Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0016088

Physical Location & Seq

Genomic Coordinates Forward (+)

7830525 .. 7833247

Gene Structure 2723 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000031727

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1788 bp

ATGAAAGTTAGAAGACTAGCCACAATCAGACCGTCCACGTTGTTATCTTCCCAAAACCACAAACCTCCTCTCCCACCAAATCAAGTTTTCCCGCCAACACAATCCCCTGCCCCTCACCCAGACACCGCTCTATCCTCTGCTCTGCAGAGTTACATCAACTCAGACAACCCTTCCCCTGGCCAAAAGATCCATGCCCATATTCTCAAATCCGGGTTCCGACCCAATAACAATGTCTCCATCAAGCTCCTCATACTCTACCTGAAATGTGGTTCGTTGAAATATGCACGCCAGATGTTCGATGAATTGCCTGCAAGAACCCTTTCCTCTTATAATTACTTGATCAGTGGAAATCTCAAACATGGGGAAGTAGAGGAGTCTATCAATTTGGTTAGAAGGCTTGTTTTATGTGGGGAAAGGCCTGATGGGTACACGTTTTCAATGATTTTGAAAGCGTCTACTTGTAATGGTAATGTGCCGTTGCCGTCTAGCCTGGGGAGAATCGTGCATGCCCAGATAATTAAGTCGGATGTTGAGGCTGATGATGTGCTTTATACGGCGCTTGTTGCGTCTTATGTTAGGAATGGGAGACTCGGCTATGCGAGGAGTGTGTTTGATATGATGTTGGAGAAGAATATAGTGTGTTCAACGTCGATGATATCCGGGTACATGAGTCAAGGATCTGTGGAAGATGCTGAAGATATATTCCGGAGAACGGTTGAGAAAGATGTTGTGGTGTTTAATGCGATGATTGAAGGTTACAGCAAATCGGTTGGATCTGCTAAGAAATCGCTTGAGGTTTACATTGACATGCAGCGGTTGAATTTCCAACCTAACATCTCTACATTTGCTAGTCTCATCGGGGCGTGCTCGGCTCTGGCTGCATTTGAAATTGGTCAACAAGTCCAGTGTCAGCTAATGAAAACTAACTTATTCGTGGACATAAAGATGGGAAGTGCTCTTCTAGACATGTACTCGAAATGTGGAAGAGTTGAGGAGGCACGGAGAATTTTTGACCACATGCCTCAAAGAAATGTATTTTCATGGACTTCAATGATCGATGGTTATGGGAAGAATGGATATCCTGATGAAGCGCTTGAGCTCTTCAGTATAATGCAGAAAGAACACCAAATCAAACCCAATTTTGTCACATTCCTCAGTGCGCTCTCAGCTTGCGGACATGCTGGGCTTGTTGATAAGGGCCTTGGCATCTTTGAAAGTATGAAGAGGGACTACTCAATAAAACCAACAATGGAGCATTATGCTTGTATGGTTGATCTCTTGGGACGTGCTGGACGTTTGCATCAAGCATGGGAGTTTGCAAAGGGGATGCCTGATAAGCCCAATTCTGGCGTTTGGGCAGCGCTTCTTAATTCAAGTACAGTACATGGTGATATTGAGATGGCAAGGATAGCATCCGATGAACTTTTTAAGCTGAATCCCGACAGTCGGCCAGGGGCATATATTTCATTTTCTAATAATTTGGCAGCTGCTGGGAAATGGGACAGTAACCAGAAACCAAAGAAGAATCAAACTTCGCAACAAGAAGAAGCTATGAGCTGCTGTTGCGGTGAGGATTGCCGGCCTTTGGGGTTTCTACTTGGCCTGCCCTTTGCTTTCGTCTCACTCCTCCTCTCCGTTATTGGCGTGTTCATCTGGATTGTCGGGTTGGCGTTAACTTGTATATGCCCATGCTGCTTGTGTGCGACGATCATAGTTGAGCTTGCTTTGTCGTTGATCAAGGCTCCATTTTCGATCATGAAGTGGTTCACATCCAAGATTCCTTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

