Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002283.1

Orthogroup ID

OG0012255

Physical Location & Seq

Genomic Coordinates Reverse (-)

200476 .. 204989

Gene Structure 4514 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2094 bp

atgccgcaaaccgatcccgccgccggtgagcaccatcaccaccaccttgcaccttcatcgcatcctgataccgcccctccaccttgccaaaaagcaagcaaagtctacacccagttgacgaccgcatccagatctaaaaccataacagaaacagatcccaacagggatcccatctgccgcaatttgaccgcatctgccataactccaatcgcctgccccagaaccgccttcgctcccgatccaagagggacagatcgagatctatcggcccaacccgaggtcgagaacccaccctcctcccctgaaccacgtctctgccttgaggacccgtcactaaccatcaacgacatcccctcctgggtcggaaaacaacggcggtatcgccggtggcgttcggcagggagagaacgagcaaactccgagtttaccttttcttcttcgcgtgtggggtgcgttccctcctccgacaatactatgtaccgcgacgaagacggggagccattgatgaaccccgacgacttcgatcgcgagccgtcgccggagccgcttctccacgacgatttggaggacgaagacaccggcgattggcgcgaccgggagcggtcccagacgccggtgtacgaccccgacgcgtcgtccaaatccaggccgaggaagcggctggtgaagaagggcggcggcggcgagagtcagaaggtggtggtgttgagagaaggggaggagtggccggacgataagtttcatgagttgatgccggatagtgatgaggaggaacagagcagggccaagaggttgaagaaggagaagaggcataagggggagaagaggggggtgagattgccggggaaatcgtcttctgataaggccgaggtcaaggagatgtgggacacccttacccgcggcgattctgaggatgataatgagggtcaaaggaatttggatgatgacaactttatagatgacactggcgctgaagagggtgaggaaaatgaaattgatgagctttttaaggtgggtaagaaaaagaagaagaatgaaaaaagtccagcagaaatagcaatggtagtggagaatatcatggctgagctcgaggttacagctgaagaggatgcagaccttaacagacaggggaaacctgccattaataaactcaagaaagtttctcttctcacagaggtcctctcaaagaagcagcttcaacaagagttcttggatcatggagtgctaactctactcaagaattggcttgaacctcttccagatggaagtttaccaaatataaacattcgagcagcgatattgaagattttgactgattaccctcttgatctagagcagtatgatagaagagaacaactgaagcgaagtggccttggaaaggtcattatgtttttgtcaaaatctgatgaagaaacaacttccaacagaaaacttgcaaaggaattggttgacaaatggagtcgacctttattcaataaaagtacaaggtttgaggatatgagaaatattgatgaggagagagttccctttagaaggccatcagtgaaaaagccagcgagcagtggttcaggaatggagtctagagatggtgatcttgacttggatgagttttcaagggaaagaaaatctggccaatcatcttctcggcaacttacttcaaggccagaagcgacgcaaatggattttctggtgcgcccacaatctaagattgatcctgatgaaattagagctcgcggtaagcaagcaatacaggatcagcggcgtatgaagatgaacaaaaagttgcaacagttgaaggcaccaaagaagaagcagcttcaagccacaaagctaagtgtggagggtcgtggtatggtcaaatacttgttacggttaaatggcctgggttgtgggcttgcttttcttgcttggtcaaacaggctctatttggagttcctaatccagaatcttggttttgttgttacttgtactgttgcaatattctattgcattatcaaaagctttctttcagaagccgcagtttacagtaaagctttttatggtgatccaaacacagatatgaaagaattttggaacatcactaatggcaactag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000414 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0010793 GO:0019219 GO:0019222 GO:0031056 GO:0031060 GO:0031323 GO:0031326 GO:0031399 GO:0031974 GO:0031981 GO:0032239 GO:0032268 GO:0032386 GO:0032784 GO:0032879 GO:0032880 GO:0033043 GO:0033044 GO:0033157 GO:0035065 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046822 GO:0046825 GO:0046831 GO:0050684 GO:0050789 GO:0050794 GO:0051049 GO:0051128 GO:0051171 GO:0051223 GO:0051246 GO:0051252 GO:0060255 GO:0060341 GO:0065007 GO:0070013 GO:0070201 GO:0080090 GO:0090087 GO:0090239 GO:1901983 GO:1902275 GO:1903311 GO:1903506 GO:1903827 GO:2000112 GO:2000197 GO:2000756 GO:2001141 GO:2001253

