Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G26730 |
| malus_domestica | MD09G1122000.v1.1 |
| prunus_persica | Prupe.3G201600_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0156681 |
| rosa_laevigata | RLG00000020931 |
| rosa_multiflora | Rmu_sc0001130.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00092840 |
| rosa_samantha | Rh2BG534200 Rh2DG543000 |
| rosa_wichuraiana | Rw2G042990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 3 cut(s) | 175, 251, 439 |
| AcuI | CTGAAG | 5 cut(s) | 158, 219, 244, 422, 483 |
| AgsI | TTSAA | 1 cut(s) | 270 |
| AluBI | AGCT | 2 cut(s) | 224, 488 |
| AluI | AGCT | 2 cut(s) | 224, 488 |
| Ama87I | CYCGRG | 2 cut(s) | 161, 425 |
| ApoI | RAATTY | 3 cut(s) | 175, 251, 439 |
| AvaI | CYCGRG | 2 cut(s) | 161, 425 |
| BbvCI | CCTCAGC | 2 cut(s) | 170, 434 |
| BccI | CCATC | 4 cut(s) | 236, 249, 500, 513 |
| BfmI | CTRYAG | 2 cut(s) | 80, 344 |
| BmeT110I | CYCGRG | 2 cut(s) | 161, 425 |
| BmsI | GCATC | 2 cut(s) | 165, 429 |
| Bpu10I | CCTNAGC | 2 cut(s) | 170, 434 |
| BsaJI | CCNNGG | 6 cut(s) | 90, 118, 160, 354, 382, 424 |
| BseDI | CCNNGG | 6 cut(s) | 90, 118, 160, 354, 382, 424 |
| BseGI | GGATG | 2 cut(s) | 156, 420 |
| BseMII | CTCAG | 2 cut(s) | 161, 425 |
| BseRI | GAGGAG | 2 cut(s) | 122, 386 |
| BsiHKCI | CYCGRG | 2 cut(s) | 161, 425 |
| BsoBI | CYCGRG | 2 cut(s) | 161, 425 |
| Bsp143I | GATC | 2 cut(s) | 141, 405 |
| Bsp19I | CCATGG | 2 cut(s) | 90, 354 |
| BspCNI | CTCAG | 2 cut(s) | 162, 426 |
| BspMAI | CTGCAG | 2 cut(s) | 84, 348 |
| BssECI | CCNNGG | 6 cut(s) | 90, 118, 160, 354, 382, 424 |
| BssMI | GATC | 2 cut(s) | 141, 405 |
| BssT1I | CCWWGG | 2 cut(s) | 90, 354 |
| Bst4CI | ACNGT | 2 cut(s) | 122, 386 |
| BstC8I | GCNNGC | 2 cut(s) | 54, 318 |
| BstDEI | CTNAG | 4 cut(s) | 48, 170, 312, 434 |
| BstDSI | CCRYGG | 4 cut(s) | 90, 118, 354, 382 |
| BstF5I | GGATG | 2 cut(s) | 156, 420 |
| BstKTI | GATC | 2 cut(s) | 144, 408 |
| BstMBI | GATC | 2 cut(s) | 141, 405 |
| BstSFI | CTRYAG | 2 cut(s) | 80, 344 |
| BtgI | CCRYGG | 4 cut(s) | 90, 118, 354, 382 |
| BtsCI | GGATG | 2 cut(s) | 156, 420 |
| Cac8I | GCNNGC | 2 cut(s) | 54, 318 |
| CviAII | CATG | 6 cut(s) | 91, 100, 196, 355, 364, 460 |
| CviJI | RGCY | 9 cut(s) | 5, 52, 89, 95, 224, 316, 353, 359, 488 |
