Rorug05G0266000

Nuclear cap-binding protein subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0005505
Physical Location & Seq
Forward (+)
30013830 .. 30017260
3431 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0266000.1

Sequence Viewer

Length: 2013 bp
ATGGAAACAAGTTCGAGCATGAAGATCCCGTGGAGCTTGTTGATTCTATTGTTTTTGGGGGTGTTTGCTTCTAGGATAGAAGTTAGTTACGGTCAAGCAGACGGCGGCGATGACGGAGGGGACGGCGACAAGCCAGCCCCTCCGCCGGAGCAAGATGACTGCGATGGCATCTTCTTGACCTACACGTTCATCTCGCGCGAGAAAGAATATCCGCACAAGAAGAACGTGTCGGCACAGGCCTGGGCGTTCAAGTCGGAGGCCAGCATCTTGAACGCCGGGTCCTCGGAGCTCAAGGCGTGGAAGATGTACATAGGGTTTCAGCATCGAGAGATATTGGTGTCGGCAGACGGGGCTGTGATGGTGGACGGTGGTGATTTCCCTGCCTCCGTTGGGAAAAACGGGACTTACTTTCAAGGAAACCCTCAAACCAACTTGAAGAACTCCATCGATACGGCCGGGGATGTCAATCAGATTCAGGCAAGGATTAAATTGAAGGGAACCCAGTTCGGCCTCCCGGCCAAGGCAATACCCATGCCCAAGACCATTCGCCTCGTCAACGATGGATATAAGTGCCCTGCACCTCGTATACGAGGGAAGTCAAGCATGTTCGTTTGTTGTCAACCAGACCCAAAGTTCAAGTTGAAAGACGAAAAAGGCACCAAATTCCTGCCTAAACAGAATGGTGATCTCTCCTTCATATACGATGTAATGGATTCCTATTCAAACAACTATCTGGCCCAAGTCACCATCGACAACCTGCACCCACTCGGCCGTCTTGACCACTGGAATTTGACTTGGGAATGGCAGAAGAATGAGTTCATTCAGACAATGAGAGGGGCCTATACTCACAAGAGGGACCCATCCGAGTGCCTCTACGGCCAGGCTGGAAAGATTTACAAGGACATGGACTTCTCTAAGGTCATGAATTGTGAAAAGAAGCCTACCATCACCGACCTCCCACCGACTATGAAGGATGACGAGAAGGTCGGAAAGCTGCCCAAGTGCTGTAGAAACGGAACCATCTTGCCGACAATCATGAACGAGACCCAATCACAGGCAATGTTCCAGCTCCAAGTCTTCAAGCTTCCGCCTGATGACAATAGAACCTCTCTCACTCCACCCCAGAAGTGGAGCATTTATGGGCCGGTGAACCCTAATTACGTATGTGGACCTCCAATCAGAATCGAACCAACTCAGTTTCCTGACCCGAGCGGGCTTCAGTCTACAACTTCTGCAATTGCAAGTTGGCAAGTGGTTTGCAACATAACCAAGCCAAAGGTGCCTCGTTGCTGCGTGTCATTTTCAGCCTACTTCAGCGAGTCGGTGGTGCCATGCAACACTTGCGCCTGTGGCTGCCAGGAAAGTAAGCTACCTCACTGCGACGTAAAAGCCAAAGCAATGCCTCTACCGGGAGAAGCATTGCTTGTGCCTTTTGCCAACAGAACTGAAAAGGCGAAAGCTTGGGCCAAAATCAAACACATGGACATACCCAAAAAGCTTCCATGCGGAGACAACTGTGGAGTTAGTCTCAATTGGCACATTGACTCGGACTACCAGAGTGGATGGACTGCTCGTCTAACTCTCTTTAACTGGGGGAATGAACCATTTCAAGATTGGTTCACGGCAGTAGAAATGAACAAGGCTTTTGAAGACTATGAAAATGTGTACTCATTCAATGGGACGAAAATGGACAAGGTCAAAAACACCATCTTGTTTCAGGGTCTGAAAGGTTTGAACTACTTGATAGAAATGAAAAATGCGACCAATAATAACGACCCTCGGGTACCTGGAAAGCAGCAGTCGGTTATTTCTTTTAAGAAGACACACTTTCATGATATTAATATAAAGGGGGGTCAAGGTTTCCCATCAAAAGTTCTGTTCAATGGAGAGGAGTGCTCACTTCCTAGGGAATTCCCCAAGAGCGGCGCAGAGCATCAGGCCCGTAGTAATATCCTCCTCATCTTGTTCGTTGTAATTGCGAGTTTTGTGTTCATGACAGACCGCTTCCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000184 GO:0000339 GO:0000375 