Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002250.1

Orthogroup ID

OG0004924

Physical Location & Seq

Genomic Coordinates Forward (+)

3242 .. 13355

Gene Structure 10114 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002250.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3177 bp

ctgacgaaacataatgatgatctttgttctgtcttaaacactttgcaccaagaacttctcccttactcttcctcaagctcaagctcaggcccagattttccttcagcacactatcacatggctcggtctgcactggatgaggtctcacaatctggtgcatttgtgagaagtgcttctgaattccgtaacttcatttcacgagatccgaactcgcaatttccagcagaagctgggagatatcatctgtatatatcatatgcttgcccttgggcgtcaaggtgcctggcatacttgaatattaaaggacttcagaaagctatcagctttacgtcagtcaaacctatatgggaaagaacaaaagaaagtgatgagcatatgggatgggtttttcctgcttcagataaggagctagaaggagctgaacctgaccctttgaatggagcaaaaagtgtacgagaactttatgagattgctagtacaaaatacactggaaagtacactgttccggttctatgggataaaaagcttggaacaattgtcagtaatgagagttcggagattattcgcatgtttaatactgaattcaacagcatagcagagaacccggctttggacttgtatcccgatcacttgcaatcccaagtcaatcagactaatgaatggatatacgacaagataaataacggtgtctataaatgtgggtttgccaagaagcaggagccttatgatgaggctgtgaaacagttgtatgaagctttggacagatgtgaggagatacttagcaagcaacgatacctctgtggaaacatattatctgaagctgatattcgtttgttcgtgactctcataagatttgatgaggtttatgcagtccacttcaagtgcaacaagagactcctgcgagagtacccaaatctgtttaactacaccaaggacattttccaagttcctggaatgagcaccacagtccaggtggatcacatcaaacgacactactatggaagccatccttctatcaatcccttcgggataaccggtgccgctgctgccgcagaggctccgaacggcttcggcctcgtccgggcacgccaccgacaccaagcactcggcaagtccgcggttcaggtgccggcaacccgattcccgcgcccgacccgccgggatccgacggtgacaatccaccagcgcgcggtgcagccgatcgcactccacgaatcccctggttccgccgggggccggagtttcgactcggactggaatatgatgcgcgcagaggttgtgccacgtcaccgctttgaaaatggcattgctttgagccctccatcacagctccaccattgctgttcagtagagagctacaatatggacagatccagattagatttaagatgttatcattctggatcaatacagtctgaggagtctgctctagacttggaaaggaactactgctgtcatcctaatctcccttcttcaagtccatctcctctccagccatttgcatctagtggtcagcactctgagagcaatgctgcctacttctcatggcctactttgacccggattaatgatgcagcagaagatagggcaaactattttggaaaccttcagaagggtgttcttcctgaaattttggggcggttgccatcaggacagcaggctacaaccttgcttgagctgatgaccatcagggcattccatagcaagatattgcgtcgctttagtcttggcactgccattgggtttcggattcgaaatggtgtcttgacagaaattccagctattcttgtctttgttgcccgtaaagctcacaggcattggctcagccattcacagtgtctacctgctgctcttgaggggccaggaggtgtatggtgtgatgtggatgtagtggaattttcctattttggttctccagctccaactcctaaggagcagctttacacagagcttgcagatggcttgaggggaaatgatccatatgtcggttctggttcccaggttgcaagccaggagacatatggaactatgggtgctattgttaaaagtcgaacaggaaatagacaagttggtttcctcacaaataggcatgtggcagttgatttggactatccaagccagaaaatgttccatcctatgccaccaagccttggacctggagtgtatcttggtgctgtagagagggcaacatcttttatcacagatgacctttggtatggaatatttgccggaacaaacccagaaacatttgtgcgagctgacggtgccttcattccttttgctgacgatttcaacatgaagaatgtaattacaactgtaccaggtgtgggtgagattggtgatgttaacatcatagacttgcagtctccaatcaacagtctcattggtaggcaagtgataaaagttgggagaagttcaggcttgactactgggaccatcatggcatatgccctcgagtacaatgatgaaaaagggatttgtttcttcactgatttttttgttgttggagagaatcagcagacttttgatcttgaaggtgatagtggaagcctcattctattaactggtcagaatggggagaagccacgacctgttggaatcatttggggtgggacagctaaccgtggtcgcttaaaactgaaaaaaggccaaccacctgaaaattggactagtggagttgatcttgggcgccttcttgacctcctggaactggatccgataacaaccgaagaagggcttcaagctgcaattgaagagcaacgaaatgcttcagcagctgggattggttccacagttgcagagtcatcccctgctgtctgtgctccatataaacataagctacaagataactgtggacctcttggtataaacttccgtcaagtaccatttgaaggcgaatcctatctgggaccaagtcgacgattgatgcatggtgattttcacattgaaaatggttttgaaacagctcccagtgttgagcaccagttcattccgagtttcaccagtagatctccggtaattcatagcaatcaagaggaaaatccagtatcaaaaaatgttttagcattgcggagtggttcagatgaagagatttctgtttccttacagttaggagagcctgaaccaaagagaagaaaaaactacaactctttctttagcactaaaggacccaaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1058

Amino Acids

117.3

Weight (kDa)

6.18

Isoelectric Point (pI)

51.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004924)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35155 AT2G35155 AT5G45030 AT5G45030
fragaria_vesca	FvH4_3g12240 FvH4_3g12240 FvH4_3g12240 FvH4_3g12240 FvH4_3g12240 FvH4_3g12240
malus_domestica	MD05G1252600.v1.1 MD10G1233600.v1.1
prunus_persica	Prupe.4G111500_v2.0.a1 Prupe.4G111500_v2.0.a1 Prupe.4G111500_v2.0.a1 Prupe.4G111500_v2.0.a1
pyrus_communis	pycom10g19590
rosa_chinensis	RchiOBHm_Chr5g0020051
rosa_laevigata	RLG00000032494 RLG00000032496
rosa_multiflora	Rmu_sc0002250.1_g000001 Rmu_sc0009586.1_g000004
rosa_roxburghii	Rroxscaffold_1G00058150
rosa_rugosa	Rorug05G0056400 Rorug05G0056500
rosa_samantha	Rh5AG146600 Rh5BG146100 Rh5CG157600 Rh5DG145500
rosa_wichuraiana	Rw5G012940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1852
AccB1I	GGYRCC	5 cut(s)	279, 1037, 1126, 2264, 2688
AccB7I	CCANNNNNTGG	1 cut(s)	2150
