Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0009586.1

Orthogroup ID

OG0004924

Physical Location & Seq

Genomic Coordinates Forward (+)

22230 .. 29917

Gene Structure 7688 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0009586.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2169 bp

ctgttggcactgagtgcgcttcagaccggtgccgctgctaccgcagaggctccgaacggcttcggcctcgtccgggcacgccaccgacaccaagcactcggcaagtccgcggttcaggtgccggcaacccgattcccgcgcccgacccgccgggatccgacggtgacaatccaccagcgcgcggtgcagccgatcgcactccacgaatcccctggttccgccggaggccggagtttcgactcggactggaatatgatgcgcgcagaggttgtgccacgtcacctctttgaaaatggcattgctttgagccctccatcacagctccaccattgctgttcagtagagagctacaatatggacagatccagattagatttaagatgttatcattctggatcaatacagtctgaggagtctgctctagacttggaaaggaactactgctgtcatcctaatctcccttcttcaagtccatctcctctccagccatttgcatctagtggtcagcactctgagagcaatgctgcctacttctcatggcctactttgacccggattaatgatgcagcagaagatagggcaaactattttggaaaccttcagaagggtgttcttcctgaaattttggggcggttgccatcaggacagcaggctacaaccttgcttgagctgatgaccatcagggcattccatagcaagatattgcgtcgctttagtcttggcactgccattgggtttcggattcgaaatggtgtcttgacagaaattccagctattcttgtctttgttgcccgtaaagctcacaggcattggctcagccattcacagtgtctacctgctgctcttgaggggccaggaggtgtatggtgtgatgtggatgtagtggaattttcctattttggttctccagctccaactcctaaggagcagctttacacagagcttgcagatggcttgaggggaaatgatccatatgtcggttctggttcccaggttgcaagccaggagacatatggaactatgggtgctattgttaaaagtcgaacaggaaatagacaagttggtttcctcacaaataggcatgtggcagttgatttggactatccaagccagaaaatgttccatcctatgccaccaagccttggacctggagtgtatcttggtgctgtagagagggcaacatcttttatcacagatgacctttggtatggaatatttgccggaacaaacccagaaacatttgtgcgagctgacggtgccttcattccttttgctgacgatttcaacatgaagaatgtaattacaactgtaccaggtgtgggtgagattggtgatgttaacatcatagacttgcagtctccaatcaacagtctcattggtaggcaagtgataaaagttgggagaagttcaggcttgactactgggaccatcatggcatatgccctcgagtacaatgatgaaaaagggatttgtttcttcactgatttttttgttgttggagagaatcagcagacttttgatcttgaaggtgatagtggaagcctcattctattaactggtcagaatggggagaagccacgacctgttggaatcatttggggtgggacagctaaccgtggtcgcttaaaactgaaaaaaggccaaccacctgaaaattggactagtggagttgatcttgggcgccttcttgacctcctggaactggatccgataacaaccgaagaagggcttcaagctgcaattgaagagcaacgaaatgcttcagcagctgggattggttccacagttgcagagtcatcccctgctgtctgtgctccatataaacataagctacaagataactgtggacctcttggtataaacttccgtcaagtaccatttgaaggcgaatcctatctgggaccaagtcgacgattgatgcatggtgattttcacattgaaaatggttttgaaacagctcccagtgttgagcaccagttcattccgagtttcaccagtagatctccggtaattcatagcaatcaagaggaaaatccagtatcaaaaaatgttttagcattgcggagtggttcagatgaagagatttctgtttccttacagttaggagagcctgaaccaaagagaagaaaaaactacaactctttctttagcactaaaggacccaaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

722

Amino Acids

78.72

Weight (kDa)

6.19

Isoelectric Point (pI)

