Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0001535

Physical Location & Seq

Genomic Coordinates Reverse (-)

30311728 .. 30315358

Gene Structure 3631 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g35120.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ATGCGGTCATTACAGATATCTAAGACACGGCTCTTCTCCTCGCTGTCATCTGTTACTTGTCTATCTGATATGGAAACACGATTGAGGGCTTTTTGGAAGGACCCGGATCCTAAAATTTCAGAGGCGCTTTCGCTTTTTCATCATGCCGTACATTCCAACCGCCTGCCTTCGGGGTCAGCCTCAGCCTGCAACTTCCTTGTGGACACTCTGACAAGGTCAAAGAATTATGAACTATCATTCTCAGTTTATCATAAGATGACCAAGGGTAGAGTGGATGAGGCGATGGGTTTCTTGGAGGAGATGAGGCAAAAGGGTTTGGAAATGGATGTTTTTGTTTATGGTGCCCTTATAAGTGGTTTTTGTGCTAAAGGGAGTTTTGACAGAGGAAAACAACTGTTTGATGAGATGTTAAACAAGGGTATTTCTCCTAATGTGGTTACATATAGTTGTTTGATAAATACTTTGTCTAAGACTGGGAAGTGGAAAGAAGTCACTAGGATGGTAACTGATATGACACAACGTGGAGTTCCCCCTGATGTTGTTACTTACACAAGTATTTTTGATGGGCTTTTCAAAAATGGAATGGCTACAAAAGCCATGGAGATATTCAATTTAATACTATCGAAGGGTACGGAGCCTAATAATGTAATGTACAACGTTATAATTGATGGATTATGCAAGGAGGGGTTGGTGGATGATGCTTTAAAGATCTTAGAAACGATGAAAGGGAAAGGTGTAAAACCTGATGTAATCACTTACAACACATTACTAATGGGACTGTCCTCTGACGGGAAGGCTGATGAGGCGATGAAACTTTTCAGTAAGATGACAAATGATGAGAACTTTGTTGAGCCAGATGTTATGACATATAACATGCTTATTTTGGGACTGTGCAAGGAAGGTAATCTTGATCAGGCTATGGAGATGTATCATGCAATGATTGAAAGAGGCATTTCTGGTAGCTTTGGTACTTATAACACTTTGATCGACAGATGCTTACAGGAAGGCTTAGTTGACAAGGCCATAGAATTCTGGAGACATGCAGTTGACTTGGGAGTTATACCTAACTCAATCACTTATGGTGTCTTGATCAATGGATTTTCCAAAAATCAAATGGTCAGGGTTGCAAAAGGACTTTTTAGTAAAATGAGAGCTTCTGGAGTTAGTCCCACTGTAATTGACTACAACGTTCTAATGTCATCGATGTGCAAGGAGGGTAGTTTGGAGCAAGCTAGGATGTTGTTTCAAGAAATGAGAACTGCAAATCATTCGCCTTGTGTTTTCTCATTTAATACCATAATTGACGGAGTTCTGAAAGCTGGAGATATTAAATCTGCTAAAGAGTTTCTAGATGATATGCTCAAATTGGGTTTAGTTCCCAATAGAATTACCTTCTCTATGTTGGTAAACCGGTTTTCAAAACTTGGGCTCATGGATGAGGCTAGAATGTGCGTTGAGAAGATGACTGCTCGCGGTATTGAACCTGATGTCTTTGTGTACGATTCTTTGTTAAAGGGCTATAGTTCTAACGGTGGAACAGAAGAAATTGTTGATATGCTTCATCAGATGGCAGACAAGGGTGTTGTTCTGGACAAATATATAACTTCTACCATCTTAGCGTGCCTCTGTCAAATCTCTGATGACGTTGATGTGATGGAGGTTCTCCCAACTTTTTCAAAAGATACATCGAAAGAATTAAGCATTACCTGCAATGAGCTATTGATGAAAGTCAATAAATCTTATCCGGAACTTAAGTTATGTGCTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

590

Amino Acids

65.6

Weight (kDa)

5.9

Isoelectric Point (pI)