AccI	GTMKAC	2 cut(s)	1840, 2917
AccII	CGCG	5 cut(s)	1118, 1147, 1188, 1190, 1269
AclWI	GGATC	9 cut(s)	197, 984, 1157, 1170, 1365, 1411, 1970, 2708, 2721
AcsI	RAATTY	5 cut(s)	179, 581, 1629, 1773, 1895
AcuI	CTGAAG	6 cut(s)	87, 293, 381, 837, 1592, 2754
AcyI	GRCGYC	2 cut(s)	272, 2689
AfaI	GTAC	7 cut(s)	453, 478, 497, 908, 2319, 2459, 2883
AgeI	ACCGGT	1 cut(s)	1034
AhdI	GACNNNNNGTC	1 cut(s)	2362
AhlI	ACTAGT	1 cut(s)	2669
AjiI	CACGTC	1 cut(s)	1286
AjuI	GAANNNNNNNTTGG	4 cut(s)	593, 625, 923, 955
Alw21I	GWGCWC	3 cut(s)	962, 2824, 2982
Alw26I	GTCTC	5 cut(s)	148, 886, 2009, 2370, 2384
AlwI	GGATC	9 cut(s)	197, 984, 1157, 1170, 1365, 1411, 1970, 2708, 2721
AlwNI	CAGNNNCTG	2 cut(s)	230, 2777
Ama87I	CYCGRG	1 cut(s)	2453
AoxI	GGCC	6 cut(s)	88, 1072, 1234, 1547, 1859, 2647
ApeKI	GCWGC	9 cut(s)	1043, 1046, 1195, 1532, 1574, 1847, 1936, 2744, 2774
ApoI	RAATTY	5 cut(s)	179, 581, 1629, 1773, 1895
AseI	ATTAAT	1 cut(s)	1566
AsiGI	ACCGGT	1 cut(s)	1034
Asp700I	GAANNNNTTC	5 cut(s)	172, 1067, 2126, 2736, 2767
AspLEI	GCGC	6 cut(s)	1149, 1188, 1190, 1269, 1271, 2691
AspS9I	GGNCC	8 cut(s)	89, 1234, 1859, 2153, 2433, 2855, 2909, 3167
AsuC2I	CCSGG	5 cut(s)	605, 1082, 1160, 1231, 1561
AsuHPI	GGTGA	7 cut(s)	1183, 1280, 2342, 2351, 2549, 2945, 2992
AsuII	TTCGAA	1 cut(s)	1753
AvaI	CYCGRG	1 cut(s)	2453
AvaII	GGWCC	5 cut(s)	2153, 2433, 2855, 2909, 3167
AxyI	CCTNAGG	1 cut(s)	1929
BaeGI	GKGCMC	1 cut(s)	1087
BaeI	ACNNNNGTAYC	4 cut(s)	784, 817, 2301, 2334
BamHI	GGATCC	2 cut(s)	1162, 2713
BanI	GGYRCC	5 cut(s)	279, 1037, 1126, 2264, 2688
BanII	GRGCYC	1 cut(s)	1319
BauI	CACGAG	1 cut(s)	198
Bbv12I	GWGCWC	3 cut(s)	962, 2824, 2982
BbvI	GCAGC	9 cut(s)	1030, 1033, 1207, 1519, 1586, 1834, 1948, 2731, 2786
BccI	CCATC	9 cut(s)	375, 1014, 1330, 1489, 1654, 1694, 1952, 2139, 2444
BceAI	ACGGC	1 cut(s)	1081
BciVI	GTATCC	1 cut(s)	630
BcnI	CCSGG	5 cut(s)	605, 1082, 1160, 1231, 1561
BcoDI	GTCTC	5 cut(s)	148, 886, 2009, 2370, 2384
BcuI	ACTAGT	1 cut(s)	2669
BfaI	CTAG	5 cut(s)	410, 474, 1430, 1506, 2670
BfmI	CTRYAG	1 cut(s)	2175
BfoI	RGCGCY	1 cut(s)	2692
BfuAI	ACCTGC	1 cut(s)	1852
BfuI	GTATCC	1 cut(s)	630
BglI	GCCNNNNNGGC	1 cut(s)	1055
BglII	AGATCT	1 cut(s)	3008
BlpI	GCTNAGC	1 cut(s)	1823
Bme18I	GGWCC	5 cut(s)	2153, 2433, 2855, 2909, 3167
BmeRI	GACNNNNNGTC	1 cut(s)	2362
