RLG00000029814

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0021169
Physical Location & Seq
Reverse (-)
49613898 .. 49627323
13426 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029814

Sequence Viewer

Length: 2349 bp
ATGATCGATGGTGGTGTACCTAGGACTAGGTGGGTGGGGCTCTGTTCCCTTCTCCTTTCTGGTTGGCTTGTGGGTAGAAACGGCGATGTTTTTCTTCGACGTGTTTCCCTATTTCTTGGCTTCTGCCTTCTCTATGTCTTTGCCAGTGATCAGATTGCTGGGCGGGTAATGACTACGATGCCGTCTCCGGTTTGGAGACATGTTGATTGTAGCCTGATGGAACTGGACGATGTTGGTGTTGGTCTGGTTCATTCTGTCGGTGATGGTGGCAATAATGGCATTGGTAGCTCTGTTATGAGGTATGAATCTAAGTTCATCAACGACATAGTGGAGCAGATCTCAGTCCAAGTACTAAATAGCACATGCTTGAATGTGGCTAAACACCCTGTTGGAATACAATCTTGCGTGGAAGAAGTGCACTGGTATTTAGGTCTTGGTGAAGGTGGCTGTCGCATGACAACGATTGCCAAAGCTGTTTACAATTCAATTGCCCATATCTTTGAAGGTAGTTGTTTTCTAGCGGATGTTAGAGAACGTTCAATGCCACATGGAGGCTTGCTGCAACTACAAGAGTCTCTTCTTAAAGCGACTTTAGGAGGAAAAAATGTGAATTTGGTCAGTGTCGATGGAGGAATCAATGTCATAAAGCATCGTCTGGGATTCAGGAAGGTTCTCTTAATTCTTGATTATGTGAATCAACAGGACCAATTAAACAAGTTAGCTGGAGCACCAAGTTGGTTTGGTGAGGCCAGTAGATTAATCTATGAGGTCAAGAAATTGGATTACCAAAAGGCTCTTGAGCTTTTTAGTTGGAGTTCTCATCTTCGAAATGATAGCATGGACCGTTGGCCATCTACATTAGATTGTTATGAAGGAGATCCTTATGAAAGTATTCAAAAGATGCTCAAAATAAGCTATGATGCATTGGCATACCGCGTGCAACAAGGTGGAAACACGAGCTATGTGATACAAATACTACAAGATGGTAACCTCAAGAGGCCTGAGGATTGCATTCATGAACTCGTACAAAAAGCCATCATAACTATTGAAAACAATACCATTCGGATGCATGACTTATTAGAACAAATGGGTAAGGATATTGTTCATCAAGAATCTCCTATAGATCCTGGGAGACGTAGCCGATTGTGGTTTCACGACGATGTCAACCGGGTTTTAACAGAAAACATGTTATATGGTTGTGAAGTCCTAACAAAGATACCTGACTTGTCTGGAAGCCCAAACCTCAAGCACCTGGACCTAGGGCAATGTAAGAGTTTAGTTAAGGTTGATCCTTCTATTGGATGGCTTGACAAACTTGTTACCTTGGATCTTCAAGGGTGCTCTAATCTTGAAATATTTCCAACAAGAATCTGCTTGAAATCTCTGACAACATTTTGTCTCAAAGATTGCAAAAAGCTTGAGAGATTCCCAGACATAATGGGAAAGATGGAATTGATGAGAACATTGCAAAAGCTCCGAGATATTCCAGAACTTCCACCAAATGTAGAAGTTGTAAACGTGTATGACTACACAGCACTAAAAAGTTTTCTGGATGTGTCAATTATATTGGAACAAAATGTCTTCCGGGGCTCAAGGGAGCTGCAGCTGACGAATTGCCGAACACTACGTGGGAATCATGGCTTTGACGAGGCAAAGATGGAAAGCTTTTTAATGAATCAGCTGGTTATTTGTTTTCGTGATAAGGACTTTGAAATTGTACTTCCAGGCAATCAAGTTCCAAAGTGGTTCAAGTATCGTGAAAATCCAAATTACATATATATACCTTCAACTTCAGACGAAGATGTTCAGAAGTTTGATATATGTGAAGTTTGTATTGGAGTTCCTCCAAATTCAGTGAAGCTTGGATTGGCTCTCTGTGCTGTTTTTGAAGTTACCCAAAATAATGGTGATCGTTTTTCTATAGATGTCGATTTTATGCATAATGGGAGATTCATCGGTTATAGGACATGTATTGACATGACTAATATAGACACAGAGTCGACCCATGTGTCCCTGAATTATTTCCTTATGTCCTTAAATGGAGCAGAGAGCAGTGATACATGTCAATTGATATTTTATCACAGTAATGGTGATGCCAGACTATCGTTTAAAAGCTGTGGATTTCACATTGTCGATAATTGTGGTGTTATGACTTCCGATGATGTTAATTTAGATCAACAAAAGCAAGAGAAGTGGCTTTCTTCATCGCTAGCGAAGAGACCTCACGAAGTAGCAGGGGAAGATCATCAAGATCAGCAGCATTGGTGTTGTACGTCTTCGACTTCATCAGAACCAATTGCAAGTAAGCGAAACCGTGTCAAGGAGGAGCAAACTCATCACTTCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC TIR

Protein Analysis

783

Amino Acids

88.4

Weight (kDa)

5.78

Isoelectric Point (pI)

39.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_ROQ1 PF23282 320 - 372 9.5e-07 Disease resistance protein Roq1-like, winged-helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0021169)

Species Orthologous Gene IDs
malus_domestica MD02G1113200.v1.1
rosa_laevigata RLG00000029814
rosa_roxburghii Rroxscaffold_4G00319990 Rroxscaffold_4G00320110
rosa_samantha Rh1BG084700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2008
AccI GTMKAC 1 cut(s) 2000
AccII CGCG 1 cut(s) 936
AciI CCGC 3 cut(s) 163, 521, 934
AclI AACGTT 1 cut(s) 535
AclWI GGATC 4 cut(s) 872, 1118, 1283, 1335
AcoI YGGCCR 1 cut(s) 848
AcsI RAATTY 2 cut(s) 610, 1849
AcuI CTGAAG 1 cut(s) 1776
AdeI CACNNNGTG 1 cut(s) 1628
AfaI GTAC 5 cut(s) 18, 351, 1026, 1719, 2272
AfiI CCNNNNNNNGG 3 cut(s) 551, 1298, 2320
AflIII ACRYGT 6 cut(s) 100, 199, 1185, 1518, 1967, 2060
AhdI GACNNNNNGTC 1 cut(s) 1996
AjiI CACGTC 1 cut(s) 101
AjnI CCWGG 3 cut(s) 1126, 1251, 1723
AjuI GAANNNNNNNTTGG 4 cut(s) 1818, 1850, 1850, 1882
Alw21I GWGCWC 3 cut(s) 420, 730, 1343
Alw26I GTCTC 6 cut(s) 189, 190, 579, 1126, 1403, 2212
Alw44I GTGCAC 1 cut(s) 416
AlwI GGATC 4 cut(s) 872, 1118, 1283, 1335
AoxI GGCC 3 cut(s) 747, 848, 998
ApaLI GTGCAC 1 cut(s) 416
ApeKI GCWGC 4 cut(s) 559, 1600, 1603, 2257
ApoI RAATTY 2 cut(s) 610, 1849
AseI ATTAAT 1 cut(s) 758
Asp700I GAANNNNTTC 4 cut(s) 891, 1356, 1803, 2021
AspA2I CCTAGG 2 cut(s) 20, 1258
