Rorug05G0091600

Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000986
Physical Location & Seq
Forward (+)
8005801 .. 8038540
32740 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0091600.1

Sequence Viewer

Length: 756 bp
ATGGCCTATGAAAACAAACCCAACACGGTCCTGGACTCTGATGCCCAAAGAAGATTGGGAAGGGGAAAGATCGAGATCAAGCGGATCGAAAACACCACCAATCGTCAAGTCACCTTCTGCAAAAGGCGCAATGGTTTGCTCAAGAAGGCCTATGAGCTCTCTGTGCTCTGTGATGCTGAGGTTGCTCTCATAGTCTTCTCTAACCGTGGCCGTCTCTATGAGTATTCCAACAACAGCAGTGTTAGAGAAACAATTGAACGATACAAGAAGGCATGTGCAGATTCTTCAAATAATGGATCTGTCTCTGAAGCTACTACTCAGTACTATCAGCAAGAAGCTGCCAAACTGCGTGCCCAGATAACCACTTTGCAGAACAGTAACAGGGGTTATATGGCTGAGGGTTTGAGCAATATGTCTATCAAGGAGCTCAAGGGCGTGGAGACCAAACTTGAGAAAGCAATTAGCAGAATTAGATCCAAGAAGAACGAGCTCTTGTTTGCCGAAATTGAGTACATGCAGAAAAGGGAACTTGACTTGCACAACAATAACCAGCTCCTCCGAGCAAAGGGACAGATAGCTGAGAATGAGAGGCACCAGCAAAGCATAAATGCGATTGCAGGTGGGCATGGAAGCTACGACATCATGCAGCCGACTCAGCCATTTCATGAGGCTCGCAACTATTTTCAAGTGAATGCTTTGCAACCCAATATCCATCAGTACTCGCGCCATGACCAGATTTCCCTTCAATTAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0006066 GO:0006082 GO:0006464 GO:0006605 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006807 GO:0006810 GO:0006886 GO:0006950 GO:0006952 GO:0006970 GO:0007154 GO:0007165 GO:0008104 GO:0008150 GO:0008152 GO:0008265 GO:0008299 GO:0008610 GO:0009000 GO:0009058 GO:0009266 GO:0009408 GO:0009409 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009651 GO:0009687 GO:0009688 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009743 GO:0009755 GO:0009756 GO:0009987 GO:0010033 GO:0010118 GO:0010182 GO:0015031 GO:0015833 GO:0016053 GO:0016106 GO:0016114 GO:0016740 GO:0016782 GO:0016783 GO:0016829 GO:0016846 GO:0017038 GO:0018315 GO:0019538 GO:0019752 GO:0023052 GO:0032787 GO:0032870 GO:0033036 GO:0033365 GO:0034613 GO:0036211 GO:0042040 GO:0042221 GO:0042742 GO:0042886 GO:0043170 GO:0043207 GO:0043288 GO:0043289 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0045036 GO:0045037 GO:0045184 GO:0046165 GO:0046394 GO:0046907 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051704 GO:0051707 GO:0051716 GO:0055085 GO:0065002 GO:0065007 GO:0070727 GO:0070887 GO:0071310 GO:0071322 GO:0071365 GO:0071495 GO:0071702 GO:0071704 GO:0071705 GO:0071806 GO:0072330 GO:0072594 GO:0072596 GO:0072598 GO:0098542 GO:1901564 GO:1901576 GO:1901615 GO:1901617 GO:1901700 GO:1901701 GO:1902644 GO:1902645
KEGG Pathways
Metabolic & Signaling
ko00790 map00790
Pfam Domains
Protein Families
Aminotran_5 MOSC MOSC_N

Protein Analysis

251

Amino Acids

28.82

Weight (kDa)

9.4

Isoelectric Point (pI)