GO:0000377 GO:0000394 GO:0000398 GO:0000956 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005845 GO:0005846 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0008380 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009892 GO:0009987 GO:0010033 GO:0010228 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0015031 GO:0015833 GO:0015931 GO:0016070 GO:0016071 GO:0016441 GO:0016458 GO:0019222 GO:0019439 GO:0022414 GO:0031047 GO:0031050 GO:0031053 GO:0031503 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033993 GO:0034470 GO:0034518 GO:0034613 GO:0034641 GO:0034655 GO:0034660 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044464 GO:0045184 GO:0046483 GO:0046700 GO:0046907 GO:0048519 GO:0048571 GO:0048573 GO:0048574 GO:0048608 GO:0048731 GO:0048856 GO:0050657 GO:0050658 GO:0050789 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070727 GO:0070887 GO:0070918 GO:0071166 GO:0071310 GO:0071359 GO:0071407 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0090304 GO:0097159 GO:0097305 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1901698 GO:1901699 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko03013 ko03015 ko03040 map03013 map03015 map03040
Pfam Domains
Protein Families
MIF4G MIF4G_like MIF4G_like_2

Protein Analysis

670

Amino Acids

75.01

Weight (kDa)

8.49

Isoelectric Point (pI)

33.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
COBRA PF04833 244 - 423 1.3e-63 COBRA-like protein
COB_C PF25079 429 - 639 3.4e-95 COBRA family C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 983
Acc36I ACCTGC 1 cut(s) 765
Acc65I GGTACC 1 cut(s) 1783
AccB1I GGYRCC 4 cut(s) 656, 1279, 1327, 1783
AccBSI CCGCTC 2 cut(s) 1212, 1923
AccI GTMKAC 2 cut(s) 586, 1223
AccII CGCG 2 cut(s) 196, 198
AciI CCGC 8 cut(s) 105, 143, 212, 1088, 1212, 1506, 1923, 2002
AclWI GGATC 1 cut(s) 19
AcoI YGGCCR 4 cut(s) 453, 516, 769, 877
AcsI RAATTY 3 cut(s) 662, 787, 1910
AcuI CTGAAG 2 cut(s) 1202, 1297
AfaI GTAC 3 cut(s) 308, 1667, 1785
AfiI CCNNNNNNNGG 7 cut(s) 145, 390, 520, 1054, 1128, 1409, 1922
AflIII ACRYGT 2 cut(s) 183, 225
AhdI GACNNNNNGTC 1 cut(s) 1572
AjnI CCWGG 4 cut(s) 239, 879, 1356, 1786
AloI GAACNNNNNNTCC 2 cut(s) 263, 295
AluBI AGCT 8 cut(s) 36, 289, 994, 1069, 1084, 1369, 1460, 1498
AluI AGCT 8 cut(s) 36, 289, 994, 1069, 1084, 1369, 1460, 1498
Alw21I GWGCWC 2 cut(s) 291, 1898
