RLG00000034571

callose synthase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
45099608 .. 45100947
1340 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034571

Sequence Viewer

Length: 450 bp
ATGATTGGATGGATTGGAAGAGGTGGATGGGAATTGATGTCTCACTGGAAGAAAGTTGGGAATCATGGTGGGACGAAGAATAGGAACACCTCAAACACATGGGTATCAGGCGAAGAAGATAACACTTGCAGTCCACTTCTTTGTTTACCACCTGGAATCCTGGATATAGCTCACCACAACAAAGACTACTGGTTTATGGACTTTCTTGGGCTGTTGTGGTATCCGTCCTTCTCATCTTTAAGATATTTTACTCAGATGGTTTCTATGCGGAGACGAAGATTTTACACCAACTTTCAGCTCAAGTTCAGGATACTGAAGTTGCTTCTTTTTCTTTGCTACATATCAATCATGAGCGTCTTGTTTGTATTTTGTGATCCCACCATTTCAGATCTATTTGCTGCTATGCTTGCTTTCTTTCCCACAGGGTGGGGCCCTCTTCAGATAGGATAA

Protein Analysis

150

Amino Acids

17.35

Weight (kDa)

9.21

Isoelectric Point (pI)

44.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0020564)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0048961
rosa_laevigata RLG00000034571
rosa_multiflora Rmu_sc0007946.1_g000002
rosa_rugosa Rorug05G0241400
rosa_samantha Rh5AG321500
rosa_wichuraiana Rw5G030340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 426
AciI CCGC 1 cut(s) 268
AclWI GGATC 1 cut(s) 368
AcuI CTGAAG 2 cut(s) 335, 422
AdeI CACNNNGTG 1 cut(s) 426
AfiI CCNNNNNNNGG 1 cut(s) 426
AjnI CCWGG 2 cut(s) 151, 159
AluBI AGCT 2 cut(s) 170, 298
AluI AGCT 2 cut(s) 170, 298
Alw26I GTCTC 2 cut(s) 45, 265
AlwI GGATC 1 cut(s) 368
AoxI GGCC 1 cut(s) 430
ApaI GGGCCC 1 cut(s) 434
ApeKI GCWGC 1 cut(s) 398
AspS9I GGNCC 2 cut(s) 430, 431
AsuHPI GGTGA 1 cut(s) 164
BaeGI GKGCMC 1 cut(s) 434
BaeI ACNNNNGTAYC 4 cut(s) 87, 120, 302, 335
BanII GRGCYC 1 cut(s) 434
BarI GAAGNNNNNNTAC 2 cut(s) 212, 244
BbvI GCAGC 1 cut(s) 385
BccI CCATC 3 cut(s) 3, 21, 250
BciT130I CCWGG 2 cut(s) 153, 161
BciVI GTATCC 2 cut(s) 231, 303
BcoDI GTCTC 2 cut(s) 45, 265
BfuI GTATCC 2 cut(s) 231, 303
BglII AGATCT 1 cut(s) 388
BisI GCNGC 1 cut(s) 399
BlsI GCNGC 1 cut(s) 400
Bme1390I CCNGG 2 cut(s) 153, 161
BmgT120I GGNCC 2 cut(s) 430, 431
BmiI GGNNCC 2 cut(s) 431, 432
BmrFI CCNGG 2 cut(s) 153, 161
BpuEI CTTGAG 1 cut(s) 284
Bsc4I CCNNNNNNNGG 1 cut(s) 426
Bse1I ACTGG 2 cut(s) 50, 194
BseBI CCWGG 2 cut(s) 153, 161
BseGI GGATG 2 cut(s) 14, 32
BseLI CCNNNNNNNGG 1 cut(s) 426
BseMII CTCAG 1 cut(s) 266
BseNI ACTGG 2 cut(s) 50, 194
BseSI GKGCMC 1 cut(s) 434
BseXI GCAGC 1 cut(s) 385
BshFI GGCC 1 cut(s) 432
BslFI GGGAC 1 cut(s) 85
BslI CCNNNNNNNGG 1 cut(s) 426
BsmAI GTCTC 2 cut(s) 45, 265
BsmBI CGTCTC 1 cut(s) 265
BsmFI GGGAC 1 cut(s) 85
BsnI GGCC 1 cut(s) 432
Bsp120I GGGCCC 1 cut(s) 430
Bsp1286I GDGCHC 1 cut(s) 434
Bsp143I GATC 2 cut(s) 373, 388
BspACI CCGC 1 cut(s) 268
BspANI GGCC 1 cut(s) 432
BspCNI CTCAG 1 cut(s) 265
BspHI TCATGA 1 cut(s) 348
BspLI GGNNCC 2 cut(s) 431, 432
BspPI GGATC 1 cut(s) 368
BsrI ACTGG 2 cut(s) 50, 194
BssMI GATC 2 cut(s) 373, 388
Bst2UI CCWGG 2 cut(s) 153, 161
Bst6I CTCTTC 2 cut(s) 13, 441
BstC8I GCNNGC 1 cut(s) 408
BstDEI CTNAG 1 cut(s) 252
BstF5I GGATG 2 cut(s) 14, 32
BstKTI GATC 2 cut(s) 376, 391
BstMAI GTCTC 2 cut(s) 45, 265
BstMBI GATC 2 cut(s) 373, 388
BstMWI GCNNNNNNNGC 1 cut(s) 407