AspS9I GGNCC 3 cut(s) 703, 841, 1255
AsuC2I CCSGG 2 cut(s) 1169, 1586
AsuHPI GGTGA 5 cut(s) 272, 449, 755, 1919, 2102
AsuII TTCGAA 1 cut(s) 826
AsuNHI GCTAGC 1 cut(s) 2209
AvaII GGWCC 3 cut(s) 703, 841, 1255
AvrII CCTAGG 2 cut(s) 20, 1258
AxyI CCTNAGG 1 cut(s) 1002
BaeGI GKGCMC 1 cut(s) 420
BalI TGGCCA 1 cut(s) 850
BanII GRGCYC 2 cut(s) 42, 1592
BauI CACGAG 1 cut(s) 955
BbsI GAAGAC 2 cut(s) 1573, 2268
Bbv12I GWGCWC 3 cut(s) 420, 730, 1343
BbvI GCAGC 4 cut(s) 546, 1587, 1615, 2269
BceAI ACGGC 2 cut(s) 97, 166
BciT130I CCWGG 3 cut(s) 1128, 1253, 1725
BclI TGATCA 1 cut(s) 148
BcnI CCSGG 2 cut(s) 1169, 1586
BcoDI GTCTC 6 cut(s) 189, 190, 579, 1126, 1403, 2212
BfaI CTAG 5 cut(s) 21, 27, 518, 1259, 2210
BfmI CTRYAG 3 cut(s) 1119, 1601, 1920
BglII AGATCT 1 cut(s) 336
BisI GCNGC 4 cut(s) 560, 1601, 1604, 2258
BlnI CCTAGG 2 cut(s) 20, 1258
BlsI GCNGC 4 cut(s) 561, 1602, 1605, 2259
BmcAI AGTACT 1 cut(s) 351
Bme1390I CCNGG 5 cut(s) 1128, 1169, 1253, 1586, 1725
Bme18I GGWCC 3 cut(s) 703, 841, 1255
BmeRI GACNNNNNGTC 1 cut(s) 1996
BmgBI CACGTC 1 cut(s) 101
BmgT120I GGNCC 3 cut(s) 703, 841, 1255
BmrFI CCNGG 5 cut(s) 1128, 1169, 1253, 1586, 1725
BmsI GCATC 6 cut(s) 168, 658, 891, 910, 1056, 2083
BmtI GCTAGC 1 cut(s) 2213
BpiI GAAGAC 2 cut(s) 1573, 2268
BplI GAGNNNNNCTC 2 cut(s) 323, 355
BpmI CTGGAG 1 cut(s) 744
Bpu14I TTCGAA 1 cut(s) 826
BpuEI CTTGAG 5 cut(s) 818, 977, 1229, 1439, 1576
BpuMI CCSGG 2 cut(s) 1169, 1586
Bsa29I ATCGAT 1 cut(s) 6
BsaAI YACGTR 1 cut(s) 1628
BsaI GGTCTC 1 cut(s) 2212
BsaJI CCNNGG 5 cut(s) 20, 1127, 1258, 1323, 1585
BsaWI WCCGGW 1 cut(s) 187
Bsc4I CCNNNNNNNGG 3 cut(s) 551, 1298, 2320
Bse1I ACTGG 4 cut(s) 144, 228, 425, 750
Bse21I CCTNAGG 1 cut(s) 1002
Bse3DI GCAATG 2 cut(s) 1271, 1463
BseBI CCWGG 3 cut(s) 1128, 1253, 1725
BseCI ATCGAT 1 cut(s) 6
BseDI CCNNGG 5 cut(s) 20, 1127, 1258, 1323, 1585
BseGI GGATG 4 cut(s) 529, 1071, 1307, 1558
BseLI CCNNNNNNNGG 3 cut(s) 551, 1298, 2320
BseMI GCAATG 2 cut(s) 1271, 1463
BseMII CTCAG 2 cut(s) 354, 993
BseNI ACTGG 4 cut(s) 144, 228, 425, 750
BseRI GAGGAG 1 cut(s) 2339
