Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0005454

Physical Location & Seq

Genomic Coordinates Forward (+)

19913178 .. 19922956

Gene Structure 9779 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG181500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2472 bp

ATGGATGCAAGCAAGGAAGAGTTTGTCAGAGAGTTTGGGGAGCACTATGGATACCCCAACGGCCCCAAATCCATCGACGAAATCCGAGCAACCGAGTTTAAGCGATTAGATGGAAATGTGTACTTGGATCATGCTGGGGCTACTTTGTACTCTGAGTTGCAGCTGGAAGCAATCTTTAAGGATTTAAATGTCAATGTGTATGGAAACCCACATAGCCAAAGTGATACCAGTTCTGCCACAAGTGACATTGTAAGGGAAGCCCGCCAACAGGTCCTCGACTACTGTAAAGCATCACCAAAAGAATACAGCTGCATATTCACTTCTGGGGCAACAGCTGCACTGAAGCTTGTAGGGGAGGCCTTTCCTTGGAGCTCTCAGAGCTGTTTTACATACACGACAGAGAATCACAACAGTGTCCTTGGGATTAGAGAATATGCTCTTGGTCAAGGCGCTGCAGCCTCTGCAATAGATATTGAAGAGCATGTGCATCATGGAGTATCAGGTGGTAGTGTATCATCCATGAGGGTCTTGCAGCACGAAGTACAGAGAAGAAATAAAGCTAGATCTATGGAGGAGGAACCAACAGGTGGTGCATATAACTTATTCGCTTTCCCATCAGAGTGTAATTTCTCAGGATTACGATTCAGCCTTGACTTGGTGAAGATAATCAAAGAAGATCCCAAAAGAATTATGGAAGGCTCTCCATTTTGCAATGGCCGCTGGATGGTCTTGATTGATGCTGCAAAAGGATATGCCACAGAACCACCAGATTTATCACTGTATCCGGCAGATTTTGTTGTTATATCTTTCTATAAGGTATATATTCTATTTGGTTATCCAACTGGACTTGGCGCACTCATTGCTCGAAATGATGCTGCTAGAGTACTGAAGAAAACTTACTTCAGTGGAGGTACAGTTGCTGCCTCAATTGCTGACATCGACTTCGTTAAAAGAAGAAAAAGTGTGGAAGAGCTGTTTGAGGATGGCACCATTTCATACCTGAGCATAGCATCTATTCAACATGGGTTCAAAATTCTGAATTCACTGACTGTATCTGCCATATCTCGGCATACAGCATCACTTGCCTTGTATGTAAGGAAGAAGCTCCTGGCTTTGAGGCATGAAAATGGAGCCAAGGTTTGCACACTTTATGGCATGTCAAAGGCATTATGTCGTGGATTTGGTCCAACAGTCTCATTCAACTTGAAAAGGTCGGATGGCACTTGGTATGGATACCGTGAAGTTGAAAAACTGGCATCTTTATCTGGAATTCAGTTACGGACAGGATGCTTTTGCAATCCCGGTGCATGTGCTAAATATCTAGGCTTGTCTCACTCTGAACTTCTTTCAAACATTGAGGCTGGCCATGTTTGCTGGGATGATAATGACATTATTCATGGAAAACCTACAGGAGCTGTGAGAGTATCCTTTGGTTATATGTCAACATTTGAAGATGTTAAGATATTTATTGATTTTGTGATAAGTTCCTTTGTAGCATTATCAAATGGGACTGGAAATGGGTATCAAATAAAGCAAGGTCCTGAAAGCAGATTAGAGGCAGGAAGTTACTCTTTGAAGTCTGTTACTGTCTACCCAATAAAATCATGTGCAGGATTCAATGTGGAAAGTTGGCCTCTGAGCAGTTCTGGTCTGCGTCATGATCGGGAATGGGTTCTTACAAGCCTAAGTGGTGAAATCCTTACACAAAAGAAGGTCCCTGAAATGTGCTTCATAAGTACTTTTATTGACCTCAATAAGGGAATATTGTTTGTCGAGTCACCCCGATGCCAAGTGAGACTGCCCATCAACTTTATGTTAAATTCATGTAATGGTGGGAGAGAAGAGATTAATTTACATGGCCAGAGATATGAAGTACAGGCTTACGAAAAGGAAATCAACATGTGGTTTAGCAATGCCATTGGTCGCCCATGCACCTTATTACGTTGTTTTAGTTCAAATTACAACCTTTGCTTGAATAAGAGCAAAAGTACGGATATGTGCAGAACGATGGAGGGCATGTTGAATTTTTCTAATGAAGCTCAGTTCTTATTGATATCGGAGGAAAGTGTATCTGACCTCAACGACAGAATAAAAACAAATGTACAAAAGGGTGCTCAAGGAACAGGAGGAGGTCAAATCAGTCCAATGAGATTTCGGCCCAACCTTGTCATATCTGGTGGTGAACCATATGCTGAAGATGGATGGAGAAACCTTAAAATTGGGAATATGTATTTCACATCCTTGGGCGGATGCAACCGTTGTCAGATGATCAACATTGTTCATGAAGCTGGACAAGTGCGGAAGTCAAATGAACCTTTGGCGACTCTAGCATCATATAGGAGAGTCAAGGGAAAGATCTTCTTTGGGATACTGCTGAAATACGAAAAAAGCATTGTAGGGTGGGATGGCGACGACAAAGATGATGATTTGTGGCTTCAAGTAGGACAAGATGTACATCCAAATATAGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006066 GO:0006082 GO:0006464 GO:0006605 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006807 GO:0006810 GO:0006886 GO:0006950 GO:0006952 GO:0006970 GO:0007154 GO:0007165 GO:0008104 GO:0008150 GO:0008152 GO:0008265 GO:0008299 GO:0008610 GO:0009000 GO:0009058 GO:0009266 GO:0009408 GO:0009409 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009651 GO:0009687 GO:0009688 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009743 GO:0009755 GO:0009756 GO:0009987 GO:0010033 GO:0010118 GO:0010182 GO:0015031 GO:0015833 GO:0016053 GO:0016106 GO:0016114 GO:0016740 GO:0016782 GO:0016783 GO:0016829 GO:0016846 GO:0017038 GO:0018315 GO:0019538 GO:0019752 GO:0023052 GO:0032787 GO:0032870 GO:0033036 GO:0033365 GO:0034613 GO:0036211 GO:0042040 GO:0042221 GO:0042742 GO:0042886 GO:0043170 GO:0043207 GO:0043288 GO:0043289 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0045036 GO:0045037 GO:0045184 GO:0046165 GO:0046394 GO:0046907 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051704 GO:0051707 GO:0051716 GO:0055085 GO:0065002 GO:0065007 GO:0070727 GO:0070887 GO:0071310 GO:0071322 GO:0071365 GO:0071495 GO:0071702 GO:0071704 GO:0071705 GO:0071806 GO:0072330 GO:0072594 GO:0072596 GO:0072598 GO:0098542 GO:1901564 GO:1901576 GO:1901615 GO:1901617 GO:1901700 GO:1901701 GO:1902644 GO:1902645