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Med26

Protein Analysis

697

Amino Acids

79.21

Weight (kDa)

6.01

Isoelectric Point (pI)

55.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Med26	PF08711	450 - 490	3.5e-12	TFIIS helical bundle-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012255)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32130 AT1G32130
fragaria_vesca	FvH4_5g23250
malus_domestica	MD06G1038400.v1.1 MD16G1270500.v1.1
prunus_persica	Prupe.5G026700_v2.0.a1 Prupe.5G026700_v2.0.a1
pyrus_communis	pycom06g03210 pycom16g23940
rosa_chinensis	RchiOBHm_Chr7g0212171
rosa_laevigata	RLG00000002920
rosa_multiflora	Rmu_sc0002283.1_g000053
rosa_roxburghii	Rroxscaffold_3G00247050
rosa_rugosa	Rorug07G0131800 Rorug07G0131900
rosa_samantha	Rh7AG264700 Rh7CG281200 Rh7DG271100
rosa_wichuraiana	Rw7G022600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1144
AccB1I	GGYRCC	1 cut(s)	1798
AccBSI	CCGCTC	1 cut(s)	601
AccI	GTMKAC	2 cut(s)	105, 1462
AccII	CGCG	7 cut(s)	442, 483, 528, 591, 632, 900, 1734
AclWI	GGATC	9 cut(s)	8, 149, 161, 174, 233, 1221, 1706, 1761, 2039
AcoI	YGGCCR	2 cut(s)	725, 1630
AcsI	RAATTY	2 cut(s)	934, 2066
AcuI	CTGAAG	3 cut(s)	993, 1122, 1379
AcyI	GRCGYC	1 cut(s)	611
AfaI	GTAC	4 cut(s)	479, 620, 1483, 1969
AfiI	CCNNNNNNNGG	9 cut(s)	23, 277, 358, 585, 613, 645, 651, 1378, 1533
AflIII	ACRYGT	1 cut(s)	630
AgsI	TTSAA	9 cut(s)	796, 1199, 1250, 1303, 1474, 1614, 1659, 1795, 1820
AhdI	GACNNNNNGTC	1 cut(s)	634
AjiI	CACGTC	1 cut(s)	311
AjnI	CCWGG	3 cut(s)	356, 644, 1881
AloI	GAACNNNNNNTCC	2 cut(s)	278, 310
AluBI	AGCT	9 cut(s)	1003, 1087, 1100, 1195, 1730, 1816, 1831, 2001, 2033
AluI	AGCT	9 cut(s)	1003, 1087, 1100, 1195, 1730, 1816, 1831, 2001, 2033
Alw21I	GWGCWC	3 cut(s)	33, 1089, 1732
Alw26I	GTCTC	1 cut(s)	317
AlwI	GGATC	9 cut(s)	8, 149, 161, 174, 233, 1221, 1706, 1761, 2039
Ama87I	CYCGRG	2 cut(s)	275, 1088
ApeKI	GCWGC	3 cut(s)	1192, 1292, 1813
ApoI	RAATTY	2 cut(s)	934, 2066
AseI	ATTAAT	1 cut(s)	1143
Asp700I	GAANNNNTTC	1 cut(s)	1254
AspLEI	GCGC	3 cut(s)	591, 971, 1695
AspS9I	GGNCC	5 cut(s)	268, 325, 603, 783, 1177
AsuC2I	CCSGG	2 cut(s)	596, 843
AsuHPI	GGTGA	7 cut(s)	29, 38, 676, 844, 992, 1601, 2054
AvaI	CYCGRG	2 cut(s)	275, 1088
