Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G31260 |
| fragaria_vesca | FvH4_2g21710 |
| malus_domestica | MD05G1199600.v1.1 MD10G1185900.v1.1 |
| prunus_persica | Prupe.8G225400_v2.0.a1 Prupe.8G225400_v2.0.a1 |
| pyrus_communis | pycom05g18600 pycom10g16080 |
| rosa_chinensis | RchiOBHm_Chr6g0288391 |
| rosa_laevigata | RLG00000012408 |
| rosa_multiflora | Rmu_sc0001038.1_g000011 |
| rosa_roxburghii | Rroxscaffold_7G00180100 |
| rosa_rugosa | Rorug06G0196200 |
| rosa_samantha | Rh6AG307100 Rh6BG313100 Rh6CG320900 Rh6DG306300 |
| rosa_wichuraiana | Rw6G026570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1047 |
| AatII | GACGTC | 1 cut(s) | 2641 |
| AccB1I | GGYRCC | 1 cut(s) | 124 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 501, 612, 788, 1449 |
| AccI | GTMKAC | 2 cut(s) | 1508, 2635 |
| AciI | CCGC | 3 cut(s) | 89, 712, 1585 |
| AclWI | GGATC | 4 cut(s) | 512, 1388, 2211, 2357 |
| AcsI | RAATTY | 7 cut(s) | 898, 1084, 1109, 1217, 1616, 2431, 2603 |
| AcuI | CTGAAG | 4 cut(s) | 438, 2249, 2397, 2657 |
| AcyI | GRCGYC | 1 cut(s) | 2638 |
| AfaI | GTAC | 5 cut(s) | 230, 1161, 1716, 2262, 2338 |
| AflII | CTTAAG | 2 cut(s) | 14, 1024 |
| AjnI | CCWGG | 1 cut(s) | 781 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1115, 1147 |
| Alw21I | GWGCWC | 1 cut(s) | 1061 |
| Alw26I | GTCTC | 1 cut(s) | 33 |
| AlwI | GGATC | 4 cut(s) | 512, 1388, 2211, 2357 |
| Ama87I | CYCGRG | 1 cut(s) | 2250 |
| AoxI | GGCC | 6 cut(s) | 250, 790, 1294, 1536, 2326, 2408 |
| ApeKI | GCWGC | 6 cut(s) | 144, 658, 1247, 1328, 1364, 2122 |
| ApoI | RAATTY | 7 cut(s) | 898, 1084, 1109, 1217, 1616, 2431, 2603 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 200, 232, 2290, 2322 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 423, 1757 |
| AspS9I | GGNCC | 9 cut(s) | 208, 778, 791, 1123, 1294, 1387, 1792, 2188, 2327 |
| AsuC2I | CCSGG | 2 cut(s) | 141, 1902 |
| AsuHPI | GGTGA | 5 cut(s) | 65, 295, 560, 1695, 1890 |
| AvaI | CYCGRG | 1 cut(s) | 2250 |
| AvaII | GGWCC | 6 cut(s) | 208, 778, 1123, 1387, 1792, 2188 |
| AxyI | CCTNAGG | 1 cut(s) | 96 |
| BaeGI | GKGCMC | 1 cut(s) | 127 |
| BanI | GGYRCC | 1 cut(s) | 124 |
| BanII | GRGCYC | 1 cut(s) | 155 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1768, 1800 |
| BbsI | GAAGAC | 1 cut(s) | 344 |
| Bbv12I | GWGCWC | 1 cut(s) | 1061 |
| BbvI | GCAGC | 6 cut(s) | 156, 670, 1234, 1315, 1351, 2134 |
| BccI | CCATC | 5 cut(s) | 367, 809, 1071, 1528, 2199 |
| BciT130I | CCWGG | 1 cut(s) | 783 |
| BcnI | CCSGG | 2 cut(s) | 141, 1902 |
| BcoDI | GTCTC | 1 cut(s) | 33 |
| BfaI | CTAG | 6 cut(s) | 1071, 1274, 1289, 1869, 1971, 2319 |
