Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Self-incomp_S1 | PF05938 | 25 - 96 | 1.4e-17 | Plant self-incompatibility protein S1 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 260 |
| AflIII | ACRYGT | 2 cut(s) | 169, 209 |
| AgsI | TTSAA | 3 cut(s) | 15, 73, 176 |
| AluBI | AGCT | 1 cut(s) | 63 |
| AluI | AGCT | 1 cut(s) | 63 |
| ApoI | RAATTY | 1 cut(s) | 260 |
| AseI | ATTAAT | 1 cut(s) | 192 |
| AspS9I | GGNCC | 2 cut(s) | 143, 236 |
| AvaII | GGWCC | 2 cut(s) | 143, 236 |
| BciVI | GTATCC | 1 cut(s) | 67 |
| BfuI | GTATCC | 1 cut(s) | 67 |
| Bme18I | GGWCC | 2 cut(s) | 143, 236 |
| BmgT120I | GGNCC | 2 cut(s) | 143, 236 |
| BsaWI | WCCGGW | 1 cut(s) | 281 |
| BseGI | GGATG | 1 cut(s) | 122 |
| BsiSI | CCGG | 1 cut(s) | 282 |
| Bsp143I | GATC | 1 cut(s) | 75 |
| BssMI | GATC | 1 cut(s) | 75 |
| BstF5I | GGATG | 1 cut(s) | 122 |
| BstKTI | GATC | 1 cut(s) | 78 |
| BstMBI | GATC | 1 cut(s) | 75 |
| BstNSI | RCATGY | 2 cut(s) | 46, 173 |
| BsuI | GTATCC | 1 cut(s) | 67 |
| BtsCI | GGATG | 1 cut(s) | 122 |
| Cfr13I | GGNCC | 2 cut(s) | 143, 236 |
| CviAII | CATG | 3 cut(s) | 43, 53, 170 |
| CviJI | RGCY | 1 cut(s) | 63 |
| CviKI_1 | RGCY | 1 cut(s) | 63 |
| DpnI | GATC | 1 cut(s) | 77 |
| DpnII | GATC | 1 cut(s) | 75 |
| Eco47I | GGWCC | 2 cut(s) | 143, 236 |
| EcoO109I | RGGNCCY | 1 cut(s) | 236 |
| FaeI | CATG | 3 cut(s) | 46, 56, 173 |
| FatI | CATG | 3 cut(s) | 42, 52, 169 |
| FokI | GGATG | 1 cut(s) | 129 |
| HapII | CCGG | 1 cut(s) | 282 |
| Hin1II | CATG | 3 cut(s) | 46, 56, 173 |
| HinfI | GANTC | 1 cut(s) | 69 |
| HpaII | CCGG | 1 cut(s) | 282 |
| Hpy188I | TCNGA | 2 cut(s) | 111, 258 |
| Hpy188III | TCNNGA | 3 cut(s) | 66, 73, 79 |
| HpyAV | CCTTC | 1 cut(s) | 293 |
| HpyCH4IV | ACGT | 1 cut(s) | 211 |
| HpyCH4V | TGCA | 1 cut(s) | 42 |
| HpySE526I | ACGT | 1 cut(s) | 211 |
| Hsp92II | CATG | 3 cut(s) | 46, 56, 173 |
| Kzo9I | GATC | 1 cut(s) | 75 |
| LpnPI | CCDG | 3 cut(s) | 51, 73, 295 |
| MaeII | ACGT | 1 cut(s) | 211 |
| MalI | GATC | 1 cut(s) | 77 |
| MboI | GATC | 1 cut(s) | 75 |
| MboII | GAAGA | 1 cut(s) | 98 |
| MluCI | AATT | 4 cut(s) | 181, 193, 223, 260 |
| MnlI | CCTC | 1 cut(s) | 289 |
| MseI | TTAA | 1 cut(s) | 192 |
| MspI | CCGG | 1 cut(s) | 282 |
| NdeII | GATC | 1 cut(s) | 75 |
| NlaIII | CATG | 3 cut(s) | 46, 56, 173 |
| NspI | RCATGY | 2 cut(s) | 46, 173 |
| PciI | ACATGT | 1 cut(s) | 169 |
| PfeI | GAWTC | 1 cut(s) | 69 |
| PpuMI | RGGWCCY | 1 cut(s) | 236 |
| PscI | ACATGT | 1 cut(s) | 169 |
| PshBI | ATTAAT | 1 cut(s) | 192 |
| Psp5II | RGGWCCY | 1 cut(s) | 236 |
| PspPI | GGNCC | 2 cut(s) | 143, 236 |
| PspPPI | RGGWCCY | 1 cut(s) | 236 |
| SaqAI | TTAA | 1 cut(s) | 192 |
| Sau3AI | GATC | 1 cut(s) | 75 |
| Sau96I | GGNCC | 2 cut(s) | 143, 236 |
| SetI | ASST | 4 cut(s) | 65, 214, 241, 279 |
| SinI | GGWCC | 2 cut(s) | 143, 236 |
| Sse9I | AATT | 4 cut(s) | 181, 193, 223, 260 |
| TaiI | ACGT | 1 cut(s) | 214 |
| TaqII | GACCGA | 1 cut(s) | 131 |
| TasI | AATT | 4 cut(s) | 181, 193, 223, 260 |
| TfiI | GAWTC | 1 cut(s) | 69 |
| Tru1I | TTAA | 1 cut(s) | 192 |
| Tru9I | TTAA | 1 cut(s) | 192 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| VpaK11BI | GGWCC | 2 cut(s) | 143, 236 |
| VspI | ATTAAT | 1 cut(s) | 192 |
| XapI | RAATTY | 1 cut(s) | 260 |
| XceI | RCATGY | 2 cut(s) | 46, 173 |