GTAC	4 cut(s)	130, 300, 889, 1180
CspCI	CAANNNNNGTGG	2 cut(s)	1030, 1065
CviAII	CATG	4 cut(s)	28, 358, 778, 1379
CviQI	GTAC	4 cut(s)	130, 300, 889, 1180
DdeI	CTNAG	8 cut(s)	290, 740, 842, 938, 1032, 1236, 1427, 1458
DpnI	GATC	4 cut(s)	80, 752, 1415, 1603
DpnII	GATC	4 cut(s)	78, 750, 1413, 1601
DraIII	CACNNNGTG	2 cut(s)	1411, 1461
Eam1104I	CTCTTC	1 cut(s)	1137
EarI	CTCTTC	1 cut(s)	1137
Ecl136II	GAGCTC	3 cut(s)	1240, 1509, 1543
Eco147I	AGGCCT	1 cut(s)	422
Eco24I	GRGCYC	3 cut(s)	1242, 1511, 1545
Eco31I	GGTCTC	1 cut(s)	83
Eco32I	GATATC	1 cut(s)	1314
Eco47I	GGWCC	2 cut(s)	214, 1532
Eco53kI	GAGCTC	3 cut(s)	1240, 1509, 1543
Eco57I	CTGAAG	4 cut(s)	370, 667, 1011, 1146
Eco88I	CYCGRG	2 cut(s)	1443, 1538
EcoICRI	GAGCTC	3 cut(s)	1240, 1509, 1543
EcoRI	GAATTC	2 cut(s)	1076, 1548
EcoRII	CCWGG	2 cut(s)	165, 1399
EcoRV	GATATC	1 cut(s)	1314
EcoT38I	GRGCYC	3 cut(s)	1242, 1511, 1545
FaeI	CATG	4 cut(s)	31, 361, 781, 1382
FaqI	GGGAC	3 cut(s)	159, 743, 1576
FatI	CATG	4 cut(s)	27, 357, 777, 1378
FblI	GTMKAC	1 cut(s)	1383
FokI	GGATG	5 cut(s)	106, 1067, 1106, 1426, 1505
FriOI	GRGCYC	3 cut(s)	1242, 1511, 1545
FspBI	CTAG	2 cut(s)	1193, 1698
GsuI	CTGGAG	2 cut(s)	188, 237
HaeIII	GGCC	2 cut(s)	422, 869
HapII	CCGG	4 cut(s)	748, 803, 866, 1444
Hin1II	CATG	4 cut(s)	31, 361, 781, 1382
HincII	GTYRAC	5 cut(s)	1015, 1279, 1522, 1612, 1645
HindII	GTYRAC	5 cut(s)	1015, 1279, 1522, 1612, 1645
HindIII	AAGCTT	1 cut(s)	1334
HinfI	GANTC	4 cut(s)	103, 147, 245, 815
HpaI	GTTAAC	2 cut(s)	1612, 1645
HpaII	CCGG	4 cut(s)	748, 803, 866, 1444
HphI	GGTGA	4 cut(s)	254, 1151, 1222, 1445
Hpy188I	TCNGA	5 cut(s)	228, 389, 686, 991, 1547
HpyAV	CCTTC	8 cut(s)	28, 79, 394, 412, 523, 691, 986, 1201
HpyCH4III	ACNGT	7 cut(s)	315, 429, 503, 621, 757, 1276, 1472
HpyF10VI	GCNNNNNNNGC	3 cut(s)	482, 741, 1506
HpyF3I	CTNAG	8 cut(s)	290, 740, 842, 938, 1032, 1236, 1427, 1458
Hsp92II	CATG	4 cut(s)	31, 361, 781, 1382
KspAI	GTTAAC	2 cut(s)	1612, 1645
KspI	CCGCGG	1 cut(s)	126
Kzo9I	GATC	4 cut(s)	78, 750, 1413, 1601
LmnI	GCTCC	5 cut(s)	919, 1059, 1506, 1548, 1689
LweI	GCATC	3 cut(s)	58, 1448, 1483
MaeI	CTAG	2 cut(s)	1193, 1698
MaeIII	GTNAC	4 cut(s)	196, 845, 1159, 1403
MalI	GATC	4 cut(s)	80, 752, 1415, 1603
MboI	GATC	4 cut(s)	78, 750, 1413, 1601
MboII	GAAGA	8 cut(s)	22, 112, 168, 1154, 1256, 1334, 1408, 1544
MflI	RGATCY	2 cut(s)	78, 1601
MhlI	GDGCHC	4 cut(s)	1056, 1242, 1511, 1545
MluCI	AATT	9 cut(s)	231, 785, 806, 1076, 1134, 1165, 1244, 1352, 1548
MlyI	GAGTC	1 cut(s)	141
MmeI	TCCRAC	1 cut(s)	977
MroXI	GAANNNNTTC	1 cut(s)	832
MseI	TTAA	2 cut(s)	1611, 1644
MspA1I	CMGCKG	3 cut(s)	125, 476, 953
MspI	CCGG	4 cut(s)	748, 803, 866, 1444
MspR9I	CCNGG	5 cut(s)	167, 803, 1401, 1444, 1445
MvaI	CCWGG	2 cut(s)	167, 1401
MvnI	CGCG	1 cut(s)	125
MwoI	GCNNNNNNNGC	3 cut(s)	482, 741, 1506
NciI	CCSGG	3 cut(s)	803, 1444, 1445
