TMV resistance protein N-like
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000014343 |
| rosa_multiflora | Rmu_sc0000565.1_g000040 |
| rosa_roxburghii | Rroxscaffold_3G00228710 Rroxscaffold_7G00204260 Rroxscaffold_7G00204440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 782 |
| Acc36I | ACCTGC | 1 cut(s) | 2519 |
| AccB1I | GGYRCC | 1 cut(s) | 357 |
| AccBSI | CCGCTC | 1 cut(s) | 3742 |
| AccI | GTMKAC | 1 cut(s) | 2790 |
| AccII | CGCG | 3 cut(s) | 32, 5741, 5765 |
| AccIII | TCCGGA | 1 cut(s) | 4282 |
| AclWI | GGATC | 8 cut(s) | 25, 335, 348, 2726, 4116, 5400, 5413, 6049 |
| AcoI | YGGCCR | 2 cut(s) | 320, 715 |
| AcuI | CTGAAG | 6 cut(s) | 1704, 1878, 1983, 2157, 2262, 5588 |
| AcyI | GRCGYC | 1 cut(s) | 5979 |
| AdeI | CACNNNGTG | 2 cut(s) | 55, 3161 |
| AflIII | ACRYGT | 3 cut(s) | 924, 5739, 5795 |
| AhlI | ACTAGT | 4 cut(s) | 274, 1792, 2071, 2350 |
| AjnI | CCWGG | 7 cut(s) | 3229, 3715, 4630, 5343, 5516, 5884, 5954 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3326, 3358 |
| AleI | CACNNNNGTG | 1 cut(s) | 143 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 4626, 4658 |
| Alw21I | GWGCWC | 1 cut(s) | 1065 |
| Alw26I | GTCTC | 8 cut(s) | 597, 3182, 4305, 4507, 4579, 4793, 4944, 5622 |
| AlwI | GGATC | 8 cut(s) | 25, 335, 348, 2726, 4116, 5400, 5413, 6049 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 4516, 4766 |
| Ama87I | CYCGRG | 1 cut(s) | 6084 |
| Aor13HI | TCCGGA | 1 cut(s) | 4282 |
| AseI | ATTAAT | 2 cut(s) | 3417, 4682 |
| Asp700I | GAANNNNTTC | 7 cut(s) | 276, 863, 1308, 1421, 3297, 4374, 5294 |
| AspLEI | GCGC | 3 cut(s) | 34, 116, 5004 |
| AspS9I | GGNCC | 5 cut(s) | 3515, 3619, 3703, 5020, 5752 |
| AsuC2I | CCSGG | 3 cut(s) | 43, 2736, 3860 |
| AsuII | TTCGAA | 1 cut(s) | 5358 |
| AvaI | CYCGRG | 1 cut(s) | 6084 |
| AvaII | GGWCC | 4 cut(s) | 3515, 3619, 3703, 5020 |
| AxyI | CCTNAGG | 1 cut(s) | 5474 |
| BaeGI | GKGCMC | 1 cut(s) | 5381 |
| BalI | TGGCCA | 2 cut(s) | 322, 717 |
| BamHI | GGATCC | 2 cut(s) | 340, 5405 |
| BanI | GGYRCC | 1 cut(s) | 357 |
| BanII | GRGCYC | 1 cut(s) | 1065 |
| BauI | CACGAG | 1 cut(s) | 594 |
| BbsI | GAAGAC | 3 cut(s) | 686, 2891, 5904 |
| Bbv12I | GWGCWC | 1 cut(s) | 1065 |
| BceAI | ACGGC | 5 cut(s) | 793, 1934, 2213, 3675, 5990 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 5407, 5441 |
| BciT130I | CCWGG | 7 cut(s) | 3231, 3717, 4632, 5345, 5518, 5886, 5956 |