596

Amino Acids

65.72

Weight (kDa)

8.49

Isoelectric Point (pI)

39.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	241 - 289	4.3e-09	PPR repeat family
PPR_2	PF13041	343 - 391	1.7e-10	PPR repeat family
PPR_1	PF12854	343 - 371	2.9e-06	PPR repeat
PPR	PF01535	346 - 374	2.1e-09	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016088)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28690
fragaria_vesca	FvH4_5g29510
malus_domestica	MD10G1283700.v1.1
prunus_persica	Prupe.4G058100_v2.0.a1
pyrus_communis	pycom05g28160 pycom10g23660
rosa_chinensis	RchiOBHm_Chr5g0010161
rosa_laevigata	RLG00000031727
rosa_roxburghii	Rroxscaffold_1G00066030
rosa_rugosa	Rorug04G0449500
rosa_samantha	Rh5AG080400 Rh5BG074900 Rh5CG088700 Rh5DG075900
rosa_wichuraiana	Rw5G007440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	330
AccBSI	CCGCTC	1 cut(s)	128
AccI	GTMKAC	1 cut(s)	455
AccIII	TCCGGA	1 cut(s)	705
AciI	CCGC	5 cut(s)	92, 126, 814, 1173, 1566
AclWI	GGATC	3 cut(s)	181, 685, 781
AcoI	YGGCCR	2 cut(s)	178, 1448
AcsI	RAATTY	2 cut(s)	820, 1005
AcuI	CTGAAG	2 cut(s)	714, 1087
AfaI	GTAC	5 cut(s)	428, 665, 971, 1378, 1383
AfeI	AGCGCT	2 cut(s)	1092, 1362
AfiI	CCNNNNNNNGG	5 cut(s)	176, 712, 1346, 1446, 1585
AflIII	ACRYGT	2 cut(s)	429, 966
AjiI	CACGTC	1 cut(s)	1286
AjnI	CCWGG	3 cut(s)	175, 489, 1450
AluBI	AGCT	9 cut(s)	244, 913, 1099, 1169, 1432, 1487, 1550, 1557, 1720
AluI	AGCT	9 cut(s)	244, 913, 1099, 1169, 1432, 1487, 1550, 1557, 1720
Alw21I	GWGCWC	3 cut(s)	869, 958, 1101
Alw26I	GTCTC	4 cut(s)	238, 580, 857, 1624
AlwI	GGATC	3 cut(s)	181, 685, 781
AlwNI	CAGNNNCTG	1 cut(s)	1490
Aor13HI	TCCGGA	1 cut(s)	705
Aor51HI	AGCGCT	2 cut(s)	1092, 1362
AoxI	GGCC	6 cut(s)	178, 416, 1198, 1448, 1580, 1600
ApeKI	GCWGC	7 cut(s)	811, 878, 1358, 1484, 1487, 1557, 1692
ApoI	RAATTY	2 cut(s)	820, 1005
Asp700I	GAANNNNTTC	2 cut(s)	319, 1763
AspLEI	GCGC	4 cut(s)	559, 1093, 1162, 1363
AspS9I	GGNCC	1 cut(s)	1198
AsuC2I	CCSGG	2 cut(s)	211, 661
AsuHPI	GGTGA	3 cut(s)	107, 1400, 1580
BaeI	ACNNNNGTAYC	2 cut(s)	655, 688
BalI	TGGCCA	1 cut(s)	180
BanII	GRGCYC	1 cut(s)	1101
BarI	GAAGNNNNNNTAC	2 cut(s)	1214, 1246
BbsI	GAAGAC	1 cut(s)	19
Bbv12I	GWGCWC	3 cut(s)	869, 958, 1101
