Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000632.1

Orthogroup ID

OG0005454

Physical Location & Seq

Genomic Coordinates Forward (+)

6817 .. 19679

Gene Structure 12863 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000632.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2496 bp

atggaggcaagcaaggaagagtttctcagagagttcggggagcactatggataccccagtggccccaaatccatcgaagaaatccgagcaaccgagtttaagcgattagatggaaatgtgtacttggatcatgctggggctactttgtactctgagttgcagctggaagctatctttaaggatttaaatgccaatgtgtatggaaacccacatagtcaaagtgataccagttctgccacaagtgacattgtaagggaagcccgccaacaggtcctcgactactgtaaagcatcaccaaaagaatacagctgcatattcacttctggggcaacagctgcactgaagcttgtaggggaggcctttccttggagctctcacagctgttttacatacacgacagagaatcacaacagtgtccttgggattagagaatatgctcttggtcaaggcgctgcagcctctgcaatagatattgaagagcatgtgcatcatggagtatcaggtggtagtgtaccatccatgagggtcttgcagcacgaagtacagagaagaaataaagctagatctatggaggaggaaccaacaggtggtgcatataacttattcgctttcccgtcagagtgcaatttctcaggattacgattcagccttgacttggtgaagattatcaaagacgatcccaaaagaattatggaaggctctccattttgcaatggccgctggatggtcttgattgatgctgcaaaaggatatgccacagaaccaccagatttatcactgtatccggcagattttgttgttatatctttctataagctatttggttatccaactggacttggcgcactcattgctcgaaatgatgctgctagagtactgaagaaaacttacttcagtggaggtacagttgctgcctcaattgctgacatcgacttcgttaaaagaagaaaaagtgtggaagagctgtttgaggatggcaccatttcatacctgagcatagcatctattcaacatgggttcaaaattctgaattcactgactgtgtctgccatatctcggcatacagcatcacttgccttgtatgtaaggaagaagctcctggctttgaggcatgaaaatggagccaaggtttgcacactttatggcatgtcaaaggcgttatgtcgtggatttggtccaacagtctcattcaacttgaaaaggtcggatggcacttggtatggataccgtgaagttgaaaaactggcatctttatctggaattcagttacggacaggatgcttttgcaatcccggtgcatgtgctaaatatctaggcttgtctcactctgaacttctttcaaacattgaggctggccatgtttgctgggatgataatgacattattcatggaaaacctacaggagctgtgagagtatcctttggttatatgtcaacatttgaagatgttaagatatttattgattttgtgacaagttcctttgtagcattatcaaatgggactggaaatgggtatcaaataaagcaaggtcctgaaagcagattagaggcaggaagttactctttgaagtctgttactatctacccaataaaatcatgtgcaggattcaatgtggaaagttggcctctgagcagttctggtctgcgtcatgatcgggaatgggttcttacaagcctaagtggtgaaatccttacacaaaagaaggtccctgaaatgtgcttcataagtacttttattgacctcaataagggaatattgtttgtcgagtcaccccgatgccaagtgagactgcccatcaactttatgttaaattcatgtaatggtgggagagaagagattaatttacatggccagagatatgaagtacaagcttacgaaaaggaaatcaacatgtggtttagcaatgccattggtcgcccatgcaccttattacgtcgttttagttcaaattacaacctttgcttgaataagagcaaaagtacagacatgtgcagaaggatggagggcatgttgaatttttctaatgaagctcctccaatgagatttcggcccaaccttgtcatatctggtggtgaaccatatgctgaagatggatggagaaaccttaaaattgggaatatgtatttcacatccttgggcggatgcaaccgttgtcagatgatcaacattgttgatgaagctggacaagtgcggaagtcaaatgaacctttggtgactctagcatcatataggagagtcaagggaaagatcttgtttgggatactgctgaaatatgaaaaaagcattgtagggtgggatggcgacgacaaagatgatgatttgtggcttcaaagaaagaagtcattggagactttgcttgactccggtggtggactccggcgacttgtaacccgactccggcgaccggtgaccagaatccggcgaccaatcactggaatccagaatccggcgaccaatcactggaatccagaatccggctaccagactgatgactag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006066 GO:0006082 GO:0006464 GO:0006605 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006807 GO:0006810 GO:0006886 GO:0006950 GO:0006952 GO:0006970 GO:0007154 GO:0007165 GO:0008104 GO:0008150 GO:0008152 GO:0008265 GO:0008299 GO:0008610 GO:0009000 GO:0009058 GO:0009266 GO:0009408 GO:0009409 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009651 GO:0009687 GO:0009688 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009743 GO:0009755 GO:0009756 GO:0009987 GO:0010033 GO:0010118 GO:0010182 GO:0015031 GO:0015833 GO:0016053 GO:0016106 GO:0016114 GO:0016740 GO:0016782 GO:0016783 GO:0016829 GO:0016846 GO:0017038 GO:0018315 GO:0019538 GO:0019752 GO:0023052 GO:0032787 GO:0032870 GO:0033036 GO:0033365 GO:0034613 GO:0036211 GO:0042040 GO:0042221 GO:0042742 GO:0042886 GO:0043170 GO:0043207 GO:0043288 GO:0043289 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0045036 GO:0045037 GO:0045184 GO:0046165 GO:0046394 GO:0046907 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051704 GO:0051707 GO:0051716 GO:0055085 GO:0065002 GO:0065007 GO:0070727 GO:0070887 GO:0071310 GO:0071322 GO:0071365 GO:0071495 GO:0071702 GO:0071704 GO:0071705 GO:0071806 GO:0072330 GO:0072594 GO:0072596 GO:0072598 GO:0098542 GO:1901564 GO:1901576 GO:1901615 GO:1901617 GO:1901700 GO:1901701 GO:1902644 GO:1902645

