Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0001535

Physical Location & Seq

Genomic Coordinates Reverse (-)

25762192 .. 25767658

Gene Structure 5467 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0241400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

ATGCTTAGGAACTTGATTCGTTTCCCTGAATCGCTGCAGACAGACAACTCAATTCACATCTTGGGTATGTCTTCTTCATGGATTCGTTCACTTTCAGCTCAGAAGAGGAAGTTTGGTTATGGCCTCCTTCATAATCCGCTTAAGAGTTCGACAAACTCAATCCCCCAGTTTTGCATACAAAGACACAGAGACCTGACTAGCATTCGATCTTTTTGTACCAGTCGCATTGGAATACCGTCTTTGAGTTGGATTCATCAGGCTACGGGAGCGCAACTTTGCACGCTAACTGATGTTGAACCGTCTGATACCGATTCTTGCAGTGATGCAGGTGCTCGTGTTGTTGAGGTGTCGCGTGATGATTCGGATGATAATGTTGCAACAAAGGAAGTTAGGGTTAGGTATGAAAAGCCAGTAGATTTCACCAAAGTGAAGAAGAATCTGCTTCCGACTGTGATTCTTGTTGGCCGCCCGAATGTGGGCAAGTCAGCTTTGTTCAATCGTTTGATCCGGAGGCGGGAGGCCCTTGTGTACAACACACCAGATGATCATGTTACTCGTGACTTCAGAGATGGCGTTGCTAAATTGGGTGATCTACGATTCAGAGTATTGGACTCGGCTGGCTTAGAAACAGCAGCTTCTTCGGGTTCTATTCTTGACAGAACAGCAGGGATGACTGCAAGTATATTGGCAAGGTCTCAGTTTGCGGTTTTCCTTATAGATGTGAGAGCTGGACTGCACCCACTTGATCTGGAGGTTGGAAGGTGGTTGCGCAAGCATGCACCTGGAATCAATATTGTAGTTGCCATGAATAAATCAGAGTCACTTTTTGATGGTAGTGGTTCTCTTGCTGCGGCTGCTGCTGAAGCTTATAGGTTGGGATGGGGTGACCCTATTGCCATTTCAGCTGAAACTGGACTCGGTATGCAAGATCTTTATGGGAGTCTAAAGCCTATGCTTGAGGATTATATGCTCAGTGTCTTAAACAATCAAGAAAACACTGATGAGGGAAATTTCAGCGACGACAGCTCCTGTGAGATTGAGGATAGTAAGCTGCCGTTACAGTTAGCAATCGTAGGAAAACCCAATGTTGGGAAGTCAACATTGCTGAATACATTGTTACAAGAAGAACGTGTGCTGGTAGGTCCGGAAGCTGGTCTGACAAGAGATTCAATTAGAGCTGAGTTTGAATTTCAAGGGAGAACTATCTACCTGGTTGACACTGCAGGCTGGTTGCAGAGAACAAAGATGGAGAAAGGACCATCATCCTTGAGCATTGTGCAGTCAAGAAAGAGTCTCATGAGAGCTCATGTGGTTGCTCTGGTCCTGGATGCCGAAGAGATCTCAAAGGCCAGAAGAAGTATGAAGCATGATGAAGTAGTTATAGCTAGACAGGCTATTGAAGAAGGGCGTGGTTTAGTGGTGGTTGTGAACAAGATGGATCTATTAAAAGAACAAGAAATTTGTGACAAGGTTATGGAAGCTGTGCCTCAAGAAATTCAGACGGTTATACCCCAGGTGACTGGAATACCAGTAGTATTCATATCAGCATTGGAAGGAAGGGGTCAGGCAGCTGTCATGCACCAAGTTATTGATACATATGAAAAATGGTGTTCAAGGTTGTCCACAGCTCGTCTGAACCGTTGGTTGCGCAAGGTTATGAGCAGGCATTCTTGGAAAGATCAGTCTGCTCAACCCAAGGTCAAGTACTTTACACAGGTGAAAGCACGACCACCCACTTTTGTGGCCTTTGTTAGTGGGAAGAAAGAGCTCTCAGATACAGACATCAGGTTCTTAAAAAGGTCTTTGAAGGAAGACTTTGATTTGGGTGGAATTCCGATCAGGATCATGCAGAGGAACGTCCCACGGAAGGCTGCCAATGGCAATAGCAAGAGCGGCCAATTTACTAATAGAATGCCTGATAGGATCTTCTCTGACAAGAGAACTGTATCCGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000723 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006355 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009888 GO:0009889 GO:0009987 GO:0010073 GO:0010449 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0031323 GO:0031326 GO:0032200 GO:0032501 GO:0032502 GO:0034641 GO:0035266 GO:0040007 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0048364 GO:0048507 GO:0048589 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060249 GO:0060255 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0098727 GO:0099402 GO:0140110 GO:1901360 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