NdeII	GATC	4 cut(s)	78, 750, 1413, 1601
NlaIII	CATG	4 cut(s)	31, 361, 781, 1382
NlaIV	GGNNCC	4 cut(s)	80, 216, 1026, 1220
NmuCI	GTSAC	2 cut(s)	1159, 1403
NspV	TTCGAA	1 cut(s)	509
PaeR7I	CTCGAG	1 cut(s)	1538
PceI	AGGCCT	1 cut(s)	422
PdmI	GAANNNNTTC	1 cut(s)	832
PfeI	GAWTC	3 cut(s)	103, 245, 815
PflFI	GACNNNGTC	1 cut(s)	910
PleI	GAGTC	1 cut(s)	141
PpsI	GAGTC	1 cut(s)	141
PshAI	GACNNNNGTC	1 cut(s)	1401
PsiI	TTATAA	1 cut(s)	1710
Psp124BI	GAGCTC	3 cut(s)	1242, 1511, 1545
Psp6I	CCWGG	2 cut(s)	165, 1399
PspGI	CCWGG	2 cut(s)	165, 1399
PspN4I	GGNNCC	4 cut(s)	80, 216, 1026, 1220
PspPI	GGNCC	3 cut(s)	214, 868, 1532
PspXI	VCTCGAGB	1 cut(s)	1538
PstI	CTGCAG	2 cut(s)	554, 1348
PstNI	CAGNNNCTG	2 cut(s)	142, 1400
PsuI	RGATCY	2 cut(s)	78, 1601
PsyI	GACNNNGTC	1 cut(s)	910
PvuII	CAGCTG	1 cut(s)	476
RsaI	GTAC	4 cut(s)	131, 301, 890, 1181
RsaNI	GTAC	4 cut(s)	130, 300, 889, 1180
SacI	GAGCTC	3 cut(s)	1242, 1511, 1545
SacII	CCGCGG	1 cut(s)	126
SaqAI	TTAA	2 cut(s)	1611, 1644
Sau3AI	GATC	4 cut(s)	78, 750, 1413, 1601
Sau96I	GGNCC	3 cut(s)	214, 868, 1532
ScaI	AGTACT	1 cut(s)	131
SchI	GAGTC	1 cut(s)	141
ScrFI	CCNGG	5 cut(s)	167, 803, 1401, 1444, 1445
SduI	GDGCHC	4 cut(s)	1056, 1242, 1511, 1545
SfaNI	GCATC	3 cut(s)	58, 1448, 1483
SfcI	CTRYAG	3 cut(s)	550, 1344, 1501
Sfr274I	CTCGAG	1 cut(s)	1538
Sfr303I	CCGCGG	1 cut(s)	126
SfuI	TTCGAA	1 cut(s)	509
SgrBI	CCGCGG	1 cut(s)	126
SinI	GGWCC	2 cut(s)	214, 1532
SlaI	CTCGAG	1 cut(s)	1538
SmaI	CCCGGG	1 cut(s)	1445
SmlI	CTYRAG	6 cut(s)	95, 306, 578, 791, 1510, 1538
SmoI	CTYRAG	6 cut(s)	95, 306, 578, 791, 1510, 1538
SpeI	ACTAGT	1 cut(s)	1697
Sse9I	AATT	9 cut(s)	231, 785, 806, 1076, 1134, 1165, 1244, 1352, 1548
SseBI	AGGCCT	1 cut(s)	422
SsiI	CCGC	4 cut(s)	71, 123, 125, 953
SspI	AATATT	2 cut(s)	570, 1063
SspMI	CTAG	2 cut(s)	1193, 1698
SstI	GAGCTC	3 cut(s)	1242, 1511, 1545
StuI	AGGCCT	1 cut(s)	422
StyD4I	CCNGG	5 cut(s)	165, 801, 1399, 1442, 1443
TaaI	ACNGT	7 cut(s)	315, 429, 503, 621, 757, 1276, 1472
TaqI	TCGA	5 cut(s)	509, 727, 1229, 1365, 1539
TasI	AATT	9 cut(s)	231, 785, 806, 1076, 1134, 1165, 1244, 1352, 1548
TatI	WGTACW	2 cut(s)	129, 888
TfiI	GAWTC	3 cut(s)	103, 245, 815
Tru1I	TTAA	2 cut(s)	1611, 1644
Tru9I	TTAA	2 cut(s)	1611, 1644
TscAI	CASTG	5 cut(s)	268, 294, 634, 1119, 1462
TseFI	GTSAC	2 cut(s)	1159, 1403
Tsp45I	GTSAC	2 cut(s)	1159, 1403
TspDTI	ATGAA	6 cut(s)	354, 421, 542, 576, 648, 1069
TspGWI	ACGGA	3 cut(s)	221, 758, 1539
TspMI	CCCGGG	1 cut(s)	1443
TspRI	CASTG	5 cut(s)	268, 294, 634, 1119, 1462
Tth111I	GACNNNGTC	1 cut(s)	910
VpaK11BI	GGWCC	2 cut(s)	214, 1532
XapI	RAATTY	3 cut(s)	1076, 1244, 1548
XcmI	CCANNNNNNNNNTGG	2 cut(s)	461, 611
XhoI	CTCGAG	1 cut(s)	1538
XmaI	CCCGGG	1 cut(s)	1443
XmiI	GTMKAC	1 cut(s)	1383
XmnI	GAANNNNTTC	1 cut(s)	832
XspI	CTAG	2 cut(s)	1193, 1698
ZrmI	AGTACT	1 cut(s)	131

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.