Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0004924

Physical Location & Seq

Genomic Coordinates Forward (+)

80022280 .. 80028156

Gene Structure 5877 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00058150.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1815 bp

ATGGACAGATCCAGATTAGATTTACGATGTTATCATTCTGGATCAACACAGTCTGAGGAGTCTGCTCTAGACTTGGAAAGGAACTACTGCTGTCATCCTAATCTCCCTTCTTCAAGTCCATCTCCTCTCCAGCCATTTGCATCTAGTGGTCAGCACTCTGAGAGCAATGCTGCCTACTTCTCATGGCCTACTTTGACCCGGATTAATGATGCAGCAGAAGATAGGGCAAACTATTTTGGAAACCTTCAGAAGGGTGTTCTTCCTGAAATTTTGGGGCGGTTGCCATCAGGACAGCGGGCTACAACCTTGCTTGAGCTGATGACCATCAGGGCATTCCATAGCAAGATATTGCGTCGCTTTAGTCTTGGCACTGCCATTGGGTTTCGGATTCAAAATGGTGTCTTGACAGATATTCCAGCTATTCTTGTCTTTGTTGCCCGTAAAGCTCACAGGCATTGGCTCAGCCATTCACAGTGTCTACCTGCTGCTCTTGAGGGGCCAGGAGGTGTATGGTGTGATGTGGATGTTGTGGAATTTTCCTATTTTGGTTCTCCAGCTCCAACTCCTAAGGAACAGCTTTACACAGAGCTTGCAGATGGCTTGAGGGGAAATGATCCATATGTCGGTTCTGGTTCCCAGGTTGCAAGCCAGGAAACATATGGAACTATGGGTGCTATTGTTAAAAGTCGAACAGGAAATAGACAAGTTGGTTTCCTCACAAATAGGCATGTGGCAGTTGATTTGGACTATCCAAACCAGAAAATGTTCCATCCTATGCCACCAAGCCTTGGACCTGGAGTGTATCTTGGTGCTGTAGAGAGGGCAACATCTTTTATCACAGATGACCTTTGGTATGGAATATTTGCTGGAACAAACCCAGAAACATTTGTGCGAGCTGACGGTGCCTTCATTCCTTTTGCTGACGATTTCAACATGAAGAATGTAATTACAACTGTACCAGGTGTGGGTGAGATTGGTGATGTTAACATCATAGACTTGCAGTCTCCAATCAACAGTCTCATTGGTAGGCAAGTGATAAAAGTTGGGAGAAGTTCAGGCTTGACTACTGGGACCATCATGGCATATGCCCTCGAGTACAATGATGAAAAAGGGATTTGTTTCTTCACTGATTTTTTTGTTGTTGGAGAGAATCAGCAGACTTTTGATCTTGAAGGTGATAGTGGAAGCCTCATTCTATTAACTGGTCAGAATGGGGAGAAGCCACGACCTGTTGGGATCATTTGGGGTGGGACAGCTAACCGTGGTCGCTTAAAACTGAAAAAGGGCCAACCACCTGAAAATTGGACTAGTGGAGTTGATCTCGGGCGCCTTCTTGACCTCCTGGAACTGGATCTGATAACAACCGAAGAAGGGCTTCAAGCTGCAATTGAAGAGCAACGAAATGCTTCAGCAGCTGGGATTGGTTCCACAGTTGCAGAGTCATCCCCTGCTGTCTGTGCTCCATATAAACATAAGCTACAAGATAACTGTGGACCTCTTGGTTTAAACTTTCATCAAGTACCATTTGAAGGCGAATCTTGTCTGGGACCAAGTCGACGATTGATGCATGGTGACTTTCACATTGAAAATGGTGTTGAAACAGCTCCCAGTGTTGAGCACCAGTTCATTCCGAGTTTCACTAATAGATCTCCAGTAATTCATAGCAATCAAGAGGAAAATCCAGTATCAAAAAACGTTTTAGCATTGCGGAGTGGCTCAGATGAAGAGATTTCTGTTTCCTTACAGTTAGGAGAGCCTGAACCAAAGAGAAGAAAAAACTACAACTCTTTCTTTAGCACTAAAGGACCCAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

