Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0012255

Physical Location & Seq

Genomic Coordinates Reverse (-)

29086750 .. 29090714

Gene Structure 3965 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG271100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1476 bp

ATGCCTTACGAAGACGATCCGTACCGCGACGAAGATGGTGAGCCATTGATGAACCCGGACGACTTCGATCGCGAGCCGTCGCCGGAGCCGCTCCTCCACGACGATTTGGAGGACGAAGACACCGGCGATTGGCGCGACCGGGAGCGGTCCCAGACGCCGGTGTACGACCCCGACGCGTCGTCCAAATCCAGGCCGAGGAAGCGGCTGGTGAAGAAGGGCGGCGGCGGCGGCGAGAGTCAGAAGGTGGTGGTGTTGAGAGAAGGGGAGGAGTGGCCGGACGATAAGTTTCATGAGTTGATGCCGGATAGTGATGAGGAGGAACAGAGCAGGGCCAAGAGGTTGAAGAAGGAGAAGAGGCATAAGGGGGAGAAGAGGGGGGTGAGATTGCCGGGGAAATCGTCTTCTGATAAGGCCGAGGTCAAGGAGATGTGGGACACCCTTACCCGCGGCGATTCTGAGGATGATAATGAGGGTCAAAGGAATGTGGATGATGACAACTTTATAGATGACACTGGCGTACATCCTTCTGATCGGTATGCAAGTGACAATGACCGTTCTCCCAGTCATCATCCGCAGGCTGAAGAGGGTGAGGAAAATGAAATTGATGAGCTTTTTAAGGTGGGTAAGAAAAAGAAGAAGAATGAAAAAAGTCCAGCAGAAATAGCAATGGTAGTGGAGAATATCATGGCTGAGCTCGAGGTTACAGCTGAAGAGGATGCAGACCTTAACAGACAGGGGAAACCTGCCATTAATAAACTCAAGAAAGTTTCTCTTCTCACAGAGGTCCTCTCAAAGAAGCAGCTTCAACAAGAGTTCTTGGATCATGGAGTGCTAACTCTACTCAAGAATTGGCTTGAACCTCTTCCAGATGGAAGTTTACCAAATATAAACATTCGAGCAGCGATATTGAAGATTTTGACTGATTACCCTCTTGATCTAGAGCAGTATGATAGAAGAGAACAACTGAAGCGAAGTGGCCTTGGAAAGGTCATTATGTTTTTGTCAAAATCTGATGAAGAAACAACTTCCAACAGGAAACTTGCAAAGGAATTGGTTGACAAATGGAGTCGACCTTTATTCAATAAAAGTACAAGGTTTGAGGATATGAGAAATATTGATGAGGAGAGAGTTCCCTTTAGAAGGCCATCAGTGAAAAAGCCAGCGAGCAGTGGTTCAGGAATGGAGTCTAGAGATGGTGATCTTGACTTGGATGAGTTTTCAAGGGAAAGAAAATCTGGCCAATCATCTGCTCGGCAACTTACTTCAAGGCCAGAAGCGACGCAAATGGATTTTCTGGTGCGCCCACAATCTAAGATTGATCCTGATGAAATTAGAGCTCGCGGTAAGCAAGCAATACAGGATCAGCGGCGTATGAAGATGAACAAAAAGTTGCAACAGTTGAAGGCGCCAAAGAAGAAGCAGCTTCAAGCCACAAAGCTAAGTGTGGAGGGTCGTGGTATGGTCAAATACTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000414 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0010793 GO:0019219 GO:0019222 GO:0031056 GO:0031060 GO:0031323 GO:0031326 GO:0031399 GO:0031974 GO:0031981 GO:0032239 GO:0032268 GO:0032386 GO:0032784 GO:0032879 GO:0032880 GO:0033043 GO:0033044 GO:0033157 GO:0035065 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046822 GO:0046825 GO:0046831 GO:0050684 GO:0050789 GO:0050794 GO:0051049 GO:0051128 GO:0051171 GO:0051223 GO:0051246 GO:0051252 GO:0060255 GO:0060341 GO:0065007 GO:0070013 GO:0070201 GO:0080090 GO:0090087 GO:0090239 GO:1901983 GO:1902275 GO:1903311 GO:1903506 GO:1903827 GO:2000112 GO:2000197 GO:2000756 GO:2001141 GO:2001253

