Rmu_sc0003168.1_g000001

Glucose-6-phosphate isomerase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003168.1
Physical Location & Seq
Reverse (-)
2 .. 4903
4902 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003168.1_g000001.1.cds

Sequence Viewer

Length: 1612 bp
atggcttcatctgctttgatctctgatactgagccttggaaagatttgaagggccatgttgaggagataaacaagacccatttgcgtgatttgatgaatgatgttaaccgctgccaggcaatgatggttgagtttgatgggttgctgttggactactcgcggcagcgtgcaacccttgaaaccatggggaaactgatcaaattggcagaggctgcaggcctcaaagataagatcaaccgaatgtttgccggagagcatataaacagcacagaaaatagatcagtgcttcatgtagctcttcgtgctccgagggatgcagttatacagagtgatgggaaaaatgtggtcctagatgtttgggaagttctggacaagatccagaagttctctgaaacaattcggagtggatcttgggttggagccactggaaaagcactgaaggatgttgttgctgttggtattggcggcagtttcttaggtcctctgtttgtgcatacagctcttcaaacagatccagaggccattgaagcagcaagaggacggcagctgcatttccttgcaaatgttgatcctattgacgttgctagaaatattgctgggttgaacccagaaactacccttgttgtggtagtttcgaagacctttacaacagctgaaactatgttgaatgctcggacccttagggaatggatttcatcttctcttggacctgctgcagtggcaaaacacatggtagcagttagcactaatcttacgcttgtagagaagtttgggattgaccctaagaatgcttttgcattttgggactgggttggtggtcgttatagcgtttgcagtgctgtcggagtgtttcccttgtctcttcagtatgggttttcagttgttgagaaattcttaaagggagctttaagcatggatcaacatttccactcatcaccattggagaaaaatatacctgttcttttaggtctgttgagcgtatggaatgtttcgtttcttggataccctgcaagggctatcttaccttactcccaagcactggagaagcttgctcctcacattcaacaggttagcatggaaagtaatggcaagggagtatccattgatggtgtactacttccgtttgaggctggtgaaattgattttggtgaaccaggaacaaatggtcagcacagcttttaccaactaattcaccagggtcgcgttattccttgtgatttcattggtattgtgaagagtcagcaacctgtttacctgaaaggtgaactggtgagtaaccatgatgagctcatgtccaacttttttgcacagccagatgcccttgcatatgggaagaccccagaacagctgcaaaaggagaacgttgcactgcatcttatccctcataagactttttctggaaaccggccttctcttagccttctgcttccatcactgaatgcttacaatattggacagttattggcaatctatgaacatagaattgcagtggaaggtttcgtatggggcattaattcttttgaccagtggggagtagaattggggaagtcattggcaactcaagtcagaaagcaactccatgcatctcgtaccgaaggaaaaactgttgagg
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

537

Amino Acids

58.99

Weight (kDa)

6.29

Isoelectric Point (pI)