KEGG Pathways

Metabolic & Signaling

ko00790 map00790

Pfam Domains

Protein Families

Aminotran_5 MOSC MOSC_N

Protein Analysis

823

Amino Acids

91.28

Weight (kDa)

6.82

Isoelectric Point (pI)

37.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aminotran_5	PF00266	40 - 160	2e-08	Aminotransferase class-V
Aminotran_5	PF00266	242 - 489	3.6e-17	Aminotransferase class-V
MOSC_N	PF03476	524 - 643	8.6e-19	MOSC N-terminal beta barrel domain
MOSC	PF03473	674 - 797	2.4e-20	MOSC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005454)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16540 AT1G16540 AT1G16540
fragaria_vesca	FvH4_3g15600 FvH4_3g15600 FvH4_3g15600 FvH4_3g15600
malus_domestica	MD05G1221200.v1.1
prunus_persica	Prupe.4G138400_v2.0.a1 Prupe.4G138400_v2.0.a1 Prupe.4G138400_v2.0.a1 Prupe.4G138400_v2.0.a1 Prupe.4G138400_v2.0.a1 Prupe.4G138400_v2.0.a1 Prupe.4G138400_v2.0.a1 Prupe.4G138400_v2.0.a1 Prupe.4G138400_v2.0.a1 Prupe.4G138400_v2.0.a1
pyrus_communis	pycom05g20450
rosa_chinensis	RchiOBHm_Chr5g0026221
rosa_laevigata	RLG00000032914
rosa_multiflora	Rmu_sc0000632.1_g000002
rosa_roxburghii	Rroxscaffold_1G00053090
rosa_rugosa	Rorug05G0091600
rosa_samantha	Rh5AG184600 Rh5BG181500 Rh5CG200700 Rh5DG183200
rosa_wichuraiana	Rw5G016740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	986
AccB7I	CCANNNNNTGG	1 cut(s)	587
AccI	GTMKAC	1 cut(s)	1590
AciI	CCGC	4 cut(s)	262, 718, 2247, 2299
AclWI	GGATC	2 cut(s)	135, 671
AcoI	YGGCCR	3 cut(s)	715, 1363, 1858
AcsI	RAATTY	5 cut(s)	1032, 1039, 1269, 1819, 2023
AcuI	CTGAAG	4 cut(s)	362, 886, 908, 2214
AfiI	CCNNNNNNNGG	7 cut(s)	268, 366, 587, 655, 724, 1065, 1756
AflIII	ACRYGT	1 cut(s)	1899
AjnI	CCWGG	1 cut(s)	1107
AjuI	GAANNNNNNNTTGG	2 cut(s)	423, 455
AleI	CACNNNNGTG	1 cut(s)	411
Alw21I	GWGCWC	3 cut(s)	45, 374, 2116
Alw26I	GTCTC	3 cut(s)	1198, 1335, 1789
AlwI	GGATC	2 cut(s)	135, 671
AlwNI	CAGNNNCTG	3 cut(s)	461, 920, 1415
AoxI	GGCC	7 cut(s)	61, 357, 715, 1363, 1631, 1858, 2156
ApeKI	GCWGC	9 cut(s)	160, 309, 335, 452, 455, 532, 740, 875, 920
ApoI	RAATTY	5 cut(s)	1032, 1039, 1269, 1819, 2023
ArsI	GACNNNNNNTTYG	2 cut(s)	926, 958
AseI	ATTAAT	1 cut(s)	1848