52.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SRF-TF PF00319 28 - 75 1.6e-26 SRF-type transcription factor (DNA-binding and dimerisation domain)
K-box PF01486 104 - 189 3.6e-25 K-box region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 608
Acc36I ACCTGC 1 cut(s) 608
AccB1I GGYRCC 1 cut(s) 591
AccII CGCG 1 cut(s) 724
AciI CCGC 1 cut(s) 82
AclWI GGATC 3 cut(s) 92, 304, 468
AcoI YGGCCR 1 cut(s) 208
AcuI CTGAAG 1 cut(s) 327
AfaI GTAC 3 cut(s) 323, 512, 719
AfiI CCNNNNNNNGG 1 cut(s) 565
AgsI TTSAA 4 cut(s) 257, 288, 686, 746
AjnI CCWGG 1 cut(s) 30
AluBI AGCT 8 cut(s) 157, 311, 338, 427, 490, 553, 578, 633
AluI AGCT 8 cut(s) 157, 311, 338, 427, 490, 553, 578, 633
Alw21I GWGCWC 4 cut(s) 159, 168, 429, 492
Alw26I GTCTC 3 cut(s) 218, 307, 434
AlwI GGATC 3 cut(s) 92, 304, 468
AoxI GGCC 3 cut(s) 3, 147, 208
ApeKI GCWGC 2 cut(s) 338, 646
AspLEI GCGC 2 cut(s) 129, 726
AspS9I GGNCC 1 cut(s) 28
AsuHPI GGTGA 1 cut(s) 103
AvaII GGWCC 1 cut(s) 28
BaeGI GKGCMC 1 cut(s) 355
BanI GGYRCC 1 cut(s) 591
BanII GRGCYC 3 cut(s) 159, 429, 492
BbsI GAAGAC 1 cut(s) 187
Bbv12I GWGCWC 4 cut(s) 159, 168, 429, 492
BbvCI CCTCAGC 2 cut(s) 177, 396
BbvI GCAGC 2 cut(s) 325, 658
BccI CCATC 1 cut(s) 720
BceAI ACGGC 1 cut(s) 195
BciT130I CCWGG 1 cut(s) 32
BcoDI GTCTC 3 cut(s) 218, 307, 434
BfuAI ACCTGC 1 cut(s) 608
BisI GCNGC 2 cut(s) 339, 647
BlsI GCNGC 2 cut(s) 340, 648
BmcAI AGTACT 2 cut(s) 323, 719
Bme1390I CCNGG 1 cut(s) 32
Bme18I GGWCC 1 cut(s) 28
BmgT120I GGNCC 1 cut(s) 28
BmiI GGNNCC 1 cut(s) 593
BmrFI CCNGG 1 cut(s) 32
BmsI GCATC 2 cut(s) 31, 163
BpiI GAAGAC 1 cut(s) 187
Bpu10I CCTNAGC 2 cut(s) 177, 396
BpuEI CTTGAG 3 cut(s) 125, 413, 470
BsaBI GATNNNNATC 1 cut(s) 74
BsaI GGTCTC 1 cut(s) 434
BsaJI CCNNGG 1 cut(s) 205
Bsc4I CCNNNNNNNGG 1 cut(s) 565
Bse3DI GCAATG 1 cut(s) 136
Bse8I GATNNNNATC 1 cut(s) 74
BseBI CCWGG 1 cut(s) 32
BseDI CCNNGG 1 cut(s) 205
BseJI GATNNNNATC 1 cut(s) 74
BseLI CCNNNNNNNGG 1 cut(s) 565
BseMI GCAATG 1 cut(s) 136
BseMII CTCAG 5 cut(s) 168, 332, 387, 570, 668
BseRI GAGGAG 1 cut(s) 545
BseSI GKGCMC 1 cut(s) 355
BseXI GCAGC 2 cut(s) 325, 658
BsgI GTGCAG 1 cut(s) 297
Bsh1236I CGCG 1 cut(s) 724
BshFI GGCC 3 cut(s) 5, 149, 210
BshNI GGYRCC 1 cut(s) 591
BsiHKAI GWGCWC 4 cut(s) 159, 168, 429, 492
BslFI GGGAC 1 cut(s) 582
BslI CCNNNNNNNGG 1 cut(s) 565
BsmAI GTCTC 3 cut(s) 218, 307, 434
BsmBI CGTCTC 1 cut(s) 218
BsmFI GGGAC 1 cut(s) 582
BsmI GAATGC 1 cut(s) 697
BsnI GGCC 3 cut(s) 5, 149, 210
Bso31I GGTCTC 1 cut(s) 434
Bsp1286I GDGCHC 5 cut(s) 159, 168, 355, 429, 492
Bsp143I GATC 5 cut(s) 69, 75, 84, 296, 473
BspACI CCGC 1 cut(s) 82
BspANI GGCC 3 cut(s) 5, 149, 210