AvaII	GGWCC	3 cut(s)	325, 603, 1177
BaeI	ACNNNNGTAYC	2 cut(s)	362, 395
BalI	TGGCCA	1 cut(s)	1632
BamHI	GGATCC	1 cut(s)	166
BanI	GGYRCC	1 cut(s)	1798
BanII	GRGCYC	2 cut(s)	1089, 1732
BbsI	GAAGAC	3 cut(s)	495, 579, 846
Bbv12I	GWGCWC	3 cut(s)	33, 1089, 1732
BbvI	GCAGC	3 cut(s)	1204, 1304, 1825
BccI	CCATC	6 cut(s)	42, 179, 347, 1256, 1546, 1580
BceAI	ACGGC	2 cut(s)	389, 517
BcgI	CGANNNNNNTGC	2 cut(s)	39, 73
BciT130I	CCWGG	3 cut(s)	358, 646, 1883
BcnI	CCSGG	2 cut(s)	596, 843
BcoDI	GTCTC	1 cut(s)	317
BfaI	CTAG	3 cut(s)	1331, 1581, 2092
BfoI	RGCGCY	1 cut(s)	972
BfuAI	ACCTGC	1 cut(s)	1144
BglII	AGATCT	2 cut(s)	131, 259
BlpI	GCTNAGC	1 cut(s)	1083
Bme1390I	CCNGG	5 cut(s)	358, 596, 646, 843, 1883
Bme18I	GGWCC	3 cut(s)	325, 603, 1177
BmeRI	GACNNNNNGTC	1 cut(s)	634
BmeT110I	CYCGRG	2 cut(s)	275, 1088
BmgBI	CACGTC	1 cut(s)	311
BmgT120I	GGNCC	5 cut(s)	268, 325, 603, 783, 1177
BmiI	GGNNCC	6 cut(s)	168, 327, 498, 543, 605, 1800
BmrFI	CCNGG	5 cut(s)	358, 596, 646, 843, 1883
BmrI	ACTGGG	1 cut(s)	106
BmsI	GCATC	5 cut(s)	70, 134, 200, 741, 1099
BmuI	ACTGGG	1 cut(s)	106
BpiI	GAAGAC	3 cut(s)	495, 579, 846
BplI	GAGNNNNNCTC	2 cut(s)	1166, 1198
Bpu1102I	GCTNAGC	1 cut(s)	1083
BpuEI	CTTGAG	3 cut(s)	341, 1136, 1220
BpuMI	CCSGG	2 cut(s)	596, 843
BsaBI	GATNNNNATC	2 cut(s)	258, 1590
BsaHI	GRCGYC	1 cut(s)	611
BsaJI	CCNNGG	8 cut(s)	276, 357, 650, 842, 867, 898, 1372, 1882
BsaXI	ACNNNNNCTCC	6 cut(s)	61, 91, 278, 308, 338, 368
Bsc4I	CCNNNNNNNGG	9 cut(s)	23, 277, 358, 585, 613, 645, 651, 1378, 1533
Bse118I	RCCGGY	4 cut(s)	23, 384, 578, 613
Bse1I	ACTGG	2 cut(s)	112, 970
Bse3DI	GCAATG	1 cut(s)	1065
Bse8I	GATNNNNATC	2 cut(s)	258, 1590
BseBI	CCWGG	3 cut(s)	358, 646, 1883
BseDI	CCNNGG	8 cut(s)	276, 357, 650, 842, 867, 898, 1372, 1882
BseGI	GGATG	7 cut(s)	61, 125, 348, 919, 946, 1114, 1609
BseJI	GATNNNNATC	2 cut(s)	258, 1590
BseLI	CCNNNNNNNGG	9 cut(s)	23, 277, 358, 585, 613, 645, 651, 1378, 1533
BseMI	GCAATG	1 cut(s)	1065
BseMII	CTCAG	2 cut(s)	900, 1074
BseNI	ACTGG	2 cut(s)	112, 970
BseRI	GAGGAG	5 cut(s)	286, 451, 734, 782, 1529
BseXI	GCAGC	3 cut(s)	1204, 1304, 1825
Bsh1236I	CGCG	7 cut(s)	442, 483, 528, 591, 632, 900, 1734
Bsh1285I	CGRYCG	3 cut(s)	123, 526, 595
BshNI	GGYRCC	1 cut(s)	1798
BsiEI	CGRYCG	3 cut(s)	123, 526, 595
