Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0012255

Physical Location & Seq

Genomic Coordinates Forward (+)

40387753 .. 40391561

Gene Structure 3809 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00247050.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1467 bp

ATGGCTTACGAAGACGATCCGTACCGCGACGAAGACGGGGAGCCATTGATGAACCCCGACGACTTCGATCGCGAGCCGTCCCCGGAGCCGCTTCTCCACGATGATTTGGAGGACGAAGACACCGGCGATTCGCGCGACCGGGAGCGGTCCCAGACGCCGGTCTACGACCCCGACGCGTCGTCCAAATCCAGGCCGAGGAAGCGGCTGGTGAAGAAGGGCGGCGGCGGCGAGAGTCAGAAGGTGGTGGTGTTGAGAGAAGGGGAGGAGTGGCCGGACGATAAGTTTCATGAGTTGATGCCGGATAGTGATGAGGAGGAACAGAGCAGGGCCAAGAGGATGAAGAAGGAGAAGAGGCATAAGGGGGAGAAGAGGAGATTGCCCGGGAAATCTTCTTCTGATAAGGCTGAGGTCAAGGAGATGTGGGACACCCTTACCCGCGGCGATTCTGAGGATGATAATGAGGGTCAAAGGAATGTGGATGATGACAACTTTATAGATGACACTGGCGTACATCCTTCTGATCGGTATGCAAGTGACAATGACCGTTCTCCCAGTCATCATCCGCAGGCTGAAGAGGGTGAGGAAAATGAAATTGATGAGCTTTTTAAGGTGGGTAAGAAAAAGAAGAAGAATGAAAAAAGTCCAGCAGAAATAGCAATGGTAGTGGAGAATATCATGGCTGAGCTCGAGGTTACAGCTGAAGAGGATGCAGACCTTAACAGACAGGGGAAACCTGCCATTAATAAACTCAAGAAAGTTTCTCTTCTCACAGAGGTCCTCTCAAAGAAGCAGCTTCAACAAGAGTTCTTGGATCATGGAGTGCTAACTCTACTCAAGAATTGGCTTGAACCTCTTCCAGATGGAAGTTTACCAAATATAAACATTCGAGCAGCGATATTGAAGATTTTGACTGATTACCCTCTTGATCTAGAGCAGTATGATAGAAGAGAACAACTGAAGCGAAGTGGCCTTGGAAAGGTCATTATGTTTTTGTCAAAATCTGATGAAGAAACAACTTCCAACAGAAAACTTGCAAAGGAATTGGTAGACAAATGGAGTCGACCTTTATTCAATAAAAGTACAAGGTTTGAGGATATGAGAAATATTGATGAGGAGAGAGTTCCCTTTAGAAGGCCATCAGTGAAAAAGCCAGCGAGCAGTGGTTCAGGAATGGAGTCTAGAGATGGTGATCTTGACTTGGATGAGTTTTCAAGGGAAAGAAAATCTGGCCAATCATCTTCTCGGCAACTTACTTCAAGGCCAGAAGCGACGCAAATGGATTTTCTGGTGCGCCCACAATCTAAGATTGATCCTGATGAAATTAGAGCTCGCGGTAAGCAAGCAATACAGGATCAGCGGCGTATGAAGATGAACAAAAAGTTGCAACAGTTGAAGGCGCCAAAGAAGAAGCAGCTTCAAGCCACAAAGCTAAGTGTGGAGGGTCGTGGTATGGTCAAATACTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000414 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0010793 GO:0019219 GO:0019222 GO:0031056 GO:0031060 GO:0031323 GO:0031326 GO:0031399 GO:0031974 GO:0031981 GO:0032239 GO:0032268 GO:0032386 GO:0032784 GO:0032879 GO:0032880 GO:0033043 GO:0033044 GO:0033157 GO:0035065 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046822 GO:0046825 GO:0046831 GO:0050684 GO:0050789 GO:0050794 GO:0051049 GO:0051128 GO:0051171 GO:0051223 GO:0051246 GO:0051252 GO:0060255 GO:0060341 GO:0065007 GO:0070013 GO:0070201 GO:0080090 GO:0090087 GO:0090239 GO:1901983 GO:1902275 GO:1903311 GO:1903506 GO:1903827 GO:2000112 GO:2000197 GO:2000756 GO:2001141 GO:2001253