604

Amino Acids

65.9

Weight (kDa)

5.59

Isoelectric Point (pI)

50.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAL1_N	PF25608	98 - 177	1.4e-42	NARROW LEAF 1 N-terminal domain
Nal1_C	PF25819	190 - 457	3e-158	Nal1 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004924)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35155 AT2G35155 AT5G45030 AT5G45030
fragaria_vesca	FvH4_3g12240 FvH4_3g12240 FvH4_3g12240 FvH4_3g12240 FvH4_3g12240 FvH4_3g12240
malus_domestica	MD05G1252600.v1.1 MD10G1233600.v1.1
prunus_persica	Prupe.4G111500_v2.0.a1 Prupe.4G111500_v2.0.a1 Prupe.4G111500_v2.0.a1 Prupe.4G111500_v2.0.a1
pyrus_communis	pycom10g19590
rosa_chinensis	RchiOBHm_Chr5g0020051
rosa_laevigata	RLG00000032494 RLG00000032496
rosa_multiflora	Rmu_sc0002250.1_g000001 Rmu_sc0009586.1_g000004
rosa_roxburghii	Rroxscaffold_1G00058150
rosa_rugosa	Rorug05G0056400 Rorug05G0056500
rosa_samantha	Rh5AG146600 Rh5BG146100 Rh5CG157600 Rh5DG145500
rosa_wichuraiana	Rw5G012940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	490
AccB1I	GGYRCC	2 cut(s)	902, 1326
AccB7I	CCANNNNNTGG	1 cut(s)	788
AccI	GTMKAC	2 cut(s)	478, 1555
AciI	CCGC	3 cut(s)	277, 295, 1708
AclI	AACGTT	1 cut(s)	1695
AclWI	GGATC	5 cut(s)	3, 49, 608, 1244, 1359
AcsI	RAATTY	2 cut(s)	267, 533
AcuI	CTGAAG	2 cut(s)	230, 1392
AcyI	GRCGYC	1 cut(s)	1327
AfaI	GTAC	3 cut(s)	957, 1097, 1521
AfiI	CCNNNNNNNGG	7 cut(s)	250, 623, 788, 965, 1348, 1371, 1529
AgsI	TTSAA	9 cut(s)	114, 392, 931, 1172, 1379, 1391, 1529, 1586, 1598
AhdI	GACNNNNNGTC	1 cut(s)	1000
AhlI	ACTAGT	1 cut(s)	1307
AjnI	CCWGG	6 cut(s)	499, 636, 648, 793, 958, 1341
Alw21I	GWGCWC	2 cut(s)	1462, 1620
Alw26I	GTCTC	2 cut(s)	1008, 1022
AlwI	GGATC	5 cut(s)	3, 49, 608, 1244, 1359
AlwNI	CAGNNNCTG	1 cut(s)	1415
Ama87I	CYCGRG	2 cut(s)	1091, 1322
AoxI	GGCC	3 cut(s)	185, 497, 1285
ApeKI	GCWGC	5 cut(s)	170, 212, 485, 1382, 1412