BsiHKAI	GWGCWC	3 cut(s)	33, 1089, 1732
BsiHKCI	CYCGRG	2 cut(s)	275, 1088
BsiSI	CCGG	9 cut(s)	24, 385, 539, 579, 595, 614, 728, 755, 842
BslFI	GGGAC	3 cut(s)	262, 589, 899
BslI	CCNNNNNNNGG	9 cut(s)	23, 277, 358, 585, 613, 645, 651, 1378, 1533
BsmAI	GTCTC	1 cut(s)	317
BsmBI	CGTCTC	1 cut(s)	317
BsmFI	GGGAC	3 cut(s)	262, 589, 899
BsoBI	CYCGRG	2 cut(s)	275, 1088
Bsp1286I	GDGCHC	3 cut(s)	33, 1089, 1732
Bsp1720I	GCTNAGC	1 cut(s)	1083
Bsp68I	TCGCGA	1 cut(s)	528
BspCNI	CTCAG	2 cut(s)	901, 1075
BspFNI	CGCG	7 cut(s)	442, 483, 528, 591, 632, 900, 1734
BspHI	TCATGA	1 cut(s)	742
BspLI	GGNNCC	6 cut(s)	168, 327, 498, 543, 605, 1800
BspMI	ACCTGC	1 cut(s)	1144
BspPI	GGATC	9 cut(s)	8, 149, 161, 174, 233, 1221, 1706, 1761, 2039
BspT107I	GGYRCC	1 cut(s)	1798
BsrBI	CCGCTC	1 cut(s)	601
BsrDI	GCAATG	1 cut(s)	1065
BsrFI	RCCGGY	4 cut(s)	23, 384, 578, 613
BsrI	ACTGG	2 cut(s)	112, 970
BssAI	RCCGGY	4 cut(s)	23, 384, 578, 613
BssECI	CCNNGG	8 cut(s)	276, 357, 650, 842, 867, 898, 1372, 1882
BssNI	GRCGYC	1 cut(s)	611
BssT1I	CCWWGG	1 cut(s)	1372
Bst2UI	CCWGG	3 cut(s)	358, 646, 1883
Bst4CI	ACNGT	4 cut(s)	1791, 1872, 1972, 2027
Bst6I	CTCTTC	7 cut(s)	800, 818, 969, 1098, 1170, 1260, 1342
BstACI	GRCGYC	1 cut(s)	611
BstC8I	GCNNGC	8 cut(s)	97, 214, 530, 1554, 1558, 1732, 1743, 1896
BstDEI	CTNAG	4 cut(s)	909, 1083, 1704, 1832
BstDSI	CCRYGG	1 cut(s)	898
BstENI	CCTNNNNNAGG	2 cut(s)	1376, 1531
BstF5I	GGATG	7 cut(s)	61, 125, 348, 919, 946, 1114, 1609
BstFNI	CGCG	7 cut(s)	442, 483, 528, 591, 632, 900, 1734
BstH2I	RGCGCY	1 cut(s)	972
BstHHI	GCGC	3 cut(s)	591, 971, 1695
BstMAI	GTCTC	1 cut(s)	317
BstMCI	CGRYCG	3 cut(s)	123, 526, 595
BstMWI	GCNNNNNNNGC	6 cut(s)	544, 588, 655, 681, 1055, 1904
BstNI	CCWGG	3 cut(s)	358, 646, 1883
BstSCI	CCNGG	5 cut(s)	356, 594, 644, 841, 1881
BstUI	CGCG	7 cut(s)	442, 483, 528, 591, 632, 900, 1734
BstV1I	GCAGC	3 cut(s)	1204, 1304, 1825
BstV2I	GAAGAC	3 cut(s)	495, 579, 846
BstX2I	RGATCY	4 cut(s)	131, 154, 166, 259
BstXI	CCANNNNNNTGG	1 cut(s)	1949
BstYI	RGATCY	4 cut(s)	131, 154, 166, 259
BtgI	CCRYGG	1 cut(s)	898
BtgZI	GCGATG	1 cut(s)	42
BtrI	CACGTC	1 cut(s)	311
BtsCI	GGATG	7 cut(s)	61, 125, 348, 919, 946, 1114, 1609
BtsI	GCAGTG	1 cut(s)	1567
BtsIMutI	CAGTG	3 cut(s)	963, 1548, 1567
BtuMI	TCGCGA	1 cut(s)	528