| BciVI | GTATCC | 2 cut(s) | 3575, 5492 |
| BclI | TGATCA | 3 cut(s) | 3163, 3364, 4482 |
| BcnI | CCSGG | 3 cut(s) | 43, 2736, 3860 |
| BcoDI | GTCTC | 8 cut(s) | 597, 3182, 4305, 4507, 4579, 4793, 4944, 5622 |
| BcuI | ACTAGT | 4 cut(s) | 274, 1792, 2071, 2350 |
| BfmI | CTRYAG | 5 cut(s) | 88, 1215, 2683, 4660, 4758 |
| BfuAI | ACCTGC | 1 cut(s) | 2519 |
| BfuI | GTATCC | 2 cut(s) | 3575, 5492 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 1673, 3576 |
| BglII | AGATCT | 3 cut(s) | 2667, 3685, 6073 |
| BmcAI | AGTACT | 2 cut(s) | 1407, 5261 |
| Bme18I | GGWCC | 4 cut(s) | 3515, 3619, 3703, 5020 |
| BmeT110I | CYCGRG | 1 cut(s) | 6084 |
| BmgT120I | GGNCC | 5 cut(s) | 3515, 3619, 3703, 5020, 5752 |
| BmrI | ACTGGG | 1 cut(s) | 5923 |
| BmsI | GCATC | 8 cut(s) | 257, 1117, 1443, 2798, 3289, 3671, 3968, 5427 |
| BmuI | ACTGGG | 1 cut(s) | 5923 |
| BoxI | GACNNNNGTC | 1 cut(s) | 3966 |
| BpiI | GAAGAC | 3 cut(s) | 686, 2891, 5904 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 205, 237, 430, 462 |
| BpmI | CTGGAG | 2 cut(s) | 4079, 4238 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2781, 4380 |
| Bpu14I | TTCGAA | 1 cut(s) | 5358 |
| BpuEI | CTTGAG | 3 cut(s) | 1128, 1250, 3985 |
| BpuMI | CCSGG | 3 cut(s) | 43, 2736, 3860 |
| BsaBI | GATNNNNATC | 3 cut(s) | 903, 2100, 2379 |
| BsaHI | GRCGYC | 1 cut(s) | 5979 |
| BsaI | GGTCTC | 1 cut(s) | 4579 |
| BsaJI | CCNNGG | 8 cut(s) | 765, 2735, 4351, 4990, 5343, 5381, 5517, 5763 |
| BsaWI | WCCGGW | 1 cut(s) | 4282 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 3100, 3130, 5766, 5796 |
| Bse118I | RCCGGY | 2 cut(s) | 5642, 5874 |
| Bse1I | ACTGG | 3 cut(s) | 123, 3380, 5918 |
| Bse21I | CCTNAGG | 1 cut(s) | 5474 |
| Bse3DI | GCAATG | 3 cut(s) | 1211, 1317, 4817 |
| Bse8I | GATNNNNATC | 3 cut(s) | 903, 2100, 2379 |
| BseAI | TCCGGA | 1 cut(s) | 4282 |
| BseBI | CCWGG | 7 cut(s) | 3231, 3717, 4632, 5345, 5518, 5886, 5956 |
| BseDI | CCNNGG | 8 cut(s) | 765, 2735, 4351, 4990, 5343, 5381, 5517, 5763 |
| BseJI | GATNNNNATC | 3 cut(s) | 903, 2100, 2379 |
| BseMI | GCAATG | 3 cut(s) | 1211, 1317, 4817 |
| BseNI | ACTGG | 3 cut(s) | 123, 3380, 5918 |
| BseRI | GAGGAG | 2 cut(s) | 183, 6047 |
| BseSI | GKGCMC | 1 cut(s) | 5381 |
| BseYI | CCCAGC | 1 cut(s) | 1663 |
| BsgI | GTGCAG | 2 cut(s) | 519, 5158 |
| Bsh1236I | CGCG | 3 cut(s) | 32, 5741, 5765 |
| Bsh1285I | CGRYCG | 3 cut(s) | 4865, 5976, 6104 |