ApoI	RAATTY	2 cut(s)	267, 533
AseI	ATTAAT	1 cut(s)	204
Asp700I	GAANNNNTTC	3 cut(s)	764, 1374, 1405
AspLEI	GCGC	1 cut(s)	1329
AspS9I	GGNCC	7 cut(s)	497, 791, 1071, 1285, 1493, 1547, 1805
AsuC2I	CCSGG	1 cut(s)	199
AsuHPI	GGTGA	4 cut(s)	980, 989, 1187, 1583
AvaI	CYCGRG	2 cut(s)	1091, 1322
AvaII	GGWCC	5 cut(s)	791, 1071, 1493, 1547, 1805
AxyI	CCTNAGG	1 cut(s)	567
BaeI	ACNNNNGTAYC	2 cut(s)	939, 972
BanI	GGYRCC	2 cut(s)	902, 1326
Bbv12I	GWGCWC	2 cut(s)	1462, 1620
BbvI	GCAGC	5 cut(s)	157, 224, 472, 1369, 1424
BccI	CCATC	6 cut(s)	127, 292, 332, 590, 777, 1082
BciT130I	CCWGG	6 cut(s)	501, 638, 650, 795, 960, 1343
BcnI	CCSGG	1 cut(s)	199
BcoDI	GTCTC	2 cut(s)	1008, 1022
BcuI	ACTAGT	1 cut(s)	1307
BfaI	CTAG	3 cut(s)	68, 144, 1308
BfmI	CTRYAG	1 cut(s)	813
BfoI	RGCGCY	1 cut(s)	1330
BfuAI	ACCTGC	1 cut(s)	490
BglII	AGATCT	1 cut(s)	1646
BisI	GCNGC	5 cut(s)	171, 213, 486, 1383, 1413
BlpI	GCTNAGC	1 cut(s)	461
BlsI	GCNGC	5 cut(s)	172, 214, 487, 1384, 1414
Bme1390I	CCNGG	7 cut(s)	199, 501, 638, 650, 795, 960, 1343
Bme18I	GGWCC	5 cut(s)	791, 1071, 1493, 1547, 1805
BmeRI	GACNNNNNGTC	1 cut(s)	1000
BmeT110I	CYCGRG	2 cut(s)	1091, 1322
BmgT120I	GGNCC	7 cut(s)	497, 791, 1071, 1285, 1493, 1547, 1805
BmiI	GGNNCC	8 cut(s)	498, 634, 904, 1072, 1328, 1426, 1548, 1807
BmrFI	CCNGG	7 cut(s)	199, 501, 638, 650, 795, 960, 1343
BmrI	ACTGGG	2 cut(s)	1077, 1602
BmsI	GCATC	3 cut(s)	149, 199, 1554
BmuI	ACTGGG	2 cut(s)	1077, 1602
BplI	GAGNNNNNCTC	2 cut(s)	1305, 1337
BpmI	CTGGAG	4 cut(s)	113, 537, 816, 1635
Bpu1102I	GCTNAGC	1 cut(s)	461
BpuEI	CTTGAG	3 cut(s)	332, 512, 622
BpuMI	CCSGG	1 cut(s)	199
BsaBI	GATNNNNATC	1 cut(s)	323
BsaHI	GRCGYC	1 cut(s)	1327
BsaJI	CCNNGG	3 cut(s)	636, 787, 1261
Bsc4I	CCNNNNNNNGG	7 cut(s)	250, 623, 788, 965, 1348, 1371, 1529
Bse1I	ACTGG	7 cut(s)	1072, 1207, 1353, 1608, 1621, 1652, 1682
Bse21I	CCTNAGG	1 cut(s)	567
Bse3DI	GCAATG	2 cut(s)	172, 1703
Bse8I	GATNNNNATC	1 cut(s)	323
BseBI	CCWGG	6 cut(s)	501, 638, 650, 795, 960, 1343
BseDI	CCNNGG	3 cut(s)	636, 787, 1261
BseGI	GGATG	4 cut(s)	94, 529, 769, 1442
