transcription by RNA polymerase III
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G11475 |
| fragaria_vesca | FvH4_4g32930 FvH4_4g32930 |
| malus_domestica | MD05G1050000.v1.1 MD10G1057300.v1.1 |
| prunus_persica | Prupe.1G250300_v2.0.a1 Prupe.1G250300_v2.0.a1 |
| pyrus_communis | pycom05g04190 pycom10g04420 |
| rosa_chinensis | RchiOBHm_Chr5g0051151 |
| rosa_multiflora | Rmu_sc0000446.1_g000014 |
| rosa_roxburghii | Rroxscaffold_1G00029300 |
| rosa_rugosa | Rorug05G0266000 |
| rosa_wichuraiana | Rw0G023650 Rw5G031960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AluBI | AGCT | 1 cut(s) | 175 |
| AluI | AGCT | 1 cut(s) | 175 |
| ApeKI | GCWGC | 1 cut(s) | 132 |
| AspLEI | GCGC | 1 cut(s) | 141 |
| AsuHPI | GGTGA | 3 cut(s) | 16, 49, 107 |
| BbvI | GCAGC | 1 cut(s) | 119 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 80, 114 |
| BclI | TGATCA | 1 cut(s) | 3 |
| BfmI | CTRYAG | 1 cut(s) | 133 |
| BisI | GCNGC | 1 cut(s) | 133 |
| BlsI | GCNGC | 1 cut(s) | 134 |
| BmsI | GCATC | 2 cut(s) | 88, 97 |
| BoxI | GACNNNNGTC | 1 cut(s) | 155 |
| BpmI | CTGGAG | 1 cut(s) | 215 |
| Bse1I | ACTGG | 1 cut(s) | 11 |
| BseNI | ACTGG | 1 cut(s) | 11 |
| BseXI | GCAGC | 1 cut(s) | 119 |
| BslFI | GGGAC | 1 cut(s) | 68 |
| BsmFI | GGGAC | 1 cut(s) | 68 |
| Bsp143I | GATC | 2 cut(s) | 3, 160 |
| BspMAI | CTGCAG | 1 cut(s) | 137 |
| BsrI | ACTGG | 1 cut(s) | 11 |
| BssMI | GATC | 2 cut(s) | 3, 160 |
| Bst4CI | ACNGT | 1 cut(s) | 212 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 107 |
| BstC8I | GCNNGC | 3 cut(s) | 78, 137, 143 |
| BstHHI | GCGC | 1 cut(s) | 141 |
| BstKTI | GATC | 2 cut(s) | 6, 163 |
| BstMBI | GATC | 2 cut(s) | 3, 160 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 107, 138 |
| BstNSI | RCATGY | 1 cut(s) | 145 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 155 |
| BstSFI | CTRYAG | 1 cut(s) | 133 |
| BstV1I | GCAGC | 1 cut(s) | 119 |
| BtsIMutI | CAGTG | 1 cut(s) | 18 |
| Cac8I | GCNNGC | 3 cut(s) | 78, 137, 143 |
| CfoI | GCGC | 1 cut(s) | 141 |
| CviAII | CATG | 2 cut(s) | 142, 155 |
| CviJI | RGCY | 1 cut(s) | 175 |
| CviKI_1 | RGCY | 1 cut(s) | 175 |
| DpnI | GATC | 2 cut(s) | 5, 162 |
| DpnII | GATC | 2 cut(s) | 3, 160 |
| EcoT22I | ATGCAT | 1 cut(s) | 112 |
| FaeI | CATG | 2 cut(s) | 145, 158 |
| FaiI | YATR | 3 cut(s) | 143, 149, 156 |
| FaqI | GGGAC | 1 cut(s) | 68 |
| FatI | CATG | 2 cut(s) | 141, 154 |
| FbaI | TGATCA | 1 cut(s) | 3 |
| Fnu4HI | GCNGC | 1 cut(s) | 133 |
| Fsp4HI | GCNGC | 1 cut(s) | 133 |
| GlaI | GCGC | 1 cut(s) | 140 |
| GluI | GCNGC | 1 cut(s) | 133 |
| GsuI | CTGGAG | 1 cut(s) | 215 |
| HhaI | GCGC | 1 cut(s) | 141 |
| Hin1II | CATG | 2 cut(s) | 145, 158 |
| Hin6I | GCGC | 1 cut(s) | 139 |
| HinP1I | GCGC | 1 cut(s) | 139 |
| HindIII | AAGCTT | 1 cut(s) | 173 |
| HinfI | GANTC | 1 cut(s) | 151 |
| HphI | GGTGA | 3 cut(s) | 16, 49, 107 |
| Hpy188I | TCNGA | 1 cut(s) | 205 |
| Hpy188III | TCNNGA | 2 cut(s) | 65, 194 |
| HpyAV | CCTTC | 2 cut(s) | 80, 86 |
| HpyCH4III | ACNGT | 1 cut(s) | 212 |
| HpyCH4V | TGCA | 4 cut(s) | 76, 101, 110, 135 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 107, 138 |
| Hsp92II | CATG | 2 cut(s) | 145, 158 |
| HspAI | GCGC | 1 cut(s) | 139 |
| Ksp22I | TGATCA | 1 cut(s) | 3 |
| Kzo9I | GATC | 2 cut(s) | 3, 160 |
| LpnPI | CCDG | 4 cut(s) | 24, 40, 121, 179 |
| Lsp1109I | GCAGC | 1 cut(s) | 119 |
| LweI | GCATC | 2 cut(s) | 88, 97 |
| MalI | GATC | 2 cut(s) | 5, 162 |
| MboI | GATC | 2 cut(s) | 3, 160 |
| MlyI | GAGTC | 1 cut(s) | 145 |
| MmeI | TCCRAC | 1 cut(s) | 183 |
| Mph1103I | ATGCAT | 1 cut(s) | 112 |
| MslI | CAYNNNNRTG | 2 cut(s) | 11, 146 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 107, 138 |
| NdeII | GATC | 2 cut(s) | 3, 160 |
| NlaIII | CATG | 2 cut(s) | 145, 158 |
| NsiI | ATGCAT | 1 cut(s) | 112 |
| NspI | RCATGY | 1 cut(s) | 145 |
| PaeI | GCATGC | 1 cut(s) | 145 |
| PkrI | GCNGC | 1 cut(s) | 134 |
| PleI | GAGTC | 1 cut(s) | 145 |
| PpsI | GAGTC | 1 cut(s) | 145 |
| PshAI | GACNNNNGTC | 1 cut(s) | 155 |
| PstI | CTGCAG | 1 cut(s) | 137 |
| RseI | CAYNNNNRTG | 2 cut(s) | 11, 146 |
| SatI | GCNGC | 1 cut(s) | 133 |
| Sau3AI | GATC | 2 cut(s) | 3, 160 |
| SchI | GAGTC | 1 cut(s) | 145 |
| SetI | ASST | 5 cut(s) | 29, 39, 72, 97, 177 |
| SfaNI | GCATC | 2 cut(s) | 88, 97 |
| SfcI | CTRYAG | 1 cut(s) | 133 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 11, 146 |
| SphI | GCATGC | 1 cut(s) | 145 |
| TaaI | ACNGT | 1 cut(s) | 212 |
| TaqI | TCGA | 1 cut(s) | 159 |
| TscAI | CASTG | 1 cut(s) | 18 |
| TseI | GCWGC | 1 cut(s) | 132 |
| TspRI | CASTG | 1 cut(s) | 18 |
| XceI | RCATGY | 1 cut(s) | 145 |
| Zsp2I | ATGCAT | 1 cut(s) | 112 |