Alw26I GTCTC 3 cut(s) 1037, 1503, 1532
AlwI GGATC 1 cut(s) 19
AlwNI CAGNNNCTG 1 cut(s) 1723
Ama87I CYCGRG 2 cut(s) 1207, 1779
ApeKI GCWGC 4 cut(s) 994, 1290, 1353, 1795
ApoI RAATTY 3 cut(s) 662, 787, 1910
AseI ATTAAT 1 cut(s) 1839
Asp700I GAANNNNTTC 2 cut(s) 815, 1605
Asp718I GGTACC 1 cut(s) 1783
AspA2I CCTAGG 1 cut(s) 1904
AspLEI GCGC 3 cut(s) 198, 1346, 1928
AspS9I GGNCC 8 cut(s) 279, 736, 837, 856, 1142, 1169, 1464, 1939
AsuC2I CCSGG 4 cut(s) 277, 457, 515, 1410
AsuHPI GGTGA 5 cut(s) 383, 695, 736, 940, 1159
AvaI CYCGRG 2 cut(s) 1207, 1779
AvaII GGWCC 3 cut(s) 279, 856, 1169
AvrII CCTAGG 1 cut(s) 1904
BaeGI GKGCMC 1 cut(s) 575
BanI GGYRCC 4 cut(s) 656, 1279, 1327, 1783
BanII GRGCYC 1 cut(s) 291
BbsI GAAGAC 3 cut(s) 1069, 1656, 1826
Bbv12I GWGCWC 2 cut(s) 291, 1898
BbvI GCAGC 4 cut(s) 981, 1277, 1340, 1807
BceAI ACGGC 6 cut(s) 118, 139, 468, 756, 892, 1638
BciT130I CCWGG 4 cut(s) 241, 881, 1358, 1788
BcnI CCSGG 4 cut(s) 277, 457, 515, 1410
BcoDI GTCTC 3 cut(s) 1037, 1503, 1532
BfaI CTAG 2 cut(s) 72, 1905
BfmI CTRYAG 1 cut(s) 1006
BfuAI ACCTGC 1 cut(s) 765
BglI GCCNNNNNGGC 1 cut(s) 876
BisI GCNGC 6 cut(s) 106, 995, 1291, 1354, 1796, 1924
BlnI CCTAGG 1 cut(s) 1904
BlsI GCNGC 6 cut(s) 107, 996, 1292, 1355, 1797, 1925
Bme1390I CCNGG 8 cut(s) 241, 277, 457, 515, 881, 1358, 1410, 1788
Bme18I GGWCC 3 cut(s) 279, 856, 1169
BmeRI GACNNNNNGTC 1 cut(s) 1572
BmeT110I CYCGRG 2 cut(s) 1207, 1779
BmgT120I GGNCC 8 cut(s) 279, 736, 837, 856, 1142, 1169, 1464, 1939
BmrFI CCNGG 8 cut(s) 241, 277, 457, 515, 881, 1358, 1410, 1788
BmrI ACTGGG 2 cut(s) 496, 1600
BmsI GCATC 4 cut(s) 177, 273, 331, 1942
BmuI ACTGGG 2 cut(s) 496, 1600
BpiI GAAGAC 3 cut(s) 1069, 1656, 1826
BplI GAGNNNNNCTC 4 cut(s) 1512, 1544, 1880, 1912
BpuEI CTTGAG 1 cut(s) 275
BpuMI CCSGG 4 cut(s) 277, 457, 515, 1410
Bsa29I ATCGAT 1 cut(s) 447
BsaAI YACGTR 1 cut(s) 1162
BsaBI GATNNNNATC 1 cut(s) 465
BsaI GGTCTC 1 cut(s) 1037
BsaJI CCNNGG 7 cut(s) 29, 240, 282, 456, 519, 1778, 1904
Bsc4I CCNNNNNNNGG 7 cut(s) 145, 390, 520, 1054, 1128, 1409, 1922
Bse118I RCCGGY 1 cut(s) 1144
Bse1I ACTGG 3 cut(s) 502, 788, 1595
Bse3DI GCAATG 3 cut(s) 1065, 1404, 1418
Bse8I GATNNNNATC 1 cut(s) 465
BseBI CCWGG 4 cut(s) 241, 881, 1358, 1788
BseCI ATCGAT 1 cut(s) 447
BseDI CCNNGG 7 cut(s) 29, 240, 282, 456, 519, 1778, 1904
BseGI GGATG 4 cut(s) 466, 860, 979, 1568
BseJI GATNNNNATC 1 cut(s) 465
