Histone H2A
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0110991 RchiOBHm_Chr3g0463731 |
| rosa_multiflora | Rmu_sc0002106.1_g000011 |
| rosa_roxburghii | Rroxscaffold_3G00255050 |
| rosa_samantha | Rh2CG225700 Rh6CG174200 Rh7BG157000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 94 |
| AciI | CCGC | 2 cut(s) | 68, 121 |
| AcoI | YGGCCR | 1 cut(s) | 118 |
| AcuI | CTGAAG | 1 cut(s) | 42 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 39 |
| AgsI | TTSAA | 2 cut(s) | 310, 320 |
| AluBI | AGCT | 3 cut(s) | 20, 159, 197 |
| AluI | AGCT | 3 cut(s) | 20, 159, 197 |
| Alw21I | GWGCWC | 1 cut(s) | 169 |
| Ama87I | CYCGRG | 1 cut(s) | 198 |
| AoxI | GGCC | 1 cut(s) | 118 |
| ApeKI | GCWGC | 1 cut(s) | 194 |
| AspLEI | GCGC | 1 cut(s) | 306 |
| AsuHPI | GGTGA | 1 cut(s) | 82 |
| AvaI | CYCGRG | 1 cut(s) | 198 |
| Bbv12I | GWGCWC | 1 cut(s) | 169 |
| BbvI | GCAGC | 1 cut(s) | 206 |
| BclI | TGATCA | 1 cut(s) | 339 |
| BfmI | CTRYAG | 1 cut(s) | 109 |
| BisI | GCNGC | 2 cut(s) | 121, 195 |
| BlpI | GCTNAGC | 1 cut(s) | 147 |
| BlsI | GCNGC | 2 cut(s) | 122, 196 |
| BmeT110I | CYCGRG | 1 cut(s) | 198 |
| BmsI | GCATC | 1 cut(s) | 241 |
| BpmI | CTGGAG | 1 cut(s) | 197 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 147 |
| BsaJI | CCNNGG | 1 cut(s) | 227 |
| BsaWI | WCCGGW | 3 cut(s) | 103, 161, 169 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 9, 39 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 39 |
| Bse118I | RCCGGY | 1 cut(s) | 89 |
| BseDI | CCNNGG | 1 cut(s) | 227 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 39 |
| BseMII | CTCAG | 2 cut(s) | 161, 324 |
| BseXI | GCAGC | 1 cut(s) | 206 |
| BseYI | CCCAGC | 1 cut(s) | 277 |
| BshFI | GGCC | 1 cut(s) | 120 |
| BsiHKAI | GWGCWC | 1 cut(s) | 169 |
| BsiHKCI | CYCGRG | 1 cut(s) | 198 |
| BsiSI | CCGG | 4 cut(s) | 90, 104, 162, 170 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 39 |
| BsnI | GGCC | 1 cut(s) | 120 |
| BsoBI | CYCGRG | 1 cut(s) | 198 |
| Bsp1286I | GDGCHC | 1 cut(s) | 169 |
| Bsp143I | GATC | 1 cut(s) | 339 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 147 |
| BspACI | CCGC | 2 cut(s) | 68, 121 |
| BspANI | GGCC | 1 cut(s) | 120 |
| BspCNI | CTCAG | 2 cut(s) | 160, 325 |
| BsrFI | RCCGGY | 1 cut(s) | 89 |
| BssAI | RCCGGY | 1 cut(s) | 89 |
| BssECI | CCNNGG | 1 cut(s) | 227 |
| BssMI | GATC | 1 cut(s) | 339 |
| BssT1I | CCWWGG | 1 cut(s) | 227 |
| BstC8I | GCNNGC | 1 cut(s) | 30 |
| BstDEI | CTNAG | 2 cut(s) | 147, 333 |
| BstHHI | GCGC | 1 cut(s) | 306 |
| BstKTI | GATC | 1 cut(s) | 342 |
| BstMBI | GATC | 1 cut(s) | 339 |
| BstSFI | CTRYAG | 1 cut(s) | 109 |
| BstV1I | GCAGC | 1 cut(s) | 206 |
| BsuRI | GGCC | 1 cut(s) | 120 |
| Cac8I | GCNNGC | 1 cut(s) | 30 |
| CfoI | GCGC | 1 cut(s) | 306 |
| Cfr10I | RCCGGY | 1 cut(s) | 89 |
| CseI | GACGC | 1 cut(s) | 348 |
| CviAII | CATG | 2 cut(s) | 217, 295 |
| DdeI | CTNAG | 2 cut(s) | 147, 333 |