KEGG Pathways

Metabolic & Signaling

ko00790 map00790

Pfam Domains

Protein Families

Aminotran_5 MOSC MOSC_N

Protein Analysis

831

Amino Acids

92.63

Weight (kDa)

8.41

Isoelectric Point (pI)

41.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005454)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16540 AT1G16540 AT1G16540
fragaria_vesca	FvH4_3g15600 FvH4_3g15600 FvH4_3g15600 FvH4_3g15600
malus_domestica	MD05G1221200.v1.1
prunus_persica	Prupe.4G138400_v2.0.a1 Prupe.4G138400_v2.0.a1 Prupe.4G138400_v2.0.a1 Prupe.4G138400_v2.0.a1 Prupe.4G138400_v2.0.a1 Prupe.4G138400_v2.0.a1 Prupe.4G138400_v2.0.a1 Prupe.4G138400_v2.0.a1 Prupe.4G138400_v2.0.a1 Prupe.4G138400_v2.0.a1
pyrus_communis	pycom05g20450
rosa_chinensis	RchiOBHm_Chr5g0026221
rosa_laevigata	RLG00000032914
rosa_multiflora	Rmu_sc0000632.1_g000002
rosa_roxburghii	Rroxscaffold_1G00053090
rosa_rugosa	Rorug05G0091600
rosa_samantha	Rh5AG184600 Rh5BG181500 Rh5CG200700 Rh5DG183200
rosa_wichuraiana	Rw5G016740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	977
AccB7I	CCANNNNNTGG	3 cut(s)	587, 2432, 2460
AciI	CCGC	4 cut(s)	262, 718, 2139, 2191
AclWI	GGATC	2 cut(s)	135, 671
AcoI	YGGCCR	3 cut(s)	715, 1354, 1849
AcsI	RAATTY	5 cut(s)	1023, 1030, 1260, 1810, 2014
AcuI	CTGAAG	4 cut(s)	362, 877, 899, 2106
AfaI	GTAC	9 cut(s)	122, 149, 513, 543, 876, 904, 1729, 1866, 1981
AflIII	ACRYGT	2 cut(s)	1890, 1986
AgeI	ACCGGT	1 cut(s)	2404
AjnI	CCWGG	1 cut(s)	1098
AjuI	GAANNNNNNNTTGG	2 cut(s)	423, 455
AleI	CACNNNNGTG	1 cut(s)	411
Alw21I	GWGCWC	2 cut(s)	45, 374
Alw26I	GTCTC	4 cut(s)	1189, 1326, 1780, 2342
AlwI	GGATC	2 cut(s)	135, 671
AlwNI	CAGNNNCTG	3 cut(s)	461, 911, 1406
AoxI	GGCC	7 cut(s)	61, 357, 715, 1354, 1622, 1849, 2048
ApeKI	GCWGC	9 cut(s)	160, 309, 335, 452, 455, 532, 740, 866, 911
ApoI	RAATTY	5 cut(s)	1023, 1030, 1260, 1810, 2014
ArsI	GACNNNNNNTTYG	2 cut(s)	917, 949
AseI	ATTAAT	1 cut(s)	1839
AsiGI	ACCGGT	1 cut(s)	2404