651

Amino Acids

72.43

Weight (kDa)

9.28

Isoelectric Point (pI)

43.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MMR_HSR1	PF01926	150 - 271	4.6e-17	50S ribosome-binding GTPase
FeoB_N	PF02421	354 - 528	4.8e-12	Ferrous iron transport protein B
AIG1	PF04548	354 - 522	1.1e-06	AIG1 family
MMR_HSR1	PF01926	355 - 478	3.6e-21	50S ribosome-binding GTPase
GTP_EFTU	PF00009	355 - 533	5.1e-09	Elongation factor Tu GTP binding domain
KH_dom-like	PF14714	539 - 618	2.9e-21	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001535)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28010
fragaria_vesca	FvH4_3g35120 FvH4_3g35120 FvH4_3g35120 FvH4_3g35120 FvH4_3g35120 FvH4_5g33200 FvH4_5g33200 FvH4_5g33200
malus_domestica	MD08G1215500.v1.1 MD15G1399800.v1.1 MD15G1400000.v1.1
prunus_persica	Prupe.1G547200_v2.0.a1 Prupe.1G547200_v2.0.a1 Prupe.1G547200_v2.0.a1 Prupe.1G547200_v2.0.a1 Prupe.1G547200_v2.0.a1 Prupe.1G547200_v2.0.a1 Prupe.1G547200_v2.0.a1 Prupe.1G547200_v2.0.a1 Prupe.1G547200_v2.0.a1 Prupe.1G547200_v2.0.a1 Prupe.1G547200_v2.0.a1 Prupe.1G547200_v2.0.a1
pyrus_communis	pycom08g18660 pycom15g35860
rosa_chinensis	RchiOBHm_Chr5g0048941 RchiOBHm_Chr7g0231581
rosa_laevigata	RLG00000001411 RLG00000001412 RLG00000034570
rosa_multiflora	Rmu_sc0007946.1_g000003
rosa_roxburghii	Rroxscaffold_1G00032970 Rroxscaffold_3G00229080
rosa_rugosa	Rorug05G0241400 Rorug07G0267200 Rorug07G0267300
rosa_samantha	Rh5AG321400 Rh5CG357100 Rh5DG343500 Rh7AG421600 Rh7AG421700 Rh7AG421900 Rh7BG396300 Rh7CG441900 Rh7CG442200 Rh7DG414300
rosa_wichuraiana	Rw5G030330 Rw7G034790 Rw7G034880 Rw7G034900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	317
Acc16I	TGCGCA	2 cut(s)	770, 1649
Acc36I	ACCTGC	1 cut(s)	317
AccBSI	CCGCTC	1 cut(s)	1893
AccII	CGCG	1 cut(s)	352
AccIII	TCCGGA	2 cut(s)	507, 1144
AciI	CCGC	6 cut(s)	137, 466, 514, 704, 851, 1893
AclWI	GGATC	4 cut(s)	499, 1446, 1850, 1931
AcoI	YGGCCR	2 cut(s)	463, 1894
AcsI	RAATTY	5 cut(s)	1009, 1187, 1458, 1494, 1830
AcuI	CTGAAG	2 cut(s)	547, 882
AfaI	GTAC	3 cut(s)	217, 530, 1706
AfiI	CCNNNNNNNGG	7 cut(s)	475, 476, 514, 1088, 1089, 1151, 1867
AflII	CTTAAG	1 cut(s)	140
AflIII	ACRYGT	1 cut(s)	1129
AgsI	TTSAA	8 cut(s)	296, 496, 1170, 1187, 1193, 1400, 1614, 1807