BmeT110I	CYCGRG	1 cut(s)	2453
BmgBI	CACGTC	1 cut(s)	1286
BmgT120I	GGNCC	8 cut(s)	89, 1234, 1859, 2153, 2433, 2855, 2909, 3167
BmrI	ACTGGG	2 cut(s)	2439, 2964
BmsI	GCATC	4 cut(s)	1254, 1511, 1561, 2916
BmuI	ACTGGG	2 cut(s)	2439, 2964
BpmI	CTGGAG	3 cut(s)	1475, 1899, 2178
Bpu10I	CCTNAGC	1 cut(s)	85
Bpu1102I	GCTNAGC	1 cut(s)	1823
Bpu14I	TTCGAA	1 cut(s)	1753
BpuEI	CTTGAG	5 cut(s)	58, 64, 1694, 1874, 1984
BpuMI	CCSGG	5 cut(s)	605, 1082, 1160, 1231, 1561
BsaBI	GATNNNNATC	1 cut(s)	1685
BsaHI	GRCGYC	2 cut(s)	272, 2689
BsaI	GGTCTC	1 cut(s)	148
BsaJI	CCNNGG	8 cut(s)	266, 930, 1116, 1219, 1230, 1998, 2149, 2623
BsaWI	WCCGGW	3 cut(s)	505, 1034, 3013
Bse118I	RCCGGY	2 cut(s)	1034, 1129
Bse21I	CCTNAGG	1 cut(s)	1929
Bse3DI	GCAATG	4 cut(s)	1305, 1336, 1534, 3065
Bse8I	GATNNNNATC	1 cut(s)	1685
BseDI	CCNNGG	8 cut(s)	266, 930, 1116, 1219, 1230, 1998, 2149, 2623
BseGI	GGATG	7 cut(s)	142, 386, 1006, 1456, 1891, 2131, 2804
BseJI	GATNNNNATC	1 cut(s)	1685
BseMI	GCAATG	4 cut(s)	1305, 1336, 1534, 3065
BseMII	CTCAG	4 cut(s)	99, 1407, 1512, 1837
BsePI	GCGCGC	2 cut(s)	1186, 1267
BseRI	GAGGAG	3 cut(s)	785, 1433, 1476
BseSI	GKGCMC	1 cut(s)	1087
BseXI	GCAGC	9 cut(s)	1030, 1033, 1207, 1519, 1586, 1834, 1948, 2731, 2786
BseYI	CCCAGC	2 cut(s)	230, 2777
BsgI	GTGCAG	2 cut(s)	114, 1214
Bsh1236I	CGCG	5 cut(s)	1118, 1147, 1188, 1190, 1269
Bsh1285I	CGRYCG	1 cut(s)	1203
BshFI	GGCC	6 cut(s)	90, 1074, 1236, 1549, 1861, 2649
BshNI	GGYRCC	5 cut(s)	279, 1037, 1126, 2264, 2688
BshTI	ACCGGT	1 cut(s)	1034
BsiEI	CGRYCG	1 cut(s)	1203
BsiHKAI	GWGCWC	3 cut(s)	962, 2824, 2982
BsiHKCI	CYCGRG	1 cut(s)	2453
BslFI	GGGAC	3 cut(s)	2446, 2626, 2922
BsmAI	GTCTC	5 cut(s)	148, 886, 2009, 2370, 2384
BsmFI	GGGAC	3 cut(s)	2446, 2626, 2922
BsmI	GAATGC	1 cut(s)	1694
BsnI	GGCC	6 cut(s)	90, 1074, 1236, 1549, 1861, 2649
Bso31I	GGTCTC	1 cut(s)	148
BsoBI	CYCGRG	1 cut(s)	2453
Bsp119I	TTCGAA	1 cut(s)	1753
Bsp1286I	GDGCHC	5 cut(s)	962, 1087, 1319, 2824, 2982
Bsp1720I	GCTNAGC	1 cut(s)	1823
BspANI	GGCC	6 cut(s)	90, 1074, 1236, 1549, 1861, 2649
BspCNI	CTCAG	4 cut(s)	98, 1408, 1513, 1836
BspFNI	CGCG	5 cut(s)	1118, 1147, 1188, 1190, 1269
BspMI	ACCTGC	1 cut(s)	1852
BspPI	GGATC	9 cut(s)	197, 984, 1157, 1170, 1365, 1411, 1970, 2708, 2721
BspQI	GCTCTTC	1 cut(s)	2748
BspT104I	TTCGAA	1 cut(s)	1753