Asp700I	GAANNNNTTC	2 cut(s)	21, 1662
AspLEI	GCGC	2 cut(s)	452, 845
AspS9I	GGNCC	6 cut(s)	62, 271, 1175, 1529, 1705, 2049
AsuC2I	CCSGG	1 cut(s)	1293
AsuHPI	GGTGA	7 cut(s)	285, 670, 1694, 1761, 2084, 2224, 2419
AvaII	GGWCC	4 cut(s)	271, 1175, 1529, 1705
BaeI	ACNNNNGTAYC	2 cut(s)	43, 76
BalI	TGGCCA	2 cut(s)	1356, 1851
BanI	GGYRCC	1 cut(s)	977
BanII	GRGCYC	1 cut(s)	374
BarI	GAAGNNNNNNTAC	2 cut(s)	872, 904
Bbv12I	GWGCWC	2 cut(s)	45, 374
BbvI	GCAGC	9 cut(s)	172, 296, 322, 439, 467, 544, 727, 853, 898
BciT130I	CCWGG	1 cut(s)	1100
BciVI	GTATCC	5 cut(s)	44, 792, 1217, 1426, 2253
BclI	TGATCA	1 cut(s)	2160
BcnI	CCSGG	1 cut(s)	1293
BcoDI	GTCTC	4 cut(s)	1189, 1326, 1780, 2342
BfaI	CTAG	5 cut(s)	561, 870, 1313, 2219, 2494
BfmI	CTRYAG	2 cut(s)	453, 1398
BfoI	RGCGCY	1 cut(s)	453
BfuI	GTATCC	5 cut(s)	44, 792, 1217, 1426, 2253
BglII	AGATCT	2 cut(s)	563, 2247
BmcAI	AGTACT	2 cut(s)	876, 1729
Bme1390I	CCNGG	2 cut(s)	1100, 1293
Bme18I	GGWCC	4 cut(s)	271, 1175, 1529, 1705
BmgT120I	GGNCC	6 cut(s)	62, 271, 1175, 1529, 1705, 2049
BmiI	GGNNCC	5 cut(s)	64, 579, 979, 1123, 1707
BmrFI	CCNGG	2 cut(s)	1100, 1293
BmrI	ACTGGG	1 cut(s)	51
BmuI	ACTGGG	1 cut(s)	51
Bpu10I	CCTNAGC	1 cut(s)	992
BpuMI	CCSGG	1 cut(s)	1293
BsaJI	CCNNGG	4 cut(s)	365, 418, 1125, 2133
BsaWI	WCCGGW	2 cut(s)	2363, 2404
BsaXI	ACNNNNNCTCC	6 cut(s)	891, 921, 1113, 1143, 1994, 2024
Bse118I	RCCGGY	1 cut(s)	2404
Bse1I	ACTGG	7 cut(s)	57, 228, 838, 1248, 1507, 2437, 2465
Bse3DI	GCAATG	3 cut(s)	718, 849, 1909
BseBI	CCWGG	1 cut(s)	1100
BseDI	CCNNGG	4 cut(s)	365, 418, 1125, 2133
BseMI	GCAATG	3 cut(s)	718, 849, 1909
BseMII	CTCAG	5 cut(s)	40, 144, 645, 983, 1619
BseNI	ACTGG	7 cut(s)	57, 228, 838, 1248, 1507, 2437, 2465
BseRI	GAGGAG	2 cut(s)	587, 2022
BseXI	GCAGC	9 cut(s)	172, 296, 322, 439, 467, 544, 727, 853, 898
BseYI	CCCAGC	2 cut(s)	134, 1365
BsgI	GTGCAG	3 cut(s)	321, 1620, 2011
Bsh1285I	CGRYCG	1 cut(s)	2405
BshFI	GGCC	7 cut(s)	63, 359, 717, 1356, 1624, 1851, 2050