| BfmI | CTRYAG | 1 cut(s) | 878 |
| BfrI | CTTAAG | 2 cut(s) | 14, 1024 |
| BglII | AGATCT | 2 cut(s) | 676, 2179 |
| BisI | GCNGC | 7 cut(s) | 90, 145, 659, 1248, 1329, 1365, 2123 |
| BlpI | GCTNAGC | 1 cut(s) | 2118 |
| BlsI | GCNGC | 7 cut(s) | 91, 146, 660, 1249, 1330, 1366, 2124 |
| Bme1390I | CCNGG | 3 cut(s) | 141, 783, 1902 |
| Bme18I | GGWCC | 6 cut(s) | 208, 778, 1123, 1387, 1792, 2188 |
| BmeT110I | CYCGRG | 1 cut(s) | 2250 |
| BmgT120I | GGNCC | 9 cut(s) | 208, 778, 791, 1123, 1294, 1387, 1792, 2188, 2327 |
| BmiI | GGNNCC | 8 cut(s) | 93, 126, 192, 779, 780, 1793, 1794, 2189 |
| BmrFI | CCNGG | 3 cut(s) | 141, 783, 1902 |
| BmrI | ACTGGG | 3 cut(s) | 168, 1905, 2341 |
| BmsI | GCATC | 9 cut(s) | 76, 80, 367, 626, 699, 1999, 2130, 2278, 2488 |
| BmuI | ACTGGG | 3 cut(s) | 168, 1905, 2341 |
| BpiI | GAAGAC | 1 cut(s) | 344 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1523, 1555, 1720, 1752 |
| BpmI | CTGGAG | 1 cut(s) | 647 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2118 |
| BpuEI | CTTGAG | 5 cut(s) | 872, 1547, 1783, 1930, 2405 |
| BpuMI | CCSGG | 2 cut(s) | 141, 1902 |
| Bsa29I | ATCGAT | 1 cut(s) | 2206 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2013 |
| BsaHI | GRCGYC | 1 cut(s) | 2638 |
| BsaJI | CCNNGG | 3 cut(s) | 611, 781, 810 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1835, 1865 |
| Bse118I | RCCGGY | 1 cut(s) | 2406 |
| Bse1I | ACTGG | 9 cut(s) | 163, 506, 1516, 1911, 1981, 2284, 2315, 2329, 2347 |
| Bse21I | CCTNAGG | 1 cut(s) | 96 |
| Bse3DI | GCAATG | 2 cut(s) | 74, 1413 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2013 |
| BseBI | CCWGG | 1 cut(s) | 783 |
| BseCI | ATCGAT | 1 cut(s) | 2206 |
| BseDI | CCNNGG | 3 cut(s) | 611, 781, 810 |
| BseJI | GATNNNNATC | 1 cut(s) | 2013 |
| BseMI | GCAATG | 2 cut(s) | 74, 1413 |
| BseMII | CTCAG | 8 cut(s) | 87, 304, 509, 1461, 1751, 1901, 2109, 2451 |
| BseNI | ACTGG | 9 cut(s) | 163, 506, 1516, 1911, 1981, 2284, 2315, 2329, 2347 |
| BseRI | GAGGAG | 4 cut(s) | 1544, 1744, 1875, 2554 |
| BseSI | GKGCMC | 1 cut(s) | 127 |
| BseXI | GCAGC | 6 cut(s) | 156, 670, 1234, 1315, 1351, 2134 |
| BshFI | GGCC | 6 cut(s) | 252, 792, 1296, 1538, 2328, 2410 |
| BshNI | GGYRCC | 1 cut(s) | 124 |
| BshVI | ATCGAT | 1 cut(s) | 2206 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1061 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2250 |
| BsiSI | CCGG | 3 cut(s) | 141, 1901, 2407 |
| BslFI | GGGAC | 7 cut(s) | 123, 764, 929, 1805, 1872, 2201, 2625 |
| BsmAI | GTCTC | 1 cut(s) | 33 |
| BsmFI | GGGAC | 7 cut(s) | 123, 764, 929, 1805, 1872, 2201, 2625 |