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Med26

Protein Analysis

488

Amino Acids

56.14

Weight (kDa)

5.46

Isoelectric Point (pI)

61.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Med26	PF08711	316 - 356	2.2e-12	TFIIS helical bundle-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0012255)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32130 AT1G32130
fragaria_vesca	FvH4_5g23250
malus_domestica	MD06G1038400.v1.1 MD16G1270500.v1.1
prunus_persica	Prupe.5G026700_v2.0.a1 Prupe.5G026700_v2.0.a1
pyrus_communis	pycom06g03210 pycom16g23940
rosa_chinensis	RchiOBHm_Chr7g0212171
rosa_laevigata	RLG00000002920
rosa_multiflora	Rmu_sc0002283.1_g000053
rosa_roxburghii	Rroxscaffold_3G00247050
rosa_rugosa	Rorug07G0131800 Rorug07G0131900
rosa_samantha	Rh7AG264700 Rh7CG281200 Rh7DG271100
rosa_wichuraiana	Rw7G022600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	742
AccB1I	GGYRCC	1 cut(s)	1396
AccBSI	CCGCTC	1 cut(s)	145
AccI	GTMKAC	3 cut(s)	162, 1047, 1060
AccII	CGCG	7 cut(s)	27, 72, 133, 135, 176, 438, 1332
AclWI	GGATC	4 cut(s)	11, 819, 1304, 1359
AcoI	YGGCCR	2 cut(s)	269, 1228
AcuI	CTGAAG	3 cut(s)	591, 720, 977
AcyI	GRCGYC	2 cut(s)	155, 1397
AfaI	GTAC	3 cut(s)	23, 510, 1081
AfiI	CCNNNNNNNGG	5 cut(s)	157, 189, 195, 976, 1131
AflIII	ACRYGT	1 cut(s)	174
AgsI	TTSAA	8 cut(s)	797, 848, 901, 1072, 1212, 1257, 1393, 1418
AhdI	GACNNNNNGTC	1 cut(s)	178
AjnI	CCWGG	1 cut(s)	188
AluBI	AGCT	7 cut(s)	601, 685, 698, 793, 1328, 1414, 1429
AluI	AGCT	7 cut(s)	601, 685, 698, 793, 1328, 1414, 1429
Alw21I	GWGCWC	2 cut(s)	687, 1330
AlwI	GGATC	4 cut(s)	11, 819, 1304, 1359
Ama87I	CYCGRG	2 cut(s)	380, 686
AoxI	GGCC	7 cut(s)	191, 269, 327, 967, 1133, 1228, 1259
ApeKI	GCWGC	3 cut(s)	790, 890, 1411
AseI	ATTAAT	1 cut(s)	741
Asp700I	GAANNNNTTC	1 cut(s)	852
AspLEI	GCGC	3 cut(s)	135, 1293, 1399
AspS9I	GGNCC	3 cut(s)	147, 327, 775
AsuC2I	CCSGG	4 cut(s)	83, 140, 381, 382
AsuHPI	GGTGA	3 cut(s)	220, 590, 1199
AvaI	CYCGRG	2 cut(s)	380, 686
AvaII	GGWCC	2 cut(s)	147, 775
BalI	TGGCCA	1 cut(s)	1230
BanI	GGYRCC	1 cut(s)	1396
BanII	GRGCYC	2 cut(s)	687, 1330
BbsI	GAAGAC	3 cut(s)	18, 39, 123