BspT107I	GGYRCC	5 cut(s)	279, 1037, 1126, 2264, 2688
BspTNI	GGTCTC	1 cut(s)	148
BsrDI	GCAATG	4 cut(s)	1305, 1336, 1534, 3065
BsrFI	RCCGGY	2 cut(s)	1034, 1129
BssAI	RCCGGY	2 cut(s)	1034, 1129
BssECI	CCNNGG	8 cut(s)	266, 930, 1116, 1219, 1230, 1998, 2149, 2623
BssHII	GCGCGC	2 cut(s)	1186, 1267
BssNI	GRCGYC	2 cut(s)	272, 2689
BssSI	CACGAG	1 cut(s)	198
BssT1I	CCWWGG	3 cut(s)	266, 930, 2149
Bst2BI	CACGAG	1 cut(s)	198
Bst6I	CTCTTC	3 cut(s)	73, 2748, 3081
BstACI	GRCGYC	2 cut(s)	272, 2689
BstBI	TTCGAA	1 cut(s)	1753
BstDEI	CTNAG	6 cut(s)	85, 779, 1416, 1521, 1823, 1929
BstDSI	CCRYGG	2 cut(s)	1116, 2623
BstENI	CCTNNNNNAGG	1 cut(s)	1610
BstF5I	GGATG	7 cut(s)	142, 386, 1006, 1456, 1891, 2131, 2804
BstFNI	CGCG	5 cut(s)	1118, 1147, 1188, 1190, 1269
BstH2I	RGCGCY	1 cut(s)	2692
BstHHI	GCGC	6 cut(s)	1149, 1188, 1190, 1269, 1271, 2691
BstMAI	GTCTC	5 cut(s)	148, 886, 2009, 2370, 2384
BstMCI	CGRYCG	1 cut(s)	1203
BstNSI	RCATGY	2 cut(s)	571, 2093
BstSFI	CTRYAG	1 cut(s)	2175
BstSLI	GKGCMC	1 cut(s)	1087
BstUI	CGCG	5 cut(s)	1118, 1147, 1188, 1190, 1269
BstV1I	GCAGC	9 cut(s)	1030, 1033, 1207, 1519, 1586, 1834, 1948, 2731, 2786
BstX2I	RGATCY	5 cut(s)	202, 1162, 1370, 2713, 3008
BstXI	CCANNNNNNTGG	1 cut(s)	950
BstYI	RGATCY	5 cut(s)	202, 1162, 1370, 2713, 3008
Bsu36I	CCTNAGG	1 cut(s)	1929
BsuI	GTATCC	1 cut(s)	630
BsuRI	GGCC	6 cut(s)	90, 1074, 1236, 1549, 1861, 2649
BtgI	CCRYGG	2 cut(s)	1116, 2623
BtrI	CACGTC	1 cut(s)	1286
BtsCI	GGATG	7 cut(s)	142, 386, 1006, 1456, 1891, 2131, 2804
BtsI	GCAGTG	1 cut(s)	1731
BtsIMutI	CAGTG	7 cut(s)	131, 486, 498, 1731, 1841, 2487, 2977
BveI	ACCTGC	1 cut(s)	1852
CaiI	CAGNNNCTG	2 cut(s)	230, 2777
CfoI	GCGC	6 cut(s)	1149, 1188, 1190, 1269, 1271, 2691
Cfr10I	RCCGGY	2 cut(s)	1034, 1129
Cfr13I	GGNCC	8 cut(s)	89, 1234, 1859, 2153, 2433, 2855, 2909, 3167
Cfr42I	CCGCGG	1 cut(s)	1119
CseI	GACGC	2 cut(s)	261, 1703
CsiI	ACCWGGT	1 cut(s)	2320
Csp6I	GTAC	7 cut(s)	452, 477, 496, 907, 2318, 2458, 2882
CspAI	ACCGGT	1 cut(s)	1034
CviAII	CATG	7 cut(s)	118, 568, 1545, 2090, 2296, 2440, 2930
CviQI	GTAC	7 cut(s)	452, 477, 496, 907, 2318, 2458, 2882
DdeI	CTNAG	6 cut(s)	85, 779, 1416, 1521, 1823, 1929
DinI	GGCGCC	1 cut(s)	2690
DriI	GACNNNNNGTC	1 cut(s)	2362
Eam1104I	CTCTTC	3 cut(s)	73, 2748, 3081
Eam1105I	GACNNNNNGTC	1 cut(s)	2362
