Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0016088

Physical Location & Seq

Genomic Coordinates Forward (+)

7893201 .. 7894793

Gene Structure 1593 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G007440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1593 bp

ATGAAAGTTAGAAGACTAGCCACAATCAGACCGTCCACGTTGTTATCTTCCCAAAACCACAAACCTCCTCTCCCCCCAAATCAAGTTTTCCCGCCAACACAATCCCCTGCCCCTCACCCAGACAGTACCACTCTATCCTCTGCTCTGCAGAGTTACATCAACTCAGACAACCCTTCCCCTGGCCAAAAGATCCATGCCCATATTCTCAAATCCGGGTTCCGACCCAATAACAATGTCTCCATCAAGCTCCTCATACTCCACCTGAAATGTGGTTCGTTGAAATATGCACGCCAGATGTTCGATGAATTGCCTGCGAGGACCCTTTCCTCTTATAATTACTTGATCAGTGGAAATCTCAAGCATGGGGAAGTAGAGGAGTCGATCAATTTGGTTAGAAGGCTTGTTTTATGTGGGGAAAGGCCTGATGGCTACACGTTTTCGATGATTTTGAAAGCGTCTACTTGTAATGGTAATGTGCCGTTGCCGTCTAGCTTAGGGAGAATGGTGCATGCCCGGATAATTAAGTCGGATGTTGAGGCTGATGATGTGCTTTATACGGCGCTTGTTGCGTCTTATGTTAGGAATGGGAGACTCGGCTATGCGAGGAGTGTGTTTGATATGATGTTGGAGAAGAATATCGTGTGTTCAACATCGATGATATCCGGGTACATGAGTCAAGGATCTGTGGAAGATGCTGAAGATATATTCCGGAGAACGGTTGAGAAAGATGTTGTGGTGTTTAATGCAATGATTGAAGGTTACAGCAAATCGGTTGGATCTGCTAAGAAATCGCTTGAGGTTTACATTGACATGCAGCGGTTGAATTTCCAACCTAACATCTCTACATTTGCTAGTCTCATCGGGGCGTGCTCGGCTCTGGCTGCATTTGAAATTGGTCAACAAGTCCAGTGTCAGCTAATGAAAACTAACTTATTCATGGACATAAAGATGGGAAGTGCTCTTCTAGACATGTACTCGAAATGTGGAAGAGTTGAGGAGGCACGGAGAATTTTTGACCACATGCCTCAAAGAAATGTATTTTCATGGACTTCAATGATCGATGGTTATGGGAAGAATGGATATCCTGATGAAGCACTTGAGCTCTTCAGTATAATGCAGAAAGAACACCATATCAAACCCAATTTTGTAACATTCCTCAGCGCACTCTCAGCTTGCGGACATGCTGGGCTGGTTGATAAGGGCCTTGACATCTTCGAAAGCATGAAGAGGGACTACTCAATAAAACCAACAATGGAGCATTATGCTTGTATGGTTGATCTCTTGGGACGTGCTGGACGTTTGCATCAAGCATGGGAGTTTGCAAAGGGGATTCCTGAGAAGCCCAATTCCGGTGTTTGGGCAGCGCTTCTTAGTTCAAGTACAGTACATGGTGATATTGAGATGGCAAGGTTAGCATCCGATGAACTTTTTAAGCTGAATCCAGACAGTCGGCCAGGGGCATATGTTTCATTCTCTAATAATTTGGCAGCTGCTGGGAAATGGGACAGTGTAAGTGAGCTTAGAGAGAAAATGAAGGCACGAGGGATATCTAAAGATATTGGCTGGAGTTTGGTTGGTACCGATAGTAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

530

Amino Acids

58.73

Weight (kDa)

8.67

Isoelectric Point (pI)