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Med26

Protein Analysis

491

Amino Acids

56.45

Weight (kDa)

5.46

Isoelectric Point (pI)

58.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Med26	PF08711	319 - 359	2.2e-12	TFIIS helical bundle-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0012255)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32130 AT1G32130
fragaria_vesca	FvH4_5g23250
malus_domestica	MD06G1038400.v1.1 MD16G1270500.v1.1
prunus_persica	Prupe.5G026700_v2.0.a1 Prupe.5G026700_v2.0.a1
pyrus_communis	pycom06g03210 pycom16g23940
rosa_chinensis	RchiOBHm_Chr7g0212171
rosa_laevigata	RLG00000002920
rosa_multiflora	Rmu_sc0002283.1_g000053
rosa_roxburghii	Rroxscaffold_3G00247050
rosa_rugosa	Rorug07G0131800 Rorug07G0131900
rosa_samantha	Rh7AG264700 Rh7CG281200 Rh7DG271100
rosa_wichuraiana	Rw7G022600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	751
AccB1I	GGYRCC	1 cut(s)	1405
AccBSI	CCGCTC	2 cut(s)	91, 145
AccI	GTMKAC	1 cut(s)	1069
AccII	CGCG	6 cut(s)	27, 72, 135, 176, 447, 1341
AclWI	GGATC	4 cut(s)	11, 828, 1313, 1368
AcoI	YGGCCR	2 cut(s)	272, 1237
AcuI	CTGAAG	3 cut(s)	600, 729, 986
AcyI	GRCGYC	2 cut(s)	155, 1406
AfaI	GTAC	4 cut(s)	23, 164, 519, 1090
AfiI	CCNNNNNNNGG	6 cut(s)	129, 157, 189, 195, 985, 1140
AflIII	ACRYGT	1 cut(s)	174
AgsI	TTSAA	9 cut(s)	343, 806, 857, 910, 1081, 1221, 1266, 1402, 1427
AhdI	GACNNNNNGTC	1 cut(s)	178
AjnI	CCWGG	1 cut(s)	188
AluBI	AGCT	7 cut(s)	610, 694, 707, 802, 1337, 1423, 1438
AluI	AGCT	7 cut(s)	610, 694, 707, 802, 1337, 1423, 1438
Alw21I	GWGCWC	2 cut(s)	696, 1339
AlwI	GGATC	4 cut(s)	11, 828, 1313, 1368
Ama87I	CYCGRG	1 cut(s)	695
AoxI	GGCC	8 cut(s)	191, 272, 330, 411, 976, 1142, 1237, 1268
ApeKI	GCWGC	3 cut(s)	799, 899, 1420
AseI	ATTAAT	1 cut(s)	750
Asp700I	GAANNNNTTC	1 cut(s)	861
AspLEI	GCGC	3 cut(s)	135, 1302, 1408
AspS9I	GGNCC	3 cut(s)	147, 330, 784
AsuC2I	CCSGG	3 cut(s)	56, 140, 390
AsuHPI	GGTGA	5 cut(s)	50, 220, 391, 599, 1208
AvaI	CYCGRG	1 cut(s)	695
AvaII	GGWCC	2 cut(s)	147, 784
BalI	TGGCCA	1 cut(s)	1239
BanI	GGYRCC	1 cut(s)	1405
BanII	GRGCYC	2 cut(s)	696, 1339
