The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins
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| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.3G018100_v2.0.a1 |
| rosa_multiflora | Rmu_co8391663.1_g000001 Rmu_sc0001169.1_g000013 Rmu_sc0034979.1_g000001 |
| rosa_samantha | Rh2BG489000 Rh2BG489100 Rh2DG498000 Rh2DG498100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 377 |
| AciI | CCGC | 1 cut(s) | 97 |
| AclWI | GGATC | 1 cut(s) | 119 |
| AcoI | YGGCCR | 1 cut(s) | 234 |
| AcsI | RAATTY | 1 cut(s) | 217 |
| AcuI | CTGAAG | 3 cut(s) | 89, 159, 197 |
| AcyI | GRCGYC | 1 cut(s) | 374 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 202 |
| AgsI | TTSAA | 2 cut(s) | 32, 494 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 209, 241 |
| AluBI | AGCT | 3 cut(s) | 10, 109, 287 |
| AluI | AGCT | 3 cut(s) | 10, 109, 287 |
| Alw26I | GTCTC | 2 cut(s) | 331, 365 |
| AlwI | GGATC | 1 cut(s) | 119 |
| AoxI | GGCC | 1 cut(s) | 234 |
| ApoI | RAATTY | 1 cut(s) | 217 |
| BalI | TGGCCA | 1 cut(s) | 236 |
| BccI | CCATC | 2 cut(s) | 65, 235 |
| BcoDI | GTCTC | 2 cut(s) | 331, 365 |
| BfaI | CTAG | 1 cut(s) | 284 |
| BmsI | GCATC | 1 cut(s) | 70 |
| BpmI | CTGGAG | 2 cut(s) | 75, 273 |
| BpuEI | CTTGAG | 2 cut(s) | 32, 407 |
| BsaHI | GRCGYC | 1 cut(s) | 374 |
| BsaI | GGTCTC | 1 cut(s) | 331 |
| BsaJI | CCNNGG | 1 cut(s) | 201 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 48, 78, 271, 301 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 202 |
| Bse1I | ACTGG | 1 cut(s) | 58 |
| BseDI | CCNNGG | 1 cut(s) | 201 |
| BseGI | GGATG | 2 cut(s) | 76, 414 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 202 |
| BseMII | CTCAG | 2 cut(s) | 284, 477 |
| BseNI | ACTGG | 1 cut(s) | 58 |
| BseRI | GAGGAG | 1 cut(s) | 319 |
| BshFI | GGCC | 1 cut(s) | 236 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 202 |
| BsmAI | GTCTC | 2 cut(s) | 331, 365 |
| BsmBI | CGTCTC | 1 cut(s) | 365 |
| BsmI | GAATGC | 1 cut(s) | 99 |
| BsnI | GGCC | 1 cut(s) | 236 |
| Bso31I | GGTCTC | 1 cut(s) | 331 |
| Bsp143I | GATC | 3 cut(s) | 37, 124, 247 |
| BspACI | CCGC | 1 cut(s) | 97 |
| BspANI | GGCC | 1 cut(s) | 236 |
| BspCNI | CTCAG | 2 cut(s) | 283, 478 |
| BspPI | GGATC | 1 cut(s) | 119 |
| BspTNI | GGTCTC | 1 cut(s) | 331 |
| BsrI | ACTGG | 1 cut(s) | 58 |
| BssECI | CCNNGG | 1 cut(s) | 201 |
| BssMI | GATC | 3 cut(s) | 37, 124, 247 |
| BssNI | GRCGYC | 1 cut(s) | 374 |
| BssT1I | CCWWGG | 1 cut(s) | 201 |
| Bst4CI | ACNGT | 3 cut(s) | 154, 187, 397 |
| BstACI | GRCGYC | 1 cut(s) | 374 |
| BstC8I | GCNNGC | 1 cut(s) | 8 |
| BstDEI | CTNAG | 2 cut(s) | 270, 486 |
| BstF5I | GGATG | 2 cut(s) | 76, 414 |
| BstKTI | GATC | 3 cut(s) | 40, 127, 250 |
| BstMAI | GTCTC | 2 cut(s) | 331, 365 |
| BstMBI | GATC | 3 cut(s) | 37, 124, 247 |
| BsuRI | GGCC | 1 cut(s) | 236 |
| BtsCI | GGATG | 2 cut(s) | 76, 414 |
| Cac8I | GCNNGC | 1 cut(s) | 8 |
| CseI | GACGC | 1 cut(s) | 254 |
| CviAII | CATG | 1 cut(s) | 453 |
| CviJI | RGCY | 7 cut(s) | 6, 10, 109, 143, 236, 287, 485 |