BshNI	GGYRCC	1 cut(s)	977
BshTI	ACCGGT	1 cut(s)	2404
BsiEI	CGRYCG	1 cut(s)	2405
BsiHKAI	GWGCWC	2 cut(s)	45, 374
BsiSI	CCGG	9 cut(s)	785, 1293, 2364, 2377, 2398, 2405, 2419, 2447, 2475
BslFI	GGGAC	2 cut(s)	1513, 1691
BsmAI	GTCTC	4 cut(s)	1189, 1326, 1780, 2342
BsmFI	GGGAC	2 cut(s)	1513, 1691
BsnI	GGCC	7 cut(s)	63, 359, 717, 1356, 1624, 1851, 2050
Bsp1286I	GDGCHC	2 cut(s)	45, 374
Bsp143I	GATC	6 cut(s)	127, 563, 676, 1651, 2160, 2247
BspACI	CCGC	4 cut(s)	262, 718, 2139, 2191
BspANI	GGCC	7 cut(s)	63, 359, 717, 1356, 1624, 1851, 2050
BspCNI	CTCAG	5 cut(s)	39, 145, 644, 984, 1620
BspHI	TCATGA	1 cut(s)	1648
BspLI	GGNNCC	5 cut(s)	64, 579, 979, 1123, 1707
BspMAI	CTGCAG	1 cut(s)	457
BspPI	GGATC	2 cut(s)	135, 671
BspQI	GCTCTTC	2 cut(s)	471, 954
BspT107I	GGYRCC	1 cut(s)	977
BsrDI	GCAATG	3 cut(s)	718, 849, 1909
BsrFI	RCCGGY	1 cut(s)	2404
BsrI	ACTGG	7 cut(s)	57, 228, 838, 1248, 1507, 2437, 2465
BssAI	RCCGGY	1 cut(s)	2404
BssECI	CCNNGG	4 cut(s)	365, 418, 1125, 2133
BssMI	GATC	6 cut(s)	127, 563, 676, 1651, 2160, 2247
BssT1I	CCWWGG	4 cut(s)	365, 418, 1125, 2133
Bst2UI	CCWGG	1 cut(s)	1100
Bst4CI	ACNGT	8 cut(s)	284, 413, 780, 907, 1042, 1183, 1229, 2150
Bst6I	CTCTTC	4 cut(s)	12, 471, 954, 1827
BstAPI	GCANNNNNTGC	4 cut(s)	335, 461, 851, 1073
BstC8I	GCNNGC	3 cut(s)	10, 262, 1354
BstDEI	CTNAG	6 cut(s)	26, 153, 631, 992, 1628, 1676
BstEII	GGTNACC	1 cut(s)	2407
BstENI	CCTNNNNNAGG	1 cut(s)	1745
BstH2I	RGCGCY	1 cut(s)	453
BstHHI	GCGC	2 cut(s)	452, 845
BstKTI	GATC	6 cut(s)	130, 566, 679, 1654, 2163, 2250
BstMAI	GTCTC	4 cut(s)	1189, 1326, 1780, 2342
BstMBI	GATC	6 cut(s)	127, 563, 676, 1651, 2160, 2247
BstMCI	CGRYCG	1 cut(s)	2405
BstMWI	GCNNNNNNNGC	8 cut(s)	335, 378, 461, 717, 851, 920, 1073, 1362
BstNI	CCWGG	1 cut(s)	1100
BstNSI	RCATGY	6 cut(s)	485, 1150, 1302, 1894, 1990, 2011
BstPI	GGTNACC	1 cut(s)	2407
BstSCI	CCNGG	2 cut(s)	1098, 1291
BstSFI	CTRYAG	2 cut(s)	453, 1398
BstV1I	GCAGC	9 cut(s)	172, 296, 322, 439, 467, 544, 727, 853, 898
