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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0072481 |
| rosa_multiflora | Rmu_sc0000762.1_g000014 |
| rosa_roxburghii | Rroxscaffold_3G00257690 Rroxscaffold_5G00347300 Rroxscaffold_6G00398670 Rroxscaffold_6G00409190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 443 |
| AccBSI | CCGCTC | 1 cut(s) | 324 |
| AciI | CCGC | 3 cut(s) | 204, 324, 454 |
| AcsI | RAATTY | 1 cut(s) | 269 |
| AgsI | TTSAA | 3 cut(s) | 220, 301, 553 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 338, 370, 497, 529 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 299, 331 |
| Alw26I | GTCTC | 2 cut(s) | 144, 319 |
| Ama87I | CYCGRG | 2 cut(s) | 49, 159 |
| ApeKI | GCWGC | 2 cut(s) | 183, 377 |
| ApoI | RAATTY | 1 cut(s) | 269 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 37, 69 |
| AsuHPI | GGTGA | 5 cut(s) | 134, 328, 334, 351, 508 |
| AvaI | CYCGRG | 2 cut(s) | 49, 159 |
| BbvI | GCAGC | 2 cut(s) | 170, 364 |
| BccI | CCATC | 1 cut(s) | 347 |
| BceAI | ACGGC | 1 cut(s) | 115 |
| BclI | TGATCA | 1 cut(s) | 64 |
| BcoDI | GTCTC | 2 cut(s) | 144, 319 |
| BfuAI | ACCTGC | 1 cut(s) | 443 |
| BisI | GCNGC | 3 cut(s) | 184, 204, 378 |
| BlsI | GCNGC | 3 cut(s) | 185, 205, 379 |
| BmeT110I | CYCGRG | 2 cut(s) | 49, 159 |
| BmiI | GGNNCC | 1 cut(s) | 177 |
| BmsI | GCATC | 2 cut(s) | 389, 465 |
| BsaI | GGTCTC | 1 cut(s) | 144 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 299, 329 |
| Bse118I | RCCGGY | 1 cut(s) | 172 |
| BseRI | GAGGAG | 3 cut(s) | 168, 231, 477 |
| BseXI | GCAGC | 2 cut(s) | 170, 364 |
| BsiHKCI | CYCGRG | 2 cut(s) | 49, 159 |
| BsiSI | CCGG | 1 cut(s) | 173 |
| BslFI | GGGAC | 2 cut(s) | 18, 39 |
| BsmAI | GTCTC | 2 cut(s) | 144, 319 |
| BsmFI | GGGAC | 2 cut(s) | 18, 39 |
| Bso31I | GGTCTC | 1 cut(s) | 144 |
| BsoBI | CYCGRG | 2 cut(s) | 49, 159 |
| Bsp143I | GATC | 2 cut(s) | 64, 165 |
| BspACI | CCGC | 3 cut(s) | 204, 324, 454 |
| BspLI | GGNNCC | 1 cut(s) | 177 |
| BspMI | ACCTGC | 1 cut(s) | 443 |
| BspTNI | GGTCTC | 1 cut(s) | 144 |
| BsrBI | CCGCTC | 1 cut(s) | 324 |
| BsrFI | RCCGGY | 1 cut(s) | 172 |
| BssAI | RCCGGY | 1 cut(s) | 172 |
| BssMI | GATC | 2 cut(s) | 64, 165 |
| Bst4CI | ACNGT | 1 cut(s) | 334 |
| Bst6I | CTCTTC | 1 cut(s) | 155 |
| BstC8I | GCNNGC | 1 cut(s) | 20 |
| BstEII | GGTNACC | 1 cut(s) | 334 |
| BstKTI | GATC | 2 cut(s) | 67, 168 |
| BstMAI | GTCTC | 2 cut(s) | 144, 319 |
| BstMBI | GATC | 2 cut(s) | 64, 165 |
| BstPI | GGTNACC | 1 cut(s) | 334 |
| BstV1I | GCAGC | 2 cut(s) | 170, 364 |
| BveI | ACCTGC | 1 cut(s) | 443 |
| Cac8I | GCNNGC | 1 cut(s) | 20 |
| Cfr10I | RCCGGY | 1 cut(s) | 172 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 511, 546 |
| CviAII | CATG | 1 cut(s) | 62 |
| CviJI | RGCY | 4 cut(s) | 12, 22, 102, 176 |
| CviKI_1 | RGCY | 4 cut(s) | 12, 22, 102, 176 |
| DpnI | GATC | 2 cut(s) | 66, 167 |
| DpnII | GATC | 2 cut(s) | 64, 165 |
| Eam1104I | CTCTTC | 1 cut(s) | 155 |
| EarI | CTCTTC | 1 cut(s) | 155 |
| Eco31I | GGTCTC | 1 cut(s) | 144 |