Bbv12I	GWGCWC	2 cut(s)	687, 1330
BbvCI	CCTCAGC	1 cut(s)	405
BbvI	GCAGC	3 cut(s)	802, 902, 1423
BccI	CCATC	3 cut(s)	854, 1144, 1178
BceAI	ACGGC	1 cut(s)	61
BciT130I	CCWGG	1 cut(s)	190
BcnI	CCSGG	4 cut(s)	83, 140, 381, 382
BfaI	CTAG	2 cut(s)	929, 1179
BfoI	RGCGCY	1 cut(s)	1400
BfuAI	ACCTGC	1 cut(s)	742
BlpI	GCTNAGC	1 cut(s)	681
Bme1390I	CCNGG	5 cut(s)	83, 140, 190, 381, 382
Bme18I	GGWCC	2 cut(s)	147, 775
BmeRI	GACNNNNNGTC	1 cut(s)	178
BmeT110I	CYCGRG	2 cut(s)	380, 686
BmgT120I	GGNCC	3 cut(s)	147, 327, 775
BmiI	GGNNCC	4 cut(s)	42, 87, 149, 1398
BmrFI	CCNGG	5 cut(s)	83, 140, 190, 381, 382
BmrI	ACTGGG	1 cut(s)	546
BmsI	GCATC	2 cut(s)	285, 697
BmuI	ACTGGG	1 cut(s)	546
BoxI	GACNNNNGTC	1 cut(s)	158
BpiI	GAAGAC	3 cut(s)	18, 39, 123
BplI	GAGNNNNNCTC	2 cut(s)	764, 796
Bpu10I	CCTNAGC	1 cut(s)	405
Bpu1102I	GCTNAGC	1 cut(s)	681
BpuEI	CTTGAG	2 cut(s)	734, 818
BpuMI	CCSGG	4 cut(s)	83, 140, 381, 382
BsaBI	GATNNNNATC	1 cut(s)	1188
BsaHI	GRCGYC	2 cut(s)	155, 1397
BsaJI	CCNNGG	5 cut(s)	81, 194, 380, 436, 970
Bsc4I	CCNNNNNNNGG	5 cut(s)	157, 189, 195, 976, 1131
Bse118I	RCCGGY	2 cut(s)	122, 157
Bse1I	ACTGG	2 cut(s)	508, 552
Bse3DI	GCAATG	1 cut(s)	663
Bse8I	GATNNNNATC	1 cut(s)	1188
BseBI	CCWGG	1 cut(s)	190
BseDI	CCNNGG	5 cut(s)	81, 194, 380, 436, 970
BseGI	GGATG	7 cut(s)	342, 457, 484, 511, 559, 712, 1207
BseJI	GATNNNNATC	1 cut(s)	1188
BseLI	CCNNNNNNNGG	5 cut(s)	157, 189, 195, 976, 1131
BseMI	GCAATG	1 cut(s)	663
BseMII	CTCAG	3 cut(s)	396, 438, 672
BseNI	ACTGG	2 cut(s)	508, 552
BseRI	GAGGAG	4 cut(s)	278, 326, 385, 1127
BseXI	GCAGC	3 cut(s)	802, 902, 1423
Bsh1236I	CGCG	7 cut(s)	27, 72, 133, 135, 176, 438, 1332
Bsh1285I	CGRYCG	2 cut(s)	70, 139
BshFI	GGCC	7 cut(s)	193, 271, 329, 969, 1135, 1230, 1261
BshNI	GGYRCC	1 cut(s)	1396
BsiEI	CGRYCG	2 cut(s)	70, 139
BsiHKAI	GWGCWC	2 cut(s)	687, 1330
BsiHKCI	CYCGRG	2 cut(s)	380, 686
BsiSI	CCGG	7 cut(s)	83, 123, 139, 158, 272, 299, 381
BslFI	GGGAC	3 cut(s)	64, 133, 437
BslI	CCNNNNNNNGG	5 cut(s)	157, 189, 195, 976, 1131
BsmFI	GGGAC	3 cut(s)	64, 133, 437
BsnI	GGCC	7 cut(s)	193, 271, 329, 969, 1135, 1230, 1261
BsoBI	CYCGRG	2 cut(s)	380, 686
Bsp1286I	GDGCHC	2 cut(s)	687, 1330