| BshNI | GGYRCC | 1 cut(s) | 357 |
| BsiEI | CGRYCG | 3 cut(s) | 4865, 5976, 6104 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1065 |
| BsiHKCI | CYCGRG | 1 cut(s) | 6084 |
| BsiSI | CCGG | 8 cut(s) | 43, 2460, 2735, 3106, 3860, 4283, 5643, 5875 |
| BslFI | GGGAC | 3 cut(s) | 5572, 5924, 6035 |
| BsmAI | GTCTC | 8 cut(s) | 597, 3182, 4305, 4507, 4579, 4793, 4944, 5622 |
| BsmFI | GGGAC | 3 cut(s) | 5572, 5924, 6035 |
| BsmI | GAATGC | 3 cut(s) | 3794, 4059, 4097 |
| Bso31I | GGTCTC | 1 cut(s) | 4579 |
| BsoBI | CYCGRG | 1 cut(s) | 6084 |
| Bsp119I | TTCGAA | 1 cut(s) | 5358 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1065, 5381 |
| Bsp13I | TCCGGA | 1 cut(s) | 4282 |
| Bsp1407I | TGTACA | 3 cut(s) | 108, 598, 3908 |
| Bsp19I | CCATGG | 2 cut(s) | 765, 5381 |
| BspEI | TCCGGA | 1 cut(s) | 4282 |
| BspFNI | CGCG | 3 cut(s) | 32, 5741, 5765 |
| BspHI | TCATGA | 1 cut(s) | 1048 |
| BspMAI | CTGCAG | 2 cut(s) | 1219, 4762 |
| BspMI | ACCTGC | 1 cut(s) | 2519 |
| BspPI | GGATC | 8 cut(s) | 25, 335, 348, 2726, 4116, 5400, 5413, 6049 |
| BspQI | GCTCTTC | 1 cut(s) | 1070 |
| BspT104I | TTCGAA | 1 cut(s) | 5358 |
| BspT107I | GGYRCC | 1 cut(s) | 357 |
| BspTNI | GGTCTC | 1 cut(s) | 4579 |
| BsrBI | CCGCTC | 1 cut(s) | 3742 |
| BsrDI | GCAATG | 3 cut(s) | 1211, 1317, 4817 |
| BsrFI | RCCGGY | 2 cut(s) | 5642, 5874 |
| BsrGI | TGTACA | 3 cut(s) | 108, 598, 3908 |
| BsrI | ACTGG | 3 cut(s) | 123, 3380, 5918 |
| BssAI | RCCGGY | 2 cut(s) | 5642, 5874 |
| BssECI | CCNNGG | 8 cut(s) | 765, 2735, 4351, 4990, 5343, 5381, 5517, 5763 |
| BssNI | GRCGYC | 1 cut(s) | 5979 |
| BssSI | CACGAG | 1 cut(s) | 594 |
| BssT1I | CCWWGG | 3 cut(s) | 765, 4990, 5381 |
| Bst2BI | CACGAG | 1 cut(s) | 594 |
| Bst2UI | CCWGG | 7 cut(s) | 3231, 3717, 4632, 5345, 5518, 5886, 5956 |
| Bst6I | CTCTTC | 9 cut(s) | 160, 519, 1070, 1434, 3185, 3214, 4164, 4308, 5343 |
| BstACI | GRCGYC | 1 cut(s) | 5979 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1462 |
| BstAUI | TGTACA | 3 cut(s) | 108, 598, 3908 |
| BstBI | TTCGAA | 1 cut(s) | 5358 |
| BstC8I | GCNNGC | 9 cut(s) | 999, 1151, 1212, 1564, 2484, 2616, 3260, 4067, 5201 |
| BstDSI | CCRYGG | 4 cut(s) | 765, 4351, 5381, 5763 |
| BstEII | GGTNACC | 1 cut(s) | 1500 |
| BstFNI | CGCG | 3 cut(s) | 32, 5741, 5765 |
| BstHHI | GCGC | 3 cut(s) | 34, 116, 5004 |
| BstMAI | GTCTC | 8 cut(s) | 597, 3182, 4305, 4507, 4579, 4793, 4944, 5622 |