AjnI	CCWGG	4 cut(s)	781, 1209, 1323, 1512
AleI	CACNNNNGTG	2 cut(s)	425, 1739
Alw21I	GWGCWC	3 cut(s)	334, 1306, 1770
Alw26I	GTCTC	3 cut(s)	183, 699, 1298
AlwI	GGATC	4 cut(s)	499, 1446, 1850, 1931
AlwNI	CAGNNNCTG	1 cut(s)	1029
Aor13HI	TCCGGA	2 cut(s)	507, 1144
AoxI	GGCC	6 cut(s)	121, 463, 519, 1347, 1743, 1894
ApeKI	GCWGC	8 cut(s)	34, 632, 848, 854, 857, 1051, 1568, 1871
ApoI	RAATTY	5 cut(s)	1009, 1187, 1458, 1494, 1830
AspLEI	GCGC	3 cut(s)	271, 771, 1650
AspS9I	GGNCC	4 cut(s)	520, 1142, 1256, 1321
AsuHPI	GGTGA	5 cut(s)	412, 599, 896, 1528, 1729
AvaII	GGWCC	3 cut(s)	1142, 1256, 1321
BanII	GRGCYC	2 cut(s)	1306, 1770
BarI	GAAGNNNNNNTAC	2 cut(s)	58, 90
BauI	CACGAG	2 cut(s)	333, 555
BbsI	GAAGAC	2 cut(s)	63, 1818
Bbv12I	GWGCWC	3 cut(s)	334, 1306, 1770
BbvI	GCAGC	8 cut(s)	21, 644, 835, 841, 844, 1038, 1580, 1858
BccI	CCATC	6 cut(s)	563, 824, 873, 1240, 1267, 1429
BceAI	ACGGC	1 cut(s)	1039
BcgI	CGANNNNNNTGC	2 cut(s)	621, 655
BciT130I	CCWGG	4 cut(s)	783, 1211, 1325, 1514
BclI	TGATCA	1 cut(s)	544
BcoDI	GTCTC	3 cut(s)	183, 699, 1298
BfaI	CTAG	2 cut(s)	198, 1386
BfmI	CTRYAG	2 cut(s)	35, 1221
BfrI	CTTAAG	1 cut(s)	140
BfuAI	ACCTGC	1 cut(s)	317
BglII	AGATCT	2 cut(s)	928, 1338
BmcAI	AGTACT	1 cut(s)	1706
Bme1390I	CCNGG	4 cut(s)	783, 1211, 1325, 1514
Bme18I	GGWCC	3 cut(s)	1142, 1256, 1321
BmgT120I	GGNCC	4 cut(s)	520, 1142, 1256, 1321
BmrFI	CCNGG	4 cut(s)	783, 1211, 1325, 1514
BmrI	ACTGGG	1 cut(s)	160
BmsI	GCATC	2 cut(s)	313, 1318
BmuI	ACTGGG	1 cut(s)	160
BpiI	GAAGAC	2 cut(s)	63, 1818
BpmI	CTGGAG	1 cut(s)	770
Bpu10I	CCTNAGC	1 cut(s)	5
BpuEI	CTTGAG	3 cut(s)	977, 1288, 1473
BsaBI	GATNNNNATC	1 cut(s)	1841
BsaI	GGTCTC	2 cut(s)	183, 699
BsaJI	CCNNGG	3 cut(s)	1512, 1695, 1862
BsaWI	WCCGGW	2 cut(s)	507, 1144
BsaXI	ACNNNNNCTCC	2 cut(s)	1010, 1040
Bsc4I	CCNNNNNNNGG	7 cut(s)	475, 476, 514, 1088, 1089, 1151, 1867
Bse1I	ACTGG	6 cut(s)	166, 219, 410, 916, 1525, 1529
Bse3DI	GCAATG	1 cut(s)	1100
Bse8I	GATNNNNATC	1 cut(s)	1841
BseAI	TCCGGA	2 cut(s)	507, 1144
BseBI	CCWGG	4 cut(s)	783, 1211, 1325, 1514
BseDI	CCNNGG	3 cut(s)	1512, 1695, 1862
BseGI	GGATG	5 cut(s)	370, 675, 884, 1262, 1333
BseJI	GATNNNNATC	1 cut(s)	1841
BseLI	CCNNNNNNNGG	7 cut(s)	475, 476, 514, 1088, 1089, 1151, 1867