52.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004924)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35155 AT2G35155 AT5G45030 AT5G45030
fragaria_vesca	FvH4_3g12240 FvH4_3g12240 FvH4_3g12240 FvH4_3g12240 FvH4_3g12240 FvH4_3g12240
malus_domestica	MD05G1252600.v1.1 MD10G1233600.v1.1
prunus_persica	Prupe.4G111500_v2.0.a1 Prupe.4G111500_v2.0.a1 Prupe.4G111500_v2.0.a1 Prupe.4G111500_v2.0.a1
pyrus_communis	pycom10g19590
rosa_chinensis	RchiOBHm_Chr5g0020051
rosa_laevigata	RLG00000032494 RLG00000032496
rosa_multiflora	Rmu_sc0002250.1_g000001 Rmu_sc0009586.1_g000004
rosa_roxburghii	Rroxscaffold_1G00058150
rosa_rugosa	Rorug05G0056400 Rorug05G0056500
rosa_samantha	Rh5AG146600 Rh5BG146100 Rh5CG157600 Rh5DG145500
rosa_wichuraiana	Rw5G012940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	844
AccB1I	GGYRCC	4 cut(s)	29, 118, 1256, 1680
AccB7I	CCANNNNNTGG	1 cut(s)	1142
AccI	GTMKAC	2 cut(s)	832, 1909
AccII	CGCG	5 cut(s)	110, 139, 180, 182, 261
AclWI	GGATC	7 cut(s)	149, 162, 357, 403, 962, 1700, 1713
AcsI	RAATTY	3 cut(s)	621, 765, 887
AcuI	CTGAAG	3 cut(s)	5, 584, 1746
AcyI	GRCGYC	1 cut(s)	1681
AdeI	CACNNNGTG	1 cut(s)	14
AfaI	GTAC	3 cut(s)	1311, 1451, 1875
AgeI	ACCGGT	1 cut(s)	26
AgsI	TTSAA	9 cut(s)	290, 468, 1285, 1526, 1733, 1745, 1883, 1940, 1952
AhdI	GACNNNNNGTC	1 cut(s)	1354
AhlI	ACTAGT	1 cut(s)	1661
AjiI	CACGTC	1 cut(s)	278
AjnI	CCWGG	7 cut(s)	211, 853, 990, 1002, 1147, 1312, 1695
Alw21I	GWGCWC	2 cut(s)	1816, 1974
Alw26I	GTCTC	3 cut(s)	1001, 1362, 1376
AlwI	GGATC	7 cut(s)	149, 162, 357, 403, 962, 1700, 1713
AlwNI	CAGNNNCTG	1 cut(s)	1769
Ama87I	CYCGRG	1 cut(s)	1445
AoxI	GGCC	5 cut(s)	64, 226, 539, 851, 1639
ApeKI	GCWGC	8 cut(s)	35, 187, 524, 566, 839, 928, 1736, 1766
ApoI	RAATTY	3 cut(s)	621, 765, 887
AseI	ATTAAT	1 cut(s)	558
AsiGI	ACCGGT	1 cut(s)	26
Asp700I	GAANNNNTTC	4 cut(s)	59, 1118, 1728, 1759
AspLEI	GCGC	7 cut(s)	19, 141, 180, 182, 261, 263, 1683
AspS9I	GGNCC	6 cut(s)	851, 1145, 1425, 1847, 1901, 2159
AsuC2I	CCSGG	3 cut(s)	74, 152, 553
AsuHPI	GGTGA	7 cut(s)	175, 272, 1334, 1343, 1541, 1937, 1984
AsuII	TTCGAA	1 cut(s)	745
AvaI	CYCGRG	1 cut(s)	1445
AvaII	GGWCC	5 cut(s)	1145, 1425, 1847, 1901, 2159
AxyI	CCTNAGG	1 cut(s)	921
BaeGI	GKGCMC	1 cut(s)	79