| BstMCI | CGRYCG | 3 cut(s) | 4865, 5976, 6104 |
| BstNI | CCWGG | 7 cut(s) | 3231, 3717, 4632, 5345, 5518, 5886, 5956 |
| BstNSI | RCATGY | 2 cut(s) | 1576, 5799 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 3966 |
| BstPI | GGTNACC | 1 cut(s) | 1500 |
| BstSFI | CTRYAG | 5 cut(s) | 88, 1215, 2683, 4660, 4758 |
| BstSLI | GKGCMC | 1 cut(s) | 5381 |
| BstUI | CGCG | 3 cut(s) | 32, 5741, 5765 |
| BstV2I | GAAGAC | 3 cut(s) | 686, 2891, 5904 |
| BstX2I | RGATCY | 7 cut(s) | 340, 2667, 3685, 4108, 5405, 6041, 6073 |
| BstYI | RGATCY | 7 cut(s) | 340, 2667, 3685, 4108, 5405, 6041, 6073 |
| Bsu36I | CCTNAGG | 1 cut(s) | 5474 |
| BsuI | GTATCC | 2 cut(s) | 3575, 5492 |
| BtgI | CCRYGG | 4 cut(s) | 765, 4351, 5381, 5763 |
| BtsI | GCAGTG | 3 cut(s) | 2463, 4119, 6043 |
| BtsIMutI | CAGTG | 9 cut(s) | 116, 1021, 2463, 3155, 3373, 3782, 4119, 5664, 6043 |
| BveI | ACCTGC | 1 cut(s) | 2519 |
| Cac8I | GCNNGC | 9 cut(s) | 999, 1151, 1212, 1564, 2484, 2616, 3260, 4067, 5201 |
| CaiI | CAGNNNCTG | 2 cut(s) | 4516, 4766 |
| CciI | TCATGA | 1 cut(s) | 1048 |
| CfoI | GCGC | 3 cut(s) | 34, 116, 5004 |
| Cfr10I | RCCGGY | 2 cut(s) | 5642, 5874 |
| Cfr13I | GGNCC | 5 cut(s) | 3515, 3619, 3703, 5020, 5752 |
| Cfr42I | CCGCGG | 1 cut(s) | 5766 |
| CseI | GACGC | 4 cut(s) | 3521, 5730, 5747, 5968 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 2089, 2124, 2368, 2403, 3595, 3630 |
| DraI | TTTAAA | 3 cut(s) | 1074, 4042, 4182 |
| DraIII | CACNNNGTG | 2 cut(s) | 55, 3161 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 782 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 782 |
| EaeI | YGGCCR | 2 cut(s) | 320, 715 |
| Eam1104I | CTCTTC | 9 cut(s) | 160, 519, 1070, 1434, 3185, 3214, 4164, 4308, 5343 |
| EarI | CTCTTC | 9 cut(s) | 160, 519, 1070, 1434, 3185, 3214, 4164, 4308, 5343 |
| EciI | GGCGGA | 1 cut(s) | 3557 |
| Ecl136II | GAGCTC | 1 cut(s) | 1063 |
| Eco130I | CCWWGG | 3 cut(s) | 765, 4990, 5381 |
| Eco147I | AGGCCT | 4 cut(s) | 1149, 1421, 1676, 2745 |
| Eco24I | GRGCYC | 1 cut(s) | 1065 |
| Eco31I | GGTCTC | 1 cut(s) | 4579 |
| Eco32I | GATATC | 5 cut(s) | 1819, 2098, 2377, 4154, 4837 |
| Eco47I | GGWCC | 4 cut(s) | 3515, 3619, 3703, 5020 |
| Eco53kI | GAGCTC | 1 cut(s) | 1063 |
| Eco57I | CTGAAG | 6 cut(s) | 1704, 1878, 1983, 2157, 2262, 5588 |
| Eco81I | CCTNAGG | 1 cut(s) | 5474 |
| Eco88I | CYCGRG | 1 cut(s) | 6084 |