23.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	141 - 189	5.1e-10	PPR repeat family
PPR_1	PF12854	174 - 203	1.9e-08	PPR repeat
PPR_2	PF13041	175 - 224	4.3e-17	PPR repeat family
PPR_1	PF12854	207 - 239	9.1e-17	PPR repeat
PPR_2	PF13041	210 - 258	1.7e-16	PPR repeat family
PPR	PF01535	213 - 243	2.8e-10	PPR repeat
PPR_3	PF13812	235 - 292	4.7e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	241 - 273	3.5e-08	PPR repeat
PPR_2	PF13041	246 - 294	1.6e-14	PPR repeat family
PPR	PF01535	249 - 278	7.9e-06	PPR repeat
PPR_long	PF17177	262 - 352	8.4e-08	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	280 - 329	3.6e-15	PPR repeat family
PPR_3	PF13812	304 - 360	4.6e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	311 - 341	2.7e-06	PPR repeat
PPR_2	PF13041	315 - 364	1.2e-13	PPR repeat family
TPR_24	PF23276	330 - 449	3.5e-11	Fungal tetratrico peptide repeats
PPR_long	PF17177	333 - 423	5.4e-07	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	346 - 379	8.6e-12	PPR repeat
PPR_2	PF13041	350 - 398	6.1e-17	PPR repeat family
PPR	PF01535	353 - 383	2.9e-08	PPR repeat
PPR_3	PF13812	373 - 431	4.3e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	381 - 414	1.6e-11	PPR repeat
PPR_2	PF13041	385 - 415	3.1e-07	PPR repeat family
PPR	PF01535	388 - 414	2.4e-06	PPR repeat
PPR_1	PF12854	420 - 450	9.3e-11	PPR repeat
PPR_3	PF13812	420 - 469	2.9e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	422 - 456	3.1e-09	PPR repeat family
PPR	PF01535	426 - 455	3.7e-07	PPR repeat
PPR_long	PF17177	435 - 557	7.2e-07	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	461 - 506	5.6e-11	PPR repeat family
PPR_3	PF13812	484 - 539	6.6e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	492 - 530	8.9e-07	PPR repeat family
PPR_1	PF12854	524 - 556	6.5e-08	PPR repeat
PPR_2	PF13041	527 - 562	3.1e-06	PPR repeat family
PPR_long	PF17177	544 - 663	9.1e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	551 - 609	6.8e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	562 - 611	3.2e-12	PPR repeat family
PPR_2	PF13041	632 - 681	1.5e-06	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0001535)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28010