BaeI	ACNNNNGTAYC	2 cut(s)	1293, 1326
BamHI	GGATCC	2 cut(s)	154, 1705
BanI	GGYRCC	4 cut(s)	29, 118, 1256, 1680
BanII	GRGCYC	1 cut(s)	311
Bbv12I	GWGCWC	2 cut(s)	1816, 1974
BbvI	GCAGC	8 cut(s)	22, 199, 511, 578, 826, 940, 1723, 1778
BccI	CCATC	7 cut(s)	322, 481, 646, 686, 944, 1131, 1436
BceAI	ACGGC	1 cut(s)	73
BciT130I	CCWGG	7 cut(s)	213, 855, 992, 1004, 1149, 1314, 1697
BcnI	CCSGG	3 cut(s)	74, 152, 553
BcoDI	GTCTC	3 cut(s)	1001, 1362, 1376
BcuI	ACTAGT	1 cut(s)	1661
BfaI	CTAG	3 cut(s)	422, 498, 1662
BfmI	CTRYAG	1 cut(s)	1167
BfoI	RGCGCY	1 cut(s)	1684
BfuAI	ACCTGC	1 cut(s)	844
BglII	AGATCT	1 cut(s)	2000
BisI	GCNGC	9 cut(s)	33, 36, 188, 525, 567, 840, 929, 1737, 1767
BlpI	GCTNAGC	1 cut(s)	815
BlsI	GCNGC	9 cut(s)	34, 37, 189, 526, 568, 841, 930, 1738, 1768
Bme18I	GGWCC	5 cut(s)	1145, 1425, 1847, 1901, 2159
BmeRI	GACNNNNNGTC	1 cut(s)	1354
BmeT110I	CYCGRG	1 cut(s)	1445
BmgBI	CACGTC	1 cut(s)	278
BmgT120I	GGNCC	6 cut(s)	851, 1145, 1425, 1847, 1901, 2159
BmrI	ACTGGG	2 cut(s)	1431, 1956
BmsI	GCATC	4 cut(s)	246, 503, 553, 1908
BmuI	ACTGGG	2 cut(s)	1431, 1956
BpmI	CTGGAG	3 cut(s)	467, 891, 1170
Bpu1102I	GCTNAGC	1 cut(s)	815
Bpu14I	TTCGAA	1 cut(s)	745
BpuEI	CTTGAG	3 cut(s)	686, 866, 976
BpuMI	CCSGG	3 cut(s)	74, 152, 553
BsaBI	GATNNNNATC	1 cut(s)	677
BsaHI	GRCGYC	1 cut(s)	1681
BsaJI	CCNNGG	5 cut(s)	108, 211, 990, 1141, 1615
BsaWI	WCCGGW	2 cut(s)	26, 2005
Bse118I	RCCGGY	2 cut(s)	26, 121
Bse1I	ACTGG	8 cut(s)	251, 1426, 1561, 1707, 1962, 1975, 1995, 2036
Bse21I	CCTNAGG	1 cut(s)	921
Bse3DI	GCAATG	4 cut(s)	297, 328, 526, 2057
Bse8I	GATNNNNATC	1 cut(s)	677
BseBI	CCWGG	7 cut(s)	213, 855, 992, 1004, 1149, 1314, 1697
BseDI	CCNNGG	5 cut(s)	108, 211, 990, 1141, 1615
BseGI	GGATG	4 cut(s)	448, 883, 1123, 1796
BseJI	GATNNNNATC	1 cut(s)	677
BseMI	GCAATG	4 cut(s)	297, 328, 526, 2057
BseMII	CTCAG	3 cut(s)	399, 504, 829
BseNI	ACTGG	8 cut(s)	251, 1426, 1561, 1707, 1962, 1975, 1995, 2036
BsePI	GCGCGC	2 cut(s)	178, 259
BseRI	GAGGAG	2 cut(s)	425, 468
BseSI	GKGCMC	1 cut(s)	79
BseXI	GCAGC	8 cut(s)	22, 199, 511, 578, 826, 940, 1723, 1778
BseYI	CCCAGC	1 cut(s)	1769
BsgI	GTGCAG	1 cut(s)	206
Bsh1236I	CGCG	5 cut(s)	110, 139, 180, 182, 261
Bsh1285I	CGRYCG	1 cut(s)	195
BshFI	GGCC	5 cut(s)	66, 228, 541, 853, 1641
BshNI	GGYRCC	4 cut(s)	29, 118, 1256, 1680