BbsI	GAAGAC	3 cut(s)	18, 123, 393
Bbv12I	GWGCWC	2 cut(s)	696, 1339
BbvI	GCAGC	3 cut(s)	811, 911, 1432
BccI	CCATC	4 cut(s)	29, 863, 1153, 1187
BceAI	ACGGC	1 cut(s)	61
BciT130I	CCWGG	1 cut(s)	190
BcnI	CCSGG	3 cut(s)	56, 140, 390
BfaI	CTAG	2 cut(s)	938, 1188
BfoI	RGCGCY	1 cut(s)	1409
BfuAI	ACCTGC	1 cut(s)	751
BlpI	GCTNAGC	1 cut(s)	690
Bme1390I	CCNGG	4 cut(s)	56, 140, 190, 390
Bme18I	GGWCC	2 cut(s)	147, 784
BmeRI	GACNNNNNGTC	1 cut(s)	178
BmeT110I	CYCGRG	1 cut(s)	695
BmgT120I	GGNCC	3 cut(s)	147, 330, 784
BmiI	GGNNCC	3 cut(s)	87, 149, 1407
BmrFI	CCNGG	4 cut(s)	56, 140, 190, 390
BmrI	ACTGGG	1 cut(s)	555
BmsI	GCATC	2 cut(s)	288, 706
BmuI	ACTGGG	1 cut(s)	555
BpiI	GAAGAC	3 cut(s)	18, 123, 393
BplI	GAGNNNNNCTC	2 cut(s)	773, 805
Bpu1102I	GCTNAGC	1 cut(s)	690
BpuEI	CTTGAG	2 cut(s)	743, 827
BpuMI	CCSGG	3 cut(s)	56, 140, 390
BsaBI	GATNNNNATC	1 cut(s)	1197
BsaHI	GRCGYC	2 cut(s)	155, 1406
BsaJI	CCNNGG	5 cut(s)	194, 389, 414, 445, 979
Bsc4I	CCNNNNNNNGG	6 cut(s)	129, 157, 189, 195, 985, 1140
Bse118I	RCCGGY	2 cut(s)	122, 157
Bse1I	ACTGG	2 cut(s)	517, 561
Bse3DI	GCAATG	1 cut(s)	672
Bse8I	GATNNNNATC	1 cut(s)	1197
BseBI	CCWGG	1 cut(s)	190
BseDI	CCNNGG	5 cut(s)	194, 389, 414, 445, 979
BseGI	GGATG	6 cut(s)	466, 493, 520, 568, 721, 1216
BseJI	GATNNNNATC	1 cut(s)	1197
BseLI	CCNNNNNNNGG	6 cut(s)	129, 157, 189, 195, 985, 1140
BseMI	GCAATG	1 cut(s)	672
BseMII	CTCAG	2 cut(s)	447, 681
BseNI	ACTGG	2 cut(s)	517, 561
BseRI	GAGGAG	4 cut(s)	83, 281, 329, 1136
BseXI	GCAGC	3 cut(s)	811, 911, 1432
Bsh1236I	CGCG	6 cut(s)	27, 72, 135, 176, 447, 1341
Bsh1285I	CGRYCG	2 cut(s)	70, 139
BshFI	GGCC	8 cut(s)	193, 274, 332, 413, 978, 1144, 1239, 1270
BshNI	GGYRCC	1 cut(s)	1405
BsiEI	CGRYCG	2 cut(s)	70, 139
BsiHKAI	GWGCWC	2 cut(s)	696, 1339
BsiHKCI	CYCGRG	1 cut(s)	695
BsiSI	CCGG	8 cut(s)	56, 83, 123, 139, 158, 275, 302, 389
BslFI	GGGAC	2 cut(s)	133, 446
BslI	CCNNNNNNNGG	6 cut(s)	129, 157, 189, 195, 985, 1140
BsmFI	GGGAC	2 cut(s)	133, 446
BsnI	GGCC	8 cut(s)	193, 274, 332, 413, 978, 1144, 1239, 1270
BsoBI	CYCGRG	1 cut(s)	695
Bsp1286I	GDGCHC	2 cut(s)	696, 1339