29.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 718
AccB7I CCANNNNNTGG 1 cut(s) 1039
AccII CGCG 2 cut(s) 160, 1203
AciI CCGC 3 cut(s) 109, 160, 465
AclI AACGTT 1 cut(s) 1362
AclWI GGATC 5 cut(s) 370, 415, 506, 563, 924
AcsI RAATTY 1 cut(s) 890
AcuI CTGAAG 2 cut(s) 458, 848
AfaI GTAC 2 cut(s) 1113, 1591
AfiI CCNNNNNNNGG 5 cut(s) 61, 115, 625, 1012, 1039
AgsI TTSAA 7 cut(s) 49, 179, 506, 527, 604, 667, 1064
AjnI CCWGG 3 cut(s) 114, 1153, 1194
AjuI GAANNNNNNNTTGG 2 cut(s) 1128, 1160
AluBI AGCT 9 cut(s) 296, 500, 547, 653, 905, 1048, 1176, 1288, 1348
AluI AGCT 9 cut(s) 296, 500, 547, 653, 905, 1048, 1176, 1288, 1348
Alw21I GWGCWC 2 cut(s) 307, 1290
Alw26I GTCTC 1 cut(s) 864
AlwI GGATC 5 cut(s) 370, 415, 506, 563, 924
AlwNI CAGNNNCTG 1 cut(s) 212
AoxI GGCC 4 cut(s) 52, 217, 519, 1406
ApeKI GCWGC 8 cut(s) 111, 163, 212, 530, 544, 547, 713, 1348
ApoI RAATTY 1 cut(s) 890
AseI ATTAAT 1 cut(s) 1512
Asp700I GAANNNNTTC 1 cut(s) 396
AspS9I GGNCC 5 cut(s) 52, 346, 479, 675, 707
AsuHPI GGTGA 6 cut(s) 927, 1145, 1160, 1184, 1274, 1282
AsuII TTCGAA 1 cut(s) 635
AvaII GGWCC 4 cut(s) 346, 479, 675, 707
AxyI CCTNAGG 1 cut(s) 680
BanII GRGCYC 1 cut(s) 1290
BbsI GAAGAC 2 cut(s) 644, 1340
Bbv12I GWGCWC 2 cut(s) 307, 1290
BbvI GCAGC 8 cut(s) 98, 175, 199, 534, 542, 556, 700, 1335
BccI CCATC 5 cut(s) 118, 131, 326, 1100, 1438
BceAI ACGGC 1 cut(s) 557
BcgI CGANNNNNNTGC 2 cut(s) 823, 857
BciT130I CCWGG 3 cut(s) 116, 1155, 1196
BciVI GTATCC 2 cut(s) 995, 1108
BclI TGATCA 1 cut(s) 195
BcoDI GTCTC 1 cut(s) 864
BfaI CTAG 2 cut(s) 350, 585
BfmI CTRYAG 2 cut(s) 213, 714
BfuAI ACCTGC 1 cut(s) 718
BfuI GTATCC 2 cut(s) 995, 1108
Bme1390I CCNGG 3 cut(s) 116, 1155, 1196
Bme18I GGWCC 4 cut(s) 346, 479, 675, 707
BmgT120I GGNCC 5 cut(s) 52, 346, 479, 675, 707
BmiI GGNNCC 2 cut(s) 421, 677
BmrFI CCNGG 3 cut(s) 116, 1155, 1196
BmrI ACTGGG 1 cut(s) 817
BmsI GCATC 4 cut(s) 304, 1306, 1381, 1592
BmuI ACTGGG 1 cut(s) 817
BpiI GAAGAC 2 cut(s) 644, 1340
BpmI CTGGAG 1 cut(s) 1061
Bpu14I TTCGAA 1 cut(s) 635
BpuEI CTTGAG 1 cut(s) 1545
BsaJI CCNNGG 4 cut(s) 35, 183, 308, 1195
Bsc4I CCNNNNNNNGG 5 cut(s) 61, 115, 625, 1012, 1039
Bse118I RCCGGY 1 cut(s) 1404
Bse1I ACTGG 5 cut(s) 430, 812, 1044, 1272, 1525
Bse21I CCTNAGG 1 cut(s) 680
Bse3DI GCAATG 1 cut(s) 126
BseBI CCWGG 3 cut(s) 116, 1155, 1196
BseDI CCNNGG 4 cut(s) 35, 183, 308, 1195
BseGI GGATG 2 cut(s) 319, 448
BseLI CCNNNNNNNGG 5 cut(s) 61, 115, 625, 1012, 1039
BseMI GCAATG 1 cut(s) 126
BseMII CTCAG 1 cut(s) 21
BseNI ACTGG 5 cut(s) 430, 812, 1044, 1272, 1525
BseRI GAGGAG 2 cut(s) 77, 1044
BseXI GCAGC 8 cut(s) 98, 175, 199, 534, 542, 556, 700, 1335
BseYI CCCAGC 1 cut(s) 596
Bsh1236I CGCG 2 cut(s) 160, 1203