Bsp143I	GATC	8 cut(s)	16, 67, 520, 811, 925, 1189, 1309, 1351
Bsp1720I	GCTNAGC	1 cut(s)	681
Bsp68I	TCGCGA	1 cut(s)	72
BspANI	GGCC	7 cut(s)	193, 271, 329, 969, 1135, 1230, 1261
BspCNI	CTCAG	3 cut(s)	397, 439, 673
BspFNI	CGCG	7 cut(s)	27, 72, 133, 135, 176, 438, 1332
BspHI	TCATGA	1 cut(s)	286
BspLI	GGNNCC	4 cut(s)	42, 87, 149, 1398
BspMI	ACCTGC	1 cut(s)	742
BspPI	GGATC	4 cut(s)	11, 819, 1304, 1359
BspT107I	GGYRCC	1 cut(s)	1396
BsrBI	CCGCTC	1 cut(s)	145
BsrDI	GCAATG	1 cut(s)	663
BsrFI	RCCGGY	2 cut(s)	122, 157
BsrI	ACTGG	2 cut(s)	508, 552
BssAI	RCCGGY	2 cut(s)	122, 157
BssECI	CCNNGG	5 cut(s)	81, 194, 380, 436, 970
BssMI	GATC	8 cut(s)	16, 67, 520, 811, 925, 1189, 1309, 1351
BssNI	GRCGYC	2 cut(s)	155, 1397
BssT1I	CCWWGG	1 cut(s)	970
Bst2UI	CCWGG	1 cut(s)	190
Bst4CI	ACNGT	2 cut(s)	545, 1389
Bst6I	CTCTTC	7 cut(s)	344, 362, 567, 696, 768, 858, 940
BstACI	GRCGYC	2 cut(s)	155, 1397
BstC8I	GCNNGC	6 cut(s)	74, 567, 1152, 1156, 1330, 1341
BstDEI	CTNAG	5 cut(s)	405, 447, 681, 1302, 1430
BstDSI	CCRYGG	1 cut(s)	436
BstENI	CCTNNNNNAGG	2 cut(s)	974, 1129
BstF5I	GGATG	7 cut(s)	342, 457, 484, 511, 559, 712, 1207
BstFNI	CGCG	7 cut(s)	27, 72, 133, 135, 176, 438, 1332
BstH2I	RGCGCY	1 cut(s)	1400
BstHHI	GCGC	3 cut(s)	135, 1293, 1399
BstKTI	GATC	8 cut(s)	19, 70, 523, 814, 928, 1192, 1312, 1354
BstMBI	GATC	8 cut(s)	16, 67, 520, 811, 925, 1189, 1309, 1351
BstMCI	CGRYCG	2 cut(s)	70, 139
BstMWI	GCNNNNNNNGC	4 cut(s)	132, 199, 225, 653
BstNI	CCWGG	1 cut(s)	190
BstPAI	GACNNNNGTC	1 cut(s)	158
BstSCI	CCNGG	5 cut(s)	81, 138, 188, 379, 380
BstUI	CGCG	7 cut(s)	27, 72, 133, 135, 176, 438, 1332
BstV1I	GCAGC	3 cut(s)	802, 902, 1423
BstV2I	GAAGAC	3 cut(s)	18, 39, 123
BsuRI	GGCC	7 cut(s)	193, 271, 329, 969, 1135, 1230, 1261
BtgI	CCRYGG	1 cut(s)	436
BtsCI	GGATG	7 cut(s)	342, 457, 484, 511, 559, 712, 1207
BtsI	GCAGTG	1 cut(s)	1165
BtsIMutI	CAGTG	3 cut(s)	501, 1146, 1165
BtuMI	TCGCGA	1 cut(s)	72
BveI	ACCTGC	1 cut(s)	742
Cac8I	GCNNGC	6 cut(s)	74, 567, 1152, 1156, 1330, 1341
CciI	TCATGA	1 cut(s)	286
CfoI	GCGC	3 cut(s)	135, 1293, 1399
Cfr10I	RCCGGY	2 cut(s)	122, 157
Cfr13I	GGNCC	3 cut(s)	147, 327, 775