Asp700I	GAANNNNTTC	1 cut(s)	1671
AspLEI	GCGC	2 cut(s)	452, 854
AspS9I	GGNCC	6 cut(s)	62, 271, 1184, 1538, 1714, 2157
AsuC2I	CCSGG	1 cut(s)	1302
AsuHPI	GGTGA	5 cut(s)	285, 670, 1703, 1770, 2192
AvaII	GGWCC	4 cut(s)	271, 1184, 1538, 1714
BalI	TGGCCA	2 cut(s)	1365, 1860
BanI	GGYRCC	1 cut(s)	986
BanII	GRGCYC	1 cut(s)	374
BarI	GAAGNNNNNNTAC	2 cut(s)	881, 913
Bbv12I	GWGCWC	3 cut(s)	45, 374, 2116
BbvI	GCAGC	9 cut(s)	172, 296, 322, 439, 467, 544, 727, 862, 907
BceAI	ACGGC	1 cut(s)	76
BciT130I	CCWGG	1 cut(s)	1109
BciVI	GTATCC	5 cut(s)	44, 792, 1226, 1435, 2361
BclI	TGATCA	1 cut(s)	2268
BcnI	CCSGG	1 cut(s)	1302
BcoDI	GTCTC	3 cut(s)	1198, 1335, 1789
BfaI	CTAG	4 cut(s)	561, 879, 1322, 2327
BfmI	CTRYAG	2 cut(s)	453, 1407
BfoI	RGCGCY	1 cut(s)	453
BfuI	GTATCC	5 cut(s)	44, 792, 1226, 1435, 2361
BglII	AGATCT	2 cut(s)	563, 2355
BmcAI	AGTACT	2 cut(s)	885, 1738
Bme1390I	CCNGG	2 cut(s)	1109, 1302
Bme18I	GGWCC	4 cut(s)	271, 1184, 1538, 1714
BmgT120I	GGNCC	6 cut(s)	62, 271, 1184, 1538, 1714, 2157
BmiI	GGNNCC	5 cut(s)	64, 579, 988, 1132, 1716
BmrFI	CCNGG	2 cut(s)	1109, 1302
Bpu10I	CCTNAGC	1 cut(s)	1001
BpuEI	CTTGAG	1 cut(s)	2100
BpuMI	CCSGG	1 cut(s)	1302
BsaBI	GATNNNNATC	1 cut(s)	2454
BsaJI	CCNNGG	4 cut(s)	365, 418, 1134, 2241
BsaXI	ACNNNNNCTCC	6 cut(s)	900, 930, 1122, 1152, 2003, 2033
Bsc4I	CCNNNNNNNGG	7 cut(s)	268, 366, 587, 655, 724, 1065, 1756
Bse1I	ACTGG	4 cut(s)	228, 847, 1257, 1516
Bse3DI	GCAATG	3 cut(s)	718, 858, 1918
Bse8I	GATNNNNATC	1 cut(s)	2454
BseBI	CCWGG	1 cut(s)	1109
BseDI	CCNNGG	4 cut(s)	365, 418, 1134, 2241
BseJI	GATNNNNATC	1 cut(s)	2454
BseLI	CCNNNNNNNGG	7 cut(s)	268, 366, 587, 655, 724, 1065, 1756
BseMI	GCAATG	3 cut(s)	718, 858, 1918
BseMII	CTCAG	6 cut(s)	144, 389, 645, 992, 1628, 2054
BseNI	ACTGG	4 cut(s)	228, 847, 1257, 1516
BseRI	GAGGAG	2 cut(s)	587, 2142
BseXI	GCAGC	9 cut(s)	172, 296, 322, 439, 467, 544, 727, 862, 907
BseYI	CCCAGC	2 cut(s)	134, 1374
BsgI	GTGCAG	3 cut(s)	321, 1629, 2020
BshFI	GGCC	7 cut(s)	63, 359, 717, 1365, 1633, 1860, 2158
BshNI	GGYRCC	1 cut(s)	986
BsiHKAI	GWGCWC	3 cut(s)	45, 374, 2116
BsiSI	CCGG	2 cut(s)	785, 1302
BslFI	GGGAC	2 cut(s)	1522, 1700
BslI	CCNNNNNNNGG	7 cut(s)	268, 366, 587, 655, 724, 1065, 1756