BbvI	GCAGC	7 cut(s)	823, 865, 1370, 1474, 1496, 1544, 1679
BccI	CCATC	5 cut(s)	245, 416, 940, 1052, 1393
BceAI	ACGGC	3 cut(s)	460, 466, 570
BciT130I	CCWGG	3 cut(s)	177, 491, 1452
BclI	TGATCA	2 cut(s)	339, 1734
BcnI	CCSGG	2 cut(s)	211, 661
BcoDI	GTCTC	4 cut(s)	238, 580, 857, 1624
BfaI	CTAG	4 cut(s)	17, 486, 849, 962
BfmI	CTRYAG	1 cut(s)	143
BfoI	RGCGCY	3 cut(s)	560, 1094, 1364
BisI	GCNGC	7 cut(s)	812, 879, 1359, 1485, 1488, 1558, 1693
BlsI	GCNGC	7 cut(s)	813, 880, 1360, 1486, 1489, 1559, 1694
Bme1390I	CCNGG	5 cut(s)	177, 211, 491, 661, 1452
BmgBI	CACGTC	1 cut(s)	1286
BmgT120I	GGNCC	1 cut(s)	1198
BmiI	GGNNCC	2 cut(s)	215, 1743
BmrFI	CCNGG	5 cut(s)	177, 211, 491, 661, 1452
BmsI	GCATC	5 cut(s)	679, 1215, 1309, 1317, 1421
BpiI	GAAGAC	1 cut(s)	19
BpuEI	CTTGAG	2 cut(s)	812, 1115
BpuMI	CCSGG	2 cut(s)	211, 661
Bsa29I	ATCGAT	1 cut(s)	1056
BsaJI	CCNNGG	4 cut(s)	175, 490, 1201, 1451
BsaWI	WCCGGW	1 cut(s)	705
BsaXI	ACNNNNNCTCC	4 cut(s)	54, 84, 218, 248
Bsc4I	CCNNNNNNNGG	5 cut(s)	176, 712, 1346, 1446, 1585
Bse118I	RCCGGY	1 cut(s)	1578
Bse1I	ACTGG	1 cut(s)	904
BseAI	TCCGGA	1 cut(s)	705
BseBI	CCWGG	3 cut(s)	177, 491, 1452
BseCI	ATCGAT	1 cut(s)	1056
BseDI	CCNNGG	4 cut(s)	175, 490, 1201, 1451
BseGI	GGATG	4 cut(s)	532, 1332, 1412, 1769
BseLI	CCNNNNNNNGG	5 cut(s)	176, 712, 1346, 1446, 1585
BseMII	CTCAG	3 cut(s)	174, 1168, 1179
BseNI	ACTGG	1 cut(s)	904
BseRI	GAGGAG	7 cut(s)	57, 236, 386, 616, 1007, 1616, 1619
BseXI	GCAGC	7 cut(s)	823, 865, 1370, 1474, 1496, 1544, 1679
BseYI	CCCAGC	2 cut(s)	1181, 1490
BshFI	GGCC	6 cut(s)	180, 418, 1200, 1450, 1582, 1602
BshVI	ATCGAT	1 cut(s)	1056
BsiHKAI	GWGCWC	3 cut(s)	869, 958, 1101
BsiSI	CCGG	4 cut(s)	210, 660, 706, 1579
BslFI	GGGAC	3 cut(s)	1241, 1296, 1514
BslI	CCNNNNNNNGG	5 cut(s)	176, 712, 1346, 1446, 1585
BsmAI	GTCTC	4 cut(s)	238, 580, 857, 1624
BsmBI	CGTCTC	1 cut(s)	1624
BsmFI	GGGAC	3 cut(s)	1241, 1296, 1514
BsnI	GGCC	6 cut(s)	180, 418, 1200, 1450, 1582, 1602
Bsp1286I	GDGCHC	3 cut(s)	869, 958, 1101
Bsp13I	TCCGGA	1 cut(s)	705
Bsp143I	GATC	9 cut(s)	186, 339, 677, 773, 1053, 1273, 1707, 1734, 1752
BspACI	CCGC	5 cut(s)	92, 126, 814, 1173, 1566
BspANI	GGCC	6 cut(s)	180, 418, 1200, 1450, 1582, 1602