| Eco91I | GGTNACC | 1 cut(s) | 1500 |
| EcoICRI | GAGCTC | 1 cut(s) | 1063 |
| EcoO109I | RGGNCCY | 2 cut(s) | 3703, 5752 |
| EcoO65I | GGTNACC | 1 cut(s) | 1500 |
| EcoRI | GAATTC | 3 cut(s) | 760, 879, 4613 |
| EcoRII | CCWGG | 7 cut(s) | 3229, 3715, 4630, 5343, 5516, 5884, 5954 |
| EcoRV | GATATC | 5 cut(s) | 1819, 2098, 2377, 4154, 4837 |
| EcoT14I | CCWWGG | 3 cut(s) | 765, 4990, 5381 |
| EcoT22I | ATGCAT | 2 cut(s) | 250, 1458 |
| EcoT38I | GRGCYC | 1 cut(s) | 1065 |
| ErhI | CCWWGG | 3 cut(s) | 765, 4990, 5381 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1406, 1438, 1431, 1463 |
| FaqI | GGGAC | 3 cut(s) | 5572, 5924, 6035 |
| FauI | CCCGC | 3 cut(s) | 5260, 5758, 6023 |
| FauNDI | CATATG | 4 cut(s) | 720, 3326, 5228, 5364 |
| FbaI | TGATCA | 3 cut(s) | 3163, 3364, 4482 |
| FblI | GTMKAC | 1 cut(s) | 2790 |
| FriOI | GRGCYC | 1 cut(s) | 1065 |
| GlaI | GCGC | 3 cut(s) | 33, 115, 5003 |
| GsaI | CCCAGC | 1 cut(s) | 1667 |
| GsuI | CTGGAG | 2 cut(s) | 4079, 4238 |
| HapII | CCGG | 8 cut(s) | 43, 2460, 2735, 3106, 3860, 4283, 5643, 5875 |
| HgaI | GACGC | 4 cut(s) | 3521, 5730, 5747, 5968 |
| HhaI | GCGC | 3 cut(s) | 34, 116, 5004 |
| Hin1I | GRCGYC | 1 cut(s) | 5979 |
| Hin6I | GCGC | 3 cut(s) | 32, 114, 5002 |
| HinP1I | GCGC | 3 cut(s) | 32, 114, 5002 |
| HincII | GTYRAC | 5 cut(s) | 2926, 3592, 3961, 5224, 5442 |
| HindII | GTYRAC | 5 cut(s) | 2926, 3592, 3961, 5224, 5442 |
| HindIII | AAGCTT | 9 cut(s) | 1053, 1445, 1512, 1739, 2018, 2297, 2612, 5011, 5197 |
| HpaI | GTTAAC | 1 cut(s) | 5442 |
| HpaII | CCGG | 8 cut(s) | 43, 2460, 2735, 3106, 3860, 4283, 5643, 5875 |
| Hpy99I | CGWCG | 1 cut(s) | 5984 |
| HpyCH4IV | ACGT | 3 cut(s) | 926, 3995, 4030 |
| HpySE526I | ACGT | 3 cut(s) | 926, 3995, 4030 |
| Hsp92I | GRCGYC | 1 cut(s) | 5979 |
| HspAI | GCGC | 3 cut(s) | 32, 114, 5002 |
| Kpn2I | TCCGGA | 1 cut(s) | 4282 |
| Ksp22I | TGATCA | 3 cut(s) | 3163, 3364, 4482 |
| KspAI | GTTAAC | 1 cut(s) | 5442 |
| KspI | CCGCGG | 1 cut(s) | 5766 |
| LguI | GCTCTTC | 1 cut(s) | 1070 |
| LmnI | GCTCC | 4 cut(s) | 3739, 5894, 6033, 6060 |
| LweI | GCATC | 8 cut(s) | 257, 1117, 1443, 2798, 3289, 3671, 3968, 5427 |
| MaeII | ACGT | 3 cut(s) | 926, 3995, 4030 |
| MbiI | CCGCTC | 1 cut(s) | 3742 |
| MfeI | CAATTG | 9 cut(s) | 201, 687, 908, 1119, 2487, 4504, 4830, 5844, 5965 |
| MflI | RGATCY | 7 cut(s) | 340, 2667, 3685, 4108, 5405, 6041, 6073 |
| MhlI | GDGCHC | 2 cut(s) | 1065, 5381 |