41.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	242 - 290	3.7e-09	PPR repeat family
PPR_2	PF13041	344 - 392	2.1e-10	PPR repeat family
PPR_1	PF12854	344 - 372	2.6e-06	PPR repeat
PPR	PF01535	347 - 375	1.5e-09	PPR repeat
E_motif	PF20431	463 - 525	2.5e-09	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0016088)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28690
fragaria_vesca	FvH4_5g29510
malus_domestica	MD10G1283700.v1.1
prunus_persica	Prupe.4G058100_v2.0.a1
pyrus_communis	pycom05g28160 pycom10g23660
rosa_chinensis	RchiOBHm_Chr5g0010161
rosa_laevigata	RLG00000031727
rosa_roxburghii	Rroxscaffold_1G00066030
rosa_rugosa	Rorug04G0449500
rosa_samantha	Rh5AG080400 Rh5BG074900 Rh5CG088700 Rh5DG075900
rosa_wichuraiana	Rw5G007440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	333
Acc65I	GGTACC	1 cut(s)	1577
AccB1I	GGYRCC	1 cut(s)	1577
AccI	GTMKAC	1 cut(s)	458
AccIII	TCCGGA	1 cut(s)	708
AciI	CCGC	3 cut(s)	92, 817, 1176
AclWI	GGATC	3 cut(s)	184, 688, 784
AcoI	YGGCCR	2 cut(s)	181, 1451
AcsI	RAATTY	2 cut(s)	823, 1008
AcuI	CTGAAG	2 cut(s)	717, 1090
AfaI	GTAC	6 cut(s)	127, 668, 974, 1381, 1386, 1579
AfeI	AGCGCT	1 cut(s)	1365
AfiI	CCNNNNNNNGG	4 cut(s)	179, 715, 1349, 1356
AflIII	ACRYGT	2 cut(s)	432, 969
AgsI	TTSAA	8 cut(s)	280, 451, 648, 755, 823, 890, 1053, 1377
AjiI	CACGTC	1 cut(s)	1289
AjnI	CCWGG	2 cut(s)	178, 1453
AluBI	AGCT	8 cut(s)	247, 492, 916, 1102, 1172, 1435, 1490, 1519
AluI	AGCT	8 cut(s)	247, 492, 916, 1102, 1172, 1435, 1490, 1519
Alw21I	GWGCWC	3 cut(s)	872, 961, 1104
Alw26I	GTCTC	3 cut(s)	241, 583, 860
AlwI	GGATC	3 cut(s)	184, 688, 784
AlwNI	CAGNNNCTG	1 cut(s)	1493
Aor13HI	TCCGGA	1 cut(s)	708
Aor51HI	AGCGCT	1 cut(s)	1365
AoxI	GGCC	4 cut(s)	181, 419, 1201, 1451
ApeKI	GCWGC	5 cut(s)	814, 881, 1361, 1487, 1490
ApoI	RAATTY	2 cut(s)	823, 1008
Asp718I	GGTACC	1 cut(s)	1577
AspLEI	GCGC	3 cut(s)	562, 1163, 1366
AspS9I	GGNCC	2 cut(s)	318, 1201
AsuC2I	CCSGG	3 cut(s)	214, 514, 664
AsuHPI	GGTGA	2 cut(s)	107, 1403
AsuII	TTCGAA	1 cut(s)	1215
AvaII	GGWCC	1 cut(s)	318
BaeI	ACNNNNGTAYC	2 cut(s)	658, 691