EarI	CTCTTC	3 cut(s)	73, 2748, 3081
EciI	GGCGGA	1 cut(s)	1216
Eco130I	CCWWGG	3 cut(s)	266, 930, 2149
Eco24I	GRGCYC	1 cut(s)	1319
Eco31I	GGTCTC	1 cut(s)	148
Eco32I	GATATC	1 cut(s)	239
Eco47I	GGWCC	5 cut(s)	2153, 2433, 2855, 2909, 3167
Eco57I	CTGAAG	6 cut(s)	87, 293, 381, 837, 1592, 2754
Eco81I	CCTNAGG	1 cut(s)	1929
Eco88I	CYCGRG	1 cut(s)	2453
EcoNI	CCTNNNNNAGG	1 cut(s)	1610
EcoO109I	RGGNCCY	1 cut(s)	3167
EcoRI	GAATTC	2 cut(s)	179, 581
EcoRV	GATATC	1 cut(s)	239
EcoT14I	CCWWGG	3 cut(s)	266, 930, 2149
EcoT22I	ATGCAT	1 cut(s)	2931
EcoT38I	GRGCYC	1 cut(s)	1319
EgeI	GGCGCC	1 cut(s)	2690
EheI	GGCGCC	1 cut(s)	2690
ErhI	CCWWGG	3 cut(s)	266, 930, 2149
FaeI	CATG	7 cut(s)	121, 571, 1548, 2093, 2299, 2443, 2933
FalI	AAGNNNNNCTT	4 cut(s)	994, 1026, 2721, 2753
FaqI	GGGAC	3 cut(s)	2446, 2626, 2922
FatI	CATG	7 cut(s)	117, 567, 1544, 2089, 2295, 2439, 2929
FauI	CCCGC	2 cut(s)	1152, 1163
FauNDI	CATATG	5 cut(s)	256, 375, 1981, 2020, 2446
FblI	GTMKAC	2 cut(s)	1840, 2917
FokI	GGATG	7 cut(s)	149, 393, 993, 1443, 1898, 2118, 2791
FriOI	GRGCYC	1 cut(s)	1319
FspBI	CTAG	5 cut(s)	410, 474, 1430, 1506, 2670
GlaI	GCGC	6 cut(s)	1148, 1187, 1189, 1268, 1270, 2690
GsaI	CCCAGC	2 cut(s)	234, 2781
GsuI	CTGGAG	3 cut(s)	1475, 1899, 2178
HaeII	RGCGCY	1 cut(s)	2692
HaeIII	GGCC	6 cut(s)	90, 1074, 1236, 1549, 1861, 2649
HgaI	GACGC	2 cut(s)	261, 1703
HhaI	GCGC	6 cut(s)	1149, 1188, 1190, 1269, 1271, 2691
Hin1I	GRCGYC	2 cut(s)	272, 2689
Hin1II	CATG	7 cut(s)	121, 571, 1548, 2093, 2299, 2443, 2933
Hin6I	GCGC	6 cut(s)	1147, 1186, 1188, 1267, 1269, 2689
HinP1I	GCGC	6 cut(s)	1147, 1186, 1188, 1267, 1269, 2689
HincII	GTYRAC	2 cut(s)	2347, 2918
HindII	GTYRAC	2 cut(s)	2347, 2918
HindIII	AAGCTT	2 cut(s)	524, 753
HpaI	GTTAAC	1 cut(s)	2347
HphI	GGTGA	7 cut(s)	1183, 1280, 2342, 2351, 2549, 2945, 2992
Hpy166II	GTNNAC	7 cut(s)	452, 498, 874, 1841, 2347, 2855, 2918
Hpy8I	GTNNAC	7 cut(s)	452, 498, 874, 1841, 2347, 2855, 2918
Hpy99I	CGWCG	3 cut(s)	1171, 1719, 2922
HpyCH4IV	ACGT	2 cut(s)	329, 1285
HpyF3I	CTNAG	6 cut(s)	85, 779, 1416, 1521, 1823, 1929
HpySE526I	ACGT	2 cut(s)	329, 1285
Hsp92I	GRCGYC	2 cut(s)	272, 2689
Hsp92II	CATG	7 cut(s)	121, 571, 1548, 2093, 2299, 2443, 2933
HspAI	GCGC	6 cut(s)	1147, 1186, 1188, 1267, 1269, 2689
KasI	GGCGCC	1 cut(s)	2688
KroI	GCCGGC	1 cut(s)	1129