Bsp143I	GATC	8 cut(s)	16, 67, 529, 820, 934, 1198, 1318, 1360
Bsp1720I	GCTNAGC	1 cut(s)	690
Bsp68I	TCGCGA	1 cut(s)	72
BspANI	GGCC	8 cut(s)	193, 274, 332, 413, 978, 1144, 1239, 1270
BspCNI	CTCAG	2 cut(s)	448, 682
BspFNI	CGCG	6 cut(s)	27, 72, 135, 176, 447, 1341
BspHI	TCATGA	1 cut(s)	289
BspLI	GGNNCC	3 cut(s)	87, 149, 1407
BspMI	ACCTGC	1 cut(s)	751
BspPI	GGATC	4 cut(s)	11, 828, 1313, 1368
BspT107I	GGYRCC	1 cut(s)	1405
BsrBI	CCGCTC	2 cut(s)	91, 145
BsrDI	GCAATG	1 cut(s)	672
BsrFI	RCCGGY	2 cut(s)	122, 157
BsrI	ACTGG	2 cut(s)	517, 561
BssAI	RCCGGY	2 cut(s)	122, 157
BssECI	CCNNGG	5 cut(s)	194, 389, 414, 445, 979
BssMI	GATC	8 cut(s)	16, 67, 529, 820, 934, 1198, 1318, 1360
BssNI	GRCGYC	2 cut(s)	155, 1406
BssT1I	CCWWGG	1 cut(s)	979
Bst2UI	CCWGG	1 cut(s)	190
Bst4CI	ACNGT	2 cut(s)	554, 1398
Bst6I	CTCTTC	7 cut(s)	347, 365, 576, 705, 777, 867, 949
BstACI	GRCGYC	2 cut(s)	155, 1406
BstC8I	GCNNGC	6 cut(s)	74, 576, 1161, 1165, 1339, 1350
BstDEI	CTNAG	4 cut(s)	456, 690, 1311, 1439
BstDSI	CCRYGG	1 cut(s)	445
BstENI	CCTNNNNNAGG	2 cut(s)	983, 1138
BstF5I	GGATG	6 cut(s)	466, 493, 520, 568, 721, 1216
BstFNI	CGCG	6 cut(s)	27, 72, 135, 176, 447, 1341
BstH2I	RGCGCY	1 cut(s)	1409
BstHHI	GCGC	3 cut(s)	135, 1302, 1408
BstKTI	GATC	8 cut(s)	19, 70, 532, 823, 937, 1201, 1321, 1363
BstMBI	GATC	8 cut(s)	16, 67, 529, 820, 934, 1198, 1318, 1360
BstMCI	CGRYCG	2 cut(s)	70, 139
BstMWI	GCNNNNNNNGC	6 cut(s)	88, 132, 199, 225, 228, 662
BstNI	CCWGG	1 cut(s)	190
BstSCI	CCNGG	4 cut(s)	54, 138, 188, 388
BstUI	CGCG	6 cut(s)	27, 72, 135, 176, 447, 1341
BstV1I	GCAGC	3 cut(s)	811, 911, 1432
BstV2I	GAAGAC	3 cut(s)	18, 123, 393
BsuRI	GGCC	8 cut(s)	193, 274, 332, 413, 978, 1144, 1239, 1270
BtgI	CCRYGG	1 cut(s)	445
BtsCI	GGATG	6 cut(s)	466, 493, 520, 568, 721, 1216
BtsI	GCAGTG	1 cut(s)	1174
BtsIMutI	CAGTG	3 cut(s)	510, 1155, 1174
BtuMI	TCGCGA	1 cut(s)	72
BveI	ACCTGC	1 cut(s)	751
Cac8I	GCNNGC	6 cut(s)	74, 576, 1161, 1165, 1339, 1350
CciI	TCATGA	1 cut(s)	289
CfoI	GCGC	3 cut(s)	135, 1302, 1408
Cfr10I	RCCGGY	2 cut(s)	122, 157
Cfr13I	GGNCC	3 cut(s)	147, 330, 784
Cfr42I	CCGCGG	1 cut(s)	448
