Rmu_sc0003405.1_g000001

Agglutinin domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003405.1
OG0017297
Physical Location & Seq
Forward (+)
1133 .. 2895
1763 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003405.1_g000001.1.cds

Sequence Viewer

Length: 1668 bp
atggcgttagtaactttaccagtatccatgacactccgtccattcggcaacaagttattgcagtacgtacatgaagatgtggaggcacatggcttgctcatagcagacggagacgacgttatgagtccgttaagtaagctggaggtgttgcaggcacggtcgggtaacggacgagtgcatataagatgcagttataacaacaagttcttggccgtccggagagaaggcgattccgtggttgcagcggtggccgaggaacctgtggaggacgaatcagcatggtcatgcaccatgttcttgcctgcaaatatccctggttataacaacaagttcttggccgtccggagagaaggcgattccgtggtggcagcggtggccgaggaacctgtggaggacgaatcagcatggtcatgcaccatgttcttgcctgcaaatatccctgggtacagtaataacaacattcagttgttgcatgtgcaactcggacgcaacctgttcatcgatcgacaaaatcctgttcttgcagtatcatcagaagtagcagcaaatccccaacatgcaactcacatgatattcggtttcgtcgatttggcacccctgttcatgatgcccagacacgtggcgtttaaaggggataacggcgattaccttcggttcatgtcgatcaacaaccagccatttctacagttcagttccggcgtcgataaatggcatctatcggtgttgcacgaggtctctaacgacgttactgattatggaaactttcgcattaggtgcaatgctagcaatgtcaacgacggattctggaggcgtaaccgtgattctgatgctgaatggattcatgccgactcagttctcttgccccacaactcgcccttgagccaccgctggggcgacacccattttacggccgtcaaggttgcagaaaataatgaaggcatcatcgtcgctttcagaagcaccaacaataactacttgatgcgacggagcgcttccaatgtgcaaaacgtactcagtgcccacgccgcgtccattatcccagaagcacgcctggtggtggaagagcttgtcagatccagacttatctacaacgtcaatttcaacctcctggactcgaggatctacgctggcaatccggagatagcgacgggccaaaattttgaaaacaaaacatcactacctcagactatggagctcaccttcacatatactcaaataaggactagtacatggaatgccactgtctcaaccaccgctggtgtgtctacaactttcaggaccggtattccgttcatagcagcaggtgagatcactacttcacttgaggttacatcatcatacgattggggacgaagttatgaagacatagaaacacgcgaggataagatcactgttactgtgccaccaatgacgcatgtcacggttagcaggatagagacacggggttcctgtgatgttcccttctcttacactcagcaagacactctttataattgggagacaagtgtctaccaaaagcatgatggcctttacagaggggttaatagcttcaacatccactaccaggctagagaggaatccctgccatccagagcaacccaagaaacaaagacctatccaatttttcctcatacttctcgacttctgtcgtctgtgcctgctgggtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aerolysin Agglutinin ETX_MTX2 Fascin

Protein Analysis

555

Amino Acids

62.18

Weight (kDa)

5.64

Isoelectric Point (pI)

52.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017297)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g03090 FvH4_6g05700 FvH4_6g22110