BstX2I	RGATCY	2 cut(s)	563, 2247
BstYI	RGATCY	2 cut(s)	563, 2247
BsuI	GTATCC	5 cut(s)	44, 792, 1217, 1426, 2253
BsuRI	GGCC	7 cut(s)	63, 359, 717, 1356, 1624, 1851, 2050
BtsIMutI	CAGTG	8 cut(s)	64, 338, 418, 776, 901, 1034, 2430, 2458
Cac8I	GCNNGC	3 cut(s)	10, 262, 1354
CaiI	CAGNNNCTG	3 cut(s)	461, 911, 1406
CciI	TCATGA	1 cut(s)	1648
CfoI	GCGC	2 cut(s)	452, 845
Cfr10I	RCCGGY	1 cut(s)	2404
Cfr13I	GGNCC	6 cut(s)	62, 271, 1175, 1529, 1705, 2049
CseI	GACGC	1 cut(s)	1634
Csp6I	GTAC	9 cut(s)	121, 148, 512, 542, 875, 903, 1728, 1865, 1980
CspAI	ACCGGT	1 cut(s)	2404
CviQI	GTAC	9 cut(s)	121, 148, 512, 542, 875, 903, 1728, 1865, 1980
DdeI	CTNAG	6 cut(s)	26, 153, 631, 992, 1628, 1676
DpnI	GATC	6 cut(s)	129, 565, 678, 1653, 2162, 2249
DpnII	GATC	6 cut(s)	127, 563, 676, 1651, 2160, 2247
DraI	TTTAAA	1 cut(s)	186
EaeI	YGGCCR	3 cut(s)	715, 1354, 1849
Eam1104I	CTCTTC	4 cut(s)	12, 471, 954, 1827
EarI	CTCTTC	4 cut(s)	12, 471, 954, 1827
EciI	GGCGGA	1 cut(s)	2154
Ecl136II	GAGCTC	1 cut(s)	372
Eco130I	CCWWGG	4 cut(s)	365, 418, 1125, 2133
Eco147I	AGGCCT	1 cut(s)	359
Eco24I	GRGCYC	1 cut(s)	374
Eco47I	GGWCC	4 cut(s)	271, 1175, 1529, 1705
Eco53kI	GAGCTC	1 cut(s)	372
Eco57I	CTGAAG	4 cut(s)	362, 877, 899, 2106
Eco91I	GGTNACC	1 cut(s)	2407
EcoICRI	GAGCTC	1 cut(s)	372
EcoNI	CCTNNNNNAGG	1 cut(s)	1745
EcoO109I	RGGNCCY	3 cut(s)	271, 1529, 1705
EcoO65I	GGTNACC	1 cut(s)	2407
EcoRI	GAATTC	2 cut(s)	1030, 1260
EcoRII	CCWGG	1 cut(s)	1098
EcoT14I	CCWWGG	4 cut(s)	365, 418, 1125, 2133
EcoT38I	GRGCYC	1 cut(s)	374
ErhI	CCWWGG	4 cut(s)	365, 418, 1125, 2133
FalI	AAGNNNNNCTT	2 cut(s)	1546, 1578
FaqI	GGGAC	2 cut(s)	1513, 1691
FauI	CCCGC	1 cut(s)	269
FauNDI	CATATG	1 cut(s)	2080
FbaI	TGATCA	1 cut(s)	2160
FriOI	GRGCYC	1 cut(s)	374
FspBI	CTAG	5 cut(s)	561, 870, 1313, 2219, 2494
GlaI	GCGC	2 cut(s)	451, 844
GsaI	CCCAGC	2 cut(s)	138, 1369
HaeII	RGCGCY	1 cut(s)	453
HaeIII	GGCC	7 cut(s)	63, 359, 717, 1356, 1624, 1851, 2050