| BsmI | GAATGC | 1 cut(s) | 741 |
| BsnI | GGCC | 6 cut(s) | 252, 792, 1296, 1538, 2328, 2410 |
| BsoBI | CYCGRG | 1 cut(s) | 2250 |
| Bsp1286I | GDGCHC | 3 cut(s) | 127, 155, 1061 |
| Bsp1407I | TGTACA | 1 cut(s) | 228 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2118 |
| Bsp19I | CCATGG | 1 cut(s) | 611 |
| BspACI | CCGC | 3 cut(s) | 89, 712, 1585 |
| BspANI | GGCC | 6 cut(s) | 252, 792, 1296, 1538, 2328, 2410 |
| BspCNI | CTCAG | 8 cut(s) | 88, 303, 510, 1462, 1750, 1900, 2110, 2450 |
| BspDI | ATCGAT | 1 cut(s) | 2206 |
| BspHI | TCATGA | 1 cut(s) | 688 |
| BspLI | GGNNCC | 8 cut(s) | 93, 126, 192, 779, 780, 1793, 1794, 2189 |
| BspMAI | CTGCAG | 1 cut(s) | 882 |
| BspPI | GGATC | 4 cut(s) | 512, 1388, 2211, 2357 |
| BspQI | GCTCTTC | 1 cut(s) | 429 |
| BspT107I | GGYRCC | 1 cut(s) | 124 |
| BspTI | CTTAAG | 2 cut(s) | 14, 1024 |
| BsrDI | GCAATG | 2 cut(s) | 74, 1413 |
| BsrFI | RCCGGY | 1 cut(s) | 2406 |
| BsrGI | TGTACA | 1 cut(s) | 228 |
| BsrI | ACTGG | 9 cut(s) | 163, 506, 1516, 1911, 1981, 2284, 2315, 2329, 2347 |
| BssAI | RCCGGY | 1 cut(s) | 2406 |
| BssECI | CCNNGG | 3 cut(s) | 611, 781, 810 |
| BssNAI | GTATAC | 1 cut(s) | 1509 |
| BssNI | GRCGYC | 1 cut(s) | 2638 |
| BssT1I | CCWWGG | 1 cut(s) | 611 |
| Bst1107I | GTATAC | 1 cut(s) | 1509 |
| Bst2UI | CCWGG | 1 cut(s) | 783 |
| Bst4CI | ACNGT | 4 cut(s) | 774, 799, 2214, 2373 |
| Bst6I | CTCTTC | 2 cut(s) | 429, 1025 |
| BstACI | GRCGYC | 1 cut(s) | 2638 |
| BstAFI | CTTAAG | 2 cut(s) | 14, 1024 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1852 |
| BstAUI | TGTACA | 1 cut(s) | 228 |
| BstC8I | GCNNGC | 3 cut(s) | 969, 1032, 2408 |
| BstDSI | CCRYGG | 1 cut(s) | 611 |
| BstEII | GGTNACC | 1 cut(s) | 1701 |
| BstMAI | GTCTC | 1 cut(s) | 33 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 150, 419, 709, 973, 1852, 2524 |
| BstNI | CCWGG | 1 cut(s) | 783 |
| BstNSI | RCATGY | 4 cut(s) | 889, 1034, 1166, 1877 |
| BstPI | GGTNACC | 1 cut(s) | 1701 |
| BstSCI | CCNGG | 3 cut(s) | 139, 781, 1900 |
| BstSFI | CTRYAG | 1 cut(s) | 878 |
| BstSLI | GKGCMC | 1 cut(s) | 127 |
| BstV1I | GCAGC | 6 cut(s) | 156, 670, 1234, 1315, 1351, 2134 |
| BstV2I | GAAGAC | 1 cut(s) | 344 |
| BstX2I | RGATCY | 3 cut(s) | 504, 676, 2179 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1304 |
| BstYI | RGATCY | 3 cut(s) | 504, 676, 2179 |
| BstZ17I | GTATAC | 1 cut(s) | 1509 |
| Bsu15I | ATCGAT | 1 cut(s) | 2206 |
| Bsu36I | CCTNAGG | 1 cut(s) | 96 |
| BsuRI | GGCC | 6 cut(s) | 252, 792, 1296, 1538, 2328, 2410 |
| BsuTUI | ATCGAT | 1 cut(s) | 2206 |
| BtgI | CCRYGG | 1 cut(s) | 611 |
| BtsI | GCAGTG | 1 cut(s) | 1059 |