rosa_chinensis RchiOBHm_Chr3g0479441
rosa_laevigata RLG00000023573
rosa_multiflora Rmu_co8054592.1_g000001 Rmu_sc0003405.1_g000001 Rmu_sc0015035.1_g000004
rosa_roxburghii Rroxscaffold_6G00402270
rosa_rugosa Rorug03G0175300
rosa_samantha Rh3CG255500 Rh3DG251700
rosa_wichuraiana Rw3G020220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 195, 321, 1491
AarI CACCTGC 1 cut(s) 1292
Acc36I ACCTGC 1 cut(s) 1292
AccB1I GGYRCC 1 cut(s) 592
AccI GTMKAC 2 cut(s) 1265, 1509
AccII CGCG 2 cut(s) 1028, 1377
AccIII TCCGGA 3 cut(s) 216, 342, 1135
AciI CCGC 5 cut(s) 245, 371, 886, 1026, 1254
AclWI GGATC 2 cut(s) 1068, 1127
AcoI YGGCCR 5 cut(s) 210, 249, 336, 375, 909
AcsI RAATTY 1 cut(s) 1156
AcvI CACGTG 1 cut(s) 619
AcyI GRCGYC 1 cut(s) 699
AfaI GTAC 5 cut(s) 65, 69, 446, 1011, 1228
AfeI AGCGCT 1 cut(s) 991
AfiI CCNNNNNNNGG 4 cut(s) 889, 907, 1057, 1564
AflIII ACRYGT 1 cut(s) 616
AgeI ACCGGT 1 cut(s) 1280
AgsI TTSAA 3 cut(s) 1102, 1163, 1552
AhdI GACNNNNNGTC 1 cut(s) 36
AhlI ACTAGT 1 cut(s) 1223
AjnI CCWGG 5 cut(s) 313, 439, 1050, 1107, 1563
AluBI AGCT 4 cut(s) 139, 1066, 1195, 1548
AluI AGCT 4 cut(s) 139, 1066, 1195, 1548
Alw21I GWGCWC 1 cut(s) 1197
Alw26I GTCTC 5 cut(s) 105, 739, 1249, 1430, 1493
AlwI GGATC 2 cut(s) 1068, 1127
Ama87I CYCGRG 1 cut(s) 1114
Aor13HI TCCGGA 3 cut(s) 216, 342, 1135
Aor51HI AGCGCT 1 cut(s) 991
AoxI GGCC 7 cut(s) 210, 249, 336, 375, 909, 1150, 1525
ApeKI GCWGC 4 cut(s) 242, 368, 542, 1298
ApoI RAATTY 1 cut(s) 1156
AsiGI ACCGGT 1 cut(s) 1280
Asp700I GAANNNNTTC 1 cut(s) 837
AspLEI GCGC 1 cut(s) 992
AspS9I GGNCC 2 cut(s) 1150, 1278
AsuHPI GGTGA 2 cut(s) 1189, 1316
AsuNHI GCTAGC 1 cut(s) 782
AvaI CYCGRG 1 cut(s) 1114
AvaII GGWCC 1 cut(s) 1278
BaeGI GKGCMC 1 cut(s) 1021
BanI GGYRCC 1 cut(s) 592
BanII GRGCYC 1 cut(s) 1197
BauI CACGAG 1 cut(s) 728
BbrPI CACGTG 1 cut(s) 619
BbsI GAAGAC 1 cut(s) 1368
Bbv12I GWGCWC 1 cut(s) 1197
BbvI GCAGC 4 cut(s) 254, 380, 554, 1310
BccI CCATC 2 cut(s) 1517, 1594
BceAI ACGGC 5 cut(s) 197, 323, 655, 896, 924
BcgI CGANNNNNNTGC 2 cut(s) 928, 962
BciT130I CCWGG 5 cut(s) 315, 441, 1052, 1109, 1565
BciVI GTATCC 1 cut(s) 34
BcoDI GTCTC 5 cut(s) 105, 739, 1249, 1430, 1493
BcuI ACTAGT 1 cut(s) 1223
BfaI CTAG 3 cut(s) 783, 1224, 1569
BfmI CTRYAG 1 cut(s) 683
BfoI RGCGCY 1 cut(s) 993
BfuAI ACCTGC 1 cut(s) 1292