BalI	TGGCCA	1 cut(s)	183
BanI	GGYRCC	1 cut(s)	1577
BanII	GRGCYC	1 cut(s)	1104
BarI	GAAGNNNNNNTAC	2 cut(s)	1217, 1249
BauI	CACGAG	1 cut(s)	1539
BbsI	GAAGAC	1 cut(s)	19
Bbv12I	GWGCWC	3 cut(s)	872, 961, 1104
BbvCI	CCTCAGC	1 cut(s)	1157
BbvI	GCAGC	5 cut(s)	826, 868, 1373, 1477, 1499
BccI	CCATC	5 cut(s)	248, 419, 943, 1055, 1396
BceAI	ACGGC	3 cut(s)	463, 469, 573
BciT130I	CCWGG	2 cut(s)	180, 1455
BclI	TGATCA	1 cut(s)	342
BcnI	CCSGG	3 cut(s)	214, 514, 664
BcoDI	GTCTC	3 cut(s)	241, 583, 860
BfaI	CTAG	4 cut(s)	17, 489, 852, 965
BfmI	CTRYAG	1 cut(s)	146
BfoI	RGCGCY	2 cut(s)	563, 1367
BisI	GCNGC	5 cut(s)	815, 882, 1362, 1488, 1491
BlsI	GCNGC	5 cut(s)	816, 883, 1363, 1489, 1492
Bme1390I	CCNGG	5 cut(s)	180, 214, 514, 664, 1455
Bme18I	GGWCC	1 cut(s)	318
BmgBI	CACGTC	1 cut(s)	1289
BmgT120I	GGNCC	2 cut(s)	318, 1201
BmiI	GGNNCC	3 cut(s)	218, 320, 1579
BmrFI	CCNGG	5 cut(s)	180, 214, 514, 664, 1455
BmsI	GCATC	3 cut(s)	682, 1312, 1424
BpiI	GAAGAC	1 cut(s)	19
BpmI	CTGGAG	1 cut(s)	1585
Bpu10I	CCTNAGC	2 cut(s)	493, 1157
Bpu14I	TTCGAA	1 cut(s)	1215
BpuEI	CTTGAG	3 cut(s)	341, 815, 1118
BpuMI	CCSGG	3 cut(s)	214, 514, 664
Bsa29I	ATCGAT	2 cut(s)	653, 1059
BsaJI	CCNNGG	2 cut(s)	178, 1454
BsaWI	WCCGGW	2 cut(s)	708, 1349
BsaXI	ACNNNNNCTCC	4 cut(s)	54, 84, 221, 251
Bsc4I	CCNNNNNNNGG	4 cut(s)	179, 715, 1349, 1356
Bse1I	ACTGG	1 cut(s)	907
Bse3DI	GCAATG	1 cut(s)	753
BseAI	TCCGGA	1 cut(s)	708
BseBI	CCWGG	2 cut(s)	180, 1455
BseCI	ATCGAT	2 cut(s)	653, 1059
BseDI	CCNNGG	2 cut(s)	178, 1454
BseGI	GGATG	2 cut(s)	535, 1415
BseLI	CCNNNNNNNGG	4 cut(s)	179, 715, 1349, 1356
BseMI	GCAATG	1 cut(s)	753
BseMII	CTCAG	4 cut(s)	177, 1171, 1182, 1326
BseNI	ACTGG	1 cut(s)	907
BseRI	GAGGAG	5 cut(s)	57, 239, 389, 619, 1010
BseXI	GCAGC	5 cut(s)	826, 868, 1373, 1477, 1499
BseYI	CCCAGC	2 cut(s)	1184, 1493
BshFI	GGCC	4 cut(s)	183, 421, 1203, 1453
BshNI	GGYRCC	1 cut(s)	1577
BshVI	ATCGAT	2 cut(s)	653, 1059
BsiHKAI	GWGCWC	3 cut(s)	872, 961, 1104
BsiSI	CCGG	5 cut(s)	213, 514, 663, 709, 1350
BslFI	GGGAC	3 cut(s)	1244, 1299, 1517
BslI	CCNNNNNNNGG	4 cut(s)	179, 715, 1349, 1356