BseLI CCNNNNNNNGG 7 cut(s) 145, 390, 520, 1054, 1128, 1409, 1922
BseMI GCAATG 3 cut(s) 1065, 1404, 1418
BseMII CTCAG 1 cut(s) 1208
BseNI ACTGG 3 cut(s) 502, 788, 1595
BseRI GAGGAG 2 cut(s) 1904, 1946
BseSI GKGCMC 1 cut(s) 575
BseX3I CGGCCG 2 cut(s) 453, 769
BseXI GCAGC 4 cut(s) 981, 1277, 1340, 1807
BsgI GTGCAG 2 cut(s) 561, 743
Bsh1236I CGCG 2 cut(s) 196, 198
Bsh1285I CGRYCG 2 cut(s) 456, 772
BshNI GGYRCC 4 cut(s) 656, 1279, 1327, 1783
BshVI ATCGAT 1 cut(s) 447
BsiEI CGRYCG 2 cut(s) 456, 772
BsiHKAI GWGCWC 2 cut(s) 291, 1898
BsiHKCI CYCGRG 2 cut(s) 1207, 1779
BsiSI CCGG 6 cut(s) 146, 276, 456, 515, 1145, 1409
BslFI GGGAC 4 cut(s) 134, 415, 869, 1693
BslI CCNNNNNNNGG 7 cut(s) 145, 390, 520, 1054, 1128, 1409, 1922
BsmAI GTCTC 3 cut(s) 1037, 1503, 1532
BsmFI GGGAC 4 cut(s) 134, 415, 869, 1693
Bso31I GGTCTC 1 cut(s) 1037
BsoBI CYCGRG 2 cut(s) 1207, 1779
Bsp1286I GDGCHC 3 cut(s) 291, 575, 1898
Bsp1407I TGTACA 1 cut(s) 306
Bsp143I GATC 2 cut(s) 24, 685
BspACI CCGC 8 cut(s) 105, 143, 212, 1088, 1212, 1506, 1923, 2002
BspCNI CTCAG 1 cut(s) 1207
BspDI ATCGAT 1 cut(s) 447
BspFNI CGCG 2 cut(s) 196, 198
BspHI TCATGA 4 cut(s) 921, 1035, 1831, 1992
BspMI ACCTGC 1 cut(s) 765
BspPI GGATC 1 cut(s) 19
BspT107I GGYRCC 4 cut(s) 656, 1279, 1327, 1783
BspTNI GGTCTC 1 cut(s) 1037
BsrBI CCGCTC 2 cut(s) 1212, 1923
BsrDI GCAATG 3 cut(s) 1065, 1404, 1418
BsrFI RCCGGY 1 cut(s) 1144
BsrGI TGTACA 1 cut(s) 306
BsrI ACTGG 3 cut(s) 502, 788, 1595
BssAI RCCGGY 1 cut(s) 1144
BssECI CCNNGG 7 cut(s) 29, 240, 282, 456, 519, 1778, 1904
BssMI GATC 2 cut(s) 24, 685
BssNAI GTATAC 1 cut(s) 587
BssT1I CCWWGG 2 cut(s) 519, 1904
Bst1107I GTATAC 1 cut(s) 587
Bst2UI CCWGG 4 cut(s) 241, 881, 1358, 1788
Bst4CI ACNGT 3 cut(s) 92, 368, 1517
BstAPI GCANNNNNTGC 1 cut(s) 1341
BstAUI TGTACA 1 cut(s) 306
BstBAI YACGTR 1 cut(s) 1162
BstC8I GCNNGC 3 cut(s) 135, 262, 1214
BstDEI CTNAG 2 cut(s) 915, 1194
BstDSI CCRYGG 1 cut(s) 29
BstF5I GGATG 4 cut(s) 466, 860, 979, 1568
BstFNI CGCG 2 cut(s) 196, 198
BstHHI GCGC 3 cut(s) 198, 1346, 1928
BstKTI GATC 2 cut(s) 27, 688
BstMAI GTCTC 3 cut(s) 1037, 1503, 1532
BstMBI GATC 2 cut(s) 24, 685
BstMCI CGRYCG 2 cut(s) 456, 772
BstMWI GCNNNNNNNGC 5 cut(s) 350, 876, 1279, 1341, 1350
BstNI CCWGG 4 cut(s) 241, 881, 1358, 1788
BstNSI RCATGY 1 cut(s) 607
BstSCI CCNGG 8 cut(s) 239, 275, 455, 513, 879, 1356, 1408, 1786
BstSFI CTRYAG 1 cut(s) 1006
BstSLI GKGCMC 1 cut(s) 575