BseJI	GATNNNNATC	1 cut(s)	323
BseLI	CCNNNNNNNGG	7 cut(s)	250, 623, 788, 965, 1348, 1371, 1529
BseMI	GCAATG	2 cut(s)	172, 1703
BseMII	CTCAG	4 cut(s)	45, 150, 475, 1731
BseNI	ACTGG	7 cut(s)	1072, 1207, 1353, 1608, 1621, 1652, 1682
BseRI	GAGGAG	2 cut(s)	71, 114
BseXI	GCAGC	5 cut(s)	157, 224, 472, 1369, 1424
BseYI	CCCAGC	1 cut(s)	1415
BshFI	GGCC	3 cut(s)	187, 499, 1287
BshNI	GGYRCC	2 cut(s)	902, 1326
BsiHKAI	GWGCWC	2 cut(s)	1462, 1620
BsiHKCI	CYCGRG	2 cut(s)	1091, 1322
BsiSI	CCGG	1 cut(s)	199
BslFI	GGGAC	3 cut(s)	1084, 1264, 1560
BslI	CCNNNNNNNGG	7 cut(s)	250, 623, 788, 965, 1348, 1371, 1529
BsmAI	GTCTC	2 cut(s)	1008, 1022
BsmFI	GGGAC	3 cut(s)	1084, 1264, 1560
BsmI	GAATGC	1 cut(s)	332
BsnI	GGCC	3 cut(s)	187, 499, 1287
BsoBI	CYCGRG	2 cut(s)	1091, 1322
Bsp1286I	GDGCHC	2 cut(s)	1462, 1620
Bsp143I	GATC	8 cut(s)	8, 41, 613, 1165, 1236, 1318, 1351, 1646
Bsp1720I	GCTNAGC	1 cut(s)	461
BspACI	CCGC	3 cut(s)	277, 295, 1708
BspANI	GGCC	3 cut(s)	187, 499, 1287
BspCNI	CTCAG	4 cut(s)	46, 151, 474, 1730
BspLI	GGNNCC	8 cut(s)	498, 634, 904, 1072, 1328, 1426, 1548, 1807
BspMI	ACCTGC	1 cut(s)	490
BspPI	GGATC	5 cut(s)	3, 49, 608, 1244, 1359
BspQI	GCTCTTC	1 cut(s)	1386
BspT107I	GGYRCC	2 cut(s)	902, 1326
BsrDI	GCAATG	2 cut(s)	172, 1703
BsrI	ACTGG	7 cut(s)	1072, 1207, 1353, 1608, 1621, 1652, 1682
BssECI	CCNNGG	3 cut(s)	636, 787, 1261
BssMI	GATC	8 cut(s)	8, 41, 613, 1165, 1236, 1318, 1351, 1646
BssNI	GRCGYC	1 cut(s)	1327
BssT1I	CCWWGG	1 cut(s)	787
Bst2UI	CCWGG	6 cut(s)	501, 638, 650, 795, 960, 1343
Bst4CI	ACNGT	9 cut(s)	51, 474, 902, 955, 1016, 1262, 1432, 1490, 1746
Bst6I	CTCTTC	2 cut(s)	1386, 1719
BstACI	GRCGYC	1 cut(s)	1327
BstC8I	GCNNGC	4 cut(s)	297, 591, 646, 894
BstDEI	CTNAG	5 cut(s)	54, 159, 461, 567, 1717
BstDSI	CCRYGG	1 cut(s)	1261
BstENI	CCTNNNNNAGG	1 cut(s)	248
BstF5I	GGATG	4 cut(s)	94, 529, 769, 1442
BstH2I	RGCGCY	1 cut(s)	1330
BstHHI	GCGC	1 cut(s)	1329
BstKTI	GATC	8 cut(s)	11, 44, 616, 1168, 1239, 1321, 1354, 1649
BstMAI	GTCTC	2 cut(s)	1008, 1022