BsmAI	GTCTC	3 cut(s)	241, 583, 860
BsmFI	GGGAC	3 cut(s)	1244, 1299, 1517
BsnI	GGCC	4 cut(s)	183, 421, 1203, 1453
Bsp119I	TTCGAA	1 cut(s)	1215
Bsp1286I	GDGCHC	3 cut(s)	872, 961, 1104
Bsp13I	TCCGGA	1 cut(s)	708
Bsp143I	GATC	7 cut(s)	189, 342, 381, 680, 776, 1056, 1276
BspACI	CCGC	3 cut(s)	92, 817, 1176
BspANI	GGCC	4 cut(s)	183, 421, 1203, 1453
BspCNI	CTCAG	4 cut(s)	176, 1170, 1181, 1327
BspDI	ATCGAT	2 cut(s)	653, 1059
BspEI	TCCGGA	1 cut(s)	708
BspLI	GGNNCC	3 cut(s)	218, 320, 1579
BspMAI	CTGCAG	1 cut(s)	150
BspPI	GGATC	3 cut(s)	184, 688, 784
BspQI	GCTCTTC	2 cut(s)	966, 1109
BspT104I	TTCGAA	1 cut(s)	1215
BspT107I	GGYRCC	1 cut(s)	1577
BsrDI	GCAATG	1 cut(s)	753
BsrI	ACTGG	1 cut(s)	907
BssECI	CCNNGG	2 cut(s)	178, 1454
BssMI	GATC	7 cut(s)	189, 342, 381, 680, 776, 1056, 1276
BssSI	CACGAG	1 cut(s)	1539
Bst2BI	CACGAG	1 cut(s)	1539
Bst2UI	CCWGG	2 cut(s)	180, 1455
Bst4CI	ACNGT	6 cut(s)	33, 125, 718, 1384, 1448, 1508
Bst6I	CTCTTC	4 cut(s)	966, 982, 1109, 1220
BstBI	TTCGAA	1 cut(s)	1215
BstC8I	GCNNGC	5 cut(s)	289, 312, 510, 868, 1174
BstDEI	CTNAG	8 cut(s)	163, 493, 783, 1157, 1168, 1335, 1370, 1520
BstF5I	GGATG	2 cut(s)	535, 1415
BstH2I	RGCGCY	2 cut(s)	563, 1367
BstHHI	GCGC	3 cut(s)	562, 1163, 1366
BstKTI	GATC	7 cut(s)	192, 345, 384, 683, 779, 1059, 1279
BstMAI	GTCTC	3 cut(s)	241, 583, 860
BstMBI	GATC	7 cut(s)	189, 342, 381, 680, 776, 1056, 1276
BstMWI	GCNNNNNNNGC	5 cut(s)	566, 872, 881, 1169, 1412
BstNI	CCWGG	2 cut(s)	180, 1455
BstNSI	RCATGY	5 cut(s)	512, 814, 973, 1024, 1184
BstSCI	CCNGG	5 cut(s)	178, 212, 512, 662, 1453
BstSFI	CTRYAG	1 cut(s)	146
BstV1I	GCAGC	5 cut(s)	826, 868, 1373, 1477, 1499
BstV2I	GAAGAC	1 cut(s)	19
BstX2I	RGATCY	3 cut(s)	189, 680, 776
BstYI	RGATCY	3 cut(s)	189, 680, 776
Bsu15I	ATCGAT	2 cut(s)	653, 1059
BsuRI	GGCC	4 cut(s)	183, 421, 1203, 1453
BsuTUI	ATCGAT	2 cut(s)	653, 1059
BtrI	CACGTC	1 cut(s)	1289
BtsCI	GGATG	2 cut(s)	535, 1415
BtsIMutI	CAGTG	3 cut(s)	352, 914, 1513
Cac8I	GCNNGC	5 cut(s)	289, 312, 510, 868, 1174
CaiI	CAGNNNCTG	1 cut(s)	1493
CfoI	GCGC	3 cut(s)	562, 1163, 1366