BstSNI TACGTA 1 cut(s) 1162
BstUI CGCG 2 cut(s) 196, 198
BstV1I GCAGC 4 cut(s) 981, 1277, 1340, 1807
BstV2I GAAGAC 3 cut(s) 1069, 1656, 1826
BstX2I RGATCY 1 cut(s) 24
BstYI RGATCY 1 cut(s) 24
BstZ17I GTATAC 1 cut(s) 587
BstZI CGGCCG 2 cut(s) 453, 769
Bsu15I ATCGAT 1 cut(s) 447
BsuTUI ATCGAT 1 cut(s) 447
BtgI CCRYGG 1 cut(s) 29
BtgZI GCGATG 2 cut(s) 123, 177
BtsCI GGATG 4 cut(s) 466, 860, 979, 1568
BtsI GCAGTG 1 cut(s) 1375
BtsIMutI CAGTG 3 cut(s) 781, 1375, 2008
BveI ACCTGC 1 cut(s) 765
Cac8I GCNNGC 3 cut(s) 135, 262, 1214
CaiI CAGNNNCTG 1 cut(s) 1723
CciI TCATGA 4 cut(s) 921, 1035, 1831, 1992
CfoI GCGC 3 cut(s) 198, 1346, 1928
Cfr10I RCCGGY 1 cut(s) 1144
Cfr13I GGNCC 8 cut(s) 279, 736, 837, 856, 1142, 1169, 1464, 1939
ClaI ATCGAT 1 cut(s) 447
Csp6I GTAC 3 cut(s) 307, 1666, 1784
CviQI GTAC 3 cut(s) 307, 1666, 1784
DdeI CTNAG 2 cut(s) 915, 1194
DpnI GATC 2 cut(s) 26, 687
DpnII GATC 2 cut(s) 24, 685
DrdI GACNNNNNNGTC 1 cut(s) 983
DriI GACNNNNNGTC 1 cut(s) 1572
DseDI GACNNNNNNGTC 1 cut(s) 983
EaeI YGGCCR 4 cut(s) 453, 516, 769, 877
EagI CGGCCG 2 cut(s) 453, 769
Eam1105I GACNNNNNGTC 1 cut(s) 1572
EciI GGCGGA 2 cut(s) 132, 1077
Ecl136II GAGCTC 1 cut(s) 289
EclXI CGGCCG 2 cut(s) 453, 769
Eco105I TACGTA 1 cut(s) 1162
Eco130I CCWWGG 2 cut(s) 519, 1904
Eco147I AGGCCT 1 cut(s) 239
Eco24I GRGCYC 1 cut(s) 291
Eco31I GGTCTC 1 cut(s) 1037
Eco47I GGWCC 3 cut(s) 279, 856, 1169
Eco52I CGGCCG 2 cut(s) 453, 769
Eco53kI GAGCTC 1 cut(s) 289
Eco57I CTGAAG 2 cut(s) 1202, 1297
Eco88I CYCGRG 2 cut(s) 1207, 1779
EcoICRI GAGCTC 1 cut(s) 289
EcoO109I RGGNCCY 3 cut(s) 279, 837, 856
EcoRI GAATTC 1 cut(s) 1910
EcoRII CCWGG 4 cut(s) 239, 879, 1356, 1786
EcoT14I CCWWGG 2 cut(s) 519, 1904
EcoT38I GRGCYC 1 cut(s) 291
ErhI CCWWGG 2 cut(s) 519, 1904
FalI AAGNNNNNCTT 4 cut(s) 1407, 1439, 1811, 1843
FaqI GGGAC 4 cut(s) 134, 415, 869, 1693
FauI CCCGC 1 cut(s) 1205
FblI GTMKAC 2 cut(s) 586, 1223
Fnu4HI GCNGC 6 cut(s) 106, 995, 1291, 1354, 1796, 1924
FokI GGATG 4 cut(s) 473, 847, 986, 1575
FriOI GRGCYC 1 cut(s) 291
Fsp4HI GCNGC 6 cut(s) 106, 995, 1291, 1354, 1796, 1924
FspBI CTAG 2 cut(s) 72, 1905
GlaI GCGC 3 cut(s) 197, 1345, 1927
GluI GCNGC 6 cut(s) 106, 995, 1291, 1354, 1796, 1924
HapII CCGG 6 cut(s) 146, 276, 456, 515, 1145, 1409
HhaI GCGC 3 cut(s) 198, 1346, 1928
Hin6I GCGC 3 cut(s) 196, 1344, 1926
HinP1I GCGC 3 cut(s) 196, 1344, 1926