fragaria_vesca	FvH4_3g35120 FvH4_3g35120 FvH4_3g35120 FvH4_3g35120 FvH4_3g35120 FvH4_5g33200 FvH4_5g33200 FvH4_5g33200
malus_domestica	MD08G1215500.v1.1 MD15G1399800.v1.1 MD15G1400000.v1.1
prunus_persica	Prupe.1G547200_v2.0.a1 Prupe.1G547200_v2.0.a1 Prupe.1G547200_v2.0.a1 Prupe.1G547200_v2.0.a1 Prupe.1G547200_v2.0.a1 Prupe.1G547200_v2.0.a1 Prupe.1G547200_v2.0.a1 Prupe.1G547200_v2.0.a1 Prupe.1G547200_v2.0.a1 Prupe.1G547200_v2.0.a1 Prupe.1G547200_v2.0.a1 Prupe.1G547200_v2.0.a1
pyrus_communis	pycom08g18660 pycom15g35860
rosa_chinensis	RchiOBHm_Chr5g0048941 RchiOBHm_Chr7g0231581
rosa_laevigata	RLG00000001411 RLG00000001412 RLG00000034570
rosa_multiflora	Rmu_sc0007946.1_g000003
rosa_roxburghii	Rroxscaffold_1G00032970 Rroxscaffold_3G00229080
rosa_rugosa	Rorug05G0241400 Rorug07G0267200 Rorug07G0267300
rosa_samantha	Rh5AG321400 Rh5CG357100 Rh5DG343500 Rh7AG421600 Rh7AG421700 Rh7AG421900 Rh7BG396300 Rh7CG441900 Rh7CG442200 Rh7DG414300
rosa_wichuraiana	Rw5G030330 Rw7G034790 Rw7G034880 Rw7G034900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	350, 662, 975
Acc36I	ACCTGC	1 cut(s)	1715
AccB1I	GGYRCC	1 cut(s)	341
AccII	CGCG	1 cut(s)	1473
AccIII	TCCGGA	1 cut(s)	1744
AciI	CCGC	3 cut(s)	4, 160, 1473
AclI	AACGTT	2 cut(s)	657, 1188
AclWI	GGATC	2 cut(s)	101, 114
AcsI	RAATTY	2 cut(s)	114, 1028
AdeI	CACNNNGTG	1 cut(s)	521
AfaI	GTAC	5 cut(s)	150, 631, 653, 970, 1499
AfiI	CCNNNNNNNGG	2 cut(s)	169, 789
AflII	CTTAAG	1 cut(s)	1751
AgeI	ACCGGT	1 cut(s)	1410
AgsI	TTSAA	7 cut(s)	574, 610, 944, 1247, 1419, 1481, 1677
AluBI	AGCT	5 cut(s)	963, 1154, 1232, 1319, 1717
AluI	AGCT	5 cut(s)	963, 1154, 1232, 1319, 1717
Alw26I	GTCTC	1 cut(s)	1030
AlwI	GGATC	2 cut(s)	101, 114
Aor13HI	TCCGGA	1 cut(s)	1744
AoxI	GGCC	1 cut(s)	1020
ApeKI	GCWGC	1 cut(s)	1763
ApoI	RAATTY	2 cut(s)	114, 1028
AsiGI	ACCGGT	1 cut(s)	1410
Asp700I	GAANNNNTTC	1 cut(s)	815
AspLEI	GCGC	1 cut(s)	127
AspS9I	GGNCC	1 cut(s)	100
AsuC2I	CCSGG	1 cut(s)	104
AvaII	GGWCC	1 cut(s)	100
BaeGI	GKGCMC	1 cut(s)	346
BamHI	GGATCC	1 cut(s)	106
BanI	GGYRCC	1 cut(s)	341
BanII	GRGCYC	1 cut(s)	1431
BbvCI	CCTCAGC	1 cut(s)	181
BbvI	GCAGC	1 cut(s)	1750
BccI	CCATC	7 cut(s)	277, 493, 557, 662, 1561, 1619, 1648
BceAI	ACGGC	2 cut(s)	44, 131
BcgI	CGANNNNNNTGC	2 cut(s)	1251, 1285
BclI	TGATCA	2 cut(s)	910, 1089