BstMBI	GATC	8 cut(s)	8, 41, 613, 1165, 1236, 1318, 1351, 1646
BstMWI	GCNNNNNNNGC	4 cut(s)	443, 902, 1412, 1457
BstNI	CCWGG	6 cut(s)	501, 638, 650, 795, 960, 1343
BstNSI	RCATGY	1 cut(s)	731
BstSCI	CCNGG	7 cut(s)	197, 499, 636, 648, 793, 958, 1341
BstSFI	CTRYAG	1 cut(s)	813
BstV1I	GCAGC	5 cut(s)	157, 224, 472, 1369, 1424
BstX2I	RGATCY	3 cut(s)	8, 1351, 1646
BstYI	RGATCY	3 cut(s)	8, 1351, 1646
Bsu36I	CCTNAGG	1 cut(s)	567
BsuRI	GGCC	3 cut(s)	187, 499, 1287
BtgI	CCRYGG	1 cut(s)	1261
BtsCI	GGATG	4 cut(s)	94, 529, 769, 1442
BtsI	GCAGTG	1 cut(s)	369
BtsIMutI	CAGTG	4 cut(s)	369, 479, 1125, 1615
BveI	ACCTGC	1 cut(s)	490
Cac8I	GCNNGC	4 cut(s)	297, 591, 646, 894
CaiI	CAGNNNCTG	1 cut(s)	1415
CfoI	GCGC	1 cut(s)	1329
Cfr13I	GGNCC	7 cut(s)	497, 791, 1071, 1285, 1493, 1547, 1805
CseI	GACGC	1 cut(s)	341
CsiI	ACCWGGT	1 cut(s)	958
Csp6I	GTAC	3 cut(s)	956, 1096, 1520
CviAII	CATG	5 cut(s)	183, 728, 934, 1078, 1568
CviQI	GTAC	3 cut(s)	956, 1096, 1520
DdeI	CTNAG	5 cut(s)	54, 159, 461, 567, 1717
DinI	GGCGCC	1 cut(s)	1328
DpnI	GATC	8 cut(s)	10, 43, 615, 1167, 1238, 1320, 1353, 1648
DpnII	GATC	8 cut(s)	8, 41, 613, 1165, 1236, 1318, 1351, 1646
DraI	TTTAAA	1 cut(s)	1506
DriI	GACNNNNNGTC	1 cut(s)	1000
Eam1104I	CTCTTC	2 cut(s)	1386, 1719
Eam1105I	GACNNNNNGTC	1 cut(s)	1000
EarI	CTCTTC	2 cut(s)	1386, 1719
Eco130I	CCWWGG	1 cut(s)	787
Eco47I	GGWCC	5 cut(s)	791, 1071, 1493, 1547, 1805
Eco57I	CTGAAG	2 cut(s)	230, 1392
Eco81I	CCTNAGG	1 cut(s)	567
Eco88I	CYCGRG	2 cut(s)	1091, 1322
EcoNI	CCTNNNNNAGG	1 cut(s)	248
EcoO109I	RGGNCCY	1 cut(s)	1805
EcoRII	CCWGG	6 cut(s)	499, 636, 648, 793, 958, 1341
EcoT14I	CCWWGG	1 cut(s)	787
EcoT22I	ATGCAT	1 cut(s)	1569
EgeI	GGCGCC	1 cut(s)	1328
EheI	GGCGCC	1 cut(s)	1328
ErhI	CCWWGG	1 cut(s)	787
FaeI	CATG	5 cut(s)	186, 731, 937, 1081, 1571
FalI	AAGNNNNNCTT	2 cut(s)	1359, 1391
FaqI	GGGAC	3 cut(s)	1084, 1264, 1560
FatI	CATG	5 cut(s)	182, 727, 933, 1077, 1567
FauI	CCCGC	1 cut(s)	288
FauNDI	CATATG	3 cut(s)	619, 658, 1084
FblI	GTMKAC	2 cut(s)	478, 1555
Fnu4HI	GCNGC	5 cut(s)	171, 213, 486, 1383, 1413