| BtsIMutI | CAGTG | 3 cut(s) | 779, 1059, 2308 |
| Cac8I | GCNNGC | 3 cut(s) | 969, 1032, 2408 |
| CciI | TCATGA | 1 cut(s) | 688 |
| Cfr10I | RCCGGY | 1 cut(s) | 2406 |
| Cfr13I | GGNCC | 9 cut(s) | 208, 778, 791, 1123, 1294, 1387, 1792, 2188, 2327 |
| ClaI | ATCGAT | 1 cut(s) | 2206 |
| CseI | GACGC | 1 cut(s) | 818 |
| Csp6I | GTAC | 5 cut(s) | 229, 1160, 1715, 2261, 2337 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1569, 1604 |
| CviQI | GTAC | 5 cut(s) | 229, 1160, 1715, 2261, 2337 |
| DraI | TTTAAA | 2 cut(s) | 864, 1824 |
| Eam1104I | CTCTTC | 2 cut(s) | 429, 1025 |
| EarI | CTCTTC | 2 cut(s) | 429, 1025 |
| Eco130I | CCWWGG | 1 cut(s) | 611 |
| Eco147I | AGGCCT | 1 cut(s) | 252 |
| Eco24I | GRGCYC | 1 cut(s) | 155 |
| Eco47I | GGWCC | 6 cut(s) | 208, 778, 1123, 1387, 1792, 2188 |
| Eco57I | CTGAAG | 4 cut(s) | 438, 2249, 2397, 2657 |
| Eco81I | CCTNAGG | 1 cut(s) | 96 |
| Eco88I | CYCGRG | 1 cut(s) | 2250 |
| Eco91I | GGTNACC | 1 cut(s) | 1701 |
| EcoO109I | RGGNCCY | 2 cut(s) | 778, 1792 |
| EcoO65I | GGTNACC | 1 cut(s) | 1701 |
| EcoRI | GAATTC | 2 cut(s) | 1109, 1616 |
| EcoRII | CCWGG | 1 cut(s) | 781 |
| EcoT14I | CCWWGG | 1 cut(s) | 611 |
| EcoT22I | ATGCAT | 2 cut(s) | 382, 1879 |
| EcoT38I | GRGCYC | 1 cut(s) | 155 |
| ErhI | CCWWGG | 1 cut(s) | 611 |
| FaqI | GGGAC | 7 cut(s) | 123, 764, 929, 1805, 1872, 2201, 2625 |
| FauI | CCCGC | 1 cut(s) | 1578 |
| FauNDI | CATATG | 1 cut(s) | 308 |
| FblI | GTMKAC | 2 cut(s) | 1508, 2635 |
| Fnu4HI | GCNGC | 7 cut(s) | 90, 145, 659, 1248, 1329, 1365, 2123 |
| FriOI | GRGCYC | 1 cut(s) | 155 |
| Fsp4HI | GCNGC | 7 cut(s) | 90, 145, 659, 1248, 1329, 1365, 2123 |
| FspBI | CTAG | 6 cut(s) | 1071, 1274, 1289, 1869, 1971, 2319 |
| GluI | GCNGC | 7 cut(s) | 90, 145, 659, 1248, 1329, 1365, 2123 |
| GsuI | CTGGAG | 1 cut(s) | 647 |
| HaeIII | GGCC | 6 cut(s) | 252, 792, 1296, 1538, 2328, 2410 |
| HapII | CCGG | 3 cut(s) | 141, 1901, 2407 |
| HgaI | GACGC | 1 cut(s) | 818 |
| Hin1I | GRCGYC | 1 cut(s) | 2638 |
| HindIII | AAGCTT | 3 cut(s) | 1826, 2446, 2669 |
| HinfI | GANTC | 8 cut(s) | 56, 130, 552, 1143, 1280, 1493, 2023, 2305 |
| HpaII | CCGG | 3 cut(s) | 141, 1901, 2407 |
| HphI | GGTGA | 5 cut(s) | 65, 295, 560, 1695, 1890 |
| Hpy166II | GTNNAC | 5 cut(s) | 858, 1123, 1509, 2339, 2636 |
| Hpy8I | GTNNAC | 5 cut(s) | 858, 1123, 1509, 2339, 2636 |
| HpyCH4III | ACNGT | 4 cut(s) | 774, 799, 2214, 2373 |
| HpyCH4IV | ACGT | 1 cut(s) | 2638 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 150, 419, 709, 973, 1852, 2524 |
| HpySE526I | ACGT | 1 cut(s) | 2638 |
| Hsp92I | GRCGYC | 1 cut(s) | 2638 |
