auxin-induced protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g36840 |
| malus_domestica | MD09G1166400.v1.1 |
| prunus_persica | Prupe.3G024100_v2.0.a1 |
| pyrus_communis | pycom09g08390 |
| rosa_chinensis | RchiOBHm_Chr2g0149231 |
| rosa_laevigata | RLG00000020385 |
| rosa_multiflora | Rmu_sc0001615.1_g000006 |
| rosa_roxburghii | Rroxscaffold_2G00098290 |
| rosa_rugosa | Rorug02G0410000 |
| rosa_samantha | Rh2AG470500 Rh2BG482700 Rh2CG456400 Rh2DG491800 |
| rosa_wichuraiana | Rw2G038260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 398 |
| Acc65I | GGTACC | 1 cut(s) | 144 |
| AccB1I | GGYRCC | 1 cut(s) | 144 |
| AcsI | RAATTY | 2 cut(s) | 224, 354 |
| AcuI | CTGAAG | 2 cut(s) | 284, 368 |
| AfaI | GTAC | 3 cut(s) | 146, 320, 370 |
| AgsI | TTSAA | 2 cut(s) | 235, 280 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 215, 247 |
| AluBI | AGCT | 2 cut(s) | 70, 334 |
| AluI | AGCT | 2 cut(s) | 70, 334 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 346 |
| AoxI | GGCC | 1 cut(s) | 78 |
| ApoI | RAATTY | 2 cut(s) | 224, 354 |
| Asp718I | GGTACC | 1 cut(s) | 144 |
| AsuHPI | GGTGA | 1 cut(s) | 376 |
| BanI | GGYRCC | 1 cut(s) | 144 |
| BccI | CCATC | 5 cut(s) | 53, 135, 398, 425, 452 |
| BclI | TGATCA | 1 cut(s) | 337 |
| BfuAI | ACCTGC | 1 cut(s) | 398 |
| BmcAI | AGTACT | 1 cut(s) | 370 |
| BmiI | GGNNCC | 1 cut(s) | 146 |
| BpmI | CTGGAG | 1 cut(s) | 237 |
| BsaWI | WCCGGW | 1 cut(s) | 153 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 237, 267 |
| Bse3DI | GCAATG | 1 cut(s) | 415 |
| BseGI | GGATG | 2 cut(s) | 45, 146 |
| BseMI | GCAATG | 1 cut(s) | 415 |
| BseMII | CTCAG | 2 cut(s) | 351, 437 |
| BshFI | GGCC | 1 cut(s) | 80 |
| BshNI | GGYRCC | 1 cut(s) | 144 |
| BsiSI | CCGG | 2 cut(s) | 37, 154 |
| BsnI | GGCC | 1 cut(s) | 80 |
| Bsp143I | GATC | 2 cut(s) | 237, 337 |
| BspANI | GGCC | 1 cut(s) | 80 |
| BspCNI | CTCAG | 2 cut(s) | 352, 438 |
| BspLI | GGNNCC | 1 cut(s) | 146 |
| BspMI | ACCTGC | 1 cut(s) | 398 |
| BspQI | GCTCTTC | 1 cut(s) | 207 |
| BspT107I | GGYRCC | 1 cut(s) | 144 |
| BsrDI | GCAATG | 1 cut(s) | 415 |
| BssMI | GATC | 2 cut(s) | 237, 337 |
| Bst4CI | ACNGT | 1 cut(s) | 323 |
| Bst6I | CTCTTC | 2 cut(s) | 207, 308 |
| BstC8I | GCNNGC | 1 cut(s) | 42 |
| BstDEI | CTNAG | 4 cut(s) | 328, 360, 437, 446 |
| BstF5I | GGATG | 2 cut(s) | 45, 146 |
| BstKTI | GATC | 2 cut(s) | 240, 340 |
| BstMBI | GATC | 2 cut(s) | 237, 337 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 93 |
| BsuRI | GGCC | 1 cut(s) | 80 |
| BtsCI | GGATG | 2 cut(s) | 45, 146 |
| BtsIMutI | CAGTG | 1 cut(s) | 247 |
| BveI | ACCTGC | 1 cut(s) | 398 |
| Cac8I | GCNNGC | 1 cut(s) | 42 |
| CaiI | CAGNNNCTG | 1 cut(s) | 346 |
| CseI | GACGC | 1 cut(s) | 76 |
| Csp6I | GTAC | 3 cut(s) | 145, 319, 369 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 223, 258 |