BsmAI	GTCTC	3 cut(s)	1198, 1335, 1789
BsmFI	GGGAC	2 cut(s)	1522, 1700
BsnI	GGCC	7 cut(s)	63, 359, 717, 1365, 1633, 1860, 2158
Bsp1286I	GDGCHC	3 cut(s)	45, 374, 2116
Bsp1407I	TGTACA	2 cut(s)	2101, 2452
Bsp143I	GATC	6 cut(s)	127, 563, 676, 1660, 2268, 2355
BspACI	CCGC	4 cut(s)	262, 718, 2247, 2299
BspANI	GGCC	7 cut(s)	63, 359, 717, 1365, 1633, 1860, 2158
BspCNI	CTCAG	6 cut(s)	145, 388, 644, 993, 1629, 2053
BspHI	TCATGA	2 cut(s)	1657, 2281
BspLI	GGNNCC	5 cut(s)	64, 579, 988, 1132, 1716
BspMAI	CTGCAG	1 cut(s)	457
BspPI	GGATC	2 cut(s)	135, 671
BspQI	GCTCTTC	2 cut(s)	471, 963
BspT107I	GGYRCC	1 cut(s)	986
BsrDI	GCAATG	3 cut(s)	718, 858, 1918
BsrGI	TGTACA	2 cut(s)	2101, 2452
BsrI	ACTGG	4 cut(s)	228, 847, 1257, 1516
BssECI	CCNNGG	4 cut(s)	365, 418, 1134, 2241
BssMI	GATC	6 cut(s)	127, 563, 676, 1660, 2268, 2355
BssT1I	CCWWGG	4 cut(s)	365, 418, 1134, 2241
Bst2UI	CCWGG	1 cut(s)	1109
Bst4CI	ACNGT	9 cut(s)	284, 413, 780, 916, 1051, 1192, 1238, 1588, 2258
Bst6I	CTCTTC	4 cut(s)	12, 471, 963, 1836
BstAPI	GCANNNNNTGC	4 cut(s)	335, 461, 860, 1082
BstAUI	TGTACA	2 cut(s)	2101, 2452
BstC8I	GCNNGC	3 cut(s)	10, 262, 1363
BstDEI	CTNAG	7 cut(s)	153, 375, 631, 1001, 1637, 1685, 2040
BstENI	CCTNNNNNAGG	1 cut(s)	1754
BstH2I	RGCGCY	1 cut(s)	453
BstHHI	GCGC	2 cut(s)	452, 854
BstKTI	GATC	6 cut(s)	130, 566, 679, 1663, 2271, 2358
BstMAI	GTCTC	3 cut(s)	1198, 1335, 1789
BstMBI	GATC	6 cut(s)	127, 563, 676, 1660, 2268, 2355
BstMWI	GCNNNNNNNGC	9 cut(s)	335, 378, 461, 717, 860, 929, 1082, 1371, 2327
BstNI	CCWGG	1 cut(s)	1109
BstNSI	RCATGY	5 cut(s)	485, 1159, 1311, 1903, 2020
BstSCI	CCNGG	2 cut(s)	1107, 1300
BstSFI	CTRYAG	2 cut(s)	453, 1407
BstV1I	GCAGC	9 cut(s)	172, 296, 322, 439, 467, 544, 727, 862, 907
BstX2I	RGATCY	3 cut(s)	563, 676, 2355
BstYI	RGATCY	3 cut(s)	563, 676, 2355
BsuI	GTATCC	5 cut(s)	44, 792, 1226, 1435, 2361
BsuRI	GGCC	7 cut(s)	63, 359, 717, 1365, 1633, 1860, 2158
BtsIMutI	CAGTG	5 cut(s)	338, 418, 776, 910, 1043
Cac8I	GCNNGC	3 cut(s)	10, 262, 1363
CaiI	CAGNNNCTG	3 cut(s)	461, 920, 1415
CciI	TCATGA	2 cut(s)	1657, 2281
CfoI	GCGC	2 cut(s)	452, 854
Cfr13I	GGNCC	6 cut(s)	62, 271, 1184, 1538, 1714, 2157