BspCNI	CTCAG	3 cut(s)	173, 1167, 1178
BspDI	ATCGAT	1 cut(s)	1056
BspEI	TCCGGA	1 cut(s)	705
BspHI	TCATGA	1 cut(s)	1755
BspLI	GGNNCC	2 cut(s)	215, 1743
BspMAI	CTGCAG	1 cut(s)	147
BspPI	GGATC	3 cut(s)	181, 685, 781
BspQI	GCTCTTC	2 cut(s)	963, 1106
BsrBI	CCGCTC	1 cut(s)	128
BsrFI	RCCGGY	1 cut(s)	1578
BsrI	ACTGG	1 cut(s)	904
BssAI	RCCGGY	1 cut(s)	1578
BssECI	CCNNGG	4 cut(s)	175, 490, 1201, 1451
BssMI	GATC	9 cut(s)	186, 339, 677, 773, 1053, 1273, 1707, 1734, 1752
BssT1I	CCWWGG	1 cut(s)	1201
Bst2UI	CCWGG	3 cut(s)	177, 491, 1452
Bst4CI	ACNGT	5 cut(s)	33, 715, 1381, 1445, 1505
Bst6I	CTCTTC	4 cut(s)	963, 979, 1106, 1217
BstC8I	GCNNGC	8 cut(s)	286, 309, 507, 865, 1171, 1580, 1604, 1722
BstDEI	CTNAG	4 cut(s)	160, 780, 1154, 1165
BstF5I	GGATG	4 cut(s)	532, 1332, 1412, 1769
BstH2I	RGCGCY	3 cut(s)	560, 1094, 1364
BstHHI	GCGC	4 cut(s)	559, 1093, 1162, 1363
BstKTI	GATC	9 cut(s)	189, 342, 680, 776, 1056, 1276, 1710, 1737, 1755
BstMAI	GTCTC	4 cut(s)	238, 580, 857, 1624
BstMBI	GATC	9 cut(s)	186, 339, 677, 773, 1053, 1273, 1707, 1734, 1752
BstMWI	GCNNNNNNNGC	8 cut(s)	563, 869, 878, 1166, 1336, 1409, 1563, 1692
BstNI	CCWGG	3 cut(s)	177, 491, 1452
BstNSI	RCATGY	5 cut(s)	509, 811, 970, 1021, 1181
BstSCI	CCNGG	5 cut(s)	175, 209, 489, 659, 1450
BstSFI	CTRYAG	1 cut(s)	143
BstV1I	GCAGC	7 cut(s)	823, 865, 1370, 1474, 1496, 1544, 1679
BstV2I	GAAGAC	1 cut(s)	19
BstX2I	RGATCY	3 cut(s)	186, 677, 773
BstYI	RGATCY	3 cut(s)	186, 677, 773
Bsu15I	ATCGAT	1 cut(s)	1056
BsuRI	GGCC	6 cut(s)	180, 418, 1200, 1450, 1582, 1602
BsuTUI	ATCGAT	1 cut(s)	1056
BtgZI	GCGATG	1 cut(s)	758
BtrI	CACGTC	1 cut(s)	1286
BtsCI	GGATG	4 cut(s)	532, 1332, 1412, 1769
BtsIMutI	CAGTG	3 cut(s)	349, 911, 1162
Cac8I	GCNNGC	8 cut(s)	286, 309, 507, 865, 1171, 1580, 1604, 1722
CaiI	CAGNNNCTG	1 cut(s)	1490
CciI	TCATGA	1 cut(s)	1755
CfoI	GCGC	4 cut(s)	559, 1093, 1162, 1363
Cfr10I	RCCGGY	1 cut(s)	1578
Cfr13I	GGNCC	1 cut(s)	1198
ClaI	ATCGAT	1 cut(s)	1056
CseI	GACGC	2 cut(s)	441, 555
Csp6I	GTAC	5 cut(s)	427, 664, 970, 1377, 1382
CviQI	GTAC	5 cut(s)	427, 664, 970, 1377, 1382
DdeI	CTNAG	4 cut(s)	160, 780, 1154, 1165
DpnI	GATC	9 cut(s)	188, 341, 679, 775, 1055, 1275, 1709, 1736, 1754