HapII	CCGG	9 cut(s)	785, 1293, 2364, 2377, 2398, 2405, 2419, 2447, 2475
HgaI	GACGC	1 cut(s)	1634
HhaI	GCGC	2 cut(s)	452, 845
Hin6I	GCGC	2 cut(s)	450, 843
HinP1I	GCGC	2 cut(s)	450, 843
HincII	GTYRAC	1 cut(s)	1434
HindII	GTYRAC	1 cut(s)	1434
HindIII	AAGCTT	2 cut(s)	344, 1869
HpaII	CCGG	9 cut(s)	785, 1293, 2364, 2377, 2398, 2405, 2419, 2447, 2475
HphI	GGTGA	7 cut(s)	285, 670, 1694, 1761, 2084, 2224, 2419
Hpy166II	GTNNAC	5 cut(s)	121, 512, 1434, 2075, 2372
Hpy188I	TCNGA	9 cut(s)	29, 86, 154, 619, 1029, 1207, 1330, 1629, 2157
Hpy188III	TCNNGA	8 cut(s)	633, 730, 1257, 1532, 1649, 1655, 2440, 2468
Hpy8I	GTNNAC	5 cut(s)	121, 512, 1434, 2075, 2372
Hpy99I	CGWCG	2 cut(s)	1938, 2306
HpyAV	CCTTC	3 cut(s)	689, 1696, 1989
HpyCH4III	ACNGT	8 cut(s)	284, 413, 780, 907, 1042, 1183, 1229, 2150
HpyCH4IV	ACGT	1 cut(s)	1933
HpyF10VI	GCNNNNNNNGC	8 cut(s)	335, 378, 461, 717, 851, 920, 1073, 1362
HpyF3I	CTNAG	6 cut(s)	26, 153, 631, 992, 1628, 1676
HpySE526I	ACGT	1 cut(s)	1933
HspAI	GCGC	2 cut(s)	450, 843
Ksp22I	TGATCA	1 cut(s)	2160
Kzo9I	GATC	6 cut(s)	127, 563, 676, 1651, 2160, 2247
LguI	GCTCTTC	2 cut(s)	471, 954
LmnI	GCTCC	6 cut(s)	40, 369, 1101, 1121, 1403, 2035
Lsp1109I	GCAGC	9 cut(s)	172, 296, 322, 439, 467, 544, 727, 853, 898
MaeI	CTAG	5 cut(s)	561, 870, 1313, 2219, 2494
MaeII	ACGT	1 cut(s)	1933
MaeIII	GTNAC	9 cut(s)	242, 1266, 1468, 1556, 1573, 1767, 2212, 2386, 2407
MalI	GATC	6 cut(s)	129, 565, 678, 1653, 2162, 2249
MboI	GATC	6 cut(s)	127, 563, 676, 1651, 2160, 2247
MfeI	CAATTG	1 cut(s)	918
MflI	RGATCY	2 cut(s)	563, 2247
MhlI	GDGCHC	2 cut(s)	45, 374
MlsI	TGGCCA	2 cut(s)	1356, 1851
MluNI	TGGCCA	2 cut(s)	1356, 1851
MlyI	GAGTC	6 cut(s)	1775, 2209, 2244, 2354, 2367, 2388
MmeI	TCCRAC	3 cut(s)	854, 1185, 1202
Mox20I	TGGCCA	2 cut(s)	1356, 1851
MroXI	GAANNNNTTC	2 cut(s)	21, 1662
MscI	TGGCCA	2 cut(s)	1356, 1851
MseI	TTAA	8 cut(s)	99, 177, 185, 939, 1449, 1808, 1839, 2106