BshFI GGCC 4 cut(s) 54, 219, 521, 1408
BsiHKAI GWGCWC 2 cut(s) 307, 1290
BsiSI CCGG 2 cut(s) 249, 1405
BslFI GGGAC 1 cut(s) 818
BslI CCNNNNNNNGG 5 cut(s) 61, 115, 625, 1012, 1039
BsmAI GTCTC 1 cut(s) 864
BsmFI GGGAC 1 cut(s) 818
BsmI GAATGC 3 cut(s) 673, 793, 1444
BsnI GGCC 4 cut(s) 54, 219, 521, 1408
Bsp119I TTCGAA 1 cut(s) 635
Bsp1286I GDGCHC 2 cut(s) 307, 1290
Bsp143I GATC 9 cut(s) 18, 195, 231, 278, 375, 407, 511, 568, 916
Bsp19I CCATGG 1 cut(s) 183
BspACI CCGC 3 cut(s) 109, 160, 465
BspANI GGCC 4 cut(s) 54, 219, 521, 1408
BspCNI CTCAG 1 cut(s) 22
BspFNI CGCG 2 cut(s) 160, 1203
BspLI GGNNCC 2 cut(s) 421, 677
BspMAI CTGCAG 2 cut(s) 217, 718
BspMI ACCTGC 1 cut(s) 718
BspPI GGATC 5 cut(s) 370, 415, 506, 563, 924
BspQI GCTCTTC 2 cut(s) 303, 507
BspT104I TTCGAA 1 cut(s) 635
BsrDI GCAATG 1 cut(s) 126
BsrFI RCCGGY 1 cut(s) 1404
BsrI ACTGG 5 cut(s) 430, 812, 1044, 1272, 1525
BssAI RCCGGY 1 cut(s) 1404
BssECI CCNNGG 4 cut(s) 35, 183, 308, 1195
BssMI GATC 9 cut(s) 18, 195, 231, 278, 375, 407, 511, 568, 916
BssT1I CCWWGG 2 cut(s) 35, 183
Bst2UI CCWGG 3 cut(s) 116, 1155, 1196
Bst4CI ACNGT 2 cut(s) 1458, 1606
Bst6I CTCTTC 4 cut(s) 303, 507, 867, 1229
BstAPI GCANNNNNTGC 1 cut(s) 212
BstBI TTCGAA 1 cut(s) 635
BstC8I GCNNGC 3 cut(s) 168, 217, 1050
BstDEI CTNAG 5 cut(s) 30, 475, 680, 783, 1415
BstDSI CCRYGG 1 cut(s) 183
BstF5I GGATG 2 cut(s) 319, 448
BstFNI CGCG 2 cut(s) 160, 1203
BstKTI GATC 9 cut(s) 21, 198, 234, 281, 378, 410, 514, 571, 919
BstMAI GTCTC 1 cut(s) 864
BstMBI GATC 9 cut(s) 18, 195, 231, 278, 375, 407, 511, 568, 916
BstMWI GCNNNNNNNGC 5 cut(s) 11, 212, 302, 527, 719
BstNI CCWGG 3 cut(s) 116, 1155, 1196
BstSCI CCNGG 3 cut(s) 114, 1153, 1194
BstSFI CTRYAG 2 cut(s) 213, 714
BstUI CGCG 2 cut(s) 160, 1203
BstV1I GCAGC 8 cut(s) 98, 175, 199, 534, 542, 556, 700, 1335
BstV2I GAAGAC 2 cut(s) 644, 1340
BstX2I RGATCY 3 cut(s) 375, 407, 511
BstYI RGATCY 3 cut(s) 375, 407, 511
Bsu36I CCTNAGG 1 cut(s) 680
BsuI GTATCC 2 cut(s) 995, 1108
BsuRI GGCC 4 cut(s) 54, 219, 521, 1408
BtgI CCRYGG 1 cut(s) 183
BtsCI GGATG 2 cut(s) 319, 448
BtsI GCAGTG 4 cut(s) 723, 841, 1367, 1494
BveI ACCTGC 1 cut(s) 718
Cac8I GCNNGC 3 cut(s) 168, 217, 1050
CaiI CAGNNNCTG 1 cut(s) 212
Cfr10I RCCGGY 1 cut(s) 1404
Cfr13I GGNCC 5 cut(s) 52, 346, 479, 675, 707
Csp6I GTAC 2 cut(s) 1112, 1590
CviAII CATG 9 cut(s) 56, 184, 290, 730, 913, 1075, 1280, 1291, 1580
CviQI GTAC 2 cut(s) 1112, 1590
DdeI CTNAG 5 cut(s) 30, 475, 680, 783, 1415
DpnI GATC 9 cut(s) 20, 197, 233, 280, 377, 409, 513, 570, 918
DpnII GATC 9 cut(s) 18, 195, 231, 278, 375, 407, 511, 568, 916
Eam1104I CTCTTC 4 cut(s) 303, 507, 867, 1229
EarI CTCTTC 4 cut(s) 303, 507, 867, 1229
Ecl136II GAGCTC 1 cut(s) 1288