HincII GTYRAC 2 cut(s) 556, 620
HindII GTYRAC 2 cut(s) 556, 620
HindIII AAGCTT 3 cut(s) 1082, 1458, 1496
HinfI GANTC 6 cut(s) 43, 472, 713, 1182, 1319, 1544
HpaII CCGG 6 cut(s) 146, 276, 456, 515, 1145, 1409
HphI GGTGA 5 cut(s) 383, 695, 736, 940, 1159
Hpy166II GTNNAC 9 cut(s) 364, 556, 587, 620, 1150, 1169, 1224, 1620, 1666
Hpy188I TCNGA 9 cut(s) 256, 286, 471, 825, 865, 989, 1181, 1549, 1725
Hpy8I GTNNAC 9 cut(s) 364, 556, 587, 620, 1150, 1169, 1224, 1620, 1666
Hpy99I CGWCG 1 cut(s) 1385
HpyAV CCTTC 4 cut(s) 487, 703, 964, 976
HpyCH4III ACNGT 3 cut(s) 92, 368, 1517
HpyCH4IV ACGT 4 cut(s) 185, 225, 1161, 1383
HpyCH4V TGCA 6 cut(s) 578, 760, 1235, 1241, 1260, 1335
HpyF10VI GCNNNNNNNGC 5 cut(s) 350, 876, 1279, 1341, 1350
HpyF3I CTNAG 2 cut(s) 915, 1194
HpySE526I ACGT 4 cut(s) 185, 225, 1161, 1383
HspAI GCGC 3 cut(s) 196, 1344, 1926
KflI GGGWCCC 1 cut(s) 856
KpnI GGTACC 1 cut(s) 1787
Kzo9I GATC 2 cut(s) 24, 685
LmnI GCTCC 5 cut(s) 33, 148, 286, 1074, 1131
Lsp1109I GCAGC 4 cut(s) 981, 1277, 1340, 1807
LweI GCATC 4 cut(s) 177, 273, 331, 1942
MaeI CTAG 2 cut(s) 72, 1905
MaeII ACGT 4 cut(s) 185, 225, 1161, 1383
MaeIII GTNAC 2 cut(s) 86, 742
MalI GATC 2 cut(s) 26, 687
MbiI CCGCTC 2 cut(s) 1212, 1923
MboI GATC 2 cut(s) 24, 685
MboII GAAGA 9 cut(s) 34, 163, 232, 313, 448, 820, 1069, 1661, 1831
MfeI CAATTG 2 cut(s) 1236, 1531
MflI RGATCY 1 cut(s) 24
MhlI GDGCHC 3 cut(s) 291, 575, 1898
MluCI AATT 9 cut(s) 488, 662, 787, 925, 1156, 1236, 1531, 1910, 1974
MlyI GAGTC 2 cut(s) 1328, 1538
MmeI TCCRAC 2 cut(s) 234, 967
MroXI GAANNNNTTC 2 cut(s) 815, 1605
MseI TTAA 4 cut(s) 486, 1587, 1815, 1839
MslI CAYNNNNRTG 2 cut(s) 865, 1830
MspI CCGG 6 cut(s) 146, 276, 456, 515, 1145, 1409
MspR9I CCNGG 8 cut(s) 241, 277, 457, 515, 881, 1358, 1410, 1788
MunI CAATTG 2 cut(s) 1236, 1531
MvaI CCWGG 4 cut(s) 241, 881, 1358, 1788
MvnI CGCG 2 cut(s) 196, 198
MwoI GCNNNNNNNGC 5 cut(s) 350, 876, 1279, 1341, 1350
NciI CCSGG 4 cut(s) 277, 457, 515, 1410
NdeII GATC 2 cut(s) 24, 685
NmeAIII GCCGAG 1 cut(s) 747
NmuCI GTSAC 1 cut(s) 742
NspI RCATGY 1 cut(s) 607
PagI TCATGA 4 cut(s) 921, 1035, 1831, 1992
PceI AGGCCT 1 cut(s) 239
PdmI GAANNNNTTC 2 cut(s) 815, 1605
PfeI GAWTC 4 cut(s) 43, 472, 713, 1182
PflFI GACNNNGTC 1 cut(s) 1694
PkrI GCNGC 6 cut(s) 107, 996, 1292, 1355, 1797, 1925
PleI GAGTC 2 cut(s) 1327, 1538
PpsI GAGTC 2 cut(s) 1327, 1538
Ppu21I YACGTR 1 cut(s) 1162