BveI	ACCTGC	1 cut(s)	1144
Cac8I	GCNNGC	8 cut(s)	97, 214, 530, 1554, 1558, 1732, 1743, 1896
CciI	TCATGA	1 cut(s)	742
CfoI	GCGC	3 cut(s)	591, 971, 1695
Cfr10I	RCCGGY	4 cut(s)	23, 384, 578, 613
Cfr13I	GGNCC	5 cut(s)	268, 325, 603, 783, 1177
Cfr42I	CCGCGG	1 cut(s)	901
CseI	GACGC	4 cut(s)	619, 621, 638, 1681
Csp6I	GTAC	4 cut(s)	478, 619, 1482, 1968
CspCI	CAANNNNNGTGG	2 cut(s)	1047, 1082
CviAII	CATG	3 cut(s)	743, 1078, 1217
CviQI	GTAC	4 cut(s)	478, 619, 1482, 1968
DdeI	CTNAG	4 cut(s)	909, 1083, 1704, 1832
DriI	GACNNNNNGTC	1 cut(s)	634
EaeI	YGGCCR	2 cut(s)	725, 1630
Eam1104I	CTCTTC	7 cut(s)	800, 818, 969, 1098, 1170, 1260, 1342
Eam1105I	GACNNNNNGTC	1 cut(s)	634
EarI	CTCTTC	7 cut(s)	800, 818, 969, 1098, 1170, 1260, 1342
Ecl136II	GAGCTC	2 cut(s)	1087, 1730
Eco130I	CCWWGG	1 cut(s)	1372
Eco24I	GRGCYC	2 cut(s)	1089, 1732
Eco47I	GGWCC	3 cut(s)	325, 603, 1177
Eco53kI	GAGCTC	2 cut(s)	1087, 1730
Eco57I	CTGAAG	3 cut(s)	993, 1122, 1379
Eco88I	CYCGRG	2 cut(s)	275, 1088
EcoICRI	GAGCTC	2 cut(s)	1087, 1730
EcoNI	CCTNNNNNAGG	2 cut(s)	1376, 1531
EcoO109I	RGGNCCY	2 cut(s)	325, 1177
EcoRII	CCWGG	3 cut(s)	356, 644, 1881
EcoT14I	CCWWGG	1 cut(s)	1372
EcoT38I	GRGCYC	2 cut(s)	1089, 1732
ErhI	CCWWGG	1 cut(s)	1372
Esp3I	CGTCTC	1 cut(s)	317
FaeI	CATG	3 cut(s)	746, 1081, 1220
FalI	AAGNNNNNCTT	2 cut(s)	1149, 1181
FaqI	GGGAC	3 cut(s)	262, 589, 899
FatI	CATG	3 cut(s)	742, 1077, 1216
FauI	CCCGC	2 cut(s)	25, 905
FblI	GTMKAC	2 cut(s)	105, 1462
FokI	GGATG	7 cut(s)	48, 112, 335, 926, 953, 1121, 1616
FriOI	GRGCYC	2 cut(s)	1089, 1732
FspBI	CTAG	3 cut(s)	1331, 1581, 2092
GlaI	GCGC	3 cut(s)	590, 970, 1694
HaeII	RGCGCY	1 cut(s)	972
HapII	CCGG	9 cut(s)	24, 385, 539, 579, 595, 614, 728, 755, 842
HgaI	GACGC	4 cut(s)	619, 621, 638, 1681
HhaI	GCGC	3 cut(s)	591, 971, 1695
Hin1I	GRCGYC	1 cut(s)	611
Hin1II	CATG	3 cut(s)	746, 1081, 1220
Hin6I	GCGC	3 cut(s)	589, 969, 1693
HinP1I	GCGC	3 cut(s)	589, 969, 1693
HincII	GTYRAC	3 cut(s)	117, 1450, 1463
HindII	GTYRAC	3 cut(s)	117, 1450, 1463
HindIII	AAGCTT	2 cut(s)	1999, 2031
HinfI	GANTC	5 cut(s)	688, 905, 1459, 1577, 1945
HpaII	CCGG	9 cut(s)	24, 385, 539, 579, 595, 614, 728, 755, 842
HphI	GGTGA	7 cut(s)	29, 38, 676, 844, 992, 1601, 2054
Hpy166II	GTNNAC	8 cut(s)	106, 117, 426, 619, 1271, 1450, 1463, 2023
