actin binding
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0072481 |
| rosa_multiflora | Rmu_sc0000762.1_g000014 |
| rosa_roxburghii | Rroxscaffold_3G00257690 Rroxscaffold_5G00347300 Rroxscaffold_6G00398670 Rroxscaffold_6G00409190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 331 |
| AciI | CCGC | 2 cut(s) | 363, 679 |
| AclWI | GGATC | 3 cut(s) | 113, 260, 638 |
| AcsI | RAATTY | 2 cut(s) | 429, 718 |
| AcuI | CTGAAG | 1 cut(s) | 108 |
| AfaI | GTAC | 1 cut(s) | 148 |
| AgsI | TTSAA | 2 cut(s) | 259, 461 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 498, 530 |
| AluBI | AGCT | 2 cut(s) | 232, 689 |
| AluI | AGCT | 2 cut(s) | 232, 689 |
| Alw21I | GWGCWC | 1 cut(s) | 691 |
| Alw26I | GTCTC | 1 cut(s) | 479 |
| AlwI | GGATC | 3 cut(s) | 113, 260, 638 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 232 |
| Ama87I | CYCGRG | 1 cut(s) | 13 |
| ApeKI | GCWGC | 2 cut(s) | 232, 443 |
| ApoI | RAATTY | 2 cut(s) | 429, 718 |
| AsuHPI | GGTGA | 1 cut(s) | 647 |
| AvaI | CYCGRG | 1 cut(s) | 13 |
| BanII | GRGCYC | 1 cut(s) | 691 |
| BbsI | GAAGAC | 1 cut(s) | 88 |
| Bbv12I | GWGCWC | 1 cut(s) | 691 |
| BbvCI | CCTCAGC | 1 cut(s) | 330 |
| BbvI | GCAGC | 2 cut(s) | 219, 430 |
| BccI | CCATC | 1 cut(s) | 507 |
| BcoDI | GTCTC | 1 cut(s) | 479 |
| BfmI | CTRYAG | 1 cut(s) | 233 |
| BfuAI | ACCTGC | 1 cut(s) | 331 |
| BisI | GCNGC | 3 cut(s) | 233, 363, 444 |
| BlsI | GCNGC | 3 cut(s) | 234, 364, 445 |
| BmeT110I | CYCGRG | 1 cut(s) | 13 |
| BmrI | ACTGGG | 1 cut(s) | 95 |
| BmuI | ACTGGG | 1 cut(s) | 95 |
| BpiI | GAAGAC | 1 cut(s) | 88 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 204, 236 |
| Bpu10I | CCTNAGC | 1 cut(s) | 330 |
| BpuEI | CTTGAG | 1 cut(s) | 65 |
| Bse1I | ACTGG | 1 cut(s) | 101 |
| BseMII | CTCAG | 1 cut(s) | 344 |
| BseNI | ACTGG | 1 cut(s) | 101 |
| BseRI | GAGGAG | 3 cut(s) | 31, 391, 614 |
| BseXI | GCAGC | 2 cut(s) | 219, 430 |
| BseYI | CCCAGC | 1 cut(s) | 248 |
| BsgI | GTGCAG | 1 cut(s) | 429 |
| Bsh1285I | CGRYCG | 1 cut(s) | 169 |
| BsiEI | CGRYCG | 1 cut(s) | 169 |
| BsiHKAI | GWGCWC | 1 cut(s) | 691 |
| BsiHKCI | CYCGRG | 1 cut(s) | 13 |
| BsmAI | GTCTC | 1 cut(s) | 479 |
| BsoBI | CYCGRG | 1 cut(s) | 13 |
| Bsp1286I | GDGCHC | 1 cut(s) | 691 |
| Bsp143I | GATC | 5 cut(s) | 60, 118, 166, 252, 643 |
| BspACI | CCGC | 2 cut(s) | 363, 679 |
| BspCNI | CTCAG | 1 cut(s) | 343 |
| BspMAI | CTGCAG | 1 cut(s) | 237 |