PpuMI RGGWCCY 2 cut(s) 279, 856
PshBI ATTAAT 1 cut(s) 1839
Psp124BI GAGCTC 1 cut(s) 291
Psp5II RGGWCCY 2 cut(s) 279, 856
Psp6I CCWGG 4 cut(s) 239, 879, 1356, 1786
PspGI CCWGG 4 cut(s) 239, 879, 1356, 1786
PspPI GGNCC 8 cut(s) 279, 736, 837, 856, 1142, 1169, 1464, 1939
PspPPI RGGWCCY 2 cut(s) 279, 856
PsrI GAACNNNNNNTAC 2 cut(s) 1142, 1174
PstNI CAGNNNCTG 1 cut(s) 1723
PsuI RGATCY 1 cut(s) 24
PsyI GACNNNGTC 1 cut(s) 1694
RsaI GTAC 3 cut(s) 308, 1667, 1785
RsaNI GTAC 3 cut(s) 307, 1666, 1784
RseI CAYNNNNRTG 2 cut(s) 865, 1830
SacI GAGCTC 1 cut(s) 291
SaqAI TTAA 4 cut(s) 486, 1587, 1815, 1839
SatI GCNGC 6 cut(s) 106, 995, 1291, 1354, 1796, 1924
Sau3AI GATC 2 cut(s) 24, 685
Sau96I GGNCC 8 cut(s) 279, 736, 837, 856, 1142, 1169, 1464, 1939
SchI GAGTC 2 cut(s) 1328, 1538
ScrFI CCNGG 8 cut(s) 241, 277, 457, 515, 881, 1358, 1410, 1788
SduI GDGCHC 3 cut(s) 291, 575, 1898
SfaNI GCATC 4 cut(s) 177, 273, 331, 1942
SfcI CTRYAG 1 cut(s) 1006
SinI GGWCC 3 cut(s) 279, 856, 1169
SmiMI CAYNNNNRTG 2 cut(s) 865, 1830
SmlI CTYRAG 1 cut(s) 290
SmoI CTYRAG 1 cut(s) 290
SnaBI TACGTA 1 cut(s) 1162
Sse9I AATT 9 cut(s) 488, 662, 787, 925, 1156, 1236, 1531, 1910, 1974
SseBI AGGCCT 1 cut(s) 239
SsiI CCGC 8 cut(s) 105, 143, 212, 1088, 1212, 1506, 1923, 2002
SspMI CTAG 2 cut(s) 72, 1905
SstI GAGCTC 1 cut(s) 291
StuI AGGCCT 1 cut(s) 239
StyD4I CCNGG 8 cut(s) 239, 275, 455, 513, 879, 1356, 1408, 1786
StyI CCWWGG 2 cut(s) 519, 1904
TaaI ACNGT 3 cut(s) 92, 368, 1517
TaiI ACGT 4 cut(s) 188, 228, 1164, 1386
TaqI TCGA 5 cut(s) 14, 325, 447, 750, 1185
TasI AATT 9 cut(s) 488, 662, 787, 925, 1156, 1236, 1531, 1910, 1974
TatI WGTACW 2 cut(s) 306, 1665
TauI GCSGC 2 cut(s) 108, 1926
TfiI GAWTC 4 cut(s) 43, 472, 713, 1182
Tru1I TTAA 4 cut(s) 486, 1587, 1815, 1839
Tru9I TTAA 4 cut(s) 486, 1587, 1815, 1839
TscAI CASTG 2 cut(s) 788, 1382
TseFI GTSAC 1 cut(s) 742
TseI GCWGC 4 cut(s) 994, 1290, 1353, 1795
Tsp45I GTSAC 1 cut(s) 742
TspGWI ACGGA 3 cut(s) 129, 376, 1029
TspRI CASTG 2 cut(s) 788, 1382
Tth111I GACNNNGTC 1 cut(s) 1694
VpaK11BI GGWCC 3 cut(s) 279, 856, 1169
VspI ATTAAT 1 cut(s) 1839
XapI RAATTY 3 cut(s) 662, 787, 1910
XceI RCATGY 1 cut(s) 607
XcmI CCANNNNNNNNNTGG 2 cut(s) 1125, 1611
XmaJI CCTAGG 1 cut(s) 1904
XmiI GTMKAC 2 cut(s) 586, 1223
XmnI GAANNNNTTC 2 cut(s) 815, 1605
XspI CTAG 2 cut(s) 72, 1905
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.