BcnI	CCSGG	1 cut(s)	104
BcoDI	GTCTC	1 cut(s)	1030
BfaI	CTAG	4 cut(s)	495, 1233, 1349, 1443
BfmI	CTRYAG	1 cut(s)	1519
BfoI	RGCGCY	1 cut(s)	128
BfrI	CTTAAG	1 cut(s)	1751
BfuAI	ACCTGC	1 cut(s)	1715
BglII	AGATCT	1 cut(s)	708
BisI	GCNGC	1 cut(s)	1764
BlsI	GCNGC	1 cut(s)	1765
Bme1390I	CCNGG	1 cut(s)	104
Bme18I	GGWCC	1 cut(s)	100
BmgT120I	GGNCC	1 cut(s)	100
BmiI	GGNNCC	4 cut(s)	102, 108, 343, 636
BmrFI	CCNGG	1 cut(s)	104
BmrI	ACTGGG	1 cut(s)	483
BmsI	GCATC	2 cut(s)	688, 983
BmuI	ACTGGG	1 cut(s)	483
BpmI	CTGGAG	3 cut(s)	1054, 1179, 1341
Bpu10I	CCTNAGC	1 cut(s)	181
BpuMI	CCSGG	1 cut(s)	104
Bsa29I	ATCGAT	1 cut(s)	1202
BsaJI	CCNNGG	2 cut(s)	261, 597
BsaWI	WCCGGW	2 cut(s)	1410, 1744
Bsc4I	CCNNNNNNNGG	2 cut(s)	169, 789
Bse118I	RCCGGY	1 cut(s)	1410
Bse1I	ACTGG	1 cut(s)	478
Bse3DI	GCAATG	2 cut(s)	942, 1717
BseAI	TCCGGA	1 cut(s)	1744
BseCI	ATCGAT	1 cut(s)	1202
BseDI	CCNNGG	2 cut(s)	261, 597
BseGI	GGATG	6 cut(s)	280, 331, 504, 700, 1242, 1441
BseLI	CCNNNNNNNGG	2 cut(s)	169, 789
BseMI	GCAATG	2 cut(s)	942, 1717
BseMII	CTCAG	2 cut(s)	195, 255
BseNI	ACTGG	1 cut(s)	478
BseRI	GAGGAG	2 cut(s)	28, 311
BseSI	GKGCMC	1 cut(s)	346
BseXI	GCAGC	1 cut(s)	1750
Bsh1236I	CGCG	1 cut(s)	1473
BshFI	GGCC	1 cut(s)	1022
BshNI	GGYRCC	1 cut(s)	341
BshTI	ACCGGT	1 cut(s)	1410
BshVI	ATCGAT	1 cut(s)	1202
BsiSI	CCGG	3 cut(s)	104, 1411, 1745
BslFI	GGGAC	3 cut(s)	789, 900, 1152
BslI	CCNNNNNNNGG	2 cut(s)	169, 789
BsmAI	GTCTC	1 cut(s)	1030
BsmFI	GGGAC	3 cut(s)	789, 900, 1152
BsnI	GGCC	1 cut(s)	1022
Bsp1286I	GDGCHC	2 cut(s)	346, 1431
Bsp13I	TCCGGA	1 cut(s)	1744
Bsp1407I	TGTACA	1 cut(s)	651
Bsp143I	GATC	5 cut(s)	106, 708, 910, 984, 1089
Bsp19I	CCATGG	1 cut(s)	597
BspACI	CCGC	3 cut(s)	4, 160, 1473
BspANI	GGCC	1 cut(s)	1022
BspCNI	CTCAG	2 cut(s)	194, 254
BspDI	ATCGAT	1 cut(s)	1202
BspEI	TCCGGA	1 cut(s)	1744
BspFNI	CGCG	1 cut(s)	1473
BspLI	GGNNCC	4 cut(s)	102, 108, 343, 636
BspMI	ACCTGC	1 cut(s)	1715
BspPI	GGATC	2 cut(s)	101, 114
BspQI	GCTCTTC	1 cut(s)	38
BspT107I	GGYRCC	1 cut(s)	341
BspTI	CTTAAG	1 cut(s)	1751
BsrDI	GCAATG	2 cut(s)	942, 1717
BsrFI	RCCGGY	1 cut(s)	1410
BsrGI	TGTACA	1 cut(s)	651
BsrI	ACTGG	1 cut(s)	478
BssAI	RCCGGY	1 cut(s)	1410
BssECI	CCNNGG	2 cut(s)	261, 597