| MlsI | TGGCCA | 2 cut(s) | 322, 717 |
| MluI | ACGCGT | 1 cut(s) | 5739 |
| MluNI | TGGCCA | 2 cut(s) | 322, 717 |
| MmeI | TCCRAC | 8 cut(s) | 1559, 1705, 1984, 2263, 3428, 3785, 3919, 4086 |
| Mox20I | TGGCCA | 2 cut(s) | 322, 717 |
| Mph1103I | ATGCAT | 2 cut(s) | 250, 1458 |
| MroI | TCCGGA | 1 cut(s) | 4282 |
| MroXI | GAANNNNTTC | 7 cut(s) | 276, 863, 1308, 1421, 3297, 4374, 5294 |
| MscI | TGGCCA | 2 cut(s) | 322, 717 |
| MslI | CAYNNNNRTG | 4 cut(s) | 143, 561, 1185, 3799 |
| Msp20I | TGGCCA | 2 cut(s) | 322, 717 |
| MspA1I | CMGCKG | 5 cut(s) | 1569, 2479, 4659, 4763, 5765 |
| MspI | CCGG | 8 cut(s) | 43, 2460, 2735, 3106, 3860, 4283, 5643, 5875 |
| MunI | CAATTG | 9 cut(s) | 201, 687, 908, 1119, 2487, 4504, 4830, 5844, 5965 |
| Mva1269I | GAATGC | 3 cut(s) | 3794, 4059, 4097 |
| MvaI | CCWGG | 7 cut(s) | 3231, 3717, 4632, 5345, 5518, 5886, 5956 |
| MvnI | CGCG | 3 cut(s) | 32, 5741, 5765 |
| NciI | CCSGG | 3 cut(s) | 43, 2736, 3860 |
| NcoI | CCATGG | 2 cut(s) | 765, 5381 |
| NdeI | CATATG | 4 cut(s) | 720, 3326, 5228, 5364 |
| NmuCI | GTSAC | 8 cut(s) | 1354, 1500, 1766, 2045, 3116, 4520, 4855, 5735 |
| NsiI | ATGCAT | 2 cut(s) | 250, 1458 |
| NspI | RCATGY | 2 cut(s) | 1576, 5799 |
| NspV | TTCGAA | 1 cut(s) | 5358 |
| OliI | CACNNNNGTG | 1 cut(s) | 143 |
| PaeR7I | CTCGAG | 1 cut(s) | 6084 |
| PagI | TCATGA | 1 cut(s) | 1048 |
| PceI | AGGCCT | 4 cut(s) | 1149, 1421, 1676, 2745 |
| PciI | ACATGT | 1 cut(s) | 5795 |
| PciSI | GCTCTTC | 1 cut(s) | 1070 |
| PctI | GAATGC | 3 cut(s) | 3794, 4059, 4097 |
| PdmI | GAANNNNTTC | 7 cut(s) | 276, 863, 1308, 1421, 3297, 4374, 5294 |
| PfoI | TCCNGGA | 3 cut(s) | 3229, 3858, 4630 |
| Ple19I | CGATCG | 3 cut(s) | 4865, 5976, 6104 |
| PpuMI | RGGWCCY | 1 cut(s) | 3703 |
| PscI | ACATGT | 1 cut(s) | 5795 |
| PshAI | GACNNNNGTC | 1 cut(s) | 3966 |
| PshBI | ATTAAT | 2 cut(s) | 3417, 4682 |
| Psp124BI | GAGCTC | 1 cut(s) | 1065 |
| Psp5II | RGGWCCY | 1 cut(s) | 3703 |
| Psp6I | CCWGG | 7 cut(s) | 3229, 3715, 4630, 5343, 5516, 5884, 5954 |
| PspEI | GGTNACC | 1 cut(s) | 1500 |
| PspFI | CCCAGC | 1 cut(s) | 1663 |
| PspGI | CCWGG | 7 cut(s) | 3229, 3715, 4630, 5343, 5516, 5884, 5954 |
| PspPI | GGNCC | 5 cut(s) | 3515, 3619, 3703, 5020, 5752 |
| PspPPI | RGGWCCY | 1 cut(s) | 3703 |
| PspXI | VCTCGAGB | 1 cut(s) | 6084 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 6000, 6032 |