BspCNI CTCAG 5 cut(s) 169, 331, 388, 571, 667
BspFNI CGCG 1 cut(s) 724
BspHI TCATGA 1 cut(s) 664
BspLI GGNNCC 1 cut(s) 593
BspMI ACCTGC 1 cut(s) 608
BspPI GGATC 3 cut(s) 92, 304, 468
BspT107I GGYRCC 1 cut(s) 591
BspTNI GGTCTC 1 cut(s) 434
BsrDI GCAATG 1 cut(s) 136
BssECI CCNNGG 1 cut(s) 205
BssMI GATC 5 cut(s) 69, 75, 84, 296, 473
Bst2UI CCWGG 1 cut(s) 32
Bst4CI ACNGT 3 cut(s) 28, 206, 377
BstC8I GCNNGC 2 cut(s) 351, 673
BstDEI CTNAG 5 cut(s) 177, 318, 396, 579, 654
BstDSI CCRYGG 1 cut(s) 205
BstFNI CGCG 1 cut(s) 724
BstHHI GCGC 2 cut(s) 129, 726
BstKTI GATC 5 cut(s) 72, 78, 87, 299, 476
BstMAI GTCTC 3 cut(s) 218, 307, 434
BstMBI GATC 5 cut(s) 69, 75, 84, 296, 473
BstMWI GCNNNNNNNGC 4 cut(s) 126, 163, 182, 655
BstNI CCWGG 1 cut(s) 32
BstNSI RCATGY 2 cut(s) 276, 517
BstSCI CCNGG 1 cut(s) 30
BstSLI GKGCMC 1 cut(s) 355
BstUI CGCG 1 cut(s) 724
BstV1I GCAGC 2 cut(s) 325, 658
BstV2I GAAGAC 1 cut(s) 187
BstX2I RGATCY 2 cut(s) 296, 473
BstYI RGATCY 2 cut(s) 296, 473
BsuRI GGCC 3 cut(s) 5, 149, 210
BtgI CCRYGG 1 cut(s) 205
BtsI GCAGTG 1 cut(s) 244
BtsIMutI CAGTG 1 cut(s) 244
BveI ACCTGC 1 cut(s) 608
Cac8I GCNNGC 2 cut(s) 351, 673
CciI TCATGA 1 cut(s) 664
CfoI GCGC 2 cut(s) 129, 726
Cfr13I GGNCC 1 cut(s) 28
Csp6I GTAC 3 cut(s) 322, 511, 718
CviAII CATG 6 cut(s) 273, 514, 626, 643, 665, 728
CviQI GTAC 3 cut(s) 322, 511, 718
DdeI CTNAG 5 cut(s) 177, 318, 396, 579, 654
DpnI GATC 5 cut(s) 71, 77, 86, 298, 475
DpnII GATC 5 cut(s) 69, 75, 84, 296, 473
EaeI YGGCCR 1 cut(s) 208
Ecl136II GAGCTC 3 cut(s) 157, 427, 490
Eco147I AGGCCT 1 cut(s) 149
Eco24I GRGCYC 3 cut(s) 159, 429, 492
Eco31I GGTCTC 1 cut(s) 434
Eco47I GGWCC 1 cut(s) 28
Eco53kI GAGCTC 3 cut(s) 157, 427, 490
Eco57I CTGAAG 1 cut(s) 327
EcoICRI GAGCTC 3 cut(s) 157, 427, 490
EcoRII CCWGG 1 cut(s) 30
EcoT38I GRGCYC 3 cut(s) 159, 429, 492
Esp3I CGTCTC 1 cut(s) 218
FaeI CATG 6 cut(s) 276, 517, 629, 646, 668, 731
FaqI GGGAC 1 cut(s) 582
FatI CATG 6 cut(s) 272, 513, 625, 642, 664, 727
Fnu4HI GCNGC 2 cut(s) 339, 647
FriOI GRGCYC 3 cut(s) 159, 429, 492
Fsp4HI GCNGC 2 cut(s) 339, 647
GlaI GCGC 2 cut(s) 128, 725
GluI GCNGC 2 cut(s) 339, 647
HaeIII GGCC 3 cut(s) 5, 149, 210
HhaI GCGC 2 cut(s) 129, 726
Hin1II CATG 6 cut(s) 276, 517, 629, 646, 668, 731
Hin6I GCGC 2 cut(s) 127, 724
HinP1I GCGC 2 cut(s) 127, 724
HinfI GANTC 3 cut(s) 35, 281, 652
HphI GGTGA 1 cut(s) 103
Hpy188I TCNGA 3 cut(s) 40, 307, 560
Hpy188III TCNNGA 3 cut(s) 73, 142, 665
HpyAV CCTTC 5 cut(s) 54, 124, 139, 262, 752
HpyCH4III ACNGT 3 cut(s) 28, 206, 377
HpyCH4V TGCA 8 cut(s) 120, 278, 370, 517, 538, 617, 646, 700
HpyF10VI GCNNNNNNNGC 4 cut(s) 126, 163, 182, 655