| DpnI | GATC | 1 cut(s) | 341 |
| DpnII | GATC | 1 cut(s) | 339 |
| EaeI | YGGCCR | 1 cut(s) | 118 |
| Eco130I | CCWWGG | 1 cut(s) | 227 |
| Eco57I | CTGAAG | 1 cut(s) | 42 |
| Eco88I | CYCGRG | 1 cut(s) | 198 |
| EcoT14I | CCWWGG | 1 cut(s) | 227 |
| ErhI | CCWWGG | 1 cut(s) | 227 |
| FaeI | CATG | 2 cut(s) | 220, 298 |
| FaiI | YATR | 4 cut(s) | 144, 218, 296, 373 |
| FatI | CATG | 2 cut(s) | 216, 294 |
| FbaI | TGATCA | 1 cut(s) | 339 |
| FblI | GTMKAC | 1 cut(s) | 94 |
| Fnu4HI | GCNGC | 2 cut(s) | 121, 195 |
| Fsp4HI | GCNGC | 2 cut(s) | 121, 195 |
| GlaI | GCGC | 1 cut(s) | 305 |
| GluI | GCNGC | 2 cut(s) | 121, 195 |
| GsaI | CCCAGC | 1 cut(s) | 281 |
| GsuI | CTGGAG | 1 cut(s) | 197 |
| HaeIII | GGCC | 1 cut(s) | 120 |
| HapII | CCGG | 4 cut(s) | 90, 104, 162, 170 |
| HgaI | GACGC | 1 cut(s) | 348 |
| HhaI | GCGC | 1 cut(s) | 306 |
| Hin1II | CATG | 2 cut(s) | 220, 298 |
| Hin6I | GCGC | 1 cut(s) | 304 |
| HinP1I | GCGC | 1 cut(s) | 304 |
| HinfI | GANTC | 1 cut(s) | 73 |
| HpaII | CCGG | 4 cut(s) | 90, 104, 162, 170 |
| HphI | GGTGA | 1 cut(s) | 82 |
| Hpy166II | GTNNAC | 1 cut(s) | 95 |
| Hpy188I | TCNGA | 1 cut(s) | 334 |
| Hpy188III | TCNNGA | 2 cut(s) | 11, 186 |
| Hpy8I | GTNNAC | 1 cut(s) | 95 |
| HpyAV | CCTTC | 6 cut(s) | 33, 37, 58, 127, 132, 254 |
| HpyCH4V | TGCA | 2 cut(s) | 28, 194 |
| HpyF3I | CTNAG | 2 cut(s) | 147, 333 |
| Hsp92II | CATG | 2 cut(s) | 220, 298 |
| HspAI | GCGC | 1 cut(s) | 304 |
| Ksp22I | TGATCA | 1 cut(s) | 339 |
| Kzo9I | GATC | 1 cut(s) | 339 |
| LmnI | GCTCC | 3 cut(s) | 17, 164, 172 |
| Lsp1109I | GCAGC | 1 cut(s) | 206 |
| LweI | GCATC | 1 cut(s) | 241 |
| MaeIII | GTNAC | 2 cut(s) | 282, 344 |
| MalI | GATC | 1 cut(s) | 341 |
| MboI | GATC | 1 cut(s) | 339 |
| MboII | GAAGA | 2 cut(s) | 73, 223 |
| MhlI | GDGCHC | 1 cut(s) | 169 |
| MluCI | AATT | 1 cut(s) | 98 |
| MnlI | CCTC | 3 cut(s) | 7, 29, 243 |
| MseI | TTAA | 1 cut(s) | 128 |
| MspI | CCGG | 4 cut(s) | 90, 104, 162, 170 |
| NdeII | GATC | 1 cut(s) | 339 |
| NlaIII | CATG | 2 cut(s) | 220, 298 |
| NmuCI | GTSAC | 1 cut(s) | 344 |
| PfeI | GAWTC | 1 cut(s) | 73 |
| PkrI | GCNGC | 2 cut(s) | 122, 196 |
| PspFI | CCCAGC | 1 cut(s) | 277 |
| SaqAI | TTAA | 1 cut(s) | 128 |
| SatI | GCNGC | 2 cut(s) | 121, 195 |
| Sau3AI | GATC | 1 cut(s) | 339 |
| SduI | GDGCHC | 1 cut(s) | 169 |
| SetI | ASST | 5 cut(s) | 22, 143, 161, 199, 318 |
| SfaNI | GCATC | 1 cut(s) | 241 |
| SfcI | CTRYAG | 1 cut(s) | 109 |
| Sse9I | AATT | 1 cut(s) | 98 |
| SsiI | CCGC | 2 cut(s) | 68, 121 |
| StyI | CCWWGG | 1 cut(s) | 227 |
| TasI | AATT | 1 cut(s) | 98 |
| TauI | GCSGC | 1 cut(s) | 123 |
| TfiI | GAWTC | 1 cut(s) | 73 |
| Tru1I | TTAA | 1 cut(s) | 128 |
| Tru9I | TTAA | 1 cut(s) | 128 |
| TseFI | GTSAC | 1 cut(s) | 344 |
| TseI | GCWGC | 1 cut(s) | 194 |
| Tsp45I | GTSAC | 1 cut(s) | 344 |
| TspGWI | ACGGA | 1 cut(s) | 70 |
| XmiI | GTMKAC | 1 cut(s) | 94 |