FokI	GGATG	4 cut(s)	81, 536, 756, 1429
Fsp4HI	GCNGC	5 cut(s)	171, 213, 486, 1383, 1413
FspBI	CTAG	3 cut(s)	68, 144, 1308
GlaI	GCGC	1 cut(s)	1328
GluI	GCNGC	5 cut(s)	171, 213, 486, 1383, 1413
GsaI	CCCAGC	1 cut(s)	1419
GsuI	CTGGAG	4 cut(s)	113, 537, 816, 1635
HaeII	RGCGCY	1 cut(s)	1330
HaeIII	GGCC	3 cut(s)	187, 499, 1287
HapII	CCGG	1 cut(s)	199
HgaI	GACGC	1 cut(s)	341
HhaI	GCGC	1 cut(s)	1329
Hin1I	GRCGYC	1 cut(s)	1327
Hin1II	CATG	5 cut(s)	186, 731, 937, 1081, 1571
Hin6I	GCGC	1 cut(s)	1327
HinP1I	GCGC	1 cut(s)	1327
HincII	GTYRAC	2 cut(s)	985, 1556
HindII	GTYRAC	2 cut(s)	985, 1556
HinfI	GANTC	5 cut(s)	59, 388, 1150, 1439, 1535
HpaI	GTTAAC	1 cut(s)	985
HpaII	CCGG	1 cut(s)	199
HphI	GGTGA	4 cut(s)	980, 989, 1187, 1583
Hpy166II	GTNNAC	4 cut(s)	479, 985, 1493, 1556
Hpy188I	TCNGA	8 cut(s)	55, 160, 249, 387, 1209, 1356, 1632, 1720
Hpy8I	GTNNAC	4 cut(s)	479, 985, 1493, 1556
Hpy99I	CGWCG	2 cut(s)	357, 1560
HpyAV	CCTTC	8 cut(s)	117, 244, 254, 916, 1166, 1340, 1364, 1523
HpyCH4III	ACNGT	9 cut(s)	51, 474, 902, 955, 1016, 1262, 1432, 1490, 1746
HpyCH4IV	ACGT	1 cut(s)	1695
HpyCH4V	TGCA	8 cut(s)	140, 212, 593, 644, 1000, 1385, 1436, 1567
HpyF10VI	GCNNNNNNNGC	4 cut(s)	443, 902, 1412, 1457
HpyF3I	CTNAG	5 cut(s)	54, 159, 461, 567, 1717
HpySE526I	ACGT	1 cut(s)	1695
Hsp92I	GRCGYC	1 cut(s)	1327
Hsp92II	CATG	5 cut(s)	186, 731, 937, 1081, 1571
HspAI	GCGC	1 cut(s)	1327
KasI	GGCGCC	1 cut(s)	1326
KspAI	GTTAAC	1 cut(s)	985
Kzo9I	GATC	8 cut(s)	8, 41, 613, 1165, 1236, 1318, 1351, 1646
LguI	GCTCTTC	1 cut(s)	1386
LmnI	GCTCC	3 cut(s)	562, 1465, 1609
Lsp1109I	GCAGC	5 cut(s)	157, 224, 472, 1369, 1424
LweI	GCATC	3 cut(s)	149, 199, 1554
MabI	ACCWGGT	1 cut(s)	958
MaeI	CTAG	3 cut(s)	68, 144, 1308
MaeII	ACGT	1 cut(s)	1695
MaeIII	GTNAC	1 cut(s)	1571
MalI	GATC	8 cut(s)	10, 43, 615, 1167, 1238, 1320, 1353, 1648
MboI	GATC	8 cut(s)	8, 41, 613, 1165, 1236, 1318, 1351, 1646
MboII	GAAGA	9 cut(s)	102, 230, 251, 949, 1114, 1379, 1403, 1736, 1782
MfeI	CAATTG	1 cut(s)	1386
MflI	RGATCY	3 cut(s)	8, 1351, 1646