BfuI GTATCC 1 cut(s) 34
BisI GCNGC 5 cut(s) 243, 369, 543, 1026, 1299
BlsI GCNGC 5 cut(s) 244, 370, 544, 1027, 1300
Bme1390I CCNGG 5 cut(s) 315, 441, 1052, 1109, 1565
Bme18I GGWCC 1 cut(s) 1278
BmeRI GACNNNNNGTC 1 cut(s) 36
BmeT110I CYCGRG 1 cut(s) 1114
BmgT120I GGNCC 2 cut(s) 1150, 1278
BmiI GGNNCC 4 cut(s) 258, 384, 594, 1447
BmrFI CCNGG 5 cut(s) 315, 441, 1052, 1109, 1565
BmsI GCATC 6 cut(s) 176, 597, 721, 817, 948, 969
BmtI GCTAGC 1 cut(s) 786
BoxI GACNNNNGTC 3 cut(s) 1415, 1505, 1645
BpiI GAAGAC 1 cut(s) 1368
BpmI CTGGAG 2 cut(s) 161, 826
BpuEI CTTGAG 2 cut(s) 898, 1343
Bsa29I ATCGAT 1 cut(s) 501
BsaAI YACGTR 2 cut(s) 67, 619
BsaHI GRCGYC 1 cut(s) 699
BsaI GGTCTC 1 cut(s) 739
BsaJI CCNNGG 7 cut(s) 234, 252, 313, 360, 378, 439, 440
BsaWI WCCGGW 4 cut(s) 216, 342, 1135, 1280
BsaXI ACNNNNNCTCC 2 cut(s) 102, 132
Bsc4I CCNNNNNNNGG 4 cut(s) 889, 907, 1057, 1564
Bse118I RCCGGY 1 cut(s) 1280
Bse1I ACTGG 1 cut(s) 20
Bse3DI GCAATG 2 cut(s) 784, 793
BseAI TCCGGA 3 cut(s) 216, 342, 1135
BseBI CCWGG 5 cut(s) 315, 441, 1052, 1109, 1565
BseCI ATCGAT 1 cut(s) 501
BseDI CCNNGG 7 cut(s) 234, 252, 313, 360, 378, 439, 440
BseGI GGATG 2 cut(s) 1554, 1586
BseLI CCNNNNNNNGG 4 cut(s) 889, 907, 1057, 1564
BseMI GCAATG 2 cut(s) 784, 793
BseMII CTCAG 4 cut(s) 864, 1027, 1196, 1487
BseNI ACTGG 1 cut(s) 20
BseSI GKGCMC 1 cut(s) 1021
BseX3I CGGCCG 1 cut(s) 909
BseXI GCAGC 4 cut(s) 254, 380, 554, 1310
BseYI CCCAGC 2 cut(s) 888, 1661
Bsh1236I CGCG 2 cut(s) 1028, 1377
Bsh1285I CGRYCG 3 cut(s) 161, 505, 912
BshFI GGCC 7 cut(s) 212, 251, 338, 377, 911, 1152, 1527
BshNI GGYRCC 1 cut(s) 592
BshTI ACCGGT 1 cut(s) 1280
BshVI ATCGAT 1 cut(s) 501
BsiEI CGRYCG 3 cut(s) 161, 505, 912
BsiHKAI GWGCWC 1 cut(s) 1197
BsiHKCI CYCGRG 1 cut(s) 1114
BsiSI CCGG 5 cut(s) 217, 343, 696, 1136, 1281
BslFI GGGAC 1 cut(s) 1362
BslI CCNNNNNNNGG 4 cut(s) 889, 907, 1057, 1564
BsmAI GTCTC 5 cut(s) 105, 739, 1249, 1430, 1493
BsmBI CGTCTC 1 cut(s) 105
BsmFI GGGAC 1 cut(s) 1362
BsmI GAATGC 1 cut(s) 1240
BsnI GGCC 7 cut(s) 212, 251, 338, 377, 911, 1152, 1527
Bso31I GGTCTC 1 cut(s) 739
BsoBI CYCGRG 1 cut(s) 1114
Bsp1286I GDGCHC 2 cut(s) 1021, 1197
Bsp13I TCCGGA 3 cut(s) 216, 342, 1135
Bsp143I GATC 6 cut(s) 502, 663, 1073, 1119, 1308, 1386
BspACI CCGC 5 cut(s) 245, 371, 886, 1026, 1254
