The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins
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| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.3G018100_v2.0.a1 |
| rosa_multiflora | Rmu_co8391663.1_g000001 Rmu_sc0001169.1_g000013 Rmu_sc0034979.1_g000001 |
| rosa_samantha | Rh2BG489000 Rh2BG489100 Rh2DG498000 Rh2DG498100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 19 |
| AgsI | TTSAA | 1 cut(s) | 205 |
| AluBI | AGCT | 2 cut(s) | 133, 219 |
| AluI | AGCT | 2 cut(s) | 133, 219 |
| ApeKI | GCWGC | 2 cut(s) | 53, 216 |
| AsuHPI | GGTGA | 2 cut(s) | 109, 190 |
| BbvI | GCAGC | 1 cut(s) | 40 |
| BccI | CCATC | 1 cut(s) | 119 |
| BciVI | GTATCC | 1 cut(s) | 134 |
| BfuI | GTATCC | 1 cut(s) | 134 |
| BisI | GCNGC | 2 cut(s) | 54, 217 |
| BlsI | GCNGC | 2 cut(s) | 55, 218 |
| BmsI | GCATC | 1 cut(s) | 79 |
| Bse1I | ACTGG | 1 cut(s) | 33 |
| BseGI | GGATG | 1 cut(s) | 94 |
| BseMII | CTCAG | 1 cut(s) | 179 |
| BseNI | ACTGG | 1 cut(s) | 33 |
| BseXI | GCAGC | 1 cut(s) | 40 |
| BslFI | GGGAC | 1 cut(s) | 203 |
| BsmFI | GGGAC | 1 cut(s) | 203 |
| Bsp143I | GATC | 1 cut(s) | 195 |
| BspCNI | CTCAG | 1 cut(s) | 178 |
| BsrI | ACTGG | 1 cut(s) | 33 |
| BssMI | GATC | 1 cut(s) | 195 |
| Bst4CI | ACNGT | 1 cut(s) | 21 |
| BstDEI | CTNAG | 3 cut(s) | 134, 165, 179 |
| BstF5I | GGATG | 1 cut(s) | 94 |
| BstKTI | GATC | 1 cut(s) | 198 |
| BstMBI | GATC | 1 cut(s) | 195 |
| BstV1I | GCAGC | 1 cut(s) | 40 |
| BsuI | GTATCC | 1 cut(s) | 134 |
| BtsCI | GGATG | 1 cut(s) | 94 |
| BtsIMutI | CAGTG | 1 cut(s) | 26 |
| CviJI | RGCY | 2 cut(s) | 133, 219 |
| CviKI_1 | RGCY | 2 cut(s) | 133, 219 |
| DdeI | CTNAG | 3 cut(s) | 134, 165, 179 |
| DpnI | GATC | 1 cut(s) | 197 |
| DpnII | GATC | 1 cut(s) | 195 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 19 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 19 |
| FaiI | YATR | 1 cut(s) | 66 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 185, 217 |
| FaqI | GGGAC | 1 cut(s) | 203 |
| Fnu4HI | GCNGC | 2 cut(s) | 54, 217 |
| FokI | GGATG | 1 cut(s) | 101 |
| Fsp4HI | GCNGC | 2 cut(s) | 54, 217 |
| GluI | GCNGC | 2 cut(s) | 54, 217 |
| HinfI | GANTC | 3 cut(s) | 13, 45, 163 |
| HphI | GGTGA | 2 cut(s) | 109, 190 |
| Hpy188I | TCNGA | 1 cut(s) | 149 |
| Hpy188III | TCNNGA | 1 cut(s) | 222 |
| Hpy99I | CGWCG | 1 cut(s) | 25 |
| HpyAV | CCTTC | 2 cut(s) | 26, 205 |
| HpyCH4III | ACNGT | 1 cut(s) | 21 |
| HpyCH4V | TGCA | 1 cut(s) | 68 |
| HpyF3I | CTNAG | 3 cut(s) | 134, 165, 179 |
| Kzo9I | GATC | 1 cut(s) | 195 |
| LpnPI | CCDG | 3 cut(s) | 14, 23, 152 |
| Lsp1109I | GCAGC | 1 cut(s) | 40 |
| LweI | GCATC | 1 cut(s) | 79 |
| MalI | GATC | 1 cut(s) | 197 |
| MboI | GATC | 1 cut(s) | 195 |
| MluCI | AATT | 1 cut(s) | 150 |
| MlyI | GAGTC | 3 cut(s) | 7, 54, 157 |
| MnlI | CCTC | 1 cut(s) | 79 |
| NdeII | GATC | 1 cut(s) | 195 |
| PkrI | GCNGC | 2 cut(s) | 55, 218 |
| PleI | GAGTC | 3 cut(s) | 7, 53, 157 |
| PpsI | GAGTC | 3 cut(s) | 7, 53, 157 |
| SatI | GCNGC | 2 cut(s) | 54, 217 |
| Sau3AI | GATC | 1 cut(s) | 195 |
| SchI | GAGTC | 3 cut(s) | 7, 54, 157 |
| SetI | ASST | 3 cut(s) | 135, 203, 221 |
| SfaNI | GCATC | 1 cut(s) | 79 |
| SgeI | CNNG | 9 cut(s) | 22, 41, 62, 131, 172, 179, 197, 205, 214 |
| Sse9I | AATT | 1 cut(s) | 150 |
| TaaI | ACNGT | 1 cut(s) | 21 |
| TasI | AATT | 1 cut(s) | 150 |
| TscAI | CASTG | 1 cut(s) | 33 |
| TseI | GCWGC | 2 cut(s) | 53, 216 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspRI | CASTG | 1 cut(s) | 33 |