Rroxscaffold_6G00402270

Agglutinin domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0017297
Physical Location & Seq
Reverse (-)
24640632 .. 24642802
2171 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00402270.1

Sequence Viewer

Length: 1542 bp
ATGGCGCTAGTAACTTTACCAACATCCATGGCACTCCAGCCATTCGGCAACAAGTTTTTGCAGTACGTACATGAAGATGTGGAGGCACATGGCTTGCTCATAGCAGACGGAGACGACGTTATGAGTCCGTTAAGTAAGCTGGAGGTGTTGCAGGCACGGTCGGGTAACGGACGAGTGCATATAAGATGCAGTTATAACAACAAGTTCTTGGCCGTCCGGAGAGAAGGCGATTCCGTAGTGGCAGCGGTGGCCGAGGAACCTGTGGAGGACGAATCAGCATGGTCGTGCACCATGTTCTTGCCTGCAAATATCCCTGGGTACAGTAATAACAGCATTCAGTTGTTGCATGTGCAACTCGGACGCAACCTGTTCATCGATCGACAAAATCCTGTTCTTGCAGTATCATCAGAAGTAGCAGCAAATCCCCAACATGCAACTCACATGATATTCGGTTTCTTCGATTTGGCACCCCTGTTCATGATGCCCAGACACGTGGCGTTTAAAGGGGATAACGGCGATTACCTTCGGTTCATGTCGATCAACAACCAGCCATTTCTACAGTTCAGTTCCGGCGTCGATAAATGGCACCCATCGGTGTTGCACGAGGTCTCTAACGACGTTACTGATTATGGAAACTTTCGCATTAGGTGCAATGCTAGCAATGTCAACGACGGATTCTGGAGGCGTAACCGTGATTCTAATGCTGAATGGATTCATGCCGACTCAGTTCTCTTGCCCCACAACTCGCCCTTGGGCCACCGCTGGGGCGACACCCATTTTACGGCAGTCAAGGTTGCAGAAAATAATGAAGGCATCATCGTCGCTTTCAGAAGCACCAACAACAACTACTTAATGCGACGGACTGCTTCCAATGTGCAAAACGTACTCAGTGCCCACGCCGCGTCCATTATCCCAGAAGCACGCCTGGTGGTGGAAGAGCTTGTCAGATCCAGACTAATCTACAACGTCAATTTCAACCTCCTGGACTCGAGGATCTACTCTGGCAACCCGGAGATAGCGACGGGCCAAGATTTTGAAAACAAAACATCACTACCTCAGACTATGGAGCTCACCTTCACATATACTCAAACAAGGACTAGTACATGGAATGCCACTGTCTCAACCACCGCTGGTGTGTCTACAACTTTCAGGACCGGTGTTCCGTTCATAGCAGCAGGTGAGATCACTACTTCACTTGAGGTTACAGCATCATACGATTGGGGACGAAGTTATGAAGACATAGAAACACGCGAGGATAAGATCACTGTTACTGTTCCACCAATGACTCATGTCACGGTTAGCAGGATAGAGACACGGGGTTCCTGTGATGTTCCCTTCTCTTACACTCAGCAAGACACTCTTTATAATTGGGAGACAAGTGTCTACCAAAAGCATGATGGCCTTTACAGAGGGGTTAATAGCTTCAACATCTACTACCAGGCTAGAGAGGAACCCCTGCCATCCCGCGCAACCCAAGAAACAAAGACCTATCCAATTCTTCCTCATACTTCTCGACTTCTGTCGTCTGTGCCTGCTGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aerolysin Agglutinin ETX_MTX2 Fascin

Protein Analysis

513

Amino Acids

57.56

Weight (kDa)

5.79

Isoelectric Point (pI)