KroNI	GCCGGC	1 cut(s)	1131
KspAI	GTTAAC	1 cut(s)	2347
KspI	CCGCGG	1 cut(s)	1119
LguI	GCTCTTC	1 cut(s)	2748
Lsp1109I	GCAGC	9 cut(s)	1030, 1033, 1207, 1519, 1586, 1834, 1948, 2731, 2786
LweI	GCATC	4 cut(s)	1254, 1511, 1561, 2916
MabI	ACCWGGT	1 cut(s)	2320
MaeI	CTAG	5 cut(s)	410, 474, 1430, 1506, 2670
MaeII	ACGT	2 cut(s)	329, 1285
MaeIII	GTNAC	4 cut(s)	185, 838, 1171, 1286
MfeI	CAATTG	2 cut(s)	534, 2748
MflI	RGATCY	5 cut(s)	202, 1162, 1370, 2713, 3008
MhlI	GDGCHC	5 cut(s)	962, 1087, 1319, 2824, 2982
Mly113I	GGCGCC	1 cut(s)	2689
MlyI	GAGTC	5 cut(s)	835, 888, 1241, 1430, 2810
MmeI	TCCRAC	4 cut(s)	1190, 1946, 2485, 2575
Mph1103I	ATGCAT	1 cut(s)	2931
MroNI	GCCGGC	1 cut(s)	1129
MroXI	GAANNNNTTC	5 cut(s)	172, 1067, 2126, 2736, 2767
MslI	CAYNNNNRTG	2 cut(s)	15, 996
MspA1I	CMGCKG	3 cut(s)	1043, 1118, 2777
MunI	CAATTG	2 cut(s)	534, 2748
Mva1269I	GAATGC	1 cut(s)	1694
MvnI	CGCG	5 cut(s)	1118, 1147, 1188, 1190, 1269
NaeI	GCCGGC	1 cut(s)	1131
NarI	GGCGCC	1 cut(s)	2689
NciI	CCSGG	5 cut(s)	605, 1082, 1160, 1231, 1561
NdeI	CATATG	5 cut(s)	256, 375, 1981, 2020, 2446
NgoMIV	GCCGGC	1 cut(s)	1129
NlaIII	CATG	7 cut(s)	121, 571, 1548, 2093, 2299, 2443, 2933
NmeAIII	GCCGAG	1 cut(s)	1086
NmuCI	GTSAC	3 cut(s)	838, 1171, 1286
NsiI	ATGCAT	1 cut(s)	2931
NspI	RCATGY	2 cut(s)	571, 2093
NspV	TTCGAA	1 cut(s)	1753
PaeR7I	CTCGAG	1 cut(s)	2453
PauI	GCGCGC	2 cut(s)	1186, 1267
PciSI	GCTCTTC	1 cut(s)	2748
PcsI	WCGNNNNNNNCGW	1 cut(s)	1209
PctI	GAATGC	1 cut(s)	1694
PdiI	GCCGGC	1 cut(s)	1131
PdmI	GAANNNNTTC	5 cut(s)	172, 1067, 2126, 2736, 2767
PfeI	GAWTC	6 cut(s)	1140, 1214, 1750, 2512, 2598, 2897
PflFI	GACNNNGTC	1 cut(s)	2913
PflMI	CCANNNNNTGG	1 cut(s)	2150
PfoI	TCCNGGA	2 cut(s)	949, 2703
PinAI	ACCGGT	1 cut(s)	1034
Ple19I	CGATCG	1 cut(s)	1203
PleI	GAGTC	5 cut(s)	835, 888, 1241, 1429, 2809
PluTI	GGCGCC	1 cut(s)	2692
PpsI	GAGTC	5 cut(s)	835, 888, 1241, 1429, 2809
PpuMI	RGGWCCY	1 cut(s)	3167
PshBI	ATTAAT	1 cut(s)	1566
Psp5II	RGGWCCY	1 cut(s)	3167
PspFI	CCCAGC	2 cut(s)	230, 2777
PspPI	GGNCC	8 cut(s)	89, 1234, 1859, 2153, 2433, 2855, 2909, 3167
PspPPI	RGGWCCY	1 cut(s)	3167
PspXI	VCTCGAGB	1 cut(s)	2453
PsrI	GAACNNNNNNTAC	2 cut(s)	535, 567
PstNI	CAGNNNCTG	2 cut(s)	230, 2777
PsuI	RGATCY	5 cut(s)	202, 1162, 1370, 2713, 3008
PsyI	GACNNNGTC	1 cut(s)	2913