Hpy188I	TCNGA	8 cut(s)	365, 421, 466, 693, 859, 910, 1405, 2011
Hpy8I	GTNNAC	8 cut(s)	106, 117, 426, 619, 1271, 1450, 1463, 2023
Hpy99I	CGWCG	7 cut(s)	488, 518, 538, 560, 632, 637, 1675
HpyAV	CCTTC	8 cut(s)	63, 238, 664, 688, 707, 793, 1527, 1789
HpyCH4III	ACNGT	4 cut(s)	1791, 1872, 1972, 2027
HpyCH4IV	ACGT	1 cut(s)	310
HpyCH4V	TGCA	6 cut(s)	50, 1112, 1436, 1786, 1976, 1989
HpyF10VI	GCNNNNNNNGC	6 cut(s)	544, 588, 655, 681, 1055, 1904
HpyF3I	CTNAG	4 cut(s)	909, 1083, 1704, 1832
HpySE526I	ACGT	1 cut(s)	310
Hsp92I	GRCGYC	1 cut(s)	611
Hsp92II	CATG	3 cut(s)	746, 1081, 1220
HspAI	GCGC	3 cut(s)	589, 969, 1693
KspI	CCGCGG	1 cut(s)	901
LmnI	GCTCC	4 cut(s)	238, 496, 541, 598
Lsp1109I	GCAGC	3 cut(s)	1204, 1304, 1825
LweI	GCATC	5 cut(s)	70, 134, 200, 741, 1099
MaeI	CTAG	3 cut(s)	1331, 1581, 2092
MaeII	ACGT	1 cut(s)	310
MaeIII	GTNAC	4 cut(s)	330, 1093, 1866, 1960
MbiI	CCGCTC	1 cut(s)	601
MflI	RGATCY	4 cut(s)	131, 154, 166, 259
MhlI	GDGCHC	3 cut(s)	33, 1089, 1732
MlsI	TGGCCA	1 cut(s)	1632
MluCI	AATT	7 cut(s)	181, 934, 993, 1240, 1442, 1722, 2066
MluI	ACGCGT	1 cut(s)	630
MluNI	TGGCCA	1 cut(s)	1632
MlyI	GAGTC	3 cut(s)	697, 1468, 1586
MmeI	TCCRAC	3 cut(s)	343, 489, 1446
Mox20I	TGGCCA	1 cut(s)	1632
MroXI	GAANNNNTTC	1 cut(s)	1254
MscI	TGGCCA	1 cut(s)	1632
MseI	TTAA	4 cut(s)	1008, 1119, 1143, 1874
MslI	CAYNNNNRTG	1 cut(s)	2057
Msp20I	TGGCCA	1 cut(s)	1632
MspA1I	CMGCKG	3 cut(s)	900, 1100, 1759
MspI	CCGG	9 cut(s)	24, 385, 539, 579, 595, 614, 728, 755, 842
MspR9I	CCNGG	5 cut(s)	358, 596, 646, 843, 1883
MvaI	CCWGG	3 cut(s)	358, 646, 1883
MvnI	CGCG	7 cut(s)	442, 483, 528, 591, 632, 900, 1734
MwoI	GCNNNNNNNGC	6 cut(s)	544, 588, 655, 681, 1055, 1904
NciI	CCSGG	2 cut(s)	596, 843
NlaIII	CATG	3 cut(s)	746, 1081, 1220
NlaIV	GGNNCC	6 cut(s)	168, 327, 498, 543, 605, 1800
NmeAIII	GCCGAG	3 cut(s)	675, 892, 1624
NmuCI	GTSAC	1 cut(s)	330
NruI	TCGCGA	1 cut(s)	528
PaeR7I	CTCGAG	1 cut(s)	1088
PagI	TCATGA	1 cut(s)	742
PcsI	WCGNNNNNNNCGW	1 cut(s)	388
PdmI	GAANNNNTTC	1 cut(s)	1254
PfeI	GAWTC	2 cut(s)	905, 1945
Ple19I	CGATCG	1 cut(s)	526
PleI	GAGTC	3 cut(s)	696, 1467, 1585
PpsI	GAGTC	3 cut(s)	696, 1467, 1585
PpuMI	RGGWCCY	2 cut(s)	325, 1177
PshBI	ATTAAT	1 cut(s)	1143
Psp124BI	GAGCTC	2 cut(s)	1089, 1732