| KflI | GGGWCCC | 2 cut(s) | 778, 1792 |
| KroI | GCCGGC | 1 cut(s) | 2406 |
| KroNI | GCCGGC | 1 cut(s) | 2408 |
| LguI | GCTCTTC | 1 cut(s) | 429 |
| LmnI | GCTCC | 3 cut(s) | 97, 1843, 2165 |
| Lsp1109I | GCAGC | 6 cut(s) | 156, 670, 1234, 1315, 1351, 2134 |
| LweI | GCATC | 9 cut(s) | 76, 80, 367, 626, 699, 1999, 2130, 2278, 2488 |
| MaeI | CTAG | 6 cut(s) | 1071, 1274, 1289, 1869, 1971, 2319 |
| MaeII | ACGT | 1 cut(s) | 2638 |
| MaeIII | GTNAC | 7 cut(s) | 557, 583, 1521, 1701, 1896, 2078, 2306 |
| MfeI | CAATTG | 2 cut(s) | 195, 1623 |
| MflI | RGATCY | 3 cut(s) | 504, 676, 2179 |
| MhlI | GDGCHC | 3 cut(s) | 127, 155, 1061 |
| MlyI | GAGTC | 3 cut(s) | 139, 561, 2314 |
| MmeI | TCCRAC | 1 cut(s) | 454 |
| Mph1103I | ATGCAT | 2 cut(s) | 382, 1879 |
| MroNI | GCCGGC | 1 cut(s) | 2406 |
| MroXI | GAANNNNTTC | 2 cut(s) | 423, 1757 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1004, 2196, 2619 |
| MspCI | CTTAAG | 2 cut(s) | 14, 1024 |
| MspI | CCGG | 3 cut(s) | 141, 1901, 2407 |
| MspR9I | CCNGG | 3 cut(s) | 141, 783, 1902 |
| MunI | CAATTG | 2 cut(s) | 195, 1623 |
| Mva1269I | GAATGC | 1 cut(s) | 741 |
| MvaI | CCWGG | 1 cut(s) | 783 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 150, 419, 709, 973, 1852, 2524 |
| NaeI | GCCGGC | 1 cut(s) | 2408 |
| NciI | CCSGG | 2 cut(s) | 141, 1902 |
| NcoI | CCATGG | 1 cut(s) | 611 |
| NdeI | CATATG | 1 cut(s) | 308 |
| NgoMIV | GCCGGC | 1 cut(s) | 2406 |
| NlaIV | GGNNCC | 8 cut(s) | 93, 126, 192, 779, 780, 1793, 1794, 2189 |
| NmeAIII | GCCGAG | 1 cut(s) | 12 |
| NmuCI | GTSAC | 5 cut(s) | 557, 583, 1701, 1896, 2306 |
| NsiI | ATGCAT | 2 cut(s) | 382, 1879 |
| NspI | RCATGY | 4 cut(s) | 889, 1034, 1166, 1877 |
| PaeI | GCATGC | 1 cut(s) | 1034 |
| PagI | TCATGA | 1 cut(s) | 688 |
| PceI | AGGCCT | 1 cut(s) | 252 |
| PciSI | GCTCTTC | 1 cut(s) | 429 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2488 |
| PctI | GAATGC | 1 cut(s) | 741 |
| PdiI | GCCGGC | 1 cut(s) | 2408 |
| PdmI | GAANNNNTTC | 2 cut(s) | 423, 1757 |
| PfeI | GAWTC | 5 cut(s) | 56, 1143, 1280, 1493, 2023 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 501, 612, 788, 1449 |
| PkrI | GCNGC | 7 cut(s) | 91, 146, 660, 1249, 1330, 1366, 2124 |
| PleI | GAGTC | 3 cut(s) | 138, 560, 2313 |
| PpsI | GAGTC | 3 cut(s) | 138, 560, 2313 |
| PpuMI | RGGWCCY | 2 cut(s) | 778, 1792 |
| PsiI | TTATAA | 1 cut(s) | 1047 |
| Psp5II | RGGWCCY | 2 cut(s) | 778, 1792 |
| Psp6I | CCWGG | 1 cut(s) | 781 |
| PspEI | GGTNACC | 1 cut(s) | 1701 |
| PspGI | CCWGG | 1 cut(s) | 781 |
| PspN4I | GGNNCC | 8 cut(s) | 93, 126, 192, 779, 780, 1793, 1794, 2189 |