| BspMI | ACCTGC | 1 cut(s) | 331 |
| BspPI | GGATC | 3 cut(s) | 113, 260, 638 |
| BsrI | ACTGG | 1 cut(s) | 101 |
| BssMI | GATC | 5 cut(s) | 60, 118, 166, 252, 643 |
| Bst4CI | ACNGT | 2 cut(s) | 201, 293 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 346 |
| BstDEI | CTNAG | 1 cut(s) | 330 |
| BstKTI | GATC | 5 cut(s) | 63, 121, 169, 255, 646 |
| BstMAI | GTCTC | 1 cut(s) | 479 |
| BstMBI | GATC | 5 cut(s) | 60, 118, 166, 252, 643 |
| BstMCI | CGRYCG | 1 cut(s) | 169 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 308, 317, 346 |
| BstSFI | CTRYAG | 1 cut(s) | 233 |
| BstV1I | GCAGC | 2 cut(s) | 219, 430 |
| BstV2I | GAAGAC | 1 cut(s) | 88 |
| BstX2I | RGATCY | 2 cut(s) | 252, 643 |
| BstYI | RGATCY | 2 cut(s) | 252, 643 |
| BtsI | GCAGTG | 1 cut(s) | 609 |
| BtsIMutI | CAGTG | 2 cut(s) | 108, 609 |
| BveI | ACCTGC | 1 cut(s) | 331 |
| CaiI | CAGNNNCTG | 1 cut(s) | 232 |
| Csp6I | GTAC | 1 cut(s) | 147 |
| CviAII | CATG | 2 cut(s) | 64, 346 |
| CviJI | RGCY | 9 cut(s) | 52, 232, 248, 320, 467, 495, 608, 689, 752 |
| CviKI_1 | RGCY | 9 cut(s) | 52, 232, 248, 320, 467, 495, 608, 689, 752 |
| CviQI | GTAC | 1 cut(s) | 147 |
| DdeI | CTNAG | 1 cut(s) | 330 |
| DpnI | GATC | 5 cut(s) | 62, 120, 168, 254, 645 |
| DpnII | GATC | 5 cut(s) | 60, 118, 166, 252, 643 |
| Ecl136II | GAGCTC | 1 cut(s) | 689 |
| Eco24I | GRGCYC | 1 cut(s) | 691 |
| Eco53kI | GAGCTC | 1 cut(s) | 689 |
| Eco57I | CTGAAG | 1 cut(s) | 108 |
| Eco88I | CYCGRG | 1 cut(s) | 13 |
| EcoICRI | GAGCTC | 1 cut(s) | 689 |
| EcoRI | GAATTC | 1 cut(s) | 429 |
| EcoT38I | GRGCYC | 1 cut(s) | 691 |
| FaeI | CATG | 2 cut(s) | 67, 349 |
| FatI | CATG | 2 cut(s) | 63, 345 |
| Fnu4HI | GCNGC | 3 cut(s) | 233, 363, 444 |
| FriOI | GRGCYC | 1 cut(s) | 691 |
| Fsp4HI | GCNGC | 3 cut(s) | 233, 363, 444 |
| GluI | GCNGC | 3 cut(s) | 233, 363, 444 |
| GsaI | CCCAGC | 1 cut(s) | 252 |
| Hin1II | CATG | 2 cut(s) | 67, 349 |
| HinfI | GANTC | 3 cut(s) | 29, 275, 710 |
| HphI | GGTGA | 1 cut(s) | 647 |
| Hpy188I | TCNGA | 6 cut(s) | 127, 171, 373, 479, 492, 559 |
| Hpy188III | TCNNGA | 3 cut(s) | 13, 44, 133 |
| HpyAV | CCTTC | 4 cut(s) | 132, 524, 538, 662 |
| HpyCH4III | ACNGT | 2 cut(s) | 201, 293 |
| HpyCH4V | TGCA | 7 cut(s) | 155, 204, 235, 340, 349, 446, 738 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 308, 317, 346 |
| HpyF3I | CTNAG | 1 cut(s) | 330 |