MslI	CAYNNNNRTG	3 cut(s)	411, 1116, 1774
Msp20I	TGGCCA	2 cut(s)	1356, 1851
MspA1I	CMGCKG	5 cut(s)	163, 309, 335, 381, 720
MspI	CCGG	9 cut(s)	785, 1293, 2364, 2377, 2398, 2405, 2419, 2447, 2475
MspR9I	CCNGG	2 cut(s)	1100, 1293
MunI	CAATTG	1 cut(s)	918
MvaI	CCWGG	1 cut(s)	1100
MwoI	GCNNNNNNNGC	8 cut(s)	335, 378, 461, 717, 851, 920, 1073, 1362
NciI	CCSGG	1 cut(s)	1293
NdeI	CATATG	1 cut(s)	2080
NdeII	GATC	6 cut(s)	127, 563, 676, 1651, 2160, 2247
NlaIV	GGNNCC	5 cut(s)	64, 579, 979, 1123, 1707
NmeAIII	GCCGAG	1 cut(s)	1036
NmuCI	GTSAC	5 cut(s)	242, 1468, 1767, 2212, 2407
NspI	RCATGY	6 cut(s)	485, 1150, 1302, 1894, 1990, 2011
OliI	CACNNNNGTG	1 cut(s)	411
PagI	TCATGA	1 cut(s)	1648
PceI	AGGCCT	1 cut(s)	359
PciI	ACATGT	2 cut(s)	1890, 1986
PciSI	GCTCTTC	2 cut(s)	471, 954
PdmI	GAANNNNTTC	2 cut(s)	21, 1662
PfeI	GAWTC	8 cut(s)	403, 642, 1605, 2415, 2436, 2443, 2464, 2471
PflFI	GACNNNGTC	1 cut(s)	1042
PflMI	CCANNNNNTGG	3 cut(s)	587, 2432, 2460
PinAI	ACCGGT	1 cut(s)	2404
PleI	GAGTC	6 cut(s)	1774, 2209, 2243, 2354, 2367, 2388
PpsI	GAGTC	6 cut(s)	1774, 2209, 2243, 2354, 2367, 2388
PpuMI	RGGWCCY	3 cut(s)	271, 1529, 1705
PscI	ACATGT	2 cut(s)	1890, 1986
PshBI	ATTAAT	1 cut(s)	1839
Psp124BI	GAGCTC	1 cut(s)	374
Psp5II	RGGWCCY	3 cut(s)	271, 1529, 1705
Psp6I	CCWGG	1 cut(s)	1098
PspEI	GGTNACC	1 cut(s)	2407
PspFI	CCCAGC	2 cut(s)	134, 1365
PspGI	CCWGG	1 cut(s)	1098
PspN4I	GGNNCC	5 cut(s)	64, 579, 979, 1123, 1707
PspPI	GGNCC	6 cut(s)	62, 271, 1175, 1529, 1705, 2049
PspPPI	RGGWCCY	3 cut(s)	271, 1529, 1705
PstI	CTGCAG	1 cut(s)	457
PstNI	CAGNNNCTG	3 cut(s)	461, 911, 1406
PsuI	RGATCY	2 cut(s)	563, 2247
PsyI	GACNNNGTC	1 cut(s)	1042
PvuII	CAGCTG	4 cut(s)	163, 309, 335, 381
RsaI	GTAC	9 cut(s)	122, 149, 513, 543, 876, 904, 1729, 1866, 1981
RsaNI	GTAC	9 cut(s)	121, 148, 512, 542, 875, 903, 1728, 1865, 1980
RseI	CAYNNNNRTG	3 cut(s)	411, 1116, 1774
SacI	GAGCTC	1 cut(s)	374
SapI	GCTCTTC	2 cut(s)	471, 954
SaqAI	TTAA	8 cut(s)	99, 177, 185, 939, 1449, 1808, 1839, 2106