BstNI CCWGG 2 cut(s) 153, 161
BstSCI CCNGG 2 cut(s) 151, 159
BstSLI GKGCMC 1 cut(s) 434
BstV1I GCAGC 1 cut(s) 385
BstX2I RGATCY 1 cut(s) 388
BstYI RGATCY 1 cut(s) 388
BsuI GTATCC 2 cut(s) 231, 303
BsuRI GGCC 1 cut(s) 432
BtsCI GGATG 2 cut(s) 14, 32
BtsIMutI CAGTG 1 cut(s) 43
Cac8I GCNNGC 1 cut(s) 408
CciI TCATGA 1 cut(s) 348
Cfr13I GGNCC 2 cut(s) 430, 431
CseI GACGC 1 cut(s) 343
CviAII CATG 3 cut(s) 65, 99, 349
CviJI RGCY 4 cut(s) 170, 211, 298, 432
CviKI_1 RGCY 4 cut(s) 170, 211, 298, 432
DdeI CTNAG 1 cut(s) 252
DpnI GATC 2 cut(s) 375, 390
DpnII GATC 2 cut(s) 373, 388
DraIII CACNNNGTG 1 cut(s) 426
Eam1104I CTCTTC 2 cut(s) 13, 441
EarI CTCTTC 2 cut(s) 13, 441
Eco24I GRGCYC 1 cut(s) 434
Eco57I CTGAAG 2 cut(s) 335, 422
EcoO109I RGGNCCY 2 cut(s) 430, 431
EcoRII CCWGG 2 cut(s) 151, 159
EcoT38I GRGCYC 1 cut(s) 434
Esp3I CGTCTC 1 cut(s) 265
FaeI CATG 3 cut(s) 68, 102, 352
FaiI YATR 8 cut(s) 66, 100, 167, 197, 266, 341, 350, 404
FaqI GGGAC 1 cut(s) 85
FatI CATG 3 cut(s) 64, 98, 348
Fnu4HI GCNGC 1 cut(s) 399
FokI GGATG 2 cut(s) 21, 39
FriOI GRGCYC 1 cut(s) 434
Fsp4HI GCNGC 1 cut(s) 399
GluI GCNGC 1 cut(s) 399
HaeIII GGCC 1 cut(s) 432
HgaI GACGC 1 cut(s) 343
Hin1II CATG 3 cut(s) 68, 102, 352
HinfI GANTC 2 cut(s) 61, 156
HphI GGTGA 1 cut(s) 164
Hpy166II GTNNAC 2 cut(s) 134, 146
Hpy188I TCNGA 3 cut(s) 255, 388, 441
Hpy188III TCNNGA 2 cut(s) 307, 349
Hpy8I GTNNAC 2 cut(s) 134, 146
HpyAV CCTTC 1 cut(s) 238
HpyCH4V TGCA 1 cut(s) 129
HpyF10VI GCNNNNNNNGC 1 cut(s) 407
HpyF3I CTNAG 1 cut(s) 252
Hsp92II CATG 3 cut(s) 68, 102, 352
Kzo9I GATC 2 cut(s) 373, 388
LpnPI CCDG 9 cut(s) 31, 93, 138, 146, 165, 173, 175, 292, 408
Lsp1109I GCAGC 1 cut(s) 385
MalI GATC 2 cut(s) 375, 390
MboI GATC 2 cut(s) 373, 388
MboII GAAGA 7 cut(s) 30, 61, 88, 125, 128, 288, 428
MflI RGATCY 1 cut(s) 388
MhlI GDGCHC 1 cut(s) 434
MluCI AATT 1 cut(s) 32
MnlI CCTC 3 cut(s) 14, 100, 444
MseI TTAA 1 cut(s) 239
MspR9I CCNGG 2 cut(s) 153, 161
MvaI CCWGG 2 cut(s) 153, 161
MwoI GCNNNNNNNGC 1 cut(s) 407
NdeII GATC 2 cut(s) 373, 388
NlaIII CATG 3 cut(s) 68, 102, 352
NlaIV GGNNCC 2 cut(s) 431, 432
PagI TCATGA 1 cut(s) 348
PfeI GAWTC 2 cut(s) 61, 156
PflMI CCANNNNNTGG 1 cut(s) 426
PfoI TCCNGGA 1 cut(s) 159
PkrI GCNGC 1 cut(s) 400
Psp6I CCWGG 2 cut(s) 151, 159
PspGI CCWGG 2 cut(s) 151, 159
PspN4I GGNNCC 2 cut(s) 431, 432
PspOMI GGGCCC 1 cut(s) 430
PspPI GGNCC 2 cut(s) 430, 431
PsuI RGATCY 1 cut(s) 388
SaqAI TTAA 1 cut(s) 239
SatI GCNGC 1 cut(s) 399
Sau3AI GATC 2 cut(s) 373, 388
Sau96I GGNCC 2 cut(s) 430, 431
ScrFI CCNGG 2 cut(s) 153, 161
SduI GDGCHC 1 cut(s) 434
SetI ASST 5 cut(s) 25, 92, 154, 172, 300
SmlI CTYRAG 1 cut(s) 299
SmoI CTYRAG 1 cut(s) 299
Sse9I AATT 1 cut(s) 32
SsiI CCGC 1 cut(s) 268
StyD4I CCNGG 2 cut(s) 151, 159
TasI AATT 1 cut(s) 32
TfiI GAWTC 2 cut(s) 61, 156
Tru1I TTAA 1 cut(s) 239
Tru9I TTAA 1 cut(s) 239
TscAI CASTG 1 cut(s) 50
TseI GCWGC 1 cut(s) 398
TspGWI ACGGA 1 cut(s) 213
TspRI CASTG 1 cut(s) 50
Van91I CCANNNNNTGG 1 cut(s) 426
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.