Psp5II	RGGWCCY	2 cut(s)	325, 1177
Psp6I	CCWGG	3 cut(s)	356, 644, 1881
PspGI	CCWGG	3 cut(s)	356, 644, 1881
PspN4I	GGNNCC	6 cut(s)	168, 327, 498, 543, 605, 1800
PspPI	GGNCC	5 cut(s)	268, 325, 603, 783, 1177
PspPPI	RGGWCCY	2 cut(s)	325, 1177
PspXI	VCTCGAGB	1 cut(s)	1088
PsuI	RGATCY	4 cut(s)	131, 154, 166, 259
PvuI	CGATCG	1 cut(s)	526
PvuII	CAGCTG	1 cut(s)	1100
RruI	TCGCGA	1 cut(s)	528
RsaI	GTAC	4 cut(s)	479, 620, 1483, 1969
RsaNI	GTAC	4 cut(s)	478, 619, 1482, 1968
RseI	CAYNNNNRTG	1 cut(s)	2057
SacI	GAGCTC	2 cut(s)	1089, 1732
SacII	CCGCGG	1 cut(s)	901
SalI	GTCGAC	1 cut(s)	1461
SaqAI	TTAA	4 cut(s)	1008, 1119, 1143, 1874
Sau96I	GGNCC	5 cut(s)	268, 325, 603, 783, 1177
SchI	GAGTC	3 cut(s)	697, 1468, 1586
ScrFI	CCNGG	5 cut(s)	358, 596, 646, 843, 1883
SduI	GDGCHC	3 cut(s)	33, 1089, 1732
SfaNI	GCATC	5 cut(s)	70, 134, 200, 741, 1099
Sfr274I	CTCGAG	1 cut(s)	1088
Sfr303I	CCGCGG	1 cut(s)	901
SgrAI	CRCCGGYG	4 cut(s)	23, 384, 578, 613
SgrBI	CCGCGG	1 cut(s)	901
SinI	GGWCC	3 cut(s)	325, 603, 1177
SlaI	CTCGAG	1 cut(s)	1088
SmiMI	CAYNNNNRTG	1 cut(s)	2057
SmlI	CTYRAG	4 cut(s)	320, 1088, 1151, 1235
SmoI	CTYRAG	4 cut(s)	320, 1088, 1151, 1235
Sse9I	AATT	7 cut(s)	181, 934, 993, 1240, 1442, 1722, 2066
SspI	AATATT	2 cut(s)	1507, 1980
SspMI	CTAG	3 cut(s)	1331, 1581, 2092
SstI	GAGCTC	2 cut(s)	1089, 1732
StyD4I	CCNGG	5 cut(s)	356, 594, 644, 841, 1881
StyI	CCWWGG	1 cut(s)	1372
TaaI	ACNGT	4 cut(s)	1791, 1872, 1972, 2027
TaiI	ACGT	1 cut(s)	313
TaqI	TCGA	6 cut(s)	256, 282, 522, 1089, 1288, 1462
TasI	AATT	7 cut(s)	181, 934, 993, 1240, 1442, 1722, 2066
TatI	WGTACW	2 cut(s)	1481, 1967
TfiI	GAWTC	2 cut(s)	905, 1945
Tru1I	TTAA	4 cut(s)	1008, 1119, 1143, 1874
Tru9I	TTAA	4 cut(s)	1008, 1119, 1143, 1874
TscAI	CASTG	3 cut(s)	970, 1548, 1567
TseFI	GTSAC	1 cut(s)	330
TseI	GCWGC	3 cut(s)	1192, 1292, 1813
Tsp45I	GTSAC	1 cut(s)	330
TspRI	CASTG	3 cut(s)	970, 1548, 1567
VpaK11BI	GGWCC	3 cut(s)	325, 603, 1177
VspI	ATTAAT	1 cut(s)	1143
XagI	CCTNNNNNAGG	2 cut(s)	1376, 1531
XapI	RAATTY	2 cut(s)	934, 2066
XbaI	TCTAGA	2 cut(s)	1330, 1580
XhoI	CTCGAG	1 cut(s)	1088
XmiI	GTMKAC	2 cut(s)	105, 1462
XmnI	GAANNNNTTC	1 cut(s)	1254
XspI	CTAG	3 cut(s)	1331, 1581, 2092

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.