BseMI	GCAATG	1 cut(s)	1100
BseMII	CTCAG	5 cut(s)	113, 710, 985, 1170, 1785
BseNI	ACTGG	6 cut(s)	166, 219, 410, 916, 1525, 1529
BseXI	GCAGC	8 cut(s)	21, 644, 835, 841, 844, 1038, 1580, 1858
BsgI	GTGCAG	2 cut(s)	719, 1298
Bsh1236I	CGCG	1 cut(s)	352
BshFI	GGCC	6 cut(s)	123, 465, 521, 1349, 1745, 1896
BsiHKAI	GWGCWC	3 cut(s)	334, 1306, 1770
BsiSI	CCGG	2 cut(s)	508, 1145
BslFI	GGGAC	1 cut(s)	1844
BslI	CCNNNNNNNGG	7 cut(s)	475, 476, 514, 1088, 1089, 1151, 1867
BsmAI	GTCTC	3 cut(s)	183, 699, 1298
BsmFI	GGGAC	1 cut(s)	1844
BsmI	GAATGC	3 cut(s)	201, 1666, 1917
BsnI	GGCC	6 cut(s)	123, 465, 521, 1349, 1745, 1896
Bso31I	GGTCTC	2 cut(s)	183, 699
Bsp1286I	GDGCHC	3 cut(s)	334, 1306, 1770
Bsp13I	TCCGGA	2 cut(s)	507, 1144
Bsp1407I	TGTACA	1 cut(s)	528
BspACI	CCGC	6 cut(s)	137, 466, 514, 704, 851, 1893
BspANI	GGCC	6 cut(s)	123, 465, 521, 1349, 1745, 1896
BspCNI	CTCAG	5 cut(s)	112, 709, 984, 1171, 1784
BspEI	TCCGGA	2 cut(s)	507, 1144
BspFNI	CGCG	1 cut(s)	352
BspHI	TCATGA	1 cut(s)	1296
BspMAI	CTGCAG	2 cut(s)	39, 1225
BspMI	ACCTGC	1 cut(s)	317
BspPI	GGATC	4 cut(s)	499, 1446, 1850, 1931
BspTI	CTTAAG	1 cut(s)	140
BspTNI	GGTCTC	2 cut(s)	183, 699
BsrBI	CCGCTC	1 cut(s)	1893
BsrDI	GCAATG	1 cut(s)	1100
BsrGI	TGTACA	1 cut(s)	528
BsrI	ACTGG	6 cut(s)	166, 219, 410, 916, 1525, 1529
BssECI	CCNNGG	3 cut(s)	1512, 1695, 1862
BssSI	CACGAG	2 cut(s)	333, 555
BssT1I	CCWWGG	1 cut(s)	1695
Bst2BI	CACGAG	2 cut(s)	333, 555
Bst2UI	CCWGG	4 cut(s)	783, 1211, 1325, 1514
Bst4CI	ACNGT	7 cut(s)	237, 300, 451, 1062, 1504, 1640, 1945
Bst6I	CTCTTC	2 cut(s)	98, 1329
BstAFI	CTTAAG	1 cut(s)	140
BstAUI	TGTACA	1 cut(s)	528
BstC8I	GCNNGC	6 cut(s)	281, 619, 773, 777, 1225, 1664
BstDEI	CTNAG	7 cut(s)	5, 99, 622, 696, 971, 1179, 1771
BstDSI	CCRYGG	1 cut(s)	1862
BstEII	GGTNACC	1 cut(s)	884
BstF5I	GGATG	5 cut(s)	370, 675, 884, 1262, 1333
BstFNI	CGCG	1 cut(s)	352
BstHHI	GCGC	3 cut(s)	271, 771, 1650
BstMAI	GTCTC	3 cut(s)	183, 699, 1298
BstMWI	GCNNNNNNNGC	8 cut(s)	266, 854, 857, 863, 902, 1023, 1391, 1893
BstNI	CCWGG	4 cut(s)	783, 1211, 1325, 1514
BstNSI	RCATGY	1 cut(s)	779
BstPI	GGTNACC	1 cut(s)	884
BstSCI	CCNGG	4 cut(s)	781, 1209, 1323, 1512
BstSFI	CTRYAG	2 cut(s)	35, 1221
BstUI	CGCG	1 cut(s)	352
BstV1I	GCAGC	8 cut(s)	21, 644, 835, 841, 844, 1038, 1580, 1858