Eco130I CCWWGG 2 cut(s) 35, 183
Eco147I AGGCCT 1 cut(s) 219
Eco24I GRGCYC 1 cut(s) 1290
Eco47I GGWCC 4 cut(s) 346, 479, 675, 707
Eco53kI GAGCTC 1 cut(s) 1288
Eco57I CTGAAG 2 cut(s) 458, 848
Eco81I CCTNAGG 1 cut(s) 680
EcoICRI GAGCTC 1 cut(s) 1288
EcoO109I RGGNCCY 1 cut(s) 479
EcoRII CCWGG 3 cut(s) 114, 1153, 1194
EcoT14I CCWWGG 2 cut(s) 35, 183
EcoT22I ATGCAT 1 cut(s) 1585
EcoT38I GRGCYC 1 cut(s) 1290
ErhI CCWWGG 2 cut(s) 35, 183
FaeI CATG 9 cut(s) 59, 187, 293, 733, 916, 1078, 1283, 1294, 1583
FaqI GGGAC 1 cut(s) 818
FatI CATG 9 cut(s) 55, 183, 289, 729, 912, 1074, 1279, 1290, 1579
FauNDI CATATG 1 cut(s) 1327
FbaI TGATCA 1 cut(s) 195
FokI GGATG 2 cut(s) 326, 455
FriOI GRGCYC 1 cut(s) 1290
FspBI CTAG 2 cut(s) 350, 585
GsaI CCCAGC 1 cut(s) 600
GsuI CTGGAG 1 cut(s) 1061
HaeIII GGCC 4 cut(s) 54, 219, 521, 1408
HapII CCGG 2 cut(s) 249, 1405
Hin1II CATG 9 cut(s) 59, 187, 293, 733, 916, 1078, 1283, 1294, 1583
HincII GTYRAC 1 cut(s) 106
HindII GTYRAC 1 cut(s) 106
HindIII AAGCTT 1 cut(s) 1046
HinfI GANTC 1 cut(s) 1237
HpaI GTTAAC 1 cut(s) 106
HpaII CCGG 2 cut(s) 249, 1405
HphI GGTGA 6 cut(s) 927, 1145, 1160, 1184, 1274, 1282
Hpy166II GTNNAC 5 cut(s) 106, 1112, 1151, 1252, 1265
Hpy188I TCNGA 7 cut(s) 25, 309, 391, 402, 675, 845, 1568
Hpy188III TCNNGA 4 cut(s) 368, 379, 515, 1398
Hpy8I GTNNAC 5 cut(s) 106, 1112, 1151, 1252, 1265
HpyAV CCTTC 6 cut(s) 43, 433, 1419, 1430, 1487, 1589
HpyCH4III ACNGT 2 cut(s) 1458, 1606
HpyCH4IV ACGT 2 cut(s) 579, 1362
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 212, 302, 527, 719
HpyF3I CTNAG 5 cut(s) 30, 475, 680, 783, 1415
HpySE526I ACGT 2 cut(s) 579, 1362
Hsp92II CATG 9 cut(s) 59, 187, 293, 733, 916, 1078, 1283, 1294, 1583
Ksp22I TGATCA 1 cut(s) 195
KspAI GTTAAC 1 cut(s) 106
Kzo9I GATC 9 cut(s) 18, 195, 231, 278, 375, 407, 511, 568, 916
LguI GCTCTTC 2 cut(s) 303, 507
LmnI GCTCC 4 cut(s) 310, 419, 902, 1057
Lsp1109I GCAGC 8 cut(s) 98, 175, 199, 534, 542, 556, 700, 1335
LweI GCATC 4 cut(s) 304, 1306, 1381, 1592
MaeI CTAG 2 cut(s) 350, 585
MaeII ACGT 2 cut(s) 579, 1362
MaeIII GTNAC 1 cut(s) 1274
MalI GATC 9 cut(s) 20, 197, 233, 280, 377, 409, 513, 570, 918
MboI GATC 9 cut(s) 18, 195, 231, 278, 375, 407, 511, 568, 916
MboII GAAGA 7 cut(s) 290, 494, 649, 690, 854, 1246, 1345
MflI RGATCY 3 cut(s) 375, 407, 511
MhlI GDGCHC 2 cut(s) 307, 1290
MluCI AATT 8 cut(s) 200, 396, 890, 1137, 1188, 1482, 1513, 1538
MlyI GAGTC 1 cut(s) 1246
MmeI TCCRAC 4 cut(s) 129, 397, 823, 1320
Mph1103I ATGCAT 1 cut(s) 1585
MroXI GAANNNNTTC 1 cut(s) 396
MseI TTAA 4 cut(s) 105, 896, 908, 1512
MslI CAYNNNNRTG 1 cut(s) 84
MspA1I CMGCKG 4 cut(s) 111, 547, 653, 1348
MspI CCGG 2 cut(s) 249, 1405
MspR9I CCNGG 3 cut(s) 116, 1155, 1196