Cfr42I	CCGCGG	1 cut(s)	439
Cfr9I	CCCGGG	1 cut(s)	380
CseI	GACGC	4 cut(s)	163, 165, 182, 1279
Csp6I	GTAC	3 cut(s)	22, 509, 1080
CspCI	CAANNNNNGTGG	2 cut(s)	645, 680
CviAII	CATG	3 cut(s)	287, 676, 815
CviQI	GTAC	3 cut(s)	22, 509, 1080
DdeI	CTNAG	5 cut(s)	405, 447, 681, 1302, 1430
DinI	GGCGCC	1 cut(s)	1398
DpnI	GATC	8 cut(s)	18, 69, 522, 813, 927, 1191, 1311, 1353
DpnII	GATC	8 cut(s)	16, 67, 520, 811, 925, 1189, 1309, 1351
DriI	GACNNNNNGTC	1 cut(s)	178
EaeI	YGGCCR	2 cut(s)	269, 1228
Eam1104I	CTCTTC	7 cut(s)	344, 362, 567, 696, 768, 858, 940
Eam1105I	GACNNNNNGTC	1 cut(s)	178
EarI	CTCTTC	7 cut(s)	344, 362, 567, 696, 768, 858, 940
Ecl136II	GAGCTC	2 cut(s)	685, 1328
Eco130I	CCWWGG	1 cut(s)	970
Eco24I	GRGCYC	2 cut(s)	687, 1330
Eco47I	GGWCC	2 cut(s)	147, 775
Eco53kI	GAGCTC	2 cut(s)	685, 1328
Eco57I	CTGAAG	3 cut(s)	591, 720, 977
Eco88I	CYCGRG	2 cut(s)	380, 686
EcoICRI	GAGCTC	2 cut(s)	685, 1328
EcoNI	CCTNNNNNAGG	2 cut(s)	974, 1129
EcoO109I	RGGNCCY	1 cut(s)	775
EcoRII	CCWGG	1 cut(s)	188
EcoT14I	CCWWGG	1 cut(s)	970
EcoT38I	GRGCYC	2 cut(s)	687, 1330
EgeI	GGCGCC	1 cut(s)	1398
EheI	GGCGCC	1 cut(s)	1398
ErhI	CCWWGG	1 cut(s)	970
FaeI	CATG	3 cut(s)	290, 679, 818
FalI	AAGNNNNNCTT	2 cut(s)	747, 779
FaqI	GGGAC	3 cut(s)	64, 133, 437
FatI	CATG	3 cut(s)	286, 675, 814
FauI	CCCGC	1 cut(s)	443
FblI	GTMKAC	3 cut(s)	162, 1047, 1060
FokI	GGATG	7 cut(s)	349, 464, 491, 498, 546, 719, 1214
FriOI	GRGCYC	2 cut(s)	687, 1330
FspBI	CTAG	2 cut(s)	929, 1179
GlaI	GCGC	3 cut(s)	134, 1292, 1398
HaeII	RGCGCY	1 cut(s)	1400
HaeIII	GGCC	7 cut(s)	193, 271, 329, 969, 1135, 1230, 1261
HapII	CCGG	7 cut(s)	83, 123, 139, 158, 272, 299, 381
HgaI	GACGC	4 cut(s)	163, 165, 182, 1279
HhaI	GCGC	3 cut(s)	135, 1293, 1399
Hin1I	GRCGYC	2 cut(s)	155, 1397
Hin1II	CATG	3 cut(s)	290, 679, 818
Hin6I	GCGC	3 cut(s)	133, 1291, 1397
HinP1I	GCGC	3 cut(s)	133, 1291, 1397
HincII	GTYRAC	1 cut(s)	1061
HindII	GTYRAC	1 cut(s)	1061
HinfI	GANTC	5 cut(s)	128, 232, 443, 1057, 1175
HpaII	CCGG	7 cut(s)	83, 123, 139, 158, 272, 299, 381
HphI	GGTGA	3 cut(s)	220, 590, 1199
Hpy166II	GTNNAC	4 cut(s)	163, 869, 1048, 1061
Hpy188I	TCNGA	5 cut(s)	237, 397, 448, 520, 1003