BshTI	ACCGGT	1 cut(s)	26
BsiEI	CGRYCG	1 cut(s)	195
BsiHKAI	GWGCWC	2 cut(s)	1816, 1974
BsiHKCI	CYCGRG	1 cut(s)	1445
BsiSI	CCGG	9 cut(s)	27, 73, 122, 151, 222, 229, 553, 1221, 2006
BslFI	GGGAC	3 cut(s)	1438, 1618, 1914
BsmAI	GTCTC	3 cut(s)	1001, 1362, 1376
BsmFI	GGGAC	3 cut(s)	1438, 1618, 1914
BsmI	GAATGC	1 cut(s)	686
BsnI	GGCC	5 cut(s)	66, 228, 541, 853, 1641
BsoBI	CYCGRG	1 cut(s)	1445
Bsp119I	TTCGAA	1 cut(s)	745
Bsp1286I	GDGCHC	4 cut(s)	79, 311, 1816, 1974
Bsp143I	GATC	9 cut(s)	154, 192, 362, 395, 967, 1519, 1672, 1705, 2000
Bsp1720I	GCTNAGC	1 cut(s)	815
BspANI	GGCC	5 cut(s)	66, 228, 541, 853, 1641
BspCNI	CTCAG	3 cut(s)	400, 505, 828
BspFNI	CGCG	5 cut(s)	110, 139, 180, 182, 261
BspMI	ACCTGC	1 cut(s)	844
BspPI	GGATC	7 cut(s)	149, 162, 357, 403, 962, 1700, 1713
BspQI	GCTCTTC	1 cut(s)	1740
BspT104I	TTCGAA	1 cut(s)	745
BspT107I	GGYRCC	4 cut(s)	29, 118, 1256, 1680
BsrDI	GCAATG	4 cut(s)	297, 328, 526, 2057
BsrFI	RCCGGY	2 cut(s)	26, 121
BsrI	ACTGG	8 cut(s)	251, 1426, 1561, 1707, 1962, 1975, 1995, 2036
BssAI	RCCGGY	2 cut(s)	26, 121
BssECI	CCNNGG	5 cut(s)	108, 211, 990, 1141, 1615
BssHII	GCGCGC	2 cut(s)	178, 259
BssMI	GATC	9 cut(s)	154, 192, 362, 395, 967, 1519, 1672, 1705, 2000
BssNI	GRCGYC	1 cut(s)	1681
BssT1I	CCWWGG	1 cut(s)	1141
Bst2UI	CCWGG	7 cut(s)	213, 855, 992, 1004, 1149, 1314, 1697
Bst6I	CTCTTC	2 cut(s)	1740, 2073
BstACI	GRCGYC	1 cut(s)	1681
BstAPI	GCANNNNNTGC	1 cut(s)	14
BstBI	TTCGAA	1 cut(s)	745
BstC8I	GCNNGC	8 cut(s)	79, 123, 180, 261, 651, 945, 1000, 1248
BstDEI	CTNAG	5 cut(s)	11, 408, 513, 815, 921
BstDSI	CCRYGG	2 cut(s)	108, 1615
BstENI	CCTNNNNNAGG	1 cut(s)	602
BstF5I	GGATG	4 cut(s)	448, 883, 1123, 1796
BstFNI	CGCG	5 cut(s)	110, 139, 180, 182, 261
BstH2I	RGCGCY	1 cut(s)	1684
BstHHI	GCGC	7 cut(s)	19, 141, 180, 182, 261, 263, 1683
BstKTI	GATC	9 cut(s)	157, 195, 365, 398, 970, 1522, 1675, 1708, 2003
BstMAI	GTCTC	3 cut(s)	1001, 1362, 1376
BstMBI	GATC	9 cut(s)	154, 192, 362, 395, 967, 1519, 1672, 1705, 2000
BstMCI	CGRYCG	1 cut(s)	195
BstMWI	GCNNNNNNNGC	8 cut(s)	14, 41, 147, 184, 797, 1256, 1766, 1811
BstNI	CCWGG	7 cut(s)	213, 855, 992, 1004, 1149, 1314, 1697
BstNSI	RCATGY	1 cut(s)	1085
BstSFI	CTRYAG	1 cut(s)	1167
BstSLI	GKGCMC	1 cut(s)	79