BspANI GGCC 7 cut(s) 212, 251, 338, 377, 911, 1152, 1527
BspCNI CTCAG 4 cut(s) 863, 1026, 1195, 1486
BspDI ATCGAT 1 cut(s) 501
BspEI TCCGGA 3 cut(s) 216, 342, 1135
BspFNI CGCG 2 cut(s) 1028, 1377
BspHI TCATGA 1 cut(s) 603
BspLI GGNNCC 4 cut(s) 258, 384, 594, 1447
BspMI ACCTGC 1 cut(s) 1292
BspOI GCTAGC 1 cut(s) 786
BspPI GGATC 2 cut(s) 1068, 1127
BspQI GCTCTTC 1 cut(s) 1056
BspT107I GGYRCC 1 cut(s) 592
BspTNI GGTCTC 1 cut(s) 739
BsrDI GCAATG 2 cut(s) 784, 793
BsrFI RCCGGY 1 cut(s) 1280
BsrI ACTGG 1 cut(s) 20
BssAI RCCGGY 1 cut(s) 1280
BssECI CCNNGG 7 cut(s) 234, 252, 313, 360, 378, 439, 440
BssMI GATC 6 cut(s) 502, 663, 1073, 1119, 1308, 1386
BssNI GRCGYC 1 cut(s) 699
BssSI CACGAG 1 cut(s) 728
Bst2BI CACGAG 1 cut(s) 728
Bst2UI CCWGG 5 cut(s) 315, 441, 1052, 1109, 1565
Bst4CI ACNGT 8 cut(s) 159, 449, 687, 818, 1243, 1393, 1399, 1423
Bst6I CTCTTC 1 cut(s) 1056
BstACI GRCGYC 1 cut(s) 699
BstAPI GCANNNNNTGC 1 cut(s) 774
BstBAI YACGTR 2 cut(s) 67, 619
BstC8I GCNNGC 8 cut(s) 95, 153, 303, 429, 784, 1048, 1129, 1659
BstDEI CTNAG 4 cut(s) 850, 1013, 1182, 1473
BstDSI CCRYGG 2 cut(s) 234, 360
BstF5I GGATG 2 cut(s) 1554, 1586
BstFNI CGCG 2 cut(s) 1028, 1377
BstH2I RGCGCY 1 cut(s) 993
BstHHI GCGC 1 cut(s) 992
BstKTI GATC 6 cut(s) 505, 666, 1076, 1122, 1311, 1389
BstMAI GTCTC 5 cut(s) 105, 739, 1249, 1430, 1493
BstMBI GATC 6 cut(s) 502, 663, 1073, 1119, 1308, 1386
BstMCI CGRYCG 3 cut(s) 161, 505, 912
BstMWI GCNNNNNNNGC 5 cut(s) 248, 374, 774, 783, 1025
BstNI CCWGG 5 cut(s) 315, 441, 1052, 1109, 1565
BstNSI RCATGY 3 cut(s) 476, 560, 1418
BstPAI GACNNNNGTC 3 cut(s) 1415, 1505, 1645
BstSCI CCNGG 5 cut(s) 313, 439, 1050, 1107, 1563
BstSFI CTRYAG 1 cut(s) 683
BstSLI GKGCMC 1 cut(s) 1021
BstSNI TACGTA 1 cut(s) 67
BstUI CGCG 2 cut(s) 1028, 1377
BstV1I GCAGC 4 cut(s) 254, 380, 554, 1310
BstV2I GAAGAC 1 cut(s) 1368
BstX2I RGATCY 2 cut(s) 1073, 1119
BstXI CCANNNNNNTGG 1 cut(s) 619
BstYI RGATCY 2 cut(s) 1073, 1119
BstZI CGGCCG 1 cut(s) 909
Bsu15I ATCGAT 1 cut(s) 501
BsuI GTATCC 1 cut(s) 34
BsuRI GGCC 7 cut(s) 212, 251, 338, 377, 911, 1152, 1527
BsuTUI ATCGAT 1 cut(s) 501
BtgI CCRYGG 2 cut(s) 234, 360
BtsCI GGATG 2 cut(s) 1554, 1586
BtsIMutI CAGTG 3 cut(s) 1021, 1239, 1389
BveI ACCTGC 1 cut(s) 1292
Cac8I GCNNGC 8 cut(s) 95, 153, 303, 429, 784, 1048, 1129, 1659