Hpy8I	GTNNAC	4 cut(s)	163, 869, 1048, 1061
Hpy99I	CGWCG	5 cut(s)	32, 62, 176, 181, 1273
HpyAV	CCTTC	7 cut(s)	208, 232, 251, 337, 525, 1125, 1387
HpyCH4III	ACNGT	2 cut(s)	545, 1389
HpyCH4V	TGCA	4 cut(s)	530, 710, 1034, 1384
HpyF10VI	GCNNNNNNNGC	4 cut(s)	132, 199, 225, 653
HpyF3I	CTNAG	5 cut(s)	405, 447, 681, 1302, 1430
Hsp92I	GRCGYC	2 cut(s)	155, 1397
Hsp92II	CATG	3 cut(s)	290, 679, 818
HspAI	GCGC	3 cut(s)	133, 1291, 1397
KasI	GGCGCC	1 cut(s)	1396
KspI	CCGCGG	1 cut(s)	439
Kzo9I	GATC	8 cut(s)	16, 67, 520, 811, 925, 1189, 1309, 1351
LmnI	GCTCC	3 cut(s)	40, 85, 142
Lsp1109I	GCAGC	3 cut(s)	802, 902, 1423
LweI	GCATC	2 cut(s)	285, 697
MaeI	CTAG	2 cut(s)	929, 1179
MaeIII	GTNAC	2 cut(s)	533, 691
MalI	GATC	8 cut(s)	18, 69, 522, 813, 927, 1191, 1311, 1353
MbiI	CCGCTC	1 cut(s)	145
MboI	GATC	8 cut(s)	16, 67, 520, 811, 925, 1189, 1309, 1351
MhlI	GDGCHC	2 cut(s)	687, 1330
MlsI	TGGCCA	1 cut(s)	1230
MluCI	AATT	4 cut(s)	591, 838, 1040, 1320
MluI	ACGCGT	1 cut(s)	174
MluNI	TGGCCA	1 cut(s)	1230
Mly113I	GGCGCC	1 cut(s)	1397
MlyI	GAGTC	3 cut(s)	241, 1066, 1184
MmeI	TCCRAC	1 cut(s)	1044
Mox20I	TGGCCA	1 cut(s)	1230
MroXI	GAANNNNTTC	1 cut(s)	852
MscI	TGGCCA	1 cut(s)	1230
MseI	TTAA	3 cut(s)	606, 717, 741
Msp20I	TGGCCA	1 cut(s)	1230
MspA1I	CMGCKG	3 cut(s)	438, 698, 1357
MspI	CCGG	7 cut(s)	83, 123, 139, 158, 272, 299, 381
MspR9I	CCNGG	5 cut(s)	83, 140, 190, 381, 382
MvaI	CCWGG	1 cut(s)	190
MvnI	CGCG	7 cut(s)	27, 72, 133, 135, 176, 438, 1332
MwoI	GCNNNNNNNGC	4 cut(s)	132, 199, 225, 653
NarI	GGCGCC	1 cut(s)	1397
NciI	CCSGG	4 cut(s)	83, 140, 381, 382
NdeII	GATC	8 cut(s)	16, 67, 520, 811, 925, 1189, 1309, 1351
NlaIII	CATG	3 cut(s)	290, 679, 818
NlaIV	GGNNCC	4 cut(s)	42, 87, 149, 1398
NmeAIII	GCCGAG	2 cut(s)	219, 1222
NmuCI	GTSAC	1 cut(s)	533
NruI	TCGCGA	1 cut(s)	72
PaeR7I	CTCGAG	1 cut(s)	686
PagI	TCATGA	1 cut(s)	286
PdmI	GAANNNNTTC	1 cut(s)	852
PfeI	GAWTC	2 cut(s)	128, 443
Ple19I	CGATCG	1 cut(s)	70
PleI	GAGTC	3 cut(s)	240, 1065, 1183
PluTI	GGCGCC	1 cut(s)	1400
PpsI	GAGTC	3 cut(s)	240, 1065, 1183
PpuMI	RGGWCCY	1 cut(s)	775
PshAI	GACNNNNGTC	1 cut(s)	158
PshBI	ATTAAT	1 cut(s)	741
Psp124BI	GAGCTC	2 cut(s)	687, 1330