BssMI	GATC	5 cut(s)	106, 708, 910, 984, 1089
BssT1I	CCWWGG	2 cut(s)	261, 597
Bst4CI	ACNGT	5 cut(s)	396, 780, 891, 1174, 1532
Bst6I	CTCTTC	1 cut(s)	38
BstAFI	CTTAAG	1 cut(s)	1751
BstAPI	GCANNNNNTGC	1 cut(s)	1707
BstAUI	TGTACA	1 cut(s)	651
BstC8I	GCNNGC	5 cut(s)	164, 187, 1230, 1471, 1621
BstDEI	CTNAG	7 cut(s)	21, 181, 241, 468, 712, 1009, 1615
BstDSI	CCRYGG	1 cut(s)	597
BstF5I	GGATG	6 cut(s)	280, 331, 504, 700, 1242, 1441
BstFNI	CGCG	1 cut(s)	1473
BstH2I	RGCGCY	1 cut(s)	128
BstHHI	GCGC	1 cut(s)	127
BstKTI	GATC	5 cut(s)	109, 711, 913, 987, 1092
BstMAI	GTCTC	1 cut(s)	1030
BstMBI	GATC	5 cut(s)	106, 708, 910, 984, 1089
BstMWI	GCNNNNNNNGC	3 cut(s)	593, 803, 1707
BstNSI	RCATGY	2 cut(s)	877, 1043
BstSCI	CCNGG	1 cut(s)	102
BstSFI	CTRYAG	1 cut(s)	1519
BstSLI	GKGCMC	1 cut(s)	346
BstUI	CGCG	1 cut(s)	1473
BstV1I	GCAGC	1 cut(s)	1750
BstX2I	RGATCY	2 cut(s)	106, 708
BstYI	RGATCY	2 cut(s)	106, 708
Bsu15I	ATCGAT	1 cut(s)	1202
BsuRI	GGCC	1 cut(s)	1022
BsuTUI	ATCGAT	1 cut(s)	1202
BtgI	CCRYGG	1 cut(s)	597
BtgZI	GCGATG	2 cut(s)	296, 821
BtsCI	GGATG	6 cut(s)	280, 331, 504, 700, 1242, 1441
BtsIMutI	CAGTG	1 cut(s)	1170
BveI	ACCTGC	1 cut(s)	1715
Cac8I	GCNNGC	5 cut(s)	164, 187, 1230, 1471, 1621
CfoI	GCGC	1 cut(s)	127
Cfr10I	RCCGGY	1 cut(s)	1410
Cfr13I	GGNCC	1 cut(s)	100
ClaI	ATCGAT	1 cut(s)	1202
Csp6I	GTAC	5 cut(s)	149, 630, 652, 969, 1498
CspAI	ACCGGT	1 cut(s)	1410
CspCI	CAANNNNNGTGG	2 cut(s)	1159, 1194
CviAII	CATG	6 cut(s)	143, 598, 874, 932, 1040, 1432
CviQI	GTAC	5 cut(s)	149, 630, 652, 969, 1498
DdeI	CTNAG	7 cut(s)	21, 181, 241, 468, 712, 1009, 1615
DpnI	GATC	5 cut(s)	108, 710, 912, 986, 1091
DpnII	GATC	5 cut(s)	106, 708, 910, 984, 1089
DraI	TTTAAA	1 cut(s)	705
DraIII	CACNNNGTG	1 cut(s)	521
Eam1104I	CTCTTC	1 cut(s)	38
EarI	CTCTTC	1 cut(s)	38
Eco130I	CCWWGG	2 cut(s)	261, 597
Eco24I	GRGCYC	1 cut(s)	1431
Eco32I	GATATC	1 cut(s)	18
Eco47I	GGWCC	1 cut(s)	100
EcoO109I	RGGNCCY	1 cut(s)	100
EcoRI	GAATTC	1 cut(s)	1028
EcoRV	GATATC	1 cut(s)	18
EcoT14I	CCWWGG	2 cut(s)	261, 597
EcoT38I	GRGCYC	1 cut(s)	1431
ErhI	CCWWGG	2 cut(s)	261, 597
FaeI	CATG	6 cut(s)	146, 601, 877, 935, 1043, 1435
FalI	AAGNNNNNCTT	2 cut(s)	891, 923
FaqI	GGGAC	3 cut(s)	789, 900, 1152
FatI	CATG	6 cut(s)	142, 597, 873, 931, 1039, 1431