BseSI GKGCMC 1 cut(s) 420
BseXI GCAGC 4 cut(s) 546, 1587, 1615, 2269
BseYI CCCAGC 1 cut(s) 158
Bsh1236I CGCG 1 cut(s) 936
BshFI GGCC 3 cut(s) 749, 850, 1000
BshVI ATCGAT 1 cut(s) 6
BsiHKAI GWGCWC 3 cut(s) 420, 730, 1343
BsiSI CCGG 3 cut(s) 188, 1168, 1585
BslFI GGGAC 1 cut(s) 1996
BslI CCNNNNNNNGG 3 cut(s) 551, 1298, 2320
BsmAI GTCTC 6 cut(s) 189, 190, 579, 1126, 1403, 2212
BsmBI CGTCTC 2 cut(s) 189, 1126
BsmFI GGGAC 1 cut(s) 1996
BsmI GAATGC 1 cut(s) 1011
BsnI GGCC 3 cut(s) 749, 850, 1000
Bso31I GGTCTC 1 cut(s) 2212
Bsp119I TTCGAA 1 cut(s) 826
Bsp1286I GDGCHC 5 cut(s) 42, 420, 730, 1343, 1592
BspACI CCGC 3 cut(s) 163, 521, 934
BspANI GGCC 3 cut(s) 749, 850, 1000
BspCNI CTCAG 2 cut(s) 353, 994
BspDI ATCGAT 1 cut(s) 6
BspFNI CGCG 1 cut(s) 936
BspHI TCATGA 1 cut(s) 1015
BspMAI CTGCAG 1 cut(s) 1605
BspOI GCTAGC 1 cut(s) 2213
BspPI GGATC 4 cut(s) 872, 1118, 1283, 1335
BspT104I TTCGAA 1 cut(s) 826
BspTNI GGTCTC 1 cut(s) 2212
BsrDI GCAATG 2 cut(s) 1271, 1463
BsrI ACTGG 4 cut(s) 144, 228, 425, 750
BssECI CCNNGG 5 cut(s) 20, 1127, 1258, 1323, 1585
BssSI CACGAG 1 cut(s) 955
BssT1I CCWWGG 3 cut(s) 20, 1258, 1323
Bst2BI CACGAG 1 cut(s) 955
Bst2UI CCWGG 3 cut(s) 1128, 1253, 1725
Bst4CI ACNGT 3 cut(s) 845, 2084, 2315
Bst6I CTCTTC 2 cut(s) 582, 2210
BstBAI YACGTR 1 cut(s) 1628
BstBI TTCGAA 1 cut(s) 826
BstC8I GCNNGC 3 cut(s) 557, 938, 2211
BstDEI CTNAG 3 cut(s) 309, 340, 1002
BstEII GGTNACC 1 cut(s) 986
BstF5I GGATG 4 cut(s) 529, 1071, 1307, 1558
BstFNI CGCG 1 cut(s) 936
BstMAI GTCTC 6 cut(s) 189, 190, 579, 1126, 1403, 2212
BstMWI GCNNNNNNNGC 3 cut(s) 276, 285, 1877
BstNI CCWGG 3 cut(s) 1128, 1253, 1725
BstNSI RCATGY 5 cut(s) 203, 366, 1189, 1971, 2064
BstPI GGTNACC 1 cut(s) 986
BstSCI CCNGG 5 cut(s) 1126, 1167, 1251, 1584, 1723
BstSFI CTRYAG 3 cut(s) 1119, 1601, 1920
BstSLI GKGCMC 1 cut(s) 420
BstUI CGCG 1 cut(s) 936
BstV1I GCAGC 4 cut(s) 546, 1587, 1615, 2269
BstV2I GAAGAC 2 cut(s) 1573, 2268
BstX2I RGATCY 4 cut(s) 336, 877, 1123, 1327
BstXI CCANNNNNNTGG 1 cut(s) 1904
BstYI RGATCY 4 cut(s) 336, 877, 1123, 1327
Bsu15I ATCGAT 1 cut(s) 6