Psp5II	RGGWCCY	1 cut(s)	775
Psp6I	CCWGG	1 cut(s)	188
PspGI	CCWGG	1 cut(s)	188
PspN4I	GGNNCC	4 cut(s)	42, 87, 149, 1398
PspPI	GGNCC	3 cut(s)	147, 327, 775
PspPPI	RGGWCCY	1 cut(s)	775
PspXI	VCTCGAGB	1 cut(s)	686
PvuI	CGATCG	1 cut(s)	70
PvuII	CAGCTG	1 cut(s)	698
RruI	TCGCGA	1 cut(s)	72
RsaI	GTAC	3 cut(s)	23, 510, 1081
RsaNI	GTAC	3 cut(s)	22, 509, 1080
SacI	GAGCTC	2 cut(s)	687, 1330
SacII	CCGCGG	1 cut(s)	439
SalI	GTCGAC	1 cut(s)	1059
SaqAI	TTAA	3 cut(s)	606, 717, 741
Sau3AI	GATC	8 cut(s)	16, 67, 520, 811, 925, 1189, 1309, 1351
Sau96I	GGNCC	3 cut(s)	147, 327, 775
SchI	GAGTC	3 cut(s)	241, 1066, 1184
ScrFI	CCNGG	5 cut(s)	83, 140, 190, 381, 382
SduI	GDGCHC	2 cut(s)	687, 1330
SfaNI	GCATC	2 cut(s)	285, 697
SfoI	GGCGCC	1 cut(s)	1398
Sfr274I	CTCGAG	1 cut(s)	686
Sfr303I	CCGCGG	1 cut(s)	439
SgrAI	CRCCGGYG	1 cut(s)	122
SgrBI	CCGCGG	1 cut(s)	439
SinI	GGWCC	2 cut(s)	147, 775
SlaI	CTCGAG	1 cut(s)	686
SmaI	CCCGGG	1 cut(s)	382
SmlI	CTYRAG	3 cut(s)	686, 749, 833
SmoI	CTYRAG	3 cut(s)	686, 749, 833
Sse9I	AATT	4 cut(s)	591, 838, 1040, 1320
SspDI	GGCGCC	1 cut(s)	1396
SspI	AATATT	1 cut(s)	1105
SspMI	CTAG	2 cut(s)	929, 1179
SstI	GAGCTC	2 cut(s)	687, 1330
StyD4I	CCNGG	5 cut(s)	81, 138, 188, 379, 380
StyI	CCWWGG	1 cut(s)	970
TaaI	ACNGT	2 cut(s)	545, 1389
TaqI	TCGA	4 cut(s)	66, 687, 886, 1060
TasI	AATT	4 cut(s)	591, 838, 1040, 1320
TatI	WGTACW	1 cut(s)	1079
TauI	GCSGC	7 cut(s)	91, 205, 222, 225, 228, 441, 1360
TfiI	GAWTC	2 cut(s)	128, 443
Tru1I	TTAA	3 cut(s)	606, 717, 741
Tru9I	TTAA	3 cut(s)	606, 717, 741
TscAI	CASTG	3 cut(s)	508, 1146, 1165
TseFI	GTSAC	1 cut(s)	533
TseI	GCWGC	3 cut(s)	790, 890, 1411
Tsp45I	GTSAC	1 cut(s)	533
TspDTI	ATGAA	9 cut(s)	65, 275, 353, 603, 648, 1020, 1332, 1379, 1385
TspGWI	ACGGA	1 cut(s)	9
TspMI	CCCGGG	1 cut(s)	380
TspRI	CASTG	3 cut(s)	508, 1146, 1165
VpaK11BI	GGWCC	2 cut(s)	147, 775
VspI	ATTAAT	1 cut(s)	741
XagI	CCTNNNNNAGG	2 cut(s)	974, 1129
XbaI	TCTAGA	2 cut(s)	928, 1178
XhoI	CTCGAG	1 cut(s)	686
XmaI	CCCGGG	1 cut(s)	380
XmiI	GTMKAC	3 cut(s)	162, 1047, 1060
XmnI	GAANNNNTTC	1 cut(s)	852
XspI	CTAG	2 cut(s)	929, 1179

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.