| Hsp92II | CATG | 2 cut(s) | 67, 349 |
| Kzo9I | GATC | 5 cut(s) | 60, 118, 166, 252, 643 |
| LpnPI | CCDG | 9 cut(s) | 114, 118, 230, 234, 326, 334, 449, 603, 654 |
| Lsp1109I | GCAGC | 2 cut(s) | 219, 430 |
| MaeIII | GTNAC | 1 cut(s) | 542 |
| MalI | GATC | 5 cut(s) | 62, 120, 168, 254, 645 |
| MboI | GATC | 5 cut(s) | 60, 118, 166, 252, 643 |
| MboII | GAAGA | 3 cut(s) | 88, 203, 247 |
| MflI | RGATCY | 2 cut(s) | 252, 643 |
| MhlI | GDGCHC | 1 cut(s) | 691 |
| MluCI | AATT | 5 cut(s) | 34, 380, 429, 699, 718 |
| MmeI | TCCRAC | 2 cut(s) | 190, 582 |
| MseI | TTAA | 3 cut(s) | 56, 111, 383 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 308, 317, 346 |
| NdeII | GATC | 5 cut(s) | 60, 118, 166, 252, 643 |
| NlaIII | CATG | 2 cut(s) | 67, 349 |
| NmuCI | GTSAC | 1 cut(s) | 542 |
| PaeR7I | CTCGAG | 1 cut(s) | 13 |
| PfeI | GAWTC | 3 cut(s) | 29, 275, 710 |
| PkrI | GCNGC | 3 cut(s) | 234, 364, 445 |
| Ple19I | CGATCG | 1 cut(s) | 169 |
| Psp124BI | GAGCTC | 1 cut(s) | 691 |
| PspFI | CCCAGC | 1 cut(s) | 248 |
| PstI | CTGCAG | 1 cut(s) | 237 |
| PstNI | CAGNNNCTG | 1 cut(s) | 232 |
| PsuI | RGATCY | 2 cut(s) | 252, 643 |
| PvuI | CGATCG | 1 cut(s) | 169 |
| RsaI | GTAC | 1 cut(s) | 148 |
| RsaNI | GTAC | 1 cut(s) | 147 |
| SacI | GAGCTC | 1 cut(s) | 691 |
| SaqAI | TTAA | 3 cut(s) | 56, 111, 383 |
| SatI | GCNGC | 3 cut(s) | 233, 363, 444 |
| Sau3AI | GATC | 5 cut(s) | 60, 118, 166, 252, 643 |
| SduI | GDGCHC | 1 cut(s) | 691 |
| SfcI | CTRYAG | 1 cut(s) | 233 |
| Sfr274I | CTCGAG | 1 cut(s) | 13 |
| SlaI | CTCGAG | 1 cut(s) | 13 |
| SmlI | CTYRAG | 2 cut(s) | 13, 44 |
| SmoI | CTYRAG | 2 cut(s) | 13, 44 |
| Sse9I | AATT | 5 cut(s) | 34, 380, 429, 699, 718 |
| SsiI | CCGC | 2 cut(s) | 363, 679 |
| SstI | GAGCTC | 1 cut(s) | 691 |
| TaaI | ACNGT | 2 cut(s) | 201, 293 |
| TaqI | TCGA | 3 cut(s) | 14, 165, 427 |
| TasI | AATT | 5 cut(s) | 34, 380, 429, 699, 718 |
| TauI | GCSGC | 1 cut(s) | 365 |
| TfiI | GAWTC | 3 cut(s) | 29, 275, 710 |
| Tru1I | TTAA | 3 cut(s) | 56, 111, 383 |
| Tru9I | TTAA | 3 cut(s) | 56, 111, 383 |
| TscAI | CASTG | 2 cut(s) | 108, 616 |
| TseFI | GTSAC | 1 cut(s) | 542 |
| TseI | GCWGC | 2 cut(s) | 232, 443 |
| Tsp45I | GTSAC | 1 cut(s) | 542 |
| TspDTI | ATGAA | 1 cut(s) | 204 |
| TspGWI | ACGGA | 1 cut(s) | 268 |
| TspRI | CASTG | 2 cut(s) | 108, 616 |
| XapI | RAATTY | 2 cut(s) | 429, 718 |
| XhoI | CTCGAG | 1 cut(s) | 13 |