BstUI	CGCG	5 cut(s)	110, 139, 180, 182, 261
BstV1I	GCAGC	8 cut(s)	22, 199, 511, 578, 826, 940, 1723, 1778
BstX2I	RGATCY	4 cut(s)	154, 362, 1705, 2000
BstYI	RGATCY	4 cut(s)	154, 362, 1705, 2000
Bsu36I	CCTNAGG	1 cut(s)	921
BsuRI	GGCC	5 cut(s)	66, 228, 541, 853, 1641
BtgI	CCRYGG	2 cut(s)	108, 1615
BtrI	CACGTC	1 cut(s)	278
BtsCI	GGATG	4 cut(s)	448, 883, 1123, 1796
BtsI	GCAGTG	1 cut(s)	723
BtsIMutI	CAGTG	5 cut(s)	8, 723, 833, 1479, 1969
BveI	ACCTGC	1 cut(s)	844
Cac8I	GCNNGC	8 cut(s)	79, 123, 180, 261, 651, 945, 1000, 1248
CaiI	CAGNNNCTG	1 cut(s)	1769
CfoI	GCGC	7 cut(s)	19, 141, 180, 182, 261, 263, 1683
Cfr10I	RCCGGY	2 cut(s)	26, 121
Cfr13I	GGNCC	6 cut(s)	851, 1145, 1425, 1847, 1901, 2159
Cfr42I	CCGCGG	1 cut(s)	111
CseI	GACGC	1 cut(s)	695
CsiI	ACCWGGT	1 cut(s)	1312
Csp6I	GTAC	3 cut(s)	1310, 1450, 1874
CspAI	ACCGGT	1 cut(s)	26
CviAII	CATG	5 cut(s)	537, 1082, 1288, 1432, 1922
CviQI	GTAC	3 cut(s)	1310, 1450, 1874
DdeI	CTNAG	5 cut(s)	11, 408, 513, 815, 921
DinI	GGCGCC	1 cut(s)	1682
DpnI	GATC	9 cut(s)	156, 194, 364, 397, 969, 1521, 1674, 1707, 2002
DpnII	GATC	9 cut(s)	154, 192, 362, 395, 967, 1519, 1672, 1705, 2000
DraIII	CACNNNGTG	1 cut(s)	14
DriI	GACNNNNNGTC	1 cut(s)	1354
Eam1104I	CTCTTC	2 cut(s)	1740, 2073
Eam1105I	GACNNNNNGTC	1 cut(s)	1354
EarI	CTCTTC	2 cut(s)	1740, 2073
EciI	GGCGGA	1 cut(s)	208
Eco130I	CCWWGG	1 cut(s)	1141
Eco24I	GRGCYC	1 cut(s)	311
Eco47I	GGWCC	5 cut(s)	1145, 1425, 1847, 1901, 2159
Eco57I	CTGAAG	3 cut(s)	5, 584, 1746
Eco81I	CCTNAGG	1 cut(s)	921
Eco88I	CYCGRG	1 cut(s)	1445
EcoNI	CCTNNNNNAGG	1 cut(s)	602
EcoO109I	RGGNCCY	1 cut(s)	2159
EcoRII	CCWGG	7 cut(s)	211, 853, 990, 1002, 1147, 1312, 1695
EcoT14I	CCWWGG	1 cut(s)	1141
EcoT22I	ATGCAT	1 cut(s)	1923
EcoT38I	GRGCYC	1 cut(s)	311
EgeI	GGCGCC	1 cut(s)	1682
EheI	GGCGCC	1 cut(s)	1682
ErhI	CCWWGG	1 cut(s)	1141
FaeI	CATG	5 cut(s)	540, 1085, 1291, 1435, 1925
FalI	AAGNNNNNCTT	2 cut(s)	1713, 1745
FaqI	GGGAC	3 cut(s)	1438, 1618, 1914
FatI	CATG	5 cut(s)	536, 1081, 1287, 1431, 1921
FauI	CCCGC	2 cut(s)	144, 155
FauNDI	CATATG	3 cut(s)	973, 1012, 1438
FblI	GTMKAC	2 cut(s)	832, 1909
Fnu4HI	GCNGC	9 cut(s)	33, 36, 188, 525, 567, 840, 929, 1737, 1767
FokI	GGATG	4 cut(s)	435, 890, 1110, 1783
FriOI	GRGCYC	1 cut(s)	311
Fsp4HI	GCNGC	9 cut(s)	33, 36, 188, 525, 567, 840, 929, 1737, 1767