Sau3AI	GATC	6 cut(s)	127, 563, 676, 1651, 2160, 2247
Sau96I	GGNCC	6 cut(s)	62, 271, 1175, 1529, 1705, 2049
ScaI	AGTACT	2 cut(s)	876, 1729
SchI	GAGTC	6 cut(s)	1775, 2209, 2244, 2354, 2367, 2388
ScrFI	CCNGG	2 cut(s)	1100, 1293
SduI	GDGCHC	2 cut(s)	45, 374
SfcI	CTRYAG	2 cut(s)	453, 1398
SinI	GGWCC	4 cut(s)	271, 1175, 1529, 1705
SmiI	ATTTAAAT	1 cut(s)	186
SmiMI	CAYNNNNRTG	3 cut(s)	411, 1116, 1774
SseBI	AGGCCT	1 cut(s)	359
SsiI	CCGC	4 cut(s)	262, 718, 2139, 2191
SspI	AATATT	1 cut(s)	1755
SspMI	CTAG	5 cut(s)	561, 870, 1313, 2219, 2494
SstI	GAGCTC	1 cut(s)	374
StuI	AGGCCT	1 cut(s)	359
StyD4I	CCNGG	2 cut(s)	1098, 1291
StyI	CCWWGG	4 cut(s)	365, 418, 1125, 2133
SwaI	ATTTAAAT	1 cut(s)	186
TaaI	ACNGT	8 cut(s)	284, 413, 780, 907, 1042, 1183, 1229, 2150
TaiI	ACGT	1 cut(s)	1936
TaqI	TCGA	5 cut(s)	75, 276, 856, 930, 1764
TatI	WGTACW	7 cut(s)	120, 147, 541, 874, 1727, 1864, 1979
TauI	GCSGC	1 cut(s)	720
TfiI	GAWTC	8 cut(s)	403, 642, 1605, 2415, 2436, 2443, 2464, 2471
Tru1I	TTAA	8 cut(s)	99, 177, 185, 939, 1449, 1808, 1839, 2106
Tru9I	TTAA	8 cut(s)	99, 177, 185, 939, 1449, 1808, 1839, 2106
TscAI	CASTG	8 cut(s)	64, 345, 418, 783, 901, 1041, 2437, 2465
TseFI	GTSAC	5 cut(s)	242, 1468, 1767, 2212, 2407
TseI	GCWGC	9 cut(s)	160, 309, 335, 452, 455, 532, 740, 866, 911
Tsp45I	GTSAC	5 cut(s)	242, 1468, 1767, 2212, 2407
TspGWI	ACGGA	1 cut(s)	1285
TspRI	CASTG	8 cut(s)	64, 345, 418, 783, 901, 1041, 2437, 2465
Tth111I	GACNNNGTC	1 cut(s)	1042
Van91I	CCANNNNNTGG	3 cut(s)	587, 2432, 2460
VpaK11BI	GGWCC	4 cut(s)	271, 1175, 1529, 1705
VspI	ATTAAT	1 cut(s)	1839
XagI	CCTNNNNNAGG	1 cut(s)	1745
XapI	RAATTY	5 cut(s)	1023, 1030, 1260, 1810, 2014
XceI	RCATGY	6 cut(s)	485, 1150, 1302, 1894, 1990, 2011
XcmI	CCANNNNNNNNNTGG	1 cut(s)	688
XmnI	GAANNNNTTC	2 cut(s)	21, 1662
XspI	CTAG	5 cut(s)	561, 870, 1313, 2219, 2494
ZrmI	AGTACT	2 cut(s)	876, 1729

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.