MhlI	GDGCHC	2 cut(s)	1462, 1620
MluCI	AATT	6 cut(s)	267, 533, 945, 1300, 1386, 1656
Mly113I	GGCGCC	1 cut(s)	1327
MlyI	GAGTC	2 cut(s)	68, 1448
MmeI	TCCRAC	2 cut(s)	584, 1123
Mph1103I	ATGCAT	1 cut(s)	1569
MroXI	GAANNNNTTC	3 cut(s)	764, 1374, 1405
MseI	TTAA	6 cut(s)	204, 681, 984, 1199, 1271, 1505
MspA1I	CMGCKG	2 cut(s)	295, 1415
MspI	CCGG	1 cut(s)	199
MspR9I	CCNGG	7 cut(s)	199, 501, 638, 650, 795, 960, 1343
MssI	GTTTAAAC	1 cut(s)	1506
MunI	CAATTG	1 cut(s)	1386
Mva1269I	GAATGC	1 cut(s)	332
MvaI	CCWGG	6 cut(s)	501, 638, 650, 795, 960, 1343
MwoI	GCNNNNNNNGC	4 cut(s)	443, 902, 1412, 1457
NarI	GGCGCC	1 cut(s)	1327
NciI	CCSGG	1 cut(s)	199
NdeI	CATATG	3 cut(s)	619, 658, 1084
NdeII	GATC	8 cut(s)	8, 41, 613, 1165, 1236, 1318, 1351, 1646
NlaIII	CATG	5 cut(s)	186, 731, 937, 1081, 1571
NlaIV	GGNNCC	8 cut(s)	498, 634, 904, 1072, 1328, 1426, 1548, 1807
NmuCI	GTSAC	1 cut(s)	1571
NsiI	ATGCAT	1 cut(s)	1569
NspI	RCATGY	1 cut(s)	731
PaeR7I	CTCGAG	1 cut(s)	1091
PciSI	GCTCTTC	1 cut(s)	1386
PctI	GAATGC	1 cut(s)	332
PdmI	GAANNNNTTC	3 cut(s)	764, 1374, 1405
PfeI	GAWTC	3 cut(s)	388, 1150, 1535
PflFI	GACNNNGTC	1 cut(s)	1551
PflMI	CCANNNNNTGG	1 cut(s)	788
PfoI	TCCNGGA	1 cut(s)	1341
PkrI	GCNGC	5 cut(s)	172, 214, 487, 1384, 1414
PleI	GAGTC	2 cut(s)	67, 1447
PluTI	GGCGCC	1 cut(s)	1330
PmeI	GTTTAAAC	1 cut(s)	1506
PpsI	GAGTC	2 cut(s)	67, 1447
PpuMI	RGGWCCY	1 cut(s)	1805
PshBI	ATTAAT	1 cut(s)	204
Psp1406I	AACGTT	1 cut(s)	1695
Psp5II	RGGWCCY	1 cut(s)	1805
Psp6I	CCWGG	6 cut(s)	499, 636, 648, 793, 958, 1341
PspFI	CCCAGC	1 cut(s)	1415
PspGI	CCWGG	6 cut(s)	499, 636, 648, 793, 958, 1341
PspN4I	GGNNCC	8 cut(s)	498, 634, 904, 1072, 1328, 1426, 1548, 1807
PspPI	GGNCC	7 cut(s)	497, 791, 1071, 1285, 1493, 1547, 1805
PspPPI	RGGWCCY	1 cut(s)	1805
PspXI	VCTCGAGB	1 cut(s)	1091
PstNI	CAGNNNCTG	1 cut(s)	1415
PsuI	RGATCY	3 cut(s)	8, 1351, 1646
PsyI	GACNNNGTC	1 cut(s)	1551
PvuII	CAGCTG	1 cut(s)	1415
RsaI	GTAC	3 cut(s)	957, 1097, 1521
RsaNI	GTAC	3 cut(s)	956, 1096, 1520
SalI	GTCGAC	1 cut(s)	1554
SapI	GCTCTTC	1 cut(s)	1386