CciI TCATGA 1 cut(s) 603
CfoI GCGC 1 cut(s) 992
Cfr10I RCCGGY 1 cut(s) 1280
Cfr13I GGNCC 2 cut(s) 1150, 1278
ClaI ATCGAT 1 cut(s) 501
CseI GACGC 4 cut(s) 495, 688, 1017, 1420
Csp6I GTAC 5 cut(s) 64, 68, 445, 1010, 1227
CspAI ACCGGT 1 cut(s) 1280
CviQI GTAC 5 cut(s) 64, 68, 445, 1010, 1227
DdeI CTNAG 4 cut(s) 850, 1013, 1182, 1473
DpnI GATC 6 cut(s) 504, 665, 1075, 1121, 1310, 1388
DpnII GATC 6 cut(s) 502, 663, 1073, 1119, 1308, 1386
DraI TTTAAA 1 cut(s) 628
DriI GACNNNNNGTC 1 cut(s) 36
EaeI YGGCCR 5 cut(s) 210, 249, 336, 375, 909
EagI CGGCCG 1 cut(s) 909
Eam1104I CTCTTC 1 cut(s) 1056
Eam1105I GACNNNNNGTC 1 cut(s) 36
EarI CTCTTC 1 cut(s) 1056
Ecl136II GAGCTC 1 cut(s) 1195
EclXI CGGCCG 1 cut(s) 909
Eco105I TACGTA 1 cut(s) 67
Eco24I GRGCYC 1 cut(s) 1197
Eco31I GGTCTC 1 cut(s) 739
Eco47I GGWCC 1 cut(s) 1278
Eco47III AGCGCT 1 cut(s) 991
Eco52I CGGCCG 1 cut(s) 909
Eco53kI GAGCTC 1 cut(s) 1195
Eco72I CACGTG 1 cut(s) 619
Eco88I CYCGRG 1 cut(s) 1114
EcoICRI GAGCTC 1 cut(s) 1195
EcoRII CCWGG 5 cut(s) 313, 439, 1050, 1107, 1563
EcoT38I GRGCYC 1 cut(s) 1197
Esp3I CGTCTC 1 cut(s) 105
FalI AAGNNNNNCTT 2 cut(s) 1470, 1502
FaqI GGGAC 1 cut(s) 1362
FblI GTMKAC 2 cut(s) 1265, 1509
Fnu4HI GCNGC 5 cut(s) 243, 369, 543, 1026, 1299
FokI GGATG 2 cut(s) 1541, 1573
FriOI GRGCYC 1 cut(s) 1197
Fsp4HI GCNGC 5 cut(s) 243, 369, 543, 1026, 1299
FspBI CTAG 3 cut(s) 783, 1224, 1569
GlaI GCGC 1 cut(s) 991
GluI GCNGC 5 cut(s) 243, 369, 543, 1026, 1299
GsaI CCCAGC 2 cut(s) 892, 1665
GsuI CTGGAG 2 cut(s) 161, 826
HaeII RGCGCY 1 cut(s) 993
HaeIII GGCC 7 cut(s) 212, 251, 338, 377, 911, 1152, 1527
HapII CCGG 5 cut(s) 217, 343, 696, 1136, 1281
HgaI GACGC 4 cut(s) 495, 688, 1017, 1420
HhaI GCGC 1 cut(s) 992
Hin1I GRCGYC 1 cut(s) 699
Hin6I GCGC 1 cut(s) 990
HinP1I GCGC 1 cut(s) 990
HincII GTYRAC 1 cut(s) 793
HindII GTYRAC 1 cut(s) 793
HpaII CCGG 5 cut(s) 217, 343, 696, 1136, 1281
HphI GGTGA 2 cut(s) 1189, 1316
Hpy166II GTNNAC 3 cut(s) 793, 1266, 1510
Hpy188I TCNGA 6 cut(s) 485, 535, 826, 956, 1073, 1185
Hpy188III TCNNGA 9 cut(s) 217, 343, 604, 805, 1077, 1136, 1276, 1590, 1638
Hpy8I GTNNAC 3 cut(s) 793, 1266, 1510
Hpy99I CGWCG 8 cut(s) 119, 587, 704, 746, 800, 950, 987, 1150
HpyAV CCTTC 6 cut(s) 218, 344, 659, 929, 1210, 1471
HpyCH4III ACNGT 8 cut(s) 159, 449, 687, 818, 1243, 1393, 1399, 1423