| PstI | CTGCAG | 2 cut(s) | 1219, 4762 |
| PstNI | CAGNNNCTG | 2 cut(s) | 4516, 4766 |
| PsuI | RGATCY | 7 cut(s) | 340, 2667, 3685, 4108, 5405, 6041, 6073 |
| PvuI | CGATCG | 3 cut(s) | 4865, 5976, 6104 |
| PvuII | CAGCTG | 4 cut(s) | 1569, 2479, 4659, 4763 |
| RseI | CAYNNNNRTG | 4 cut(s) | 143, 561, 1185, 3799 |
| SacI | GAGCTC | 1 cut(s) | 1065 |
| SacII | CCGCGG | 1 cut(s) | 5766 |
| SapI | GCTCTTC | 1 cut(s) | 1070 |
| Sau96I | GGNCC | 5 cut(s) | 3515, 3619, 3703, 5020, 5752 |
| ScaI | AGTACT | 2 cut(s) | 1407, 5261 |
| SduI | GDGCHC | 2 cut(s) | 1065, 5381 |
| SfaNI | GCATC | 8 cut(s) | 257, 1117, 1443, 2798, 3289, 3671, 3968, 5427 |
| SfcI | CTRYAG | 5 cut(s) | 88, 1215, 2683, 4660, 4758 |
| Sfr274I | CTCGAG | 1 cut(s) | 6084 |
| Sfr303I | CCGCGG | 1 cut(s) | 5766 |
| SfuI | TTCGAA | 1 cut(s) | 5358 |
| SgrBI | CCGCGG | 1 cut(s) | 5766 |
| SinI | GGWCC | 4 cut(s) | 3515, 3619, 3703, 5020 |
| SlaI | CTCGAG | 1 cut(s) | 6084 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 143, 561, 1185, 3799 |
| SmlI | CTYRAG | 4 cut(s) | 1143, 1265, 3964, 6084 |
| SmoI | CTYRAG | 4 cut(s) | 1143, 1265, 3964, 6084 |
| SpeI | ACTAGT | 4 cut(s) | 274, 1792, 2071, 2350 |
| SseBI | AGGCCT | 4 cut(s) | 1149, 1421, 1676, 2745 |
| SspI | AATATT | 4 cut(s) | 831, 1394, 2632, 4558 |
| SstI | GAGCTC | 1 cut(s) | 1065 |
| StuI | AGGCCT | 4 cut(s) | 1149, 1421, 1676, 2745 |
| StyI | CCWWGG | 3 cut(s) | 765, 4990, 5381 |
| TaiI | ACGT | 3 cut(s) | 929, 3998, 4033 |
| TatI | WGTACW | 7 cut(s) | 108, 598, 1132, 1405, 3908, 5259, 5494 |
| TauI | GCSGC | 1 cut(s) | 5765 |
| TscAI | CASTG | 9 cut(s) | 123, 1021, 2470, 3162, 3380, 3789, 4126, 5664, 6043 |
| TseFI | GTSAC | 8 cut(s) | 1354, 1500, 1766, 2045, 3116, 4520, 4855, 5735 |
| Tsp45I | GTSAC | 8 cut(s) | 1354, 1500, 1766, 2045, 3116, 4520, 4855, 5735 |
| TspGWI | ACGGA | 2 cut(s) | 3507, 4340 |
| TspRI | CASTG | 9 cut(s) | 123, 1021, 2470, 3162, 3380, 3789, 4126, 5664, 6043 |
| VpaK11BI | GGWCC | 4 cut(s) | 3515, 3619, 3703, 5020 |
| VspI | ATTAAT | 2 cut(s) | 3417, 4682 |
| XbaI | TCTAGA | 2 cut(s) | 619, 742 |
| XceI | RCATGY | 2 cut(s) | 1576, 5799 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 725, 2994 |
| XhoI | CTCGAG | 1 cut(s) | 6084 |
| XmiI | GTMKAC | 1 cut(s) | 2790 |
| XmnI | GAANNNNTTC | 7 cut(s) | 276, 863, 1308, 1421, 3297, 4374, 5294 |
| ZrmI | AGTACT | 2 cut(s) | 1407, 5261 |
| Zsp2I | ATGCAT | 2 cut(s) | 250, 1458 |