SaqAI	TTAA	6 cut(s)	204, 681, 984, 1199, 1271, 1505
SatI	GCNGC	5 cut(s)	171, 213, 486, 1383, 1413
Sau3AI	GATC	8 cut(s)	8, 41, 613, 1165, 1236, 1318, 1351, 1646
Sau96I	GGNCC	7 cut(s)	497, 791, 1071, 1285, 1493, 1547, 1805
SchI	GAGTC	2 cut(s)	68, 1448
ScrFI	CCNGG	7 cut(s)	199, 501, 638, 650, 795, 960, 1343
SduI	GDGCHC	2 cut(s)	1462, 1620
SexAI	ACCWGGT	1 cut(s)	958
SfaNI	GCATC	3 cut(s)	149, 199, 1554
SfcI	CTRYAG	1 cut(s)	813
SfoI	GGCGCC	1 cut(s)	1328
Sfr274I	CTCGAG	1 cut(s)	1091
SinI	GGWCC	5 cut(s)	791, 1071, 1493, 1547, 1805
SlaI	CTCGAG	1 cut(s)	1091
SmlI	CTYRAG	4 cut(s)	311, 491, 601, 1091
SmoI	CTYRAG	4 cut(s)	311, 491, 601, 1091
SpeI	ACTAGT	1 cut(s)	1307
Sse9I	AATT	6 cut(s)	267, 533, 945, 1300, 1386, 1656
SsiI	CCGC	3 cut(s)	277, 295, 1708
SspDI	GGCGCC	1 cut(s)	1326
SspI	AATATT	1 cut(s)	861
SspMI	CTAG	3 cut(s)	68, 144, 1308
StyD4I	CCNGG	7 cut(s)	197, 499, 636, 648, 793, 958, 1341
StyI	CCWWGG	1 cut(s)	787
TaaI	ACNGT	9 cut(s)	51, 474, 902, 955, 1016, 1262, 1432, 1490, 1746
TaiI	ACGT	1 cut(s)	1698
TaqI	TCGA	3 cut(s)	688, 1092, 1555
TasI	AATT	6 cut(s)	267, 533, 945, 1300, 1386, 1656
TatI	WGTACW	1 cut(s)	1095
TfiI	GAWTC	3 cut(s)	388, 1150, 1535
Tru1I	TTAA	6 cut(s)	204, 681, 984, 1199, 1271, 1505
Tru9I	TTAA	6 cut(s)	204, 681, 984, 1199, 1271, 1505
TscAI	CASTG	4 cut(s)	376, 479, 1132, 1615
TseFI	GTSAC	1 cut(s)	1571
TseI	GCWGC	5 cut(s)	170, 212, 485, 1382, 1412
Tsp45I	GTSAC	1 cut(s)	1571
TspDTI	ATGAA	7 cut(s)	898, 950, 1119, 1502, 1615, 1649, 1737
TspRI	CASTG	4 cut(s)	376, 479, 1132, 1615
Tth111I	GACNNNGTC	1 cut(s)	1551
Van91I	CCANNNNNTGG	1 cut(s)	788
VpaK11BI	GGWCC	5 cut(s)	791, 1071, 1493, 1547, 1805
VspI	ATTAAT	1 cut(s)	204
XagI	CCTNNNNNAGG	1 cut(s)	248
XapI	RAATTY	2 cut(s)	267, 533
XbaI	TCTAGA	1 cut(s)	67
XceI	RCATGY	1 cut(s)	731
XcmI	CCANNNNNNNNNTGG	3 cut(s)	507, 656, 1299
XhoI	CTCGAG	1 cut(s)	1091
XmiI	GTMKAC	2 cut(s)	478, 1555
XmnI	GAANNNNTTC	3 cut(s)	764, 1374, 1405
XspI	CTAG	3 cut(s)	68, 144, 1308
Zsp2I	ATGCAT	1 cut(s)	1569

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.