| PspPI | GGNCC | 9 cut(s) | 208, 778, 791, 1123, 1294, 1387, 1792, 2188, 2327 |
| PspPPI | RGGWCCY | 2 cut(s) | 778, 1792 |
| PstI | CTGCAG | 1 cut(s) | 882 |
| PsuI | RGATCY | 3 cut(s) | 504, 676, 2179 |
| RsaI | GTAC | 5 cut(s) | 230, 1161, 1716, 2262, 2338 |
| RsaNI | GTAC | 5 cut(s) | 229, 1160, 1715, 2261, 2337 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1004, 2196, 2619 |
| SapI | GCTCTTC | 1 cut(s) | 429 |
| SatI | GCNGC | 7 cut(s) | 90, 145, 659, 1248, 1329, 1365, 2123 |
| Sau96I | GGNCC | 9 cut(s) | 208, 778, 791, 1123, 1294, 1387, 1792, 2188, 2327 |
| SchI | GAGTC | 3 cut(s) | 139, 561, 2314 |
| ScrFI | CCNGG | 3 cut(s) | 141, 783, 1902 |
| SduI | GDGCHC | 3 cut(s) | 127, 155, 1061 |
| SfaNI | GCATC | 9 cut(s) | 76, 80, 367, 626, 699, 1999, 2130, 2278, 2488 |
| SfcI | CTRYAG | 1 cut(s) | 878 |
| SinI | GGWCC | 6 cut(s) | 208, 778, 1123, 1387, 1792, 2188 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1004, 2196, 2619 |
| SmlI | CTYRAG | 7 cut(s) | 14, 851, 1024, 1526, 1762, 1945, 2384 |
| SmoI | CTYRAG | 7 cut(s) | 14, 851, 1024, 1526, 1762, 1945, 2384 |
| SphI | GCATGC | 1 cut(s) | 1034 |
| SseBI | AGGCCT | 1 cut(s) | 252 |
| SsiI | CCGC | 3 cut(s) | 89, 712, 1585 |
| SspI | AATATT | 1 cut(s) | 1175 |
| SspMI | CTAG | 6 cut(s) | 1071, 1274, 1289, 1869, 1971, 2319 |
| StuI | AGGCCT | 1 cut(s) | 252 |
| StyD4I | CCNGG | 3 cut(s) | 139, 781, 1900 |
| StyI | CCWWGG | 1 cut(s) | 611 |
| TaaI | ACNGT | 4 cut(s) | 774, 799, 2214, 2373 |
| TaiI | ACGT | 1 cut(s) | 2641 |
| TaqI | TCGA | 3 cut(s) | 639, 2206, 2563 |
| TatI | WGTACW | 2 cut(s) | 228, 2260 |
| TauI | GCSGC | 1 cut(s) | 92 |
| TfiI | GAWTC | 5 cut(s) | 56, 1143, 1280, 1493, 2023 |
| TscAI | CASTG | 3 cut(s) | 779, 1066, 2315 |
| TseFI | GTSAC | 5 cut(s) | 557, 583, 1701, 1896, 2306 |
| TseI | GCWGC | 6 cut(s) | 144, 658, 1247, 1328, 1364, 2122 |
| Tsp45I | GTSAC | 5 cut(s) | 557, 583, 1701, 1896, 2306 |
| TspGWI | ACGGA | 3 cut(s) | 545, 602, 2497 |
| TspRI | CASTG | 3 cut(s) | 779, 1066, 2315 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 501, 612, 788, 1449 |
| Vha464I | CTTAAG | 2 cut(s) | 14, 1024 |
| VpaK11BI | GGWCC | 6 cut(s) | 208, 778, 1123, 1387, 1792, 2188 |
| XapI | RAATTY | 7 cut(s) | 898, 1084, 1109, 1217, 1616, 2431, 2603 |
| XbaI | TCTAGA | 1 cut(s) | 1070 |
| XceI | RCATGY | 4 cut(s) | 889, 1034, 1166, 1877 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 771 |
| XmiI | GTMKAC | 2 cut(s) | 1508, 2635 |
| XmnI | GAANNNNTTC | 2 cut(s) | 423, 1757 |
| XspI | CTAG | 6 cut(s) | 1071, 1274, 1289, 1869, 1971, 2319 |
| ZraI | GACGTC | 1 cut(s) | 2639 |
| Zsp2I | ATGCAT | 2 cut(s) | 382, 1879 |