Bsu36I CCTNAGG 1 cut(s) 1002
BsuRI GGCC 3 cut(s) 749, 850, 1000
BsuTUI ATCGAT 1 cut(s) 6
BtgZI GCGATG 2 cut(s) 99, 2190
BtrI CACGTC 1 cut(s) 101
BtsCI GGATG 4 cut(s) 529, 1071, 1307, 1558
BtsI GCAGTG 1 cut(s) 2059
BtsIMutI CAGTG 5 cut(s) 151, 418, 625, 1860, 2059
Cac8I GCNNGC 3 cut(s) 557, 938, 2211
CciI TCATGA 1 cut(s) 1015
Cfr13I GGNCC 3 cut(s) 703, 841, 1255
ClaI ATCGAT 1 cut(s) 6
Csp6I GTAC 5 cut(s) 17, 350, 1025, 1718, 2271
CspCI CAANNNNNGTGG 2 cut(s) 2174, 2209
CviQI GTAC 5 cut(s) 17, 350, 1025, 1718, 2271
DdeI CTNAG 3 cut(s) 309, 340, 1002
DraI TTTAAA 1 cut(s) 2110
DraIII CACNNNGTG 1 cut(s) 1628
DrdI GACNNNNNNGTC 1 cut(s) 2008
DriI GACNNNNNGTC 1 cut(s) 1996
DseDI GACNNNNNNGTC 1 cut(s) 2008
EaeI YGGCCR 1 cut(s) 848
Eam1104I CTCTTC 2 cut(s) 582, 2210
Eam1105I GACNNNNNGTC 1 cut(s) 1996
EarI CTCTTC 2 cut(s) 582, 2210
Eco130I CCWWGG 3 cut(s) 20, 1258, 1323
Eco147I AGGCCT 1 cut(s) 1000
Eco24I GRGCYC 2 cut(s) 42, 1592
Eco31I GGTCTC 1 cut(s) 2212
Eco47I GGWCC 3 cut(s) 703, 841, 1255
Eco57I CTGAAG 1 cut(s) 1776
Eco81I CCTNAGG 1 cut(s) 1002
Eco91I GGTNACC 1 cut(s) 986
EcoO65I GGTNACC 1 cut(s) 986
EcoRII CCWGG 3 cut(s) 1126, 1251, 1723
EcoT14I CCWWGG 3 cut(s) 20, 1258, 1323
EcoT22I ATGCAT 3 cut(s) 925, 1071, 1941
EcoT38I GRGCYC 2 cut(s) 42, 1592
ErhI CCWWGG 3 cut(s) 20, 1258, 1323
Esp3I CGTCTC 2 cut(s) 189, 1126
FalI AAGNNNNNCTT 4 cut(s) 561, 593, 659, 691
FaqI GGGAC 1 cut(s) 1996
FauI CCCGC 1 cut(s) 156
FbaI TGATCA 1 cut(s) 148
FblI GTMKAC 1 cut(s) 2000
Fnu4HI GCNGC 4 cut(s) 560, 1601, 1604, 2258
FokI GGATG 4 cut(s) 536, 1078, 1314, 1565
FriOI GRGCYC 2 cut(s) 42, 1592
Fsp4HI GCNGC 4 cut(s) 560, 1601, 1604, 2258
FspBI CTAG 5 cut(s) 21, 27, 518, 1259, 2210
GluI GCNGC 4 cut(s) 560, 1601, 1604, 2258
GsaI CCCAGC 1 cut(s) 162
GsuI CTGGAG 1 cut(s) 744
HaeIII GGCC 3 cut(s) 749, 850, 1000
HapII CCGG 3 cut(s) 188, 1168, 1585
HincII GTYRAC 2 cut(s) 1165, 2001
HindII GTYRAC 2 cut(s) 1165, 2001
HindIII AAGCTT 3 cut(s) 1415, 1663, 1859
HpaII CCGG 3 cut(s) 188, 1168, 1585
HphI GGTGA 5 cut(s) 272, 449, 755, 1919, 2102
Hpy166II GTNNAC 6 cut(s) 17, 418, 478, 1165, 1516, 2001