FspBI	CTAG	3 cut(s)	422, 498, 1662
GlaI	GCGC	7 cut(s)	18, 140, 179, 181, 260, 262, 1682
GluI	GCNGC	9 cut(s)	33, 36, 188, 525, 567, 840, 929, 1737, 1767
GsaI	CCCAGC	1 cut(s)	1773
GsuI	CTGGAG	3 cut(s)	467, 891, 1170
HaeII	RGCGCY	1 cut(s)	1684
HaeIII	GGCC	5 cut(s)	66, 228, 541, 853, 1641
HapII	CCGG	9 cut(s)	27, 73, 122, 151, 222, 229, 553, 1221, 2006
HgaI	GACGC	1 cut(s)	695
HhaI	GCGC	7 cut(s)	19, 141, 180, 182, 261, 263, 1683
Hin1I	GRCGYC	1 cut(s)	1681
Hin1II	CATG	5 cut(s)	540, 1085, 1291, 1435, 1925
Hin6I	GCGC	7 cut(s)	17, 139, 178, 180, 259, 261, 1681
HinP1I	GCGC	7 cut(s)	17, 139, 178, 180, 259, 261, 1681
HincII	GTYRAC	2 cut(s)	1339, 1910
HindII	GTYRAC	2 cut(s)	1339, 1910
HinfI	GANTC	9 cut(s)	132, 206, 239, 413, 742, 1504, 1590, 1793, 1889
HpaI	GTTAAC	1 cut(s)	1339
HpaII	CCGG	9 cut(s)	27, 73, 122, 151, 222, 229, 553, 1221, 2006
HphI	GGTGA	7 cut(s)	175, 272, 1334, 1343, 1541, 1937, 1984
Hpy166II	GTNNAC	4 cut(s)	833, 1339, 1847, 1910
Hpy8I	GTNNAC	4 cut(s)	833, 1339, 1847, 1910
Hpy99I	CGWCG	3 cut(s)	163, 711, 1914
HpyAV	CCTTC	8 cut(s)	471, 598, 608, 1270, 1520, 1694, 1718, 1877
HpyCH4IV	ACGT	1 cut(s)	277
HpyCH4V	TGCA	9 cut(s)	187, 494, 566, 947, 998, 1354, 1739, 1790, 1921
HpyF10VI	GCNNNNNNNGC	8 cut(s)	14, 41, 147, 184, 797, 1256, 1766, 1811
HpyF3I	CTNAG	5 cut(s)	11, 408, 513, 815, 921
HpySE526I	ACGT	1 cut(s)	277
Hsp92I	GRCGYC	1 cut(s)	1681
Hsp92II	CATG	5 cut(s)	540, 1085, 1291, 1435, 1925
HspAI	GCGC	7 cut(s)	17, 139, 178, 180, 259, 261, 1681
KasI	GGCGCC	1 cut(s)	1680
KroI	GCCGGC	1 cut(s)	121
KroNI	GCCGGC	1 cut(s)	123
KspAI	GTTAAC	1 cut(s)	1339
KspI	CCGCGG	1 cut(s)	111
Kzo9I	GATC	9 cut(s)	154, 192, 362, 395, 967, 1519, 1672, 1705, 2000
LguI	GCTCTTC	1 cut(s)	1740
LmnI	GCTCC	6 cut(s)	55, 327, 916, 925, 1819, 1963
Lsp1109I	GCAGC	8 cut(s)	22, 199, 511, 578, 826, 940, 1723, 1778
LweI	GCATC	4 cut(s)	246, 503, 553, 1908
MabI	ACCWGGT	1 cut(s)	1312
MaeI	CTAG	3 cut(s)	422, 498, 1662
MaeII	ACGT	1 cut(s)	277
MaeIII	GTNAC	2 cut(s)	163, 278
MalI	GATC	9 cut(s)	156, 194, 364, 397, 969, 1521, 1674, 1707, 2002
MboI	GATC	9 cut(s)	154, 192, 362, 395, 967, 1519, 1672, 1705, 2000
MboII	GAAGA	9 cut(s)	456, 584, 605, 1303, 1468, 1733, 1757, 2090, 2136
MfeI	CAATTG	1 cut(s)	1740