Cfr13I	GGNCC	2 cut(s)	318, 1201
ClaI	ATCGAT	2 cut(s)	653, 1059
CseI	GACGC	2 cut(s)	444, 558
Csp6I	GTAC	6 cut(s)	126, 667, 973, 1380, 1385, 1578
CviQI	GTAC	6 cut(s)	126, 667, 973, 1380, 1385, 1578
DdeI	CTNAG	8 cut(s)	163, 493, 783, 1157, 1168, 1335, 1370, 1520
DpnI	GATC	7 cut(s)	191, 344, 383, 682, 778, 1058, 1278
DpnII	GATC	7 cut(s)	189, 342, 381, 680, 776, 1056, 1276
EaeI	YGGCCR	2 cut(s)	181, 1451
Eam1104I	CTCTTC	4 cut(s)	966, 982, 1109, 1220
EarI	CTCTTC	4 cut(s)	966, 982, 1109, 1220
Ecl136II	GAGCTC	1 cut(s)	1102
Eco147I	AGGCCT	1 cut(s)	421
Eco24I	GRGCYC	1 cut(s)	1104
Eco32I	GATATC	3 cut(s)	660, 1082, 1548
Eco47I	GGWCC	1 cut(s)	318
Eco47III	AGCGCT	1 cut(s)	1365
Eco53kI	GAGCTC	1 cut(s)	1102
Eco57I	CTGAAG	2 cut(s)	717, 1090
EcoICRI	GAGCTC	1 cut(s)	1102
EcoO109I	RGGNCCY	2 cut(s)	318, 1201
EcoRII	CCWGG	2 cut(s)	178, 1453
EcoRV	GATATC	3 cut(s)	660, 1082, 1548
EcoT38I	GRGCYC	1 cut(s)	1104
FaqI	GGGAC	3 cut(s)	1244, 1299, 1517
FauI	CCCGC	1 cut(s)	99
FauNDI	CATATG	1 cut(s)	1462
FbaI	TGATCA	1 cut(s)	342
FblI	GTMKAC	1 cut(s)	458
Fnu4HI	GCNGC	5 cut(s)	815, 882, 1362, 1488, 1491
FokI	GGATG	2 cut(s)	542, 1402
FriOI	GRGCYC	1 cut(s)	1104
Fsp4HI	GCNGC	5 cut(s)	815, 882, 1362, 1488, 1491
FspBI	CTAG	4 cut(s)	17, 489, 852, 965
GlaI	GCGC	3 cut(s)	561, 1162, 1365
GluI	GCNGC	5 cut(s)	815, 882, 1362, 1488, 1491
GsaI	CCCAGC	2 cut(s)	1188, 1497
GsuI	CTGGAG	1 cut(s)	1585
HaeII	RGCGCY	2 cut(s)	563, 1367
HaeIII	GGCC	4 cut(s)	183, 421, 1203, 1453
HapII	CCGG	5 cut(s)	213, 514, 663, 709, 1350
HgaI	GACGC	2 cut(s)	444, 558
HhaI	GCGC	3 cut(s)	562, 1163, 1366
Hin6I	GCGC	3 cut(s)	560, 1161, 1364
HinP1I	GCGC	3 cut(s)	560, 1161, 1364
HincII	GTYRAC	1 cut(s)	899
HindII	GTYRAC	1 cut(s)	899
HinfI	GANTC	5 cut(s)	377, 591, 673, 1330, 1438
HpaII	CCGG	5 cut(s)	213, 514, 663, 709, 1350
HphI	GGTGA	2 cut(s)	107, 1403
Hpy166II	GTNNAC	4 cut(s)	36, 459, 802, 899
Hpy188I	TCNGA	5 cut(s)	29, 166, 221, 529, 1420
Hpy188III	TCNNGA	5 cut(s)	709, 965, 1085, 1334, 1442
Hpy8I	GTNNAC	4 cut(s)	36, 459, 802, 899
HpyAV	CCTTC	4 cut(s)	183, 390, 749, 1528