HpyF3I CTNAG 5 cut(s) 177, 318, 396, 579, 654
Hsp92II CATG 6 cut(s) 276, 517, 629, 646, 668, 731
HspAI GCGC 2 cut(s) 127, 724
Kzo9I GATC 5 cut(s) 69, 75, 84, 296, 473
LmnI GCTCC 2 cut(s) 424, 558
LpnPI CCDG 8 cut(s) 17, 44, 367, 368, 563, 603, 608, 746
Lsp1109I GCAGC 2 cut(s) 325, 658
LweI GCATC 2 cut(s) 31, 163
MaeIII GTNAC 2 cut(s) 109, 377
MalI GATC 5 cut(s) 71, 77, 86, 298, 475
MboI GATC 5 cut(s) 69, 75, 84, 296, 473
MboII GAAGA 4 cut(s) 63, 187, 276, 493
MfeI CAATTG 1 cut(s) 252
MflI RGATCY 2 cut(s) 296, 473
MhlI GDGCHC 5 cut(s) 159, 168, 355, 429, 492
MluCI AATT 5 cut(s) 252, 459, 468, 504, 746
MlyI GAGTC 2 cut(s) 29, 646
MmeI TCCRAC 1 cut(s) 252
MnlI CCTC 5 cut(s) 172, 391, 566, 582, 661
MspR9I CCNGG 1 cut(s) 32
MunI CAATTG 1 cut(s) 252
Mva1269I GAATGC 1 cut(s) 697
MvaI CCWGG 1 cut(s) 32
MvnI CGCG 1 cut(s) 724
MwoI GCNNNNNNNGC 4 cut(s) 126, 163, 182, 655
NdeII GATC 5 cut(s) 69, 75, 84, 296, 473
NlaIII CATG 6 cut(s) 276, 517, 629, 646, 668, 731
NlaIV GGNNCC 1 cut(s) 593
NmuCI GTSAC 1 cut(s) 109
NspI RCATGY 2 cut(s) 276, 517
PagI TCATGA 1 cut(s) 664
PaqCI CACCTGC 1 cut(s) 608
PceI AGGCCT 1 cut(s) 149
PctI GAATGC 1 cut(s) 697
PfeI GAWTC 1 cut(s) 281
PfoI TCCNGGA 1 cut(s) 30
PkrI GCNGC 2 cut(s) 340, 648
PleI GAGTC 2 cut(s) 29, 646
PpsI GAGTC 2 cut(s) 29, 646
Psp124BI GAGCTC 3 cut(s) 159, 429, 492
Psp6I CCWGG 1 cut(s) 30
PspGI CCWGG 1 cut(s) 30
PspN4I GGNNCC 1 cut(s) 593
PspPI GGNCC 1 cut(s) 28
PsuI RGATCY 2 cut(s) 296, 473
RsaI GTAC 3 cut(s) 323, 512, 719
RsaNI GTAC 3 cut(s) 322, 511, 718
SacI GAGCTC 3 cut(s) 159, 429, 492
SatI GCNGC 2 cut(s) 339, 647
Sau3AI GATC 5 cut(s) 69, 75, 84, 296, 473
Sau96I GGNCC 1 cut(s) 28
ScaI AGTACT 2 cut(s) 323, 719
SchI GAGTC 2 cut(s) 29, 646
ScrFI CCNGG 1 cut(s) 32
SduI GDGCHC 5 cut(s) 159, 168, 355, 429, 492
SfaNI GCATC 2 cut(s) 31, 163
SinI GGWCC 1 cut(s) 28
SmlI CTYRAG 3 cut(s) 140, 428, 449
SmoI CTYRAG 3 cut(s) 140, 428, 449
Sse9I AATT 5 cut(s) 252, 459, 468, 504, 746
SseBI AGGCCT 1 cut(s) 149
SsiI CCGC 1 cut(s) 82
SstI GAGCTC 3 cut(s) 159, 429, 492
StuI AGGCCT 1 cut(s) 149
StyD4I CCNGG 1 cut(s) 30
TaaI ACNGT 3 cut(s) 28, 206, 377
TaqI TCGA 2 cut(s) 72, 87
TasI AATT 5 cut(s) 252, 459, 468, 504, 746
TatI WGTACW 3 cut(s) 321, 510, 717
TfiI GAWTC 1 cut(s) 281
TscAI CASTG 1 cut(s) 244
TseFI GTSAC 1 cut(s) 109
TseI GCWGC 2 cut(s) 338, 646
Tsp45I GTSAC 1 cut(s) 109
TspDTI ATGAA 2 cut(s) 24, 653
TspRI CASTG 1 cut(s) 244
VpaK11BI GGWCC 1 cut(s) 28
XceI RCATGY 2 cut(s) 276, 517
XcmI CCANNNNNNNNNTGG 1 cut(s) 28
ZrmI AGTACT 2 cut(s) 323, 719
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.