CseI	GACGC	4 cut(s)	163, 165, 182, 1288
Csp6I	GTAC	4 cut(s)	22, 163, 518, 1089
CspCI	CAANNNNNGTGG	2 cut(s)	654, 689
CviAII	CATG	3 cut(s)	290, 685, 824
CviQI	GTAC	4 cut(s)	22, 163, 518, 1089
DdeI	CTNAG	4 cut(s)	456, 690, 1311, 1439
DinI	GGCGCC	1 cut(s)	1407
DpnI	GATC	8 cut(s)	18, 69, 531, 822, 936, 1200, 1320, 1362
DpnII	GATC	8 cut(s)	16, 67, 529, 820, 934, 1198, 1318, 1360
DriI	GACNNNNNGTC	1 cut(s)	178
EaeI	YGGCCR	2 cut(s)	272, 1237
Eam1104I	CTCTTC	7 cut(s)	347, 365, 576, 705, 777, 867, 949
Eam1105I	GACNNNNNGTC	1 cut(s)	178
EarI	CTCTTC	7 cut(s)	347, 365, 576, 705, 777, 867, 949
Ecl136II	GAGCTC	2 cut(s)	694, 1337
Eco130I	CCWWGG	1 cut(s)	979
Eco24I	GRGCYC	2 cut(s)	696, 1339
Eco47I	GGWCC	2 cut(s)	147, 784
Eco53kI	GAGCTC	2 cut(s)	694, 1337
Eco57I	CTGAAG	3 cut(s)	600, 729, 986
Eco88I	CYCGRG	1 cut(s)	695
EcoICRI	GAGCTC	2 cut(s)	694, 1337
EcoNI	CCTNNNNNAGG	2 cut(s)	983, 1138
EcoO109I	RGGNCCY	1 cut(s)	784
EcoRII	CCWGG	1 cut(s)	188
EcoT14I	CCWWGG	1 cut(s)	979
EcoT38I	GRGCYC	2 cut(s)	696, 1339
EgeI	GGCGCC	1 cut(s)	1407
EheI	GGCGCC	1 cut(s)	1407
ErhI	CCWWGG	1 cut(s)	979
FaeI	CATG	3 cut(s)	293, 688, 827
FalI	AAGNNNNNCTT	2 cut(s)	756, 788
FaqI	GGGAC	2 cut(s)	133, 446
FatI	CATG	3 cut(s)	289, 684, 823
FauI	CCCGC	1 cut(s)	452
FblI	GTMKAC	1 cut(s)	1069
FokI	GGATG	6 cut(s)	473, 500, 507, 555, 728, 1223
FriOI	GRGCYC	2 cut(s)	696, 1339
FspBI	CTAG	2 cut(s)	938, 1188
GlaI	GCGC	3 cut(s)	134, 1301, 1407
HaeII	RGCGCY	1 cut(s)	1409
HaeIII	GGCC	8 cut(s)	193, 274, 332, 413, 978, 1144, 1239, 1270
HapII	CCGG	8 cut(s)	56, 83, 123, 139, 158, 275, 302, 389
HgaI	GACGC	4 cut(s)	163, 165, 182, 1288
HhaI	GCGC	3 cut(s)	135, 1302, 1408
Hin1I	GRCGYC	2 cut(s)	155, 1406
Hin1II	CATG	3 cut(s)	293, 688, 827
Hin6I	GCGC	3 cut(s)	133, 1300, 1406
HinP1I	GCGC	3 cut(s)	133, 1300, 1406
HincII	GTYRAC	2 cut(s)	1057, 1070
HindII	GTYRAC	2 cut(s)	1057, 1070
HinfI	GANTC	4 cut(s)	235, 452, 1066, 1184
HpaII	CCGG	8 cut(s)	56, 83, 123, 139, 158, 275, 302, 389
HphI	GGTGA	5 cut(s)	50, 220, 391, 599, 1208
Hpy166II	GTNNAC	4 cut(s)	163, 878, 1057, 1070
Hpy188I	TCNGA	5 cut(s)	240, 406, 457, 529, 1012