CseI	GACGC	1 cut(s)	1643
DdeI	CTNAG	7 cut(s)	153, 375, 631, 1001, 1637, 1685, 2040
DpnI	GATC	6 cut(s)	129, 565, 678, 1662, 2270, 2357
DpnII	GATC	6 cut(s)	127, 563, 676, 1660, 2268, 2355
DraI	TTTAAA	1 cut(s)	186
EaeI	YGGCCR	3 cut(s)	715, 1363, 1858
Eam1104I	CTCTTC	4 cut(s)	12, 471, 963, 1836
EarI	CTCTTC	4 cut(s)	12, 471, 963, 1836
EciI	GGCGGA	1 cut(s)	2262
Ecl136II	GAGCTC	1 cut(s)	372
Eco130I	CCWWGG	4 cut(s)	365, 418, 1134, 2241
Eco147I	AGGCCT	1 cut(s)	359
Eco24I	GRGCYC	1 cut(s)	374
Eco32I	GATATC	1 cut(s)	2055
Eco47I	GGWCC	4 cut(s)	271, 1184, 1538, 1714
Eco53kI	GAGCTC	1 cut(s)	372
Eco57I	CTGAAG	4 cut(s)	362, 886, 908, 2214
EcoICRI	GAGCTC	1 cut(s)	372
EcoNI	CCTNNNNNAGG	1 cut(s)	1754
EcoO109I	RGGNCCY	3 cut(s)	271, 1538, 1714
EcoRI	GAATTC	2 cut(s)	1039, 1269
EcoRII	CCWGG	1 cut(s)	1107
EcoRV	GATATC	1 cut(s)	2055
EcoT14I	CCWWGG	4 cut(s)	365, 418, 1134, 2241
EcoT38I	GRGCYC	1 cut(s)	374
ErhI	CCWWGG	4 cut(s)	365, 418, 1134, 2241
FalI	AAGNNNNNCTT	4 cut(s)	1555, 1587, 2345, 2377
FaqI	GGGAC	2 cut(s)	1522, 1700
FauI	CCCGC	1 cut(s)	269
FauNDI	CATATG	1 cut(s)	2188
FbaI	TGATCA	1 cut(s)	2268
FblI	GTMKAC	1 cut(s)	1590
FriOI	GRGCYC	1 cut(s)	374
FspBI	CTAG	4 cut(s)	561, 879, 1322, 2327
GlaI	GCGC	2 cut(s)	451, 853
GsaI	CCCAGC	2 cut(s)	138, 1378
HaeII	RGCGCY	1 cut(s)	453
HaeIII	GGCC	7 cut(s)	63, 359, 717, 1365, 1633, 1860, 2158
HapII	CCGG	2 cut(s)	785, 1302
HgaI	GACGC	1 cut(s)	1643
HhaI	GCGC	2 cut(s)	452, 854
Hin6I	GCGC	2 cut(s)	450, 852
HinP1I	GCGC	2 cut(s)	450, 852
HincII	GTYRAC	1 cut(s)	1443
HindII	GTYRAC	1 cut(s)	1443
HindIII	AAGCTT	1 cut(s)	344
HinfI	GANTC	6 cut(s)	403, 642, 1614, 1775, 2323, 2343
HpaII	CCGG	2 cut(s)	785, 1302
HphI	GGTGA	5 cut(s)	285, 670, 1703, 1770, 2192
Hpy166II	GTNNAC	4 cut(s)	121, 1443, 1591, 2183
Hpy188III	TCNNGA	7 cut(s)	633, 730, 1266, 1541, 1658, 1664, 2282
Hpy8I	GTNNAC	4 cut(s)	121, 1443, 1591, 2183
Hpy99I	CGWCG	2 cut(s)	80, 2414
HpyAV	CCTTC	2 cut(s)	689, 1705
HpyCH4III	ACNGT	9 cut(s)	284, 413, 780, 916, 1051, 1192, 1238, 1588, 2258
HpyCH4IV	ACGT	1 cut(s)	1942
HpyF10VI	GCNNNNNNNGC	9 cut(s)	335, 378, 461, 717, 860, 929, 1082, 1371, 2327
HpyF3I	CTNAG	7 cut(s)	153, 375, 631, 1001, 1637, 1685, 2040