HpyCH4III	ACNGT	6 cut(s)	33, 125, 718, 1384, 1448, 1508
HpyCH4IV	ACGT	4 cut(s)	38, 434, 1288, 1297
HpyCH4V	TGCA	9 cut(s)	148, 287, 508, 746, 814, 884, 1117, 1303, 1322
HpyF10VI	GCNNNNNNNGC	5 cut(s)	566, 872, 881, 1169, 1412
HpyF3I	CTNAG	8 cut(s)	163, 493, 783, 1157, 1168, 1335, 1370, 1520
HpySE526I	ACGT	4 cut(s)	38, 434, 1288, 1297
HspAI	GCGC	3 cut(s)	560, 1161, 1364
Kpn2I	TCCGGA	1 cut(s)	708
KpnI	GGTACC	1 cut(s)	1581
Ksp22I	TGATCA	1 cut(s)	342
Kzo9I	GATC	7 cut(s)	189, 342, 381, 680, 776, 1056, 1276
LguI	GCTCTTC	2 cut(s)	966, 1109
LmnI	GCTCC	2 cut(s)	252, 1255
Lsp1109I	GCAGC	5 cut(s)	826, 868, 1373, 1477, 1499
LweI	GCATC	3 cut(s)	682, 1312, 1424
MaeI	CTAG	4 cut(s)	17, 489, 852, 965
MaeII	ACGT	4 cut(s)	38, 434, 1288, 1297
MaeIII	GTNAC	3 cut(s)	152, 758, 1147
MalI	GATC	7 cut(s)	191, 344, 383, 682, 778, 1058, 1278
MboI	GATC	7 cut(s)	189, 342, 381, 680, 776, 1056, 1276
MflI	RGATCY	3 cut(s)	189, 680, 776
MhlI	GDGCHC	3 cut(s)	872, 961, 1104
MlsI	TGGCCA	1 cut(s)	183
MluNI	TGGCCA	1 cut(s)	183
MlyI	GAGTC	3 cut(s)	386, 585, 682
MmeI	TCCRAC	5 cut(s)	244, 507, 606, 754, 853
Mox20I	TGGCCA	1 cut(s)	183
MroI	TCCGGA	1 cut(s)	708
MscI	TGGCCA	1 cut(s)	183
MseI	TTAA	3 cut(s)	522, 741, 1431
MslI	CAYNNNNRTG	2 cut(s)	809, 947
Msp20I	TGGCCA	1 cut(s)	183
MspA1I	CMGCKG	2 cut(s)	817, 1490
MspI	CCGG	5 cut(s)	213, 514, 663, 709, 1350
MspR9I	CCNGG	5 cut(s)	180, 214, 514, 664, 1455
MvaI	CCWGG	2 cut(s)	180, 1455
MwoI	GCNNNNNNNGC	5 cut(s)	566, 872, 881, 1169, 1412
NciI	CCSGG	3 cut(s)	214, 514, 664
NdeI	CATATG	1 cut(s)	1462
NdeII	GATC	7 cut(s)	189, 342, 381, 680, 776, 1056, 1276
NlaIV	GGNNCC	3 cut(s)	218, 320, 1579
NmeAIII	GCCGAG	2 cut(s)	573, 851
NspI	RCATGY	5 cut(s)	512, 814, 973, 1024, 1184
NspV	TTCGAA	1 cut(s)	1215
PaeI	GCATGC	1 cut(s)	512
PceI	AGGCCT	1 cut(s)	421
PciI	ACATGT	1 cut(s)	969
PciSI	GCTCTTC	2 cut(s)	966, 1109
PcsI	WCGNNNNNNNCGW	1 cut(s)	1294
PfeI	GAWTC	2 cut(s)	1330, 1438
PkrI	GCNGC	5 cut(s)	816, 883, 1363, 1489, 1492
PleI	GAGTC	3 cut(s)	385, 585, 681
PpsI	GAGTC	3 cut(s)	385, 585, 681
PpuMI	RGGWCCY	1 cut(s)	318
PscI	ACATGT	1 cut(s)	969