BstV2I	GAAGAC	2 cut(s)	63, 1818
BstX2I	RGATCY	4 cut(s)	928, 1338, 1438, 1923
BstXI	CCANNNNNNTGG	2 cut(s)	1520, 1741
BstYI	RGATCY	4 cut(s)	928, 1338, 1438, 1923
BsuRI	GGCC	6 cut(s)	123, 465, 521, 1349, 1745, 1896
BtgI	CCRYGG	1 cut(s)	1862
BtsCI	GGATG	5 cut(s)	370, 675, 884, 1262, 1333
BtsI	GCAGTG	2 cut(s)	325, 1218
BtsIMutI	CAGTG	4 cut(s)	325, 979, 996, 1218
BveI	ACCTGC	1 cut(s)	317
Cac8I	GCNNGC	6 cut(s)	281, 619, 773, 777, 1225, 1664
CaiI	CAGNNNCTG	1 cut(s)	1029
CciI	TCATGA	1 cut(s)	1296
CfoI	GCGC	3 cut(s)	271, 771, 1650
Cfr13I	GGNCC	4 cut(s)	520, 1142, 1256, 1321
CsiI	ACCWGGT	1 cut(s)	1209
Csp6I	GTAC	3 cut(s)	216, 529, 1705
CviAII	CATG	9 cut(s)	78, 548, 776, 805, 1297, 1307, 1367, 1576, 1846
CviQI	GTAC	3 cut(s)	216, 529, 1705
DdeI	CTNAG	7 cut(s)	5, 99, 622, 696, 971, 1179, 1771
EaeI	YGGCCR	2 cut(s)	463, 1894
Eam1104I	CTCTTC	2 cut(s)	98, 1329
EarI	CTCTTC	2 cut(s)	98, 1329
Ecl136II	GAGCTC	2 cut(s)	1304, 1768
Eco130I	CCWWGG	1 cut(s)	1695
Eco24I	GRGCYC	2 cut(s)	1306, 1770
Eco31I	GGTCTC	2 cut(s)	183, 699
Eco47I	GGWCC	3 cut(s)	1142, 1256, 1321
Eco53kI	GAGCTC	2 cut(s)	1304, 1768
Eco57I	CTGAAG	2 cut(s)	547, 882
Eco91I	GGTNACC	1 cut(s)	884
EcoICRI	GAGCTC	2 cut(s)	1304, 1768
EcoO109I	RGGNCCY	1 cut(s)	520
EcoO65I	GGTNACC	1 cut(s)	884
EcoRI	GAATTC	1 cut(s)	1830
EcoRII	CCWGG	4 cut(s)	781, 1209, 1323, 1512
EcoT14I	CCWWGG	1 cut(s)	1695
EcoT38I	GRGCYC	2 cut(s)	1306, 1770
ErhI	CCWWGG	1 cut(s)	1695
FaeI	CATG	9 cut(s)	81, 551, 779, 808, 1300, 1310, 1370, 1579, 1849
FalI	AAGNNNNNCTT	2 cut(s)	1799, 1831
FaqI	GGGAC	1 cut(s)	1844
FatI	CATG	9 cut(s)	77, 547, 775, 804, 1296, 1306, 1366, 1575, 1845
FauI	CCCGC	1 cut(s)	507
FauNDI	CATATG	1 cut(s)	1597
FbaI	TGATCA	1 cut(s)	544
FokI	GGATG	5 cut(s)	377, 682, 891, 1249, 1340
FriOI	GRGCYC	2 cut(s)	1306, 1770
FspBI	CTAG	2 cut(s)	198, 1386
FspI	TGCGCA	2 cut(s)	770, 1649
GlaI	GCGC	3 cut(s)	270, 770, 1649
GsuI	CTGGAG	1 cut(s)	770
HaeIII	GGCC	6 cut(s)	123, 465, 521, 1349, 1745, 1896
HapII	CCGG	2 cut(s)	508, 1145
HhaI	GCGC	3 cut(s)	271, 771, 1650
Hin1II	CATG	9 cut(s)	81, 551, 779, 808, 1300, 1310, 1370, 1579, 1849
Hin6I	GCGC	3 cut(s)	269, 769, 1648
HinP1I	GCGC	3 cut(s)	269, 769, 1648
HincII	GTYRAC	2 cut(s)	1098, 1216