DpnII	GATC	9 cut(s)	186, 339, 677, 773, 1053, 1273, 1707, 1734, 1752
EaeI	YGGCCR	2 cut(s)	178, 1448
Eam1104I	CTCTTC	4 cut(s)	963, 979, 1106, 1217
EarI	CTCTTC	4 cut(s)	963, 979, 1106, 1217
Ecl136II	GAGCTC	1 cut(s)	1099
Eco130I	CCWWGG	1 cut(s)	1201
Eco147I	AGGCCT	1 cut(s)	418
Eco24I	GRGCYC	1 cut(s)	1101
Eco32I	GATATC	2 cut(s)	657, 1079
Eco47III	AGCGCT	2 cut(s)	1092, 1362
Eco53kI	GAGCTC	1 cut(s)	1099
Eco57I	CTGAAG	2 cut(s)	714, 1087
EcoICRI	GAGCTC	1 cut(s)	1099
EcoO109I	RGGNCCY	1 cut(s)	1198
EcoRII	CCWGG	3 cut(s)	175, 489, 1450
EcoRV	GATATC	2 cut(s)	657, 1079
EcoT14I	CCWWGG	1 cut(s)	1201
EcoT38I	GRGCYC	1 cut(s)	1101
ErhI	CCWWGG	1 cut(s)	1201
Esp3I	CGTCTC	1 cut(s)	1624
FaqI	GGGAC	3 cut(s)	1241, 1296, 1514
FauI	CCCGC	1 cut(s)	99
FbaI	TGATCA	2 cut(s)	339, 1734
FblI	GTMKAC	1 cut(s)	455
Fnu4HI	GCNGC	7 cut(s)	812, 879, 1359, 1485, 1488, 1558, 1693
FokI	GGATG	4 cut(s)	539, 1339, 1399, 1756
FriOI	GRGCYC	1 cut(s)	1101
Fsp4HI	GCNGC	7 cut(s)	812, 879, 1359, 1485, 1488, 1558, 1693
FspBI	CTAG	4 cut(s)	17, 486, 849, 962
GlaI	GCGC	4 cut(s)	558, 1092, 1161, 1362
GluI	GCNGC	7 cut(s)	812, 879, 1359, 1485, 1488, 1558, 1693
GsaI	CCCAGC	2 cut(s)	1185, 1494
HaeII	RGCGCY	3 cut(s)	560, 1094, 1364
HaeIII	GGCC	6 cut(s)	180, 418, 1200, 1450, 1582, 1602
HapII	CCGG	4 cut(s)	210, 660, 706, 1579
HgaI	GACGC	2 cut(s)	441, 555
HhaI	GCGC	4 cut(s)	559, 1093, 1162, 1363
Hin6I	GCGC	4 cut(s)	557, 1091, 1160, 1361
HinP1I	GCGC	4 cut(s)	557, 1091, 1160, 1361
HincII	GTYRAC	2 cut(s)	896, 1674
HindII	GTYRAC	2 cut(s)	896, 1674
HinfI	GANTC	7 cut(s)	374, 498, 588, 670, 1435, 1525, 1777
HpaI	GTTAAC	1 cut(s)	1674
HpaII	CCGG	4 cut(s)	210, 660, 706, 1579
HphI	GGTGA	3 cut(s)	107, 1400, 1580
Hpy166II	GTNNAC	8 cut(s)	36, 429, 456, 799, 896, 937, 1674, 1767
Hpy188I	TCNGA	5 cut(s)	29, 163, 218, 526, 1417
Hpy188III	TCNNGA	6 cut(s)	706, 962, 1082, 1439, 1654, 1756
Hpy8I	GTNNAC	8 cut(s)	36, 429, 456, 799, 896, 937, 1674, 1767
Hpy99I	CGWCG	2 cut(s)	652, 1708
HpyAV	CCTTC	3 cut(s)	180, 387, 746
HpyCH4III	ACNGT	5 cut(s)	33, 715, 1381, 1445, 1505
HpyCH4IV	ACGT	5 cut(s)	38, 431, 647, 1285, 1294
HpyCH4V	TGCA	9 cut(s)	145, 284, 311, 505, 811, 881, 1114, 1300, 1319