HpyCH4IV ACGT 6 cut(s) 66, 117, 618, 744, 1008, 1092
HpyF10VI GCNNNNNNNGC 5 cut(s) 248, 374, 774, 783, 1025
HpyF3I CTNAG 4 cut(s) 850, 1013, 1182, 1473
HpySE526I ACGT 6 cut(s) 66, 117, 618, 744, 1008, 1092
Hsp92I GRCGYC 1 cut(s) 699
HspAI GCGC 1 cut(s) 990
Kpn2I TCCGGA 3 cut(s) 216, 342, 1135
Kzo9I GATC 6 cut(s) 502, 663, 1073, 1119, 1308, 1386
LguI GCTCTTC 1 cut(s) 1056
LmnI GCTCC 2 cut(s) 987, 1192
Lsp1109I GCAGC 4 cut(s) 254, 380, 554, 1310
LweI GCATC 6 cut(s) 176, 597, 721, 817, 948, 969
MaeI CTAG 3 cut(s) 783, 1224, 1569
MaeII ACGT 6 cut(s) 66, 117, 618, 744, 1008, 1092
MaeIII GTNAC 7 cut(s) 10, 164, 745, 812, 1327, 1393, 1417
MalI GATC 6 cut(s) 504, 665, 1075, 1121, 1310, 1388
MboI GATC 6 cut(s) 502, 663, 1073, 1119, 1308, 1386
MboII GAAGA 3 cut(s) 86, 1073, 1373
MflI RGATCY 2 cut(s) 1073, 1119
MhlI GDGCHC 2 cut(s) 1021, 1197
MluCI AATT 4 cut(s) 1096, 1156, 1492, 1620
MlyI GAGTC 3 cut(s) 133, 842, 1106
MroI TCCGGA 3 cut(s) 216, 342, 1135
MroXI GAANNNNTTC 1 cut(s) 837
MseI TTAA 3 cut(s) 131, 627, 1542
MslI CAYNNNNRTG 3 cut(s) 75, 283, 409
MspA1I CMGCKG 4 cut(s) 245, 371, 888, 1256
MspI CCGG 5 cut(s) 217, 343, 696, 1136, 1281
MspR9I CCNGG 5 cut(s) 315, 441, 1052, 1109, 1565
Mva1269I GAATGC 1 cut(s) 1240
MvaI CCWGG 5 cut(s) 315, 441, 1052, 1109, 1565
MvnI CGCG 2 cut(s) 1028, 1377
MwoI GCNNNNNNNGC 5 cut(s) 248, 374, 774, 783, 1025
NdeII GATC 6 cut(s) 502, 663, 1073, 1119, 1308, 1386
NheI GCTAGC 1 cut(s) 782
NlaIV GGNNCC 4 cut(s) 258, 384, 594, 1447
NmeAIII GCCGAG 2 cut(s) 277, 403
NmuCI GTSAC 1 cut(s) 1417
NspI RCATGY 3 cut(s) 476, 560, 1418
PaeR7I CTCGAG 1 cut(s) 1114
PagI TCATGA 1 cut(s) 603
PaqCI CACCTGC 1 cut(s) 1292
PasI CCCWGGG 1 cut(s) 440
PciSI GCTCTTC 1 cut(s) 1056
PcsI WCGNNNNNNNCGW 2 cut(s) 114, 582
PctI GAATGC 1 cut(s) 1240
PdmI GAANNNNTTC 1 cut(s) 837
PfeI GAWTC 8 cut(s) 230, 272, 356, 398, 801, 821, 838, 1577
PfoI TCCNGGA 1 cut(s) 1107
PinAI ACCGGT 1 cut(s) 1280
PkrI GCNGC 5 cut(s) 244, 370, 544, 1027, 1300
Ple19I CGATCG 1 cut(s) 505
PleI GAGTC 3 cut(s) 132, 842, 1106
PmaCI CACGTG 1 cut(s) 619
PmlI CACGTG 1 cut(s) 619
PpsI GAGTC 3 cut(s) 132, 842, 1106
Ppu21I YACGTR 2 cut(s) 67, 619
PshAI GACNNNNGTC 3 cut(s) 1415, 1505, 1645
PsiI TTATAA 3 cut(s) 195, 321, 1491
Psp124BI GAGCTC 1 cut(s) 1197