| CviAII | CATG | 1 cut(s) | 261 |
| CviJI | RGCY | 7 cut(s) | 44, 70, 80, 200, 327, 334, 478 |
| CviKI_1 | RGCY | 7 cut(s) | 44, 70, 80, 200, 327, 334, 478 |
| CviQI | GTAC | 3 cut(s) | 145, 319, 369 |
| DdeI | CTNAG | 4 cut(s) | 328, 360, 437, 446 |
| DpnI | GATC | 2 cut(s) | 239, 339 |
| DpnII | GATC | 2 cut(s) | 237, 337 |
| Eam1104I | CTCTTC | 2 cut(s) | 207, 308 |
| EarI | CTCTTC | 2 cut(s) | 207, 308 |
| Eco57I | CTGAAG | 2 cut(s) | 284, 368 |
| FaeI | CATG | 1 cut(s) | 264 |
| FaiI | YATR | 5 cut(s) | 83, 135, 262, 417, 470 |
| FatI | CATG | 1 cut(s) | 260 |
| FbaI | TGATCA | 1 cut(s) | 337 |
| FokI | GGATG | 2 cut(s) | 32, 153 |
| GsuI | CTGGAG | 1 cut(s) | 237 |
| HaeIII | GGCC | 1 cut(s) | 80 |
| HapII | CCGG | 2 cut(s) | 37, 154 |
| HgaI | GACGC | 1 cut(s) | 76 |
| Hin1II | CATG | 1 cut(s) | 264 |
| HinfI | GANTC | 3 cut(s) | 150, 163, 174 |
| HpaII | CCGG | 2 cut(s) | 37, 154 |
| HphI | GGTGA | 1 cut(s) | 376 |
| Hpy188I | TCNGA | 3 cut(s) | 189, 303, 361 |
| Hpy188III | TCNNGA | 7 cut(s) | 73, 117, 160, 206, 216, 235, 346 |
| HpyAV | CCTTC | 2 cut(s) | 70, 391 |
| HpyCH4III | ACNGT | 1 cut(s) | 323 |
| HpyCH4V | TGCA | 1 cut(s) | 393 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 93 |
| HpyF3I | CTNAG | 4 cut(s) | 328, 360, 437, 446 |
| Hsp92II | CATG | 1 cut(s) | 264 |
| KpnI | GGTACC | 1 cut(s) | 148 |
| Ksp22I | TGATCA | 1 cut(s) | 337 |
| Kzo9I | GATC | 2 cut(s) | 237, 337 |
| LguI | GCTCTTC | 1 cut(s) | 207 |
| LpnPI | CCDG | 8 cut(s) | 50, 58, 102, 141, 167, 201, 359, 403 |
| MalI | GATC | 2 cut(s) | 239, 339 |
| MboI | GATC | 2 cut(s) | 237, 337 |
| MboII | GAAGA | 7 cut(s) | 116, 194, 268, 316, 325, 361, 413 |
| MluCI | AATT | 4 cut(s) | 224, 292, 354, 422 |
| MmeI | TCCRAC | 3 cut(s) | 73, 118, 126 |
| MnlI | CCTC | 6 cut(s) | 124, 188, 214, 239, 309, 355 |
| MspI | CCGG | 2 cut(s) | 37, 154 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 93 |
| NdeII | GATC | 2 cut(s) | 237, 337 |
| NlaIII | CATG | 1 cut(s) | 264 |
| NlaIV | GGNNCC | 1 cut(s) | 146 |
| PciSI | GCTCTTC | 1 cut(s) | 207 |
| PfeI | GAWTC | 3 cut(s) | 150, 163, 174 |
| PspN4I | GGNNCC | 1 cut(s) | 146 |
| PstNI | CAGNNNCTG | 1 cut(s) | 346 |
| RsaI | GTAC | 3 cut(s) | 146, 320, 370 |
| RsaNI | GTAC | 3 cut(s) | 145, 319, 369 |
| SapI | GCTCTTC | 1 cut(s) | 207 |
| Sau3AI | GATC | 2 cut(s) | 237, 337 |
| ScaI | AGTACT | 1 cut(s) | 370 |
| SetI | ASST | 6 cut(s) | 72, 320, 336, 366, 392, 455 |
| Sse9I | AATT | 4 cut(s) | 224, 292, 354, 422 |
| TaaI | ACNGT | 1 cut(s) | 323 |
| TasI | AATT | 4 cut(s) | 224, 292, 354, 422 |
| TatI | WGTACW | 1 cut(s) | 368 |
| TfiI | GAWTC | 3 cut(s) | 150, 163, 174 |
| TscAI | CASTG | 1 cut(s) | 247 |
| TspDTI | ATGAA | 1 cut(s) | 80 |
| TspRI | CASTG | 1 cut(s) | 247 |
| XapI | RAATTY | 2 cut(s) | 224, 354 |
| ZrmI | AGTACT | 1 cut(s) | 370 |