FbaI	TGATCA	2 cut(s)	910, 1089
Fnu4HI	GCNGC	1 cut(s)	1764
FokI	GGATG	6 cut(s)	287, 338, 511, 707, 1249, 1448
FriOI	GRGCYC	1 cut(s)	1431
Fsp4HI	GCNGC	1 cut(s)	1764
FspBI	CTAG	4 cut(s)	495, 1233, 1349, 1443
GlaI	GCGC	1 cut(s)	126
GluI	GCNGC	1 cut(s)	1764
GsuI	CTGGAG	3 cut(s)	1054, 1179, 1341
HaeII	RGCGCY	1 cut(s)	128
HaeIII	GGCC	1 cut(s)	1022
HapII	CCGG	3 cut(s)	104, 1411, 1745
HhaI	GCGC	1 cut(s)	127
Hin1II	CATG	6 cut(s)	146, 601, 877, 935, 1043, 1435
Hin6I	GCGC	1 cut(s)	125
HinP1I	GCGC	1 cut(s)	125
HincII	GTYRAC	2 cut(s)	1015, 1048
HindII	GTYRAC	2 cut(s)	1015, 1048
HinfI	GANTC	1 cut(s)	1502
HpaII	CCGG	3 cut(s)	104, 1411, 1745
Hpy166II	GTNNAC	5 cut(s)	202, 1015, 1048, 1408, 1498
Hpy188I	TCNGA	7 cut(s)	67, 121, 210, 787, 1314, 1566, 1639
Hpy188III	TCNNGA	8 cut(s)	908, 1033, 1087, 1158, 1247, 1349, 1589, 1745
Hpy8I	GTNNAC	5 cut(s)	202, 1015, 1048, 1408, 1498
HpyAV	CCTTC	7 cut(s)	91, 177, 619, 787, 893, 998, 1402
HpyCH4III	ACNGT	5 cut(s)	396, 780, 891, 1174, 1532
HpyCH4IV	ACGT	4 cut(s)	520, 657, 1188, 1644
HpyCH4V	TGCA	9 cut(s)	189, 678, 894, 935, 1043, 1127, 1209, 1262, 1710
HpyF10VI	GCNNNNNNNGC	3 cut(s)	593, 803, 1707
HpyF3I	CTNAG	7 cut(s)	21, 181, 241, 468, 712, 1009, 1615
HpySE526I	ACGT	4 cut(s)	520, 657, 1188, 1644
Hsp92II	CATG	6 cut(s)	146, 601, 877, 935, 1043, 1435
HspAI	GCGC	1 cut(s)	125
Kpn2I	TCCGGA	1 cut(s)	1744
Ksp22I	TGATCA	2 cut(s)	910, 1089
Kzo9I	GATC	5 cut(s)	106, 708, 910, 984, 1089
LguI	GCTCTTC	1 cut(s)	38
LmnI	GCTCC	2 cut(s)	634, 1225
Lsp1109I	GCAGC	1 cut(s)	1750
LweI	GCATC	2 cut(s)	688, 983
MaeI	CTAG	4 cut(s)	495, 1233, 1349, 1443
MaeII	ACGT	4 cut(s)	520, 657, 1188, 1644
MaeIII	GTNAC	5 cut(s)	52, 436, 490, 502, 541
MalI	GATC	5 cut(s)	108, 710, 912, 986, 1091
MboI	GATC	5 cut(s)	106, 708, 910, 984, 1089
MboII	GAAGA	3 cut(s)	25, 1471, 1553
MflI	RGATCY	2 cut(s)	106, 708
MhlI	GDGCHC	2 cut(s)	346, 1431
MmeI	TCCRAC	1 cut(s)	180
MroI	TCCGGA	1 cut(s)	1744
MroXI	GAANNNNTTC	1 cut(s)	815
MseI	TTAA	8 cut(s)	410, 614, 704, 1290, 1329, 1511, 1697, 1752
MslI	CAYNNNNRTG	2 cut(s)	497, 1204
MspCI	CTTAAG	1 cut(s)	1751
MspI	CCGG	3 cut(s)	104, 1411, 1745
MspR9I	CCNGG	1 cut(s)	104
MvnI	CGCG	1 cut(s)	1473
MwoI	GCNNNNNNNGC	3 cut(s)	593, 803, 1707
NciI	CCSGG	1 cut(s)	104