Psp6I CCWGG 5 cut(s) 313, 439, 1050, 1107, 1563
PspCI CACGTG 1 cut(s) 619
PspFI CCCAGC 2 cut(s) 888, 1661
PspGI CCWGG 5 cut(s) 313, 439, 1050, 1107, 1563
PspN4I GGNNCC 4 cut(s) 258, 384, 594, 1447
PspPI GGNCC 2 cut(s) 1150, 1278
PspXI VCTCGAGB 1 cut(s) 1114
PsuI RGATCY 2 cut(s) 1073, 1119
PvuI CGATCG 1 cut(s) 505
RsaI GTAC 5 cut(s) 65, 69, 446, 1011, 1228
RsaNI GTAC 5 cut(s) 64, 68, 445, 1010, 1227
RseI CAYNNNNRTG 3 cut(s) 75, 283, 409
SacI GAGCTC 1 cut(s) 1197
SapI GCTCTTC 1 cut(s) 1056
SaqAI TTAA 3 cut(s) 131, 627, 1542
SatI GCNGC 5 cut(s) 243, 369, 543, 1026, 1299
Sau3AI GATC 6 cut(s) 502, 663, 1073, 1119, 1308, 1386
Sau96I GGNCC 2 cut(s) 1150, 1278
SchI GAGTC 3 cut(s) 133, 842, 1106
ScrFI CCNGG 5 cut(s) 315, 441, 1052, 1109, 1565
SduI GDGCHC 2 cut(s) 1021, 1197
SfaNI GCATC 6 cut(s) 176, 597, 721, 817, 948, 969
SfcI CTRYAG 1 cut(s) 683
Sfr274I CTCGAG 1 cut(s) 1114
SinI GGWCC 1 cut(s) 1278
SlaI CTCGAG 1 cut(s) 1114
SmiMI CAYNNNNRTG 3 cut(s) 75, 283, 409
SmlI CTYRAG 3 cut(s) 877, 1114, 1322
SmoI CTYRAG 3 cut(s) 877, 1114, 1322
SnaBI TACGTA 1 cut(s) 67
SpeI ACTAGT 1 cut(s) 1223
Sse9I AATT 4 cut(s) 1096, 1156, 1492, 1620
SsiI CCGC 5 cut(s) 245, 371, 886, 1026, 1254
SspMI CTAG 3 cut(s) 783, 1224, 1569
SstI GAGCTC 1 cut(s) 1197
StyD4I CCNGG 5 cut(s) 313, 439, 1050, 1107, 1563
TaaI ACNGT 8 cut(s) 159, 449, 687, 818, 1243, 1393, 1399, 1423
TaiI ACGT 6 cut(s) 69, 120, 621, 747, 1011, 1095
TaqI TCGA 7 cut(s) 501, 505, 585, 662, 702, 1115, 1639
TasI AATT 4 cut(s) 1096, 1156, 1492, 1620
TatI WGTACW 1 cut(s) 1226
TauI GCSGC 1 cut(s) 1028
TfiI GAWTC 8 cut(s) 230, 272, 356, 398, 801, 821, 838, 1577
Tru1I TTAA 3 cut(s) 131, 627, 1542
Tru9I TTAA 3 cut(s) 131, 627, 1542
TscAI CASTG 3 cut(s) 1021, 1246, 1396
TseFI GTSAC 1 cut(s) 1417
TseI GCWGC 4 cut(s) 242, 368, 542, 1298
Tsp45I GTSAC 1 cut(s) 1417
TspDTI ATGAA 8 cut(s) 87, 487, 592, 646, 830, 948, 1282, 1374
TspGWI ACGGA 9 cut(s) 26, 117, 123, 183, 223, 349, 813, 1000, 1278
TspRI CASTG 3 cut(s) 1021, 1246, 1396
VpaK11BI GGWCC 1 cut(s) 1278
XapI RAATTY 1 cut(s) 1156
XceI RCATGY 3 cut(s) 476, 560, 1418
XcmI CCANNNNNNNNNTGG 1 cut(s) 1520
XhoI CTCGAG 1 cut(s) 1114
XmiI GTMKAC 2 cut(s) 1265, 1509
XmnI GAANNNNTTC 1 cut(s) 837
XspI CTAG 3 cut(s) 783, 1224, 1569
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.