| CviKI_1 | RGCY | 9 cut(s) | 5, 52, 89, 95, 224, 316, 353, 359, 488 |
| DdeI | CTNAG | 4 cut(s) | 48, 170, 312, 434 |
| DpnI | GATC | 2 cut(s) | 143, 407 |
| DpnII | GATC | 2 cut(s) | 141, 405 |
| Eco130I | CCWWGG | 2 cut(s) | 90, 354 |
| Eco57I | CTGAAG | 5 cut(s) | 158, 219, 244, 422, 483 |
| Eco88I | CYCGRG | 2 cut(s) | 161, 425 |
| EcoRI | GAATTC | 3 cut(s) | 175, 251, 439 |
| EcoT14I | CCWWGG | 2 cut(s) | 90, 354 |
| ErhI | CCWWGG | 2 cut(s) | 90, 354 |
| FaeI | CATG | 6 cut(s) | 94, 103, 199, 358, 367, 463 |
| FaiI | YATR | 9 cut(s) | 92, 101, 185, 197, 356, 365, 449, 461, 514 |
| FatI | CATG | 6 cut(s) | 90, 99, 195, 354, 363, 459 |
| FokI | GGATG | 2 cut(s) | 143, 407 |
| Hin1II | CATG | 6 cut(s) | 94, 103, 199, 358, 367, 463 |
| HinfI | GANTC | 2 cut(s) | 44, 308 |
| Hpy166II | GTNNAC | 2 cut(s) | 148, 412 |
| Hpy188I | TCNGA | 6 cut(s) | 41, 220, 238, 305, 484, 502 |
| Hpy188III | TCNNGA | 2 cut(s) | 136, 400 |
| Hpy8I | GTNNAC | 2 cut(s) | 148, 412 |
| HpyCH4III | ACNGT | 2 cut(s) | 122, 386 |
| HpyCH4V | TGCA | 6 cut(s) | 35, 56, 82, 299, 320, 346 |
| HpyF3I | CTNAG | 4 cut(s) | 48, 170, 312, 434 |
| Hsp92II | CATG | 6 cut(s) | 94, 103, 199, 358, 367, 463 |
| Kzo9I | GATC | 2 cut(s) | 141, 405 |
| LpnPI | CCDG | 7 cut(s) | 66, 149, 165, 261, 330, 413, 429 |
| LweI | GCATC | 2 cut(s) | 165, 429 |
| MalI | GATC | 2 cut(s) | 143, 407 |
| MboI | GATC | 2 cut(s) | 141, 405 |
| MboII | GAAGA | 5 cut(s) | 151, 184, 250, 415, 448 |
| MluCI | AATT | 5 cut(s) | 175, 212, 251, 439, 476 |
| MmeI | TCCRAC | 2 cut(s) | 19, 283 |
| MnlI | CCTC | 8 cut(s) | 143, 165, 170, 202, 407, 429, 434, 466 |
| NcoI | CCATGG | 2 cut(s) | 90, 354 |
| NdeII | GATC | 2 cut(s) | 141, 405 |
| NlaIII | CATG | 6 cut(s) | 94, 103, 199, 358, 367, 463 |
| PfeI | GAWTC | 2 cut(s) | 44, 308 |
| PstI | CTGCAG | 2 cut(s) | 84, 348 |
| Sau3AI | GATC | 2 cut(s) | 141, 405 |
| SetI | ASST | 2 cut(s) | 226, 490 |
| SfaNI | GCATC | 2 cut(s) | 165, 429 |
| SfcI | CTRYAG | 2 cut(s) | 80, 344 |
| Sse9I | AATT | 5 cut(s) | 175, 212, 251, 439, 476 |
| StyI | CCWWGG | 2 cut(s) | 90, 354 |
| TaaI | ACNGT | 2 cut(s) | 122, 386 |
| TasI | AATT | 5 cut(s) | 175, 212, 251, 439, 476 |
| TfiI | GAWTC | 2 cut(s) | 44, 308 |
| TspDTI | ATGAA | 3 cut(s) | 184, 244, 448 |
| XapI | RAATTY | 3 cut(s) | 175, 251, 439 |