HindII	GTYRAC	2 cut(s)	1098, 1216
HindIII	AAGCTT	1 cut(s)	864
HpaII	CCGG	2 cut(s)	508, 1145
HphI	GGTGA	5 cut(s)	412, 599, 896, 1528, 1729
Hpy166II	GTNNAC	6 cut(s)	89, 529, 1098, 1216, 1429, 1623
Hpy8I	GTNNAC	6 cut(s)	89, 529, 1098, 1216, 1429, 1623
Hpy99I	CGWCG	1 cut(s)	1022
HpyAV	CCTTC	7 cut(s)	137, 753, 1397, 1547, 1551, 1801, 1861
HpyCH4III	ACNGT	7 cut(s)	237, 300, 451, 1062, 1504, 1640, 1945
HpyCH4IV	ACGT	2 cut(s)	1129, 1857
HpyF10VI	GCNNNNNNNGC	8 cut(s)	266, 854, 857, 863, 902, 1023, 1391, 1893
HpyF3I	CTNAG	7 cut(s)	5, 99, 622, 696, 971, 1179, 1771
HpySE526I	ACGT	2 cut(s)	1129, 1857
Hsp92II	CATG	9 cut(s)	81, 551, 779, 808, 1300, 1310, 1370, 1579, 1849
HspAI	GCGC	3 cut(s)	269, 769, 1648
Kpn2I	TCCGGA	2 cut(s)	507, 1144
Ksp22I	TGATCA	1 cut(s)	544
LmnI	GCTCC	2 cut(s)	266, 1031
Lsp1109I	GCAGC	8 cut(s)	21, 644, 835, 841, 844, 1038, 1580, 1858
LweI	GCATC	2 cut(s)	313, 1318
MabI	ACCWGGT	1 cut(s)	1209
MaeI	CTAG	2 cut(s)	198, 1386
MaeII	ACGT	2 cut(s)	1129, 1857
MaeIII	GTNAC	8 cut(s)	550, 557, 819, 884, 1056, 1116, 1463, 1516
MbiI	CCGCTC	1 cut(s)	1893
MflI	RGATCY	4 cut(s)	928, 1338, 1438, 1923
MhlI	GDGCHC	3 cut(s)	334, 1306, 1770
MluCI	AATT	9 cut(s)	51, 581, 1009, 1170, 1187, 1458, 1494, 1830, 1898
MlyI	GAGTC	5 cut(s)	605, 827, 909, 949, 1300
MmeI	TCCRAC	3 cut(s)	227, 470, 736
MroI	TCCGGA	2 cut(s)	507, 1144
MseI	TTAA	4 cut(s)	141, 980, 1445, 1793
MslI	CAYNNNNRTG	2 cut(s)	425, 1739
MspA1I	CMGCKG	2 cut(s)	905, 1571
MspCI	CTTAAG	1 cut(s)	140
MspI	CCGG	2 cut(s)	508, 1145
MspR9I	CCNGG	4 cut(s)	783, 1211, 1325, 1514
Mva1269I	GAATGC	3 cut(s)	201, 1666, 1917
MvaI	CCWGG	4 cut(s)	783, 1211, 1325, 1514
MvnI	CGCG	1 cut(s)	352
MwoI	GCNNNNNNNGC	8 cut(s)	266, 854, 857, 863, 902, 1023, 1391, 1893
NdeI	CATATG	1 cut(s)	1597
NlaIII	CATG	9 cut(s)	81, 551, 779, 808, 1300, 1310, 1370, 1579, 1849
NmeAIII	GCCGAG	1 cut(s)	593
NmuCI	GTSAC	5 cut(s)	557, 819, 884, 1463, 1516
NsbI	TGCGCA	2 cut(s)	770, 1649
NspI	RCATGY	1 cut(s)	779
OliI	CACNNNNGTG	2 cut(s)	425, 1739
PaeI	GCATGC	1 cut(s)	779
PagI	TCATGA	1 cut(s)	1296
PaqCI	CACCTGC	1 cut(s)	317
PcsI	WCGNNNNNNNCGW	1 cut(s)	1636
PctI	GAATGC	3 cut(s)	201, 1666, 1917
PfoI	TCCNGGA	1 cut(s)	1323
PleI	GAGTC	5 cut(s)	605, 826, 909, 948, 1299