PteI	GCGCGC	2 cut(s)	1186, 1267
PvuI	CGATCG	1 cut(s)	1203
PvuII	CAGCTG	1 cut(s)	2777
RsaI	GTAC	7 cut(s)	453, 478, 497, 908, 2319, 2459, 2883
RsaNI	GTAC	7 cut(s)	452, 477, 496, 907, 2318, 2458, 2882
RseI	CAYNNNNRTG	2 cut(s)	15, 996
SacII	CCGCGG	1 cut(s)	1119
SalI	GTCGAC	1 cut(s)	2916
SapI	GCTCTTC	1 cut(s)	2748
Sau96I	GGNCC	8 cut(s)	89, 1234, 1859, 2153, 2433, 2855, 2909, 3167
SchI	GAGTC	5 cut(s)	835, 888, 1241, 1430, 2810
SduI	GDGCHC	5 cut(s)	962, 1087, 1319, 2824, 2982
SexAI	ACCWGGT	1 cut(s)	2320
SfaNI	GCATC	4 cut(s)	1254, 1511, 1561, 2916
SfcI	CTRYAG	1 cut(s)	2175
SfoI	GGCGCC	1 cut(s)	2690
Sfr274I	CTCGAG	1 cut(s)	2453
Sfr303I	CCGCGG	1 cut(s)	1119
SfuI	TTCGAA	1 cut(s)	1753
SgrBI	CCGCGG	1 cut(s)	1119
SinI	GGWCC	5 cut(s)	2153, 2433, 2855, 2909, 3167
SlaI	CTCGAG	1 cut(s)	2453
SmiMI	CAYNNNNRTG	2 cut(s)	15, 996
SmlI	CTYRAG	6 cut(s)	73, 79, 1673, 1853, 1963, 2453
SmoI	CTYRAG	6 cut(s)	73, 79, 1673, 1853, 1963, 2453
SpeI	ACTAGT	1 cut(s)	2669
SspDI	GGCGCC	1 cut(s)	2688
SspI	AATATT	2 cut(s)	298, 2223
SspMI	CTAG	5 cut(s)	410, 474, 1430, 1506, 2670
StyI	CCWWGG	3 cut(s)	266, 930, 2149
TaiI	ACGT	2 cut(s)	332, 1288
TaqI	TCGA	5 cut(s)	1245, 1753, 2050, 2454, 2917
TaqII	GACCGA	1 cut(s)	114
TatI	WGTACW	3 cut(s)	476, 495, 2457
TauI	GCSGC	2 cut(s)	1043, 1052
TfiI	GAWTC	6 cut(s)	1140, 1214, 1750, 2512, 2598, 2897
TscAI	CASTG	7 cut(s)	138, 493, 505, 1738, 1841, 2494, 2977
TseFI	GTSAC	3 cut(s)	838, 1171, 1286
TseI	GCWGC	9 cut(s)	1043, 1046, 1195, 1532, 1574, 1847, 1936, 2744, 2774
Tsp45I	GTSAC	3 cut(s)	838, 1171, 1286
TspDTI	ATGAA	9 cut(s)	181, 672, 765, 2260, 2312, 2481, 2977, 3011, 3099
TspGWI	ACGGA	2 cut(s)	173, 2864
TspRI	CASTG	7 cut(s)	138, 493, 505, 1738, 1841, 2494, 2977
Tth111I	GACNNNGTC	1 cut(s)	2913
Van91I	CCANNNNNTGG	1 cut(s)	2150
VpaK11BI	GGWCC	5 cut(s)	2153, 2433, 2855, 2909, 3167
VspI	ATTAAT	1 cut(s)	1566
XagI	CCTNNNNNAGG	1 cut(s)	1610
XapI	RAATTY	5 cut(s)	179, 581, 1629, 1773, 1895
XbaI	TCTAGA	1 cut(s)	1429
XceI	RCATGY	2 cut(s)	571, 2093
XcmI	CCANNNNNNNNNTGG	5 cut(s)	970, 1217, 1869, 2018, 2661
XhoI	CTCGAG	1 cut(s)	2453
XmiI	GTMKAC	2 cut(s)	1840, 2917
XmnI	GAANNNNTTC	5 cut(s)	172, 1067, 2126, 2736, 2767
XspI	CTAG	5 cut(s)	410, 474, 1430, 1506, 2670
Zsp2I	ATGCAT	1 cut(s)	2931

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.