NcoI	CCATGG	1 cut(s)	597
NdeII	GATC	5 cut(s)	106, 708, 910, 984, 1089
NlaIII	CATG	6 cut(s)	146, 601, 877, 935, 1043, 1435
NlaIV	GGNNCC	4 cut(s)	102, 108, 343, 636
NmuCI	GTSAC	1 cut(s)	490
NspI	RCATGY	2 cut(s)	877, 1043
PciSI	GCTCTTC	1 cut(s)	38
PdmI	GAANNNNTTC	1 cut(s)	815
PfeI	GAWTC	1 cut(s)	1502
PflFI	GACNNNGTC	1 cut(s)	214
PinAI	ACCGGT	1 cut(s)	1410
PkrI	GCNGC	1 cut(s)	1765
PpuMI	RGGWCCY	1 cut(s)	100
PsiI	TTATAA	3 cut(s)	350, 662, 975
Psp1406I	AACGTT	2 cut(s)	657, 1188
Psp5II	RGGWCCY	1 cut(s)	100
PspN4I	GGNNCC	4 cut(s)	102, 108, 343, 636
PspPI	GGNCC	1 cut(s)	100
PspPPI	RGGWCCY	1 cut(s)	100
PsuI	RGATCY	2 cut(s)	106, 708
PsyI	GACNNNGTC	1 cut(s)	214
RsaI	GTAC	5 cut(s)	150, 631, 653, 970, 1499
RsaNI	GTAC	5 cut(s)	149, 630, 652, 969, 1498
RseI	CAYNNNNRTG	2 cut(s)	497, 1204
SapI	GCTCTTC	1 cut(s)	38
SaqAI	TTAA	8 cut(s)	410, 614, 704, 1290, 1329, 1511, 1697, 1752
SatI	GCNGC	1 cut(s)	1764
Sau3AI	GATC	5 cut(s)	106, 708, 910, 984, 1089
Sau96I	GGNCC	1 cut(s)	100
ScrFI	CCNGG	1 cut(s)	104
SduI	GDGCHC	2 cut(s)	346, 1431
SfaNI	GCATC	2 cut(s)	688, 983
SfcI	CTRYAG	1 cut(s)	1519
SinI	GGWCC	1 cut(s)	100
SmiMI	CAYNNNNRTG	2 cut(s)	497, 1204
SmlI	CTYRAG	1 cut(s)	1751
SmoI	CTYRAG	1 cut(s)	1751
SsiI	CCGC	3 cut(s)	4, 160, 1473
SspMI	CTAG	4 cut(s)	495, 1233, 1349, 1443
StyD4I	CCNGG	1 cut(s)	102
StyI	CCWWGG	2 cut(s)	261, 597
TaaI	ACNGT	5 cut(s)	396, 780, 891, 1174, 1532
TaiI	ACGT	4 cut(s)	523, 660, 1191, 1647
TaqI	TCGA	4 cut(s)	623, 987, 1202, 1688
TatI	WGTACW	1 cut(s)	651
TfiI	GAWTC	1 cut(s)	1502
Tru1I	TTAA	8 cut(s)	410, 614, 704, 1290, 1329, 1511, 1697, 1752
Tru9I	TTAA	8 cut(s)	410, 614, 704, 1290, 1329, 1511, 1697, 1752
TscAI	CASTG	1 cut(s)	1177
TseFI	GTSAC	1 cut(s)	490
TseI	GCWGC	1 cut(s)	1763
Tsp45I	GTSAC	1 cut(s)	490
TspDTI	ATGAA	6 cut(s)	128, 243, 737, 824, 1550, 1739
TspGWI	ACGGA	2 cut(s)	647, 1320
TspRI	CASTG	1 cut(s)	1177
Tth111I	GACNNNGTC	1 cut(s)	214
Vha464I	CTTAAG	1 cut(s)	1751
VpaK11BI	GGWCC	1 cut(s)	100
XapI	RAATTY	2 cut(s)	114, 1028
XbaI	TCTAGA	1 cut(s)	1348
XceI	RCATGY	2 cut(s)	877, 1043
XcmI	CCANNNNNNNNNTGG	2 cut(s)	268, 1111
XmnI	GAANNNNTTC	1 cut(s)	815
XspI	CTAG	4 cut(s)	495, 1233, 1349, 1443

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.