Hpy8I	GTNNAC	4 cut(s)	163, 878, 1057, 1070
Hpy99I	CGWCG	6 cut(s)	32, 82, 104, 176, 181, 1282
HpyAV	CCTTC	7 cut(s)	208, 235, 254, 340, 534, 1134, 1396
HpyCH4III	ACNGT	2 cut(s)	554, 1398
HpyCH4V	TGCA	4 cut(s)	539, 719, 1043, 1393
HpyF10VI	GCNNNNNNNGC	6 cut(s)	88, 132, 199, 225, 228, 662
HpyF3I	CTNAG	4 cut(s)	456, 690, 1311, 1439
Hsp92I	GRCGYC	2 cut(s)	155, 1406
Hsp92II	CATG	3 cut(s)	293, 688, 827
HspAI	GCGC	3 cut(s)	133, 1300, 1406
KasI	GGCGCC	1 cut(s)	1405
KspI	CCGCGG	1 cut(s)	448
Kzo9I	GATC	8 cut(s)	16, 67, 529, 820, 934, 1198, 1318, 1360
LmnI	GCTCC	3 cut(s)	85, 96, 142
Lsp1109I	GCAGC	3 cut(s)	811, 911, 1432
LweI	GCATC	2 cut(s)	288, 706
MaeI	CTAG	2 cut(s)	938, 1188
MaeIII	GTNAC	2 cut(s)	542, 700
MalI	GATC	8 cut(s)	18, 69, 531, 822, 936, 1200, 1320, 1362
MbiI	CCGCTC	2 cut(s)	91, 145
MboI	GATC	8 cut(s)	16, 67, 529, 820, 934, 1198, 1318, 1360
MhlI	GDGCHC	2 cut(s)	696, 1339
MlsI	TGGCCA	1 cut(s)	1239
MluCI	AATT	4 cut(s)	600, 847, 1049, 1329
MluI	ACGCGT	1 cut(s)	174
MluNI	TGGCCA	1 cut(s)	1239
Mly113I	GGCGCC	1 cut(s)	1406
MlyI	GAGTC	3 cut(s)	244, 1075, 1193
MmeI	TCCRAC	1 cut(s)	1053
Mox20I	TGGCCA	1 cut(s)	1239
MroXI	GAANNNNTTC	1 cut(s)	861
MscI	TGGCCA	1 cut(s)	1239
MseI	TTAA	3 cut(s)	615, 726, 750
Msp20I	TGGCCA	1 cut(s)	1239
MspA1I	CMGCKG	3 cut(s)	447, 707, 1366
MspI	CCGG	8 cut(s)	56, 83, 123, 139, 158, 275, 302, 389
MspR9I	CCNGG	4 cut(s)	56, 140, 190, 390
MvaI	CCWGG	1 cut(s)	190
MvnI	CGCG	6 cut(s)	27, 72, 135, 176, 447, 1341
MwoI	GCNNNNNNNGC	6 cut(s)	88, 132, 199, 225, 228, 662
NarI	GGCGCC	1 cut(s)	1406
NciI	CCSGG	3 cut(s)	56, 140, 390
NdeII	GATC	8 cut(s)	16, 67, 529, 820, 934, 1198, 1318, 1360
NlaIII	CATG	3 cut(s)	293, 688, 827
NlaIV	GGNNCC	3 cut(s)	87, 149, 1407
NmeAIII	GCCGAG	3 cut(s)	219, 439, 1231
NmuCI	GTSAC	1 cut(s)	542
NruI	TCGCGA	1 cut(s)	72
PaeR7I	CTCGAG	1 cut(s)	695
PagI	TCATGA	1 cut(s)	289
PdmI	GAANNNNTTC	1 cut(s)	861
PfeI	GAWTC	1 cut(s)	452
Ple19I	CGATCG	1 cut(s)	70
PleI	GAGTC	3 cut(s)	243, 1074, 1192
PluTI	GGCGCC	1 cut(s)	1409
PpsI	GAGTC	3 cut(s)	243, 1074, 1192
PpuMI	RGGWCCY	1 cut(s)	784
PshBI	ATTAAT	1 cut(s)	750