MflI	RGATCY	4 cut(s)	154, 362, 1705, 2000
MhlI	GDGCHC	4 cut(s)	79, 311, 1816, 1974
MluCI	AATT	7 cut(s)	621, 765, 887, 1299, 1654, 1740, 2010
Mly113I	GGCGCC	1 cut(s)	1681
MlyI	GAGTC	3 cut(s)	233, 422, 1802
MmeI	TCCRAC	4 cut(s)	182, 938, 1477, 1567
Mph1103I	ATGCAT	1 cut(s)	1923
MroNI	GCCGGC	1 cut(s)	121
MroXI	GAANNNNTTC	4 cut(s)	59, 1118, 1728, 1759
MseI	TTAA	6 cut(s)	377, 558, 1035, 1338, 1553, 1625
MspA1I	CMGCKG	3 cut(s)	35, 110, 1769
MspI	CCGG	9 cut(s)	27, 73, 122, 151, 222, 229, 553, 1221, 2006
MunI	CAATTG	1 cut(s)	1740
Mva1269I	GAATGC	1 cut(s)	686
MvaI	CCWGG	7 cut(s)	213, 855, 992, 1004, 1149, 1314, 1697
MvnI	CGCG	5 cut(s)	110, 139, 180, 182, 261
MwoI	GCNNNNNNNGC	8 cut(s)	14, 41, 147, 184, 797, 1256, 1766, 1811
NaeI	GCCGGC	1 cut(s)	123
NarI	GGCGCC	1 cut(s)	1681
NciI	CCSGG	3 cut(s)	74, 152, 553
NdeI	CATATG	3 cut(s)	973, 1012, 1438
NdeII	GATC	9 cut(s)	154, 192, 362, 395, 967, 1519, 1672, 1705, 2000
NgoMIV	GCCGGC	1 cut(s)	121
NlaIII	CATG	5 cut(s)	540, 1085, 1291, 1435, 1925
NmeAIII	GCCGAG	1 cut(s)	78
NmuCI	GTSAC	2 cut(s)	163, 278
NsiI	ATGCAT	1 cut(s)	1923
NspI	RCATGY	1 cut(s)	1085
NspV	TTCGAA	1 cut(s)	745
PaeR7I	CTCGAG	1 cut(s)	1445
PauI	GCGCGC	2 cut(s)	178, 259
PciSI	GCTCTTC	1 cut(s)	1740
PcsI	WCGNNNNNNNCGW	1 cut(s)	201
PctI	GAATGC	1 cut(s)	686
PdiI	GCCGGC	1 cut(s)	123
PdmI	GAANNNNTTC	4 cut(s)	59, 1118, 1728, 1759
PfeI	GAWTC	6 cut(s)	132, 206, 742, 1504, 1590, 1889
PflFI	GACNNNGTC	1 cut(s)	1905
PflMI	CCANNNNNTGG	1 cut(s)	1142
PfoI	TCCNGGA	1 cut(s)	1695
PinAI	ACCGGT	1 cut(s)	26
PkrI	GCNGC	9 cut(s)	34, 37, 189, 526, 568, 841, 930, 1738, 1768
Ple19I	CGATCG	1 cut(s)	195
PleI	GAGTC	3 cut(s)	233, 421, 1801
PluTI	GGCGCC	1 cut(s)	1684
PpsI	GAGTC	3 cut(s)	233, 421, 1801
PpuMI	RGGWCCY	1 cut(s)	2159
PshBI	ATTAAT	1 cut(s)	558
Psp5II	RGGWCCY	1 cut(s)	2159
Psp6I	CCWGG	7 cut(s)	211, 853, 990, 1002, 1147, 1312, 1695
PspFI	CCCAGC	1 cut(s)	1769
PspGI	CCWGG	7 cut(s)	211, 853, 990, 1002, 1147, 1312, 1695
PspPI	GGNCC	6 cut(s)	851, 1145, 1425, 1847, 1901, 2159
PspPPI	RGGWCCY	1 cut(s)	2159
PspXI	VCTCGAGB	1 cut(s)	1445
PstNI	CAGNNNCTG	1 cut(s)	1769
PsuI	RGATCY	4 cut(s)	154, 362, 1705, 2000
PsyI	GACNNNGTC	1 cut(s)	1905
PteI	GCGCGC	2 cut(s)	178, 259
PvuI	CGATCG	1 cut(s)	195
PvuII	CAGCTG	1 cut(s)	1769