Mva1269I GAATGC 3 cut(s) 673, 793, 1444
MvaI CCWGG 3 cut(s) 116, 1155, 1196
MvnI CGCG 2 cut(s) 160, 1203
MwoI GCNNNNNNNGC 5 cut(s) 11, 212, 302, 527, 719
NcoI CCATGG 1 cut(s) 183
NdeI CATATG 1 cut(s) 1327
NdeII GATC 9 cut(s) 18, 195, 231, 278, 375, 407, 511, 568, 916
NlaIII CATG 9 cut(s) 59, 187, 293, 733, 916, 1078, 1283, 1294, 1583
NlaIV GGNNCC 2 cut(s) 421, 677
NsiI ATGCAT 1 cut(s) 1585
NspV TTCGAA 1 cut(s) 635
PceI AGGCCT 1 cut(s) 219
PciSI GCTCTTC 2 cut(s) 303, 507
PctI GAATGC 3 cut(s) 673, 793, 1444
PdmI GAANNNNTTC 1 cut(s) 396
PflMI CCANNNNNTGG 1 cut(s) 1039
PleI GAGTC 1 cut(s) 1245
PpsI GAGTC 1 cut(s) 1245
PpuMI RGGWCCY 1 cut(s) 479
PshBI ATTAAT 1 cut(s) 1512
Psp124BI GAGCTC 1 cut(s) 1290
Psp1406I AACGTT 1 cut(s) 1362
Psp5II RGGWCCY 1 cut(s) 479
Psp6I CCWGG 3 cut(s) 114, 1153, 1194
PspFI CCCAGC 1 cut(s) 596
PspGI CCWGG 3 cut(s) 114, 1153, 1194
PspN4I GGNNCC 2 cut(s) 421, 677
PspPI GGNCC 5 cut(s) 52, 346, 479, 675, 707
PspPPI RGGWCCY 1 cut(s) 479
PstI CTGCAG 2 cut(s) 217, 718
PstNI CAGNNNCTG 1 cut(s) 212
PsuI RGATCY 3 cut(s) 375, 407, 511
PvuII CAGCTG 3 cut(s) 547, 653, 1348
RsaI GTAC 2 cut(s) 1113, 1591
RsaNI GTAC 2 cut(s) 1112, 1590
RseI CAYNNNNRTG 1 cut(s) 84
SacI GAGCTC 1 cut(s) 1290
SapI GCTCTTC 2 cut(s) 303, 507
SaqAI TTAA 4 cut(s) 105, 896, 908, 1512
Sau3AI GATC 9 cut(s) 18, 195, 231, 278, 375, 407, 511, 568, 916
Sau96I GGNCC 5 cut(s) 52, 346, 479, 675, 707
SchI GAGTC 1 cut(s) 1246
ScrFI CCNGG 3 cut(s) 116, 1155, 1196
SduI GDGCHC 2 cut(s) 307, 1290
SfaNI GCATC 4 cut(s) 304, 1306, 1381, 1592
SfcI CTRYAG 2 cut(s) 213, 714
SfuI TTCGAA 1 cut(s) 635
SinI GGWCC 4 cut(s) 346, 479, 675, 707
SmiMI CAYNNNNRTG 1 cut(s) 84
SmlI CTYRAG 1 cut(s) 1560
SmoI CTYRAG 1 cut(s) 1560
Sse9I AATT 8 cut(s) 200, 396, 890, 1137, 1188, 1482, 1513, 1538
SseBI AGGCCT 1 cut(s) 219
SsiI CCGC 3 cut(s) 109, 160, 465
SspI AATATT 2 cut(s) 592, 1450
SspMI CTAG 2 cut(s) 350, 585
SstI GAGCTC 1 cut(s) 1290
StuI AGGCCT 1 cut(s) 219
StyD4I CCNGG 3 cut(s) 114, 1153, 1194
StyI CCWWGG 2 cut(s) 35, 183
TaaI ACNGT 2 cut(s) 1458, 1606
TaiI ACGT 2 cut(s) 582, 1365
TaqI TCGA 1 cut(s) 635
TasI AATT 8 cut(s) 200, 396, 890, 1137, 1188, 1482, 1513, 1538
TatI WGTACW 1 cut(s) 1111
TauI GCSGC 2 cut(s) 163, 468
Tru1I TTAA 4 cut(s) 105, 896, 908, 1512
Tru9I TTAA 4 cut(s) 105, 896, 908, 1512
TseI GCWGC 8 cut(s) 111, 163, 212, 530, 544, 547, 713, 1348
TspDTI ATGAA 5 cut(s) 110, 278, 684, 1210, 1488
TspGWI ACGGA 1 cut(s) 1110
Van91I CCANNNNNTGG 1 cut(s) 1039
VpaK11BI GGWCC 4 cut(s) 346, 479, 675, 707
VspI ATTAAT 1 cut(s) 1512
XapI RAATTY 1 cut(s) 890
XmnI GAANNNNTTC 1 cut(s) 396
XspI CTAG 2 cut(s) 350, 585
Zsp2I ATGCAT 1 cut(s) 1585
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.