Hpy188I TCNGA 8 cut(s) 153, 1065, 1386, 1478, 1795, 1809, 2158, 2290
Hpy8I GTNNAC 6 cut(s) 17, 418, 478, 1165, 1516, 2001
Hpy99I CGWCG 2 cut(s) 102, 1160
HpyAV CCTTC 8 cut(s) 59, 137, 434, 497, 661, 866, 1302, 1794
HpyCH4III ACNGT 3 cut(s) 845, 2084, 2315
HpyCH4IV ACGT 6 cut(s) 100, 535, 1135, 1518, 1627, 2273
HpyF10VI GCNNNNNNNGC 3 cut(s) 276, 285, 1877
HpyF3I CTNAG 3 cut(s) 309, 340, 1002
HpySE526I ACGT 6 cut(s) 100, 535, 1135, 1518, 1627, 2273
Ksp22I TGATCA 1 cut(s) 148
LmnI GCTCC 6 cut(s) 331, 725, 1479, 1597, 2042, 2326
Lsp1109I GCAGC 4 cut(s) 546, 1587, 1615, 2269
LweI GCATC 6 cut(s) 168, 658, 891, 910, 1056, 2083
MaeI CTAG 5 cut(s) 21, 27, 518, 1259, 2210
MaeII ACGT 6 cut(s) 100, 535, 1135, 1518, 1627, 2273
MaeIII GTNAC 3 cut(s) 986, 1318, 1891
MfeI CAATTG 3 cut(s) 486, 2066, 2295
MflI RGATCY 4 cut(s) 336, 877, 1123, 1327
MhlI GDGCHC 5 cut(s) 42, 420, 730, 1343, 1592
MlsI TGGCCA 1 cut(s) 850
MluNI TGGCCA 1 cut(s) 850
MlyI GAGTC 2 cut(s) 581, 2006
MmeI TCCRAC 3 cut(s) 370, 791, 1385
Mox20I TGGCCA 1 cut(s) 850
Mph1103I ATGCAT 3 cut(s) 925, 1071, 1941
MroXI GAANNNNTTC 4 cut(s) 891, 1356, 1803, 2021
MscI TGGCCA 1 cut(s) 850
MslI CAYNNNNRTG 3 cut(s) 1064, 1158, 2085
Msp20I TGGCCA 1 cut(s) 850
MspA1I CMGCKG 2 cut(s) 1606, 1681
MspI CCGG 3 cut(s) 188, 1168, 1585
MspR9I CCNGG 5 cut(s) 1128, 1169, 1253, 1586, 1725
MunI CAATTG 3 cut(s) 486, 2066, 2295
Mva1269I GAATGC 1 cut(s) 1011
MvaI CCWGG 3 cut(s) 1128, 1253, 1725
MvnI CGCG 1 cut(s) 936
MwoI GCNNNNNNNGC 3 cut(s) 276, 285, 1877
NciI CCSGG 2 cut(s) 1169, 1586
NheI GCTAGC 1 cut(s) 2209
NsiI ATGCAT 3 cut(s) 925, 1071, 1941
NspI RCATGY 5 cut(s) 203, 366, 1189, 1971, 2064
NspV TTCGAA 1 cut(s) 826
PagI TCATGA 1 cut(s) 1015
PceI AGGCCT 1 cut(s) 1000
PciI ACATGT 4 cut(s) 199, 1185, 1967, 2060
PctI GAATGC 1 cut(s) 1011
PdmI GAANNNNTTC 4 cut(s) 891, 1356, 1803, 2021
PflFI GACNNNGTC 1 cut(s) 1160
PkrI GCNGC 4 cut(s) 561, 1602, 1605, 2259
PleI GAGTC 2 cut(s) 580, 2005
PpsI GAGTC 2 cut(s) 580, 2005
Ppu21I YACGTR 1 cut(s) 1628
PscI ACATGT 4 cut(s) 199, 1185, 1967, 2060