HpyF10VI	GCNNNNNNNGC	8 cut(s)	563, 869, 878, 1166, 1336, 1409, 1563, 1692
HpyF3I	CTNAG	4 cut(s)	160, 780, 1154, 1165
HpySE526I	ACGT	5 cut(s)	38, 431, 647, 1285, 1294
HspAI	GCGC	4 cut(s)	557, 1091, 1160, 1361
Kpn2I	TCCGGA	1 cut(s)	705
KroI	GCCGGC	1 cut(s)	1578
KroNI	GCCGGC	1 cut(s)	1580
Ksp22I	TGATCA	2 cut(s)	339, 1734
KspAI	GTTAAC	1 cut(s)	1674
Kzo9I	GATC	9 cut(s)	186, 339, 677, 773, 1053, 1273, 1707, 1734, 1752
LguI	GCTCTTC	2 cut(s)	963, 1106
LmnI	GCTCC	3 cut(s)	249, 1252, 1747
Lsp1109I	GCAGC	7 cut(s)	823, 865, 1370, 1474, 1496, 1544, 1679
LweI	GCATC	5 cut(s)	679, 1215, 1309, 1317, 1421
MaeI	CTAG	4 cut(s)	17, 486, 849, 962
MaeII	ACGT	5 cut(s)	38, 431, 647, 1285, 1294
MaeIII	GTNAC	4 cut(s)	149, 755, 1144, 1505
MalI	GATC	9 cut(s)	188, 341, 679, 775, 1055, 1275, 1709, 1736, 1754
MbiI	CCGCTC	1 cut(s)	128
MboI	GATC	9 cut(s)	186, 339, 677, 773, 1053, 1273, 1707, 1734, 1752
MflI	RGATCY	3 cut(s)	186, 677, 773
MhlI	GDGCHC	3 cut(s)	869, 958, 1101
MlsI	TGGCCA	1 cut(s)	180
MluNI	TGGCCA	1 cut(s)	180
MlyI	GAGTC	3 cut(s)	383, 582, 679
MmeI	TCCRAC	5 cut(s)	241, 504, 603, 751, 850
Mox20I	TGGCCA	1 cut(s)	180
MroI	TCCGGA	1 cut(s)	705
MroNI	GCCGGC	1 cut(s)	1578
MroXI	GAANNNNTTC	2 cut(s)	319, 1763
MscI	TGGCCA	1 cut(s)	180
MseI	TTAA	5 cut(s)	519, 738, 1368, 1428, 1673
MslI	CAYNNNNRTG	2 cut(s)	806, 944
Msp20I	TGGCCA	1 cut(s)	180
MspA1I	CMGCKG	2 cut(s)	814, 1487
MspI	CCGG	4 cut(s)	210, 660, 706, 1579
MspR9I	CCNGG	5 cut(s)	177, 211, 491, 661, 1452
MvaI	CCWGG	3 cut(s)	177, 491, 1452
MwoI	GCNNNNNNNGC	8 cut(s)	563, 869, 878, 1166, 1336, 1409, 1563, 1692
NaeI	GCCGGC	1 cut(s)	1580
NciI	CCSGG	2 cut(s)	211, 661
NdeII	GATC	9 cut(s)	186, 339, 677, 773, 1053, 1273, 1707, 1734, 1752
NgoMIV	GCCGGC	1 cut(s)	1578
NlaIV	GGNNCC	2 cut(s)	215, 1743
NmeAIII	GCCGAG	2 cut(s)	570, 848
NmuCI	GTSAC	1 cut(s)	1144
NspI	RCATGY	5 cut(s)	509, 811, 970, 1021, 1181
PaeI	GCATGC	1 cut(s)	509
PagI	TCATGA	1 cut(s)	1755
PceI	AGGCCT	1 cut(s)	418
PciI	ACATGT	1 cut(s)	966
PciSI	GCTCTTC	2 cut(s)	963, 1106
PcsI	WCGNNNNNNNCGW	1 cut(s)	1291
PdiI	GCCGGC	1 cut(s)	1580
PdmI	GAANNNNTTC	2 cut(s)	319, 1763
PfeI	GAWTC	4 cut(s)	498, 1435, 1525, 1777
PkrI	GCNGC	7 cut(s)	813, 880, 1360, 1486, 1489, 1559, 1694