HpySE526I	ACGT	1 cut(s)	1942
HspAI	GCGC	2 cut(s)	450, 852
Ksp22I	TGATCA	1 cut(s)	2268
Kzo9I	GATC	6 cut(s)	127, 563, 676, 1660, 2268, 2355
LguI	GCTCTTC	2 cut(s)	471, 963
LmnI	GCTCC	5 cut(s)	40, 369, 1110, 1130, 1412
Lsp1109I	GCAGC	9 cut(s)	172, 296, 322, 439, 467, 544, 727, 862, 907
MaeI	CTAG	4 cut(s)	561, 879, 1322, 2327
MaeII	ACGT	1 cut(s)	1942
MaeIII	GTNAC	5 cut(s)	242, 1275, 1565, 1582, 1776
MalI	GATC	6 cut(s)	129, 565, 678, 1662, 2270, 2357
MboI	GATC	6 cut(s)	127, 563, 676, 1660, 2268, 2355
MfeI	CAATTG	1 cut(s)	927
MflI	RGATCY	3 cut(s)	563, 676, 2355
MhlI	GDGCHC	3 cut(s)	45, 374, 2116
MlsI	TGGCCA	2 cut(s)	1365, 1860
MluNI	TGGCCA	2 cut(s)	1365, 1860
MlyI	GAGTC	3 cut(s)	1784, 2317, 2352
MmeI	TCCRAC	3 cut(s)	863, 1194, 1211
Mox20I	TGGCCA	2 cut(s)	1365, 1860
MroXI	GAANNNNTTC	1 cut(s)	1671
MscI	TGGCCA	2 cut(s)	1365, 1860
MseI	TTAA	8 cut(s)	99, 177, 185, 948, 1458, 1817, 1848, 2214
MslI	CAYNNNNRTG	4 cut(s)	411, 619, 1125, 1783
Msp20I	TGGCCA	2 cut(s)	1365, 1860
MspA1I	CMGCKG	4 cut(s)	163, 309, 335, 720
MspI	CCGG	2 cut(s)	785, 1302
MspR9I	CCNGG	2 cut(s)	1109, 1302
MunI	CAATTG	1 cut(s)	927
MvaI	CCWGG	1 cut(s)	1109
MwoI	GCNNNNNNNGC	9 cut(s)	335, 378, 461, 717, 860, 929, 1082, 1371, 2327
NciI	CCSGG	1 cut(s)	1302
NdeI	CATATG	1 cut(s)	2188
NdeII	GATC	6 cut(s)	127, 563, 676, 1660, 2268, 2355
NlaIV	GGNNCC	5 cut(s)	64, 579, 988, 1132, 1716
NmeAIII	GCCGAG	1 cut(s)	1045
NmuCI	GTSAC	2 cut(s)	242, 1776
NspI	RCATGY	5 cut(s)	485, 1159, 1311, 1903, 2020
OliI	CACNNNNGTG	1 cut(s)	411
PagI	TCATGA	2 cut(s)	1657, 2281
PceI	AGGCCT	1 cut(s)	359
PciI	ACATGT	1 cut(s)	1899
PciSI	GCTCTTC	2 cut(s)	471, 963
PdmI	GAANNNNTTC	1 cut(s)	1671
PfeI	GAWTC	3 cut(s)	403, 642, 1614
PflMI	CCANNNNNTGG	1 cut(s)	587
PleI	GAGTC	3 cut(s)	1783, 2317, 2351
PpsI	GAGTC	3 cut(s)	1783, 2317, 2351
PpuMI	RGGWCCY	3 cut(s)	271, 1538, 1714
PscI	ACATGT	1 cut(s)	1899
PshBI	ATTAAT	1 cut(s)	1848
Psp124BI	GAGCTC	1 cut(s)	374
Psp5II	RGGWCCY	3 cut(s)	271, 1538, 1714
Psp6I	CCWGG	1 cut(s)	1107
PspFI	CCCAGC	2 cut(s)	134, 1374
PspGI	CCWGG	1 cut(s)	1107
PspN4I	GGNNCC	5 cut(s)	64, 579, 988, 1132, 1716
PspPI	GGNCC	6 cut(s)	62, 271, 1184, 1538, 1714, 2157