PshBI ATTAAT 1 cut(s) 758
Psp1406I AACGTT 1 cut(s) 535
Psp6I CCWGG 3 cut(s) 1126, 1251, 1723
PspEI GGTNACC 1 cut(s) 986
PspFI CCCAGC 1 cut(s) 158
PspGI CCWGG 3 cut(s) 1126, 1251, 1723
PspPI GGNCC 3 cut(s) 703, 841, 1255
PstI CTGCAG 1 cut(s) 1605
PsuI RGATCY 4 cut(s) 336, 877, 1123, 1327
PsyI GACNNNGTC 1 cut(s) 1160
PvuII CAGCTG 2 cut(s) 1606, 1681
RsaI GTAC 5 cut(s) 18, 351, 1026, 1719, 2272
RsaNI GTAC 5 cut(s) 17, 350, 1025, 1718, 2271
RseI CAYNNNNRTG 3 cut(s) 1064, 1158, 2085
SalI GTCGAC 1 cut(s) 1999
SatI GCNGC 4 cut(s) 560, 1601, 1604, 2258
Sau96I GGNCC 3 cut(s) 703, 841, 1255
ScaI AGTACT 1 cut(s) 351
SchI GAGTC 2 cut(s) 581, 2006
ScrFI CCNGG 5 cut(s) 1128, 1169, 1253, 1586, 1725
SduI GDGCHC 5 cut(s) 42, 420, 730, 1343, 1592
SfaNI GCATC 6 cut(s) 168, 658, 891, 910, 1056, 2083
SfcI CTRYAG 3 cut(s) 1119, 1601, 1920
SfuI TTCGAA 1 cut(s) 826
SinI GGWCC 3 cut(s) 703, 841, 1255
SmiMI CAYNNNNRTG 3 cut(s) 1064, 1158, 2085
SmlI CTYRAG 5 cut(s) 797, 992, 1244, 1418, 1591
SmoI CTYRAG 5 cut(s) 797, 992, 1244, 1418, 1591
SseBI AGGCCT 1 cut(s) 1000
SsiI CCGC 3 cut(s) 163, 521, 934
SspI AATATT 1 cut(s) 1356
SspMI CTAG 5 cut(s) 21, 27, 518, 1259, 2210
StuI AGGCCT 1 cut(s) 1000
StyD4I CCNGG 5 cut(s) 1126, 1167, 1251, 1584, 1723
StyI CCWWGG 3 cut(s) 20, 1258, 1323
TaaI ACNGT 3 cut(s) 845, 2084, 2315
TaiI ACGT 6 cut(s) 103, 538, 1138, 1521, 1630, 2276
TaqI TCGA 8 cut(s) 6, 97, 624, 826, 1929, 2000, 2133, 2279
TatI WGTACW 2 cut(s) 349, 1717
TscAI CASTG 5 cut(s) 151, 425, 625, 1860, 2059
TseI GCWGC 4 cut(s) 559, 1600, 1603, 2257
TspRI CASTG 5 cut(s) 151, 425, 625, 1860, 2059
Tth111I GACNNNGTC 1 cut(s) 1160
VneI GTGCAC 1 cut(s) 416
VpaK11BI GGWCC 3 cut(s) 703, 841, 1255
VspI ATTAAT 1 cut(s) 758
XapI RAATTY 2 cut(s) 610, 1849
XceI RCATGY 5 cut(s) 203, 366, 1189, 1971, 2064
XmaJI CCTAGG 2 cut(s) 20, 1258
XmiI GTMKAC 1 cut(s) 2000
XmnI GAANNNNTTC 4 cut(s) 891, 1356, 1803, 2021
XspI CTAG 5 cut(s) 21, 27, 518, 1259, 2210
ZrmI AGTACT 1 cut(s) 351
Zsp2I ATGCAT 3 cut(s) 925, 1071, 1941
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.