| Eco88I | CYCGRG | 2 cut(s) | 49, 159 |
| Eco91I | GGTNACC | 1 cut(s) | 334 |
| EcoO65I | GGTNACC | 1 cut(s) | 334 |
| EcoRI | GAATTC | 1 cut(s) | 269 |
| FaeI | CATG | 1 cut(s) | 65 |
| FaiI | YATR | 3 cut(s) | 8, 63, 80 |
| FaqI | GGGAC | 2 cut(s) | 18, 39 |
| FatI | CATG | 1 cut(s) | 61 |
| FauI | CCCGC | 1 cut(s) | 461 |
| FbaI | TGATCA | 1 cut(s) | 64 |
| Fnu4HI | GCNGC | 3 cut(s) | 184, 204, 378 |
| Fsp4HI | GCNGC | 3 cut(s) | 184, 204, 378 |
| GluI | GCNGC | 3 cut(s) | 184, 204, 378 |
| HapII | CCGG | 1 cut(s) | 173 |
| Hin1II | CATG | 1 cut(s) | 65 |
| HinfI | GANTC | 2 cut(s) | 52, 220 |
| HpaII | CCGG | 1 cut(s) | 173 |
| HphI | GGTGA | 5 cut(s) | 134, 328, 334, 351, 508 |
| Hpy188I | TCNGA | 2 cut(s) | 132, 319 |
| Hpy188III | TCNNGA | 2 cut(s) | 159, 161 |
| Hpy99I | CGWCG | 2 cut(s) | 132, 214 |
| HpyAV | CCTTC | 4 cut(s) | 120, 155, 364, 523 |
| HpyCH4III | ACNGT | 1 cut(s) | 334 |
| HpyCH4V | TGCA | 4 cut(s) | 18, 43, 286, 380 |
| Hsp92II | CATG | 1 cut(s) | 65 |
| Ksp22I | TGATCA | 1 cut(s) | 64 |
| Kzo9I | GATC | 2 cut(s) | 64, 165 |
| LmnI | GCTCC | 1 cut(s) | 181 |
| LpnPI | CCDG | 3 cut(s) | 120, 186, 448 |
| Lsp1109I | GCAGC | 2 cut(s) | 170, 364 |
| LweI | GCATC | 2 cut(s) | 389, 465 |
| MaeIII | GTNAC | 3 cut(s) | 334, 400, 532 |
| MalI | GATC | 2 cut(s) | 66, 167 |
| MbiI | CCGCTC | 1 cut(s) | 324 |
| MboI | GATC | 2 cut(s) | 64, 165 |
| MboII | GAAGA | 2 cut(s) | 142, 145 |
| MluCI | AATT | 3 cut(s) | 215, 269, 528 |
| MlyI | GAGTC | 1 cut(s) | 61 |
| MmeI | TCCRAC | 3 cut(s) | 110, 440, 492 |
| MnlI | CCTC | 9 cut(s) | 189, 201, 217, 241, 249, 252, 285, 488, 498 |
| MspI | CCGG | 1 cut(s) | 173 |
| NdeII | GATC | 2 cut(s) | 64, 165 |
| NlaIII | CATG | 1 cut(s) | 65 |
| NlaIV | GGNNCC | 1 cut(s) | 177 |
| NmuCI | GTSAC | 3 cut(s) | 334, 400, 532 |
| PaeR7I | CTCGAG | 1 cut(s) | 159 |
| PfeI | GAWTC | 1 cut(s) | 220 |
| PflFI | GACNNNGTC | 1 cut(s) | 136 |
| PkrI | GCNGC | 3 cut(s) | 185, 205, 379 |
| PleI | GAGTC | 1 cut(s) | 60 |
| PpsI | GAGTC | 1 cut(s) | 60 |
| PspEI | GGTNACC | 1 cut(s) | 334 |
| PspN4I | GGNNCC | 1 cut(s) | 177 |
| PsyI | GACNNNGTC | 1 cut(s) | 136 |
| SatI | GCNGC | 3 cut(s) | 184, 204, 378 |
| Sau3AI | GATC | 2 cut(s) | 64, 165 |
| SchI | GAGTC | 1 cut(s) | 61 |
| SetI | ASST | 7 cut(s) | 147, 233, 356, 412, 437, 480, 515 |
| SfaNI | GCATC | 2 cut(s) | 389, 465 |
| Sfr274I | CTCGAG | 1 cut(s) | 159 |
| SlaI | CTCGAG | 1 cut(s) | 159 |
| SmlI | CTYRAG | 1 cut(s) | 159 |
| SmoI | CTYRAG | 1 cut(s) | 159 |
| Sse9I | AATT | 3 cut(s) | 215, 269, 528 |
| SsiI | CCGC | 3 cut(s) | 204, 324, 454 |
| TaaI | ACNGT | 1 cut(s) | 334 |
| TaqI | TCGA | 4 cut(s) | 160, 212, 267, 459 |
| TasI | AATT | 3 cut(s) | 215, 269, 528 |
| TauI | GCSGC | 1 cut(s) | 206 |
| TfiI | GAWTC | 1 cut(s) | 220 |
| TseFI | GTSAC | 3 cut(s) | 334, 400, 532 |
| TseI | GCWGC | 2 cut(s) | 183, 377 |
| Tsp45I | GTSAC | 3 cut(s) | 334, 400, 532 |
| Tth111I | GACNNNGTC | 1 cut(s) | 136 |
| XapI | RAATTY | 1 cut(s) | 269 |
| XhoI | CTCGAG | 1 cut(s) | 159 |