PspPPI	RGGWCCY	3 cut(s)	271, 1538, 1714
PstI	CTGCAG	1 cut(s)	457
PstNI	CAGNNNCTG	3 cut(s)	461, 920, 1415
PsuI	RGATCY	3 cut(s)	563, 676, 2355
PvuII	CAGCTG	3 cut(s)	163, 309, 335
RseI	CAYNNNNRTG	4 cut(s)	411, 619, 1125, 1783
SacI	GAGCTC	1 cut(s)	374
SapI	GCTCTTC	2 cut(s)	471, 963
SaqAI	TTAA	8 cut(s)	99, 177, 185, 948, 1458, 1817, 1848, 2214
Sau3AI	GATC	6 cut(s)	127, 563, 676, 1660, 2268, 2355
Sau96I	GGNCC	6 cut(s)	62, 271, 1184, 1538, 1714, 2157
ScaI	AGTACT	2 cut(s)	885, 1738
SchI	GAGTC	3 cut(s)	1784, 2317, 2352
ScrFI	CCNGG	2 cut(s)	1109, 1302
SduI	GDGCHC	3 cut(s)	45, 374, 2116
SfcI	CTRYAG	2 cut(s)	453, 1407
SinI	GGWCC	4 cut(s)	271, 1184, 1538, 1714
SmiI	ATTTAAAT	1 cut(s)	186
SmiMI	CAYNNNNRTG	4 cut(s)	411, 619, 1125, 1783
SmlI	CTYRAG	1 cut(s)	2115
SmoI	CTYRAG	1 cut(s)	2115
SseBI	AGGCCT	1 cut(s)	359
SsiI	CCGC	4 cut(s)	262, 718, 2247, 2299
SspI	AATATT	1 cut(s)	1764
SspMI	CTAG	4 cut(s)	561, 879, 1322, 2327
SstI	GAGCTC	1 cut(s)	374
StuI	AGGCCT	1 cut(s)	359
StyD4I	CCNGG	2 cut(s)	1107, 1300
StyI	CCWWGG	4 cut(s)	365, 418, 1134, 2241
SwaI	ATTTAAAT	1 cut(s)	186
TaaI	ACNGT	9 cut(s)	284, 413, 780, 916, 1051, 1192, 1238, 1588, 2258
TaiI	ACGT	1 cut(s)	1945
TaqI	TCGA	5 cut(s)	75, 276, 865, 939, 1773
TatI	WGTACW	8 cut(s)	120, 147, 541, 883, 1736, 1873, 2101, 2452
TauI	GCSGC	1 cut(s)	720
TfiI	GAWTC	3 cut(s)	403, 642, 1614
Tru1I	TTAA	8 cut(s)	99, 177, 185, 948, 1458, 1817, 1848, 2214
Tru9I	TTAA	8 cut(s)	99, 177, 185, 948, 1458, 1817, 1848, 2214
TscAI	CASTG	5 cut(s)	345, 418, 783, 910, 1050
TseFI	GTSAC	2 cut(s)	242, 1776
TseI	GCWGC	9 cut(s)	160, 309, 335, 452, 455, 532, 740, 875, 920
Tsp45I	GTSAC	2 cut(s)	242, 1776
TspGWI	ACGGA	2 cut(s)	1294, 2006
TspRI	CASTG	5 cut(s)	345, 418, 783, 910, 1050
Van91I	CCANNNNNTGG	1 cut(s)	587
VpaK11BI	GGWCC	4 cut(s)	271, 1184, 1538, 1714
VspI	ATTAAT	1 cut(s)	1848
XagI	CCTNNNNNAGG	1 cut(s)	1754
XapI	RAATTY	5 cut(s)	1032, 1039, 1269, 1819, 2023
XceI	RCATGY	5 cut(s)	485, 1159, 1311, 1903, 2020
XcmI	CCANNNNNNNNNTGG	1 cut(s)	688
XmiI	GTMKAC	1 cut(s)	1590
XmnI	GAANNNNTTC	1 cut(s)	1671
XspI	CTAG	4 cut(s)	561, 879, 1322, 2327
ZrmI	AGTACT	2 cut(s)	885, 1738

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.