RsaI	GTAC	3 cut(s)	1311, 1451, 1875
RsaNI	GTAC	3 cut(s)	1310, 1450, 1874
SacII	CCGCGG	1 cut(s)	111
SalI	GTCGAC	1 cut(s)	1908
SapI	GCTCTTC	1 cut(s)	1740
SaqAI	TTAA	6 cut(s)	377, 558, 1035, 1338, 1553, 1625
SatI	GCNGC	9 cut(s)	33, 36, 188, 525, 567, 840, 929, 1737, 1767
Sau3AI	GATC	9 cut(s)	154, 192, 362, 395, 967, 1519, 1672, 1705, 2000
Sau96I	GGNCC	6 cut(s)	851, 1145, 1425, 1847, 1901, 2159
SchI	GAGTC	3 cut(s)	233, 422, 1802
SduI	GDGCHC	4 cut(s)	79, 311, 1816, 1974
SexAI	ACCWGGT	1 cut(s)	1312
SfaNI	GCATC	4 cut(s)	246, 503, 553, 1908
SfcI	CTRYAG	1 cut(s)	1167
SfoI	GGCGCC	1 cut(s)	1682
Sfr274I	CTCGAG	1 cut(s)	1445
Sfr303I	CCGCGG	1 cut(s)	111
SfuI	TTCGAA	1 cut(s)	745
SgrBI	CCGCGG	1 cut(s)	111
SinI	GGWCC	5 cut(s)	1145, 1425, 1847, 1901, 2159
SlaI	CTCGAG	1 cut(s)	1445
SmlI	CTYRAG	4 cut(s)	665, 845, 955, 1445
SmoI	CTYRAG	4 cut(s)	665, 845, 955, 1445
SpeI	ACTAGT	1 cut(s)	1661
Sse9I	AATT	7 cut(s)	621, 765, 887, 1299, 1654, 1740, 2010
SspDI	GGCGCC	1 cut(s)	1680
SspI	AATATT	1 cut(s)	1215
SspMI	CTAG	3 cut(s)	422, 498, 1662
StyI	CCWWGG	1 cut(s)	1141
TaiI	ACGT	1 cut(s)	280
TaqI	TCGA	5 cut(s)	237, 745, 1042, 1446, 1909
TasI	AATT	7 cut(s)	621, 765, 887, 1299, 1654, 1740, 2010
TatI	WGTACW	1 cut(s)	1449
TauI	GCSGC	1 cut(s)	35
TfiI	GAWTC	6 cut(s)	132, 206, 742, 1504, 1590, 1889
Tru1I	TTAA	6 cut(s)	377, 558, 1035, 1338, 1553, 1625
Tru9I	TTAA	6 cut(s)	377, 558, 1035, 1338, 1553, 1625
TscAI	CASTG	5 cut(s)	15, 730, 833, 1486, 1969
TseFI	GTSAC	2 cut(s)	163, 278
TseI	GCWGC	8 cut(s)	35, 187, 524, 566, 839, 928, 1736, 1766
Tsp45I	GTSAC	2 cut(s)	163, 278
TspDTI	ATGAA	6 cut(s)	1252, 1304, 1473, 1969, 2003, 2091
TspGWI	ACGGA	1 cut(s)	1856
TspRI	CASTG	5 cut(s)	15, 730, 833, 1486, 1969
Tth111I	GACNNNGTC	1 cut(s)	1905
Van91I	CCANNNNNTGG	1 cut(s)	1142
VpaK11BI	GGWCC	5 cut(s)	1145, 1425, 1847, 1901, 2159
VspI	ATTAAT	1 cut(s)	558
XagI	CCTNNNNNAGG	1 cut(s)	602
XapI	RAATTY	3 cut(s)	621, 765, 887
XbaI	TCTAGA	1 cut(s)	421
XceI	RCATGY	1 cut(s)	1085
XcmI	CCANNNNNNNNNTGG	4 cut(s)	209, 861, 1010, 1653
XhoI	CTCGAG	1 cut(s)	1445
XmiI	GTMKAC	2 cut(s)	832, 1909
XmnI	GAANNNNTTC	4 cut(s)	59, 1118, 1728, 1759
XspI	CTAG	3 cut(s)	422, 498, 1662
Zsp2I	ATGCAT	1 cut(s)	1923

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.