PsiI	TTATAA	1 cut(s)	333
Psp124BI	GAGCTC	1 cut(s)	1104
Psp5II	RGGWCCY	1 cut(s)	318
Psp6I	CCWGG	2 cut(s)	178, 1453
PspFI	CCCAGC	2 cut(s)	1184, 1493
PspGI	CCWGG	2 cut(s)	178, 1453
PspN4I	GGNNCC	3 cut(s)	218, 320, 1579
PspPI	GGNCC	2 cut(s)	318, 1201
PspPPI	RGGWCCY	1 cut(s)	318
PstI	CTGCAG	1 cut(s)	150
PstNI	CAGNNNCTG	1 cut(s)	1493
PsuI	RGATCY	3 cut(s)	189, 680, 776
PvuII	CAGCTG	1 cut(s)	1490
RsaI	GTAC	6 cut(s)	127, 668, 974, 1381, 1386, 1579
RsaNI	GTAC	6 cut(s)	126, 667, 973, 1380, 1385, 1578
RseI	CAYNNNNRTG	2 cut(s)	809, 947
SacI	GAGCTC	1 cut(s)	1104
SapI	GCTCTTC	2 cut(s)	966, 1109
SaqAI	TTAA	3 cut(s)	522, 741, 1431
SatI	GCNGC	5 cut(s)	815, 882, 1362, 1488, 1491
Sau3AI	GATC	7 cut(s)	189, 342, 381, 680, 776, 1056, 1276
Sau96I	GGNCC	2 cut(s)	318, 1201
SchI	GAGTC	3 cut(s)	386, 585, 682
ScrFI	CCNGG	5 cut(s)	180, 214, 514, 664, 1455
SduI	GDGCHC	3 cut(s)	872, 961, 1104
SfaNI	GCATC	3 cut(s)	682, 1312, 1424
SfcI	CTRYAG	1 cut(s)	146
SfuI	TTCGAA	1 cut(s)	1215
SinI	GGWCC	1 cut(s)	318
SmiMI	CAYNNNNRTG	2 cut(s)	809, 947
SmlI	CTYRAG	3 cut(s)	356, 794, 1097
SmoI	CTYRAG	3 cut(s)	356, 794, 1097
SphI	GCATGC	1 cut(s)	512
SseBI	AGGCCT	1 cut(s)	421
SsiI	CCGC	3 cut(s)	92, 817, 1176
SspMI	CTAG	4 cut(s)	17, 489, 852, 965
SstI	GAGCTC	1 cut(s)	1104
StuI	AGGCCT	1 cut(s)	421
StyD4I	CCNGG	5 cut(s)	178, 212, 512, 662, 1453
TaaI	ACNGT	6 cut(s)	33, 125, 718, 1384, 1448, 1508
TaiI	ACGT	4 cut(s)	41, 437, 1291, 1300
TaqI	TCGA	7 cut(s)	300, 380, 440, 653, 977, 1059, 1215
TatI	WGTACW	3 cut(s)	972, 1379, 1384
TfiI	GAWTC	2 cut(s)	1330, 1438
Tru1I	TTAA	3 cut(s)	522, 741, 1431
Tru9I	TTAA	3 cut(s)	522, 741, 1431
TscAI	CASTG	3 cut(s)	352, 914, 1513
TseI	GCWGC	5 cut(s)	814, 881, 1361, 1487, 1490
TspGWI	ACGGA	1 cut(s)	1018
TspRI	CASTG	3 cut(s)	352, 914, 1513
VpaK11BI	GGWCC	1 cut(s)	318
XapI	RAATTY	2 cut(s)	823, 1008
XbaI	TCTAGA	1 cut(s)	964
XceI	RCATGY	5 cut(s)	512, 814, 973, 1024, 1184
XcmI	CCANNNNNNNNNTGG	1 cut(s)	266
XmiI	GTMKAC	1 cut(s)	458
XspI	CTAG	4 cut(s)	17, 489, 852, 965

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.