| CviKI_1 | RGCY | 7 cut(s) | 6, 10, 109, 143, 236, 287, 485 |
| DdeI | CTNAG | 2 cut(s) | 270, 486 |
| DpnI | GATC | 3 cut(s) | 39, 126, 249 |
| DpnII | GATC | 3 cut(s) | 37, 124, 247 |
| EaeI | YGGCCR | 1 cut(s) | 234 |
| Eco130I | CCWWGG | 1 cut(s) | 201 |
| Eco31I | GGTCTC | 1 cut(s) | 331 |
| Eco57I | CTGAAG | 3 cut(s) | 89, 159, 197 |
| EcoT14I | CCWWGG | 1 cut(s) | 201 |
| ErhI | CCWWGG | 1 cut(s) | 201 |
| Esp3I | CGTCTC | 1 cut(s) | 365 |
| FaeI | CATG | 1 cut(s) | 456 |
| FatI | CATG | 1 cut(s) | 452 |
| FokI | GGATG | 2 cut(s) | 83, 401 |
| FspBI | CTAG | 1 cut(s) | 284 |
| GsuI | CTGGAG | 2 cut(s) | 75, 273 |
| HaeIII | GGCC | 1 cut(s) | 236 |
| HgaI | GACGC | 1 cut(s) | 254 |
| Hin1I | GRCGYC | 1 cut(s) | 374 |
| Hin1II | CATG | 1 cut(s) | 456 |
| HinfI | GANTC | 2 cut(s) | 117, 293 |
| Hpy188I | TCNGA | 3 cut(s) | 216, 273, 474 |
| Hpy188III | TCNNGA | 3 cut(s) | 32, 176, 290 |
| HpyAV | CCTTC | 1 cut(s) | 456 |
| HpyCH4III | ACNGT | 3 cut(s) | 154, 187, 397 |
| HpyCH4IV | ACGT | 2 cut(s) | 46, 374 |
| HpyCH4V | TGCA | 1 cut(s) | 83 |
| HpyF3I | CTNAG | 2 cut(s) | 270, 486 |
| HpySE526I | ACGT | 2 cut(s) | 46, 374 |
| Hsp92I | GRCGYC | 1 cut(s) | 374 |
| Hsp92II | CATG | 1 cut(s) | 456 |
| Kzo9I | GATC | 3 cut(s) | 37, 124, 247 |
| LmnI | GCTCC | 1 cut(s) | 292 |
| LpnPI | CCDG | 6 cut(s) | 20, 39, 99, 141, 303, 327 |
| LweI | GCATC | 1 cut(s) | 70 |
| MaeI | CTAG | 1 cut(s) | 284 |
| MaeII | ACGT | 2 cut(s) | 46, 374 |
| MaeIII | GTNAC | 3 cut(s) | 148, 181, 356 |
| MalI | GATC | 3 cut(s) | 39, 126, 249 |
| MboI | GATC | 3 cut(s) | 37, 124, 247 |
| MboII | GAAGA | 3 cut(s) | 32, 95, 441 |
| MlsI | TGGCCA | 1 cut(s) | 236 |
| MluCI | AATT | 1 cut(s) | 217 |
| MluNI | TGGCCA | 1 cut(s) | 236 |
| MnlI | CCTC | 3 cut(s) | 19, 279, 340 |
| Mox20I | TGGCCA | 1 cut(s) | 236 |
| MscI | TGGCCA | 1 cut(s) | 236 |
| MseI | TTAA | 4 cut(s) | 156, 252, 321, 408 |
| Msp20I | TGGCCA | 1 cut(s) | 236 |
| Mva1269I | GAATGC | 1 cut(s) | 99 |
| NdeII | GATC | 3 cut(s) | 37, 124, 247 |
| NlaIII | CATG | 1 cut(s) | 456 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 183 |
| PctI | GAATGC | 1 cut(s) | 99 |
| PfeI | GAWTC | 2 cut(s) | 117, 293 |
| SaqAI | TTAA | 4 cut(s) | 156, 252, 321, 408 |
| Sau3AI | GATC | 3 cut(s) | 37, 124, 247 |
| SetI | ASST | 7 cut(s) | 12, 30, 49, 111, 289, 327, 377 |
| SfaNI | GCATC | 1 cut(s) | 70 |
| SmlI | CTYRAG | 2 cut(s) | 11, 386 |
| SmoI | CTYRAG | 2 cut(s) | 11, 386 |
| Sse9I | AATT | 1 cut(s) | 217 |
| SsiI | CCGC | 1 cut(s) | 97 |
| SspMI | CTAG | 1 cut(s) | 284 |
| StyI | CCWWGG | 1 cut(s) | 201 |
| TaaI | ACNGT | 3 cut(s) | 154, 187, 397 |
| TaiI | ACGT | 2 cut(s) | 49, 377 |
| TaqI | TCGA | 1 cut(s) | 177 |
| TasI | AATT | 1 cut(s) | 217 |
| TfiI | GAWTC | 2 cut(s) | 117, 293 |
| Tru1I | TTAA | 4 cut(s) | 156, 252, 321, 408 |
| Tru9I | TTAA | 4 cut(s) | 156, 252, 321, 408 |
| TspDTI | ATGAA | 1 cut(s) | 441 |
| XapI | RAATTY | 1 cut(s) | 217 |
| XspI | CTAG | 1 cut(s) | 284 |
| ZraI | GACGTC | 1 cut(s) | 375 |