Psp124BI	GAGCTC	2 cut(s)	696, 1339
Psp5II	RGGWCCY	1 cut(s)	784
Psp6I	CCWGG	1 cut(s)	188
PspGI	CCWGG	1 cut(s)	188
PspN4I	GGNNCC	3 cut(s)	87, 149, 1407
PspPI	GGNCC	3 cut(s)	147, 330, 784
PspPPI	RGGWCCY	1 cut(s)	784
PspXI	VCTCGAGB	1 cut(s)	695
PvuI	CGATCG	1 cut(s)	70
PvuII	CAGCTG	1 cut(s)	707
RruI	TCGCGA	1 cut(s)	72
RsaI	GTAC	4 cut(s)	23, 164, 519, 1090
RsaNI	GTAC	4 cut(s)	22, 163, 518, 1089
SacI	GAGCTC	2 cut(s)	696, 1339
SacII	CCGCGG	1 cut(s)	448
SalI	GTCGAC	1 cut(s)	1068
SaqAI	TTAA	3 cut(s)	615, 726, 750
Sau3AI	GATC	8 cut(s)	16, 67, 529, 820, 934, 1198, 1318, 1360
Sau96I	GGNCC	3 cut(s)	147, 330, 784
SchI	GAGTC	3 cut(s)	244, 1075, 1193
ScrFI	CCNGG	4 cut(s)	56, 140, 190, 390
SduI	GDGCHC	2 cut(s)	696, 1339
SfaNI	GCATC	2 cut(s)	288, 706
SfoI	GGCGCC	1 cut(s)	1407
Sfr274I	CTCGAG	1 cut(s)	695
Sfr303I	CCGCGG	1 cut(s)	448
SgrAI	CRCCGGYG	2 cut(s)	122, 157
SgrBI	CCGCGG	1 cut(s)	448
SinI	GGWCC	2 cut(s)	147, 784
SlaI	CTCGAG	1 cut(s)	695
SmlI	CTYRAG	3 cut(s)	695, 758, 842
SmoI	CTYRAG	3 cut(s)	695, 758, 842
Sse9I	AATT	4 cut(s)	600, 847, 1049, 1329
SspDI	GGCGCC	1 cut(s)	1405
SspI	AATATT	1 cut(s)	1114
SspMI	CTAG	2 cut(s)	938, 1188
SstI	GAGCTC	2 cut(s)	696, 1339
StyD4I	CCNGG	4 cut(s)	54, 138, 188, 388
StyI	CCWWGG	1 cut(s)	979
TaaI	ACNGT	2 cut(s)	554, 1398
TaqI	TCGA	4 cut(s)	66, 696, 895, 1069
TasI	AATT	4 cut(s)	600, 847, 1049, 1329
TatI	WGTACW	1 cut(s)	1088
TauI	GCSGC	8 cut(s)	91, 205, 222, 225, 228, 231, 450, 1369
TfiI	GAWTC	1 cut(s)	452
Tru1I	TTAA	3 cut(s)	615, 726, 750
Tru9I	TTAA	3 cut(s)	615, 726, 750
TscAI	CASTG	3 cut(s)	517, 1155, 1174
TseFI	GTSAC	1 cut(s)	542
TseI	GCWGC	3 cut(s)	799, 899, 1420
Tsp45I	GTSAC	1 cut(s)	542
TspDTI	ATGAA	8 cut(s)	65, 278, 612, 657, 1029, 1341, 1388, 1394
TspGWI	ACGGA	1 cut(s)	9
TspRI	CASTG	3 cut(s)	517, 1155, 1174
VpaK11BI	GGWCC	2 cut(s)	147, 784
VspI	ATTAAT	1 cut(s)	750
XagI	CCTNNNNNAGG	2 cut(s)	983, 1138
XbaI	TCTAGA	2 cut(s)	937, 1187
XhoI	CTCGAG	1 cut(s)	695
XmiI	GTMKAC	1 cut(s)	1069
XmnI	GAANNNNTTC	1 cut(s)	861
XspI	CTAG	2 cut(s)	938, 1188

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.