PleI	GAGTC	3 cut(s)	382, 582, 678
PpsI	GAGTC	3 cut(s)	382, 582, 678
PscI	ACATGT	1 cut(s)	966
PsiI	TTATAA	1 cut(s)	330
Psp124BI	GAGCTC	1 cut(s)	1101
Psp6I	CCWGG	3 cut(s)	175, 489, 1450
PspFI	CCCAGC	2 cut(s)	1181, 1490
PspGI	CCWGG	3 cut(s)	175, 489, 1450
PspN4I	GGNNCC	2 cut(s)	215, 1743
PspPI	GGNCC	1 cut(s)	1198
PstI	CTGCAG	1 cut(s)	147
PstNI	CAGNNNCTG	1 cut(s)	1490
PsuI	RGATCY	3 cut(s)	186, 677, 773
PvuII	CAGCTG	1 cut(s)	1487
RsaI	GTAC	5 cut(s)	428, 665, 971, 1378, 1383
RsaNI	GTAC	5 cut(s)	427, 664, 970, 1377, 1382
RseI	CAYNNNNRTG	2 cut(s)	806, 944
SacI	GAGCTC	1 cut(s)	1101
SapI	GCTCTTC	2 cut(s)	963, 1106
SaqAI	TTAA	5 cut(s)	519, 738, 1368, 1428, 1673
SatI	GCNGC	7 cut(s)	812, 879, 1359, 1485, 1488, 1558, 1693
Sau3AI	GATC	9 cut(s)	186, 339, 677, 773, 1053, 1273, 1707, 1734, 1752
Sau96I	GGNCC	1 cut(s)	1198
SchI	GAGTC	3 cut(s)	383, 582, 679
ScrFI	CCNGG	5 cut(s)	177, 211, 491, 661, 1452
SduI	GDGCHC	3 cut(s)	869, 958, 1101
SfaNI	GCATC	5 cut(s)	679, 1215, 1309, 1317, 1421
SfcI	CTRYAG	1 cut(s)	143
SmiMI	CAYNNNNRTG	2 cut(s)	806, 944
SmlI	CTYRAG	2 cut(s)	791, 1094
SmoI	CTYRAG	2 cut(s)	791, 1094
SphI	GCATGC	1 cut(s)	509
SseBI	AGGCCT	1 cut(s)	418
SsiI	CCGC	5 cut(s)	92, 126, 814, 1173, 1566
SspMI	CTAG	4 cut(s)	17, 486, 849, 962
SstI	GAGCTC	1 cut(s)	1101
StuI	AGGCCT	1 cut(s)	418
StyD4I	CCNGG	5 cut(s)	175, 209, 489, 659, 1450
StyI	CCWWGG	1 cut(s)	1201
TaaI	ACNGT	5 cut(s)	33, 715, 1381, 1445, 1505
TaiI	ACGT	5 cut(s)	41, 434, 650, 1288, 1297
TaqI	TCGA	5 cut(s)	297, 650, 974, 1056, 1751
TatI	WGTACW	3 cut(s)	969, 1376, 1381
TfiI	GAWTC	4 cut(s)	498, 1435, 1525, 1777
Tru1I	TTAA	5 cut(s)	519, 738, 1368, 1428, 1673
Tru9I	TTAA	5 cut(s)	519, 738, 1368, 1428, 1673
TscAI	CASTG	3 cut(s)	349, 911, 1162
TseFI	GTSAC	1 cut(s)	1144
TseI	GCWGC	7 cut(s)	811, 878, 1358, 1484, 1487, 1557, 1692
Tsp45I	GTSAC	1 cut(s)	1144
TspGWI	ACGGA	2 cut(s)	1015, 1624
TspRI	CASTG	3 cut(s)	349, 911, 1162
XapI	RAATTY	2 cut(s)	820, 1005
XbaI	TCTAGA	1 cut(s)	961
XceI	RCATGY	5 cut(s)	509, 811, 970, 1021, 1181
XmiI	GTMKAC	1 cut(s)	455
XmnI	GAANNNNTTC	2 cut(s)	319, 1763
XspI	CTAG	4 cut(s)	17, 486, 849, 962

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.