PpsI	GAGTC	5 cut(s)	605, 826, 909, 948, 1299
Psp124BI	GAGCTC	2 cut(s)	1306, 1770
Psp6I	CCWGG	4 cut(s)	781, 1209, 1323, 1512
PspEI	GGTNACC	1 cut(s)	884
PspGI	CCWGG	4 cut(s)	781, 1209, 1323, 1512
PspPI	GGNCC	4 cut(s)	520, 1142, 1256, 1321
PstI	CTGCAG	2 cut(s)	39, 1225
PstNI	CAGNNNCTG	1 cut(s)	1029
PsuI	RGATCY	4 cut(s)	928, 1338, 1438, 1923
PvuII	CAGCTG	2 cut(s)	905, 1571
RsaI	GTAC	3 cut(s)	217, 530, 1706
RsaNI	GTAC	3 cut(s)	216, 529, 1705
RseI	CAYNNNNRTG	2 cut(s)	425, 1739
SacI	GAGCTC	2 cut(s)	1306, 1770
SaqAI	TTAA	4 cut(s)	141, 980, 1445, 1793
Sau96I	GGNCC	4 cut(s)	520, 1142, 1256, 1321
ScaI	AGTACT	1 cut(s)	1706
SchI	GAGTC	5 cut(s)	605, 827, 909, 949, 1300
ScrFI	CCNGG	4 cut(s)	783, 1211, 1325, 1514
SduI	GDGCHC	3 cut(s)	334, 1306, 1770
SexAI	ACCWGGT	1 cut(s)	1209
SfaNI	GCATC	2 cut(s)	313, 1318
SfcI	CTRYAG	2 cut(s)	35, 1221
SinI	GGWCC	3 cut(s)	1142, 1256, 1321
SmiMI	CAYNNNNRTG	2 cut(s)	425, 1739
SmlI	CTYRAG	4 cut(s)	140, 956, 1267, 1488
SmoI	CTYRAG	4 cut(s)	140, 956, 1267, 1488
SphI	GCATGC	1 cut(s)	779
Sse9I	AATT	9 cut(s)	51, 581, 1009, 1170, 1187, 1458, 1494, 1830, 1898
SsiI	CCGC	6 cut(s)	137, 466, 514, 704, 851, 1893
SspI	AATATT	1 cut(s)	793
SspMI	CTAG	2 cut(s)	198, 1386
SstI	GAGCTC	2 cut(s)	1306, 1770
StyD4I	CCNGG	4 cut(s)	781, 1209, 1323, 1512
StyI	CCWWGG	1 cut(s)	1695
TaaI	ACNGT	7 cut(s)	237, 300, 451, 1062, 1504, 1640, 1945
TaiI	ACGT	2 cut(s)	1132, 1860
TaqI	TCGA	2 cut(s)	149, 205
TasI	AATT	9 cut(s)	51, 581, 1009, 1170, 1187, 1458, 1494, 1830, 1898
TatI	WGTACW	2 cut(s)	528, 1704
TauI	GCSGC	3 cut(s)	468, 854, 1896
Tru1I	TTAA	4 cut(s)	141, 980, 1445, 1793
Tru9I	TTAA	4 cut(s)	141, 980, 1445, 1793
TscAI	CASTG	4 cut(s)	325, 979, 1003, 1225
TseFI	GTSAC	5 cut(s)	557, 819, 884, 1463, 1516
TseI	GCWGC	8 cut(s)	34, 632, 848, 854, 857, 1051, 1568, 1871
Tsp45I	GTSAC	5 cut(s)	557, 819, 884, 1463, 1516
TspDTI	ATGAA	9 cut(s)	66, 119, 242, 417, 821, 1376, 1386, 1528, 1614
TspGWI	ACGGA	2 cut(s)	1879, 1939
TspRI	CASTG	4 cut(s)	325, 979, 1003, 1225
Vha464I	CTTAAG	1 cut(s)	140
VpaK11BI	GGWCC	3 cut(s)	1142, 1256, 1321
XapI	RAATTY	5 cut(s)	1009, 1187, 1458, 1494, 1830
XceI	RCATGY	1 cut(s)	779
XspI	CTAG	2 cut(s)	198, 1386
ZrmI	AGTACT	1 cut(s)	1706

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.