48.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Agglutinin PF07468 6 - 121 1.5e-15 Agglutinin domain
Agglutinin PF07468 164 - 300 5.5e-08 Agglutinin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017297)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g03090 FvH4_6g05700 FvH4_6g22110
rosa_chinensis RchiOBHm_Chr3g0479441
rosa_laevigata RLG00000023573
rosa_multiflora Rmu_co8054592.1_g000001 Rmu_sc0003405.1_g000001 Rmu_sc0015035.1_g000004
rosa_roxburghii Rroxscaffold_6G00402270
rosa_rugosa Rorug03G0175300
rosa_samantha Rh3CG255500 Rh3DG251700
rosa_wichuraiana Rw3G020220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 195, 1365
AarI CACCTGC 1 cut(s) 1166
Acc36I ACCTGC 1 cut(s) 1166
AccB1I GGYRCC 2 cut(s) 466, 585
AccI GTMKAC 2 cut(s) 1139, 1383
AccII CGCG 3 cut(s) 902, 1251, 1467
AccIII TCCGGA 1 cut(s) 216
AciI CCGC 5 cut(s) 245, 760, 900, 1128, 1465
AclWI GGATC 2 cut(s) 942, 1001
AcoI YGGCCR 2 cut(s) 210, 249
AcvI CACGTG 1 cut(s) 493
AcyI GRCGYC 1 cut(s) 573
AfaI GTAC 5 cut(s) 65, 69, 320, 885, 1102
AfiI CCNNNNNNNGG 3 cut(s) 763, 781, 931
AflIII ACRYGT 1 cut(s) 490
AgeI ACCGGT 1 cut(s) 1154
AgsI TTSAA 3 cut(s) 976, 1037, 1426
AhlI ACTAGT 1 cut(s) 1097
AjnI CCWGG 4 cut(s) 313, 924, 981, 1437
AluBI AGCT 4 cut(s) 139, 940, 1069, 1422
AluI AGCT 4 cut(s) 139, 940, 1069, 1422
Alw21I GWGCWC 2 cut(s) 290, 1071
Alw26I GTCTC 5 cut(s) 105, 613, 1123, 1304, 1367
Alw44I GTGCAC 1 cut(s) 286
AlwI GGATC 2 cut(s) 942, 1001
Ama87I CYCGRG 1 cut(s) 988
Aor13HI TCCGGA 1 cut(s) 216
AoxI GGCC 5 cut(s) 210, 249, 754, 1024, 1399
ApaLI GTGCAC 1 cut(s) 286
ApeKI GCWGC 3 cut(s) 242, 416, 1172
AsiGI ACCGGT 1 cut(s) 1154
Asp700I GAANNNNTTC 1 cut(s) 711
AspLEI GCGC 2 cut(s) 7, 1469
AspS9I GGNCC 3 cut(s) 754, 1024, 1152
AsuC2I CCSGG 1 cut(s) 1010
AsuHPI GGTGA 2 cut(s) 1063, 1190
AsuNHI GCTAGC 1 cut(s) 656
AvaI CYCGRG 1 cut(s) 988
AvaII GGWCC 1 cut(s) 1152
BaeGI GKGCMC 2 cut(s) 290, 895
BanI GGYRCC 2 cut(s) 466, 585
BanII GRGCYC 1 cut(s) 1071
BauI CACGAG 1 cut(s) 602
BbrPI CACGTG 1 cut(s) 493
BbsI GAAGAC 1 cut(s) 1242
Bbv12I GWGCWC 2 cut(s) 290, 1071
BbvI GCAGC 3 cut(s) 254, 428, 1184
BccI CCATC 3 cut(s) 598, 1391, 1468
BceAI ACGGC 3 cut(s) 197, 529, 798
BcgI CGANNNNNNTGC 2 cut(s) 802, 836
BciT130I CCWGG 4 cut(s) 315, 926, 983, 1439
BcnI CCSGG 1 cut(s) 1010
BcoDI GTCTC 5 cut(s) 105, 613, 1123, 1304, 1367
BcuI ACTAGT 1 cut(s) 1097
BfaI CTAG 5 cut(s) 8, 657, 1098, 1443, 1540
BfmI CTRYAG 1 cut(s) 557
BfoI RGCGCY 1 cut(s) 8
BfuAI ACCTGC 1 cut(s) 1166
BisI GCNGC 4 cut(s) 243, 417, 900, 1173
BlsI GCNGC 4 cut(s) 244, 418, 901, 1174
Bme1390I CCNGG 5 cut(s) 315, 926, 983, 1010, 1439
Bme18I GGWCC 1 cut(s) 1152
BmeT110I CYCGRG 1 cut(s) 988
BmgT120I GGNCC 3 cut(s) 754, 1024, 1152
BmiI GGNNCC 5 cut(s) 258, 468, 587, 1321, 1452
BmrFI CCNGG 5 cut(s) 315, 926, 983, 1010, 1439
BmsI GCATC 4 cut(s) 176, 471, 822, 1217
BmtI GCTAGC 1 cut(s) 660
BoxI GACNNNNGTC 3 cut(s) 1289, 1379, 1519
BpiI GAAGAC 1 cut(s) 1242
BpmI CTGGAG 3 cut(s) 20, 161, 700
BpuEI CTTGAG 1 cut(s) 1217
BpuMI CCSGG 1 cut(s) 1010
Bsa29I ATCGAT 1 cut(s) 375
BsaAI YACGTR 2 cut(s) 67, 493
BsaHI GRCGYC 1 cut(s) 573
BsaI GGTCTC 1 cut(s) 613
BsaJI CCNNGG 5 cut(s) 27, 252, 313, 314, 750
BsaWI WCCGGW 2 cut(s) 216, 1154
BsaXI ACNNNNNCTCC 2 cut(s) 102, 132
Bsc4I CCNNNNNNNGG 3 cut(s) 763, 781, 931
Bse118I RCCGGY 1 cut(s) 1154
Bse3DI GCAATG 2 cut(s) 658, 667
BseAI TCCGGA 1 cut(s) 216
BseBI CCWGG 4 cut(s) 315, 926, 983, 1439
BseCI ATCGAT 1 cut(s) 375
BseDI CCNNGG 5 cut(s) 27, 252, 313, 314, 750
BseGI GGATG 2 cut(s) 23, 1460
BseLI CCNNNNNNNGG 3 cut(s) 763, 781, 931
BseMI GCAATG 2 cut(s) 658, 667
BseMII CTCAG 4 cut(s) 738, 901, 1070, 1361
BseSI GKGCMC 2 cut(s) 290, 895
BseXI GCAGC 3 cut(s) 254, 428, 1184
BseYI CCCAGC 1 cut(s) 762
Bsh1236I CGCG 3 cut(s) 902, 1251, 1467
Bsh1285I CGRYCG 2 cut(s) 161, 379
BshFI GGCC 5 cut(s) 212, 251, 756, 1026, 1401
BshNI GGYRCC 2 cut(s) 466, 585
BshTI ACCGGT 1 cut(s) 1154
BshVI ATCGAT 1 cut(s) 375
BsiEI CGRYCG 2 cut(s) 161, 379
BsiHKAI GWGCWC 2 cut(s) 290, 1071
BsiHKCI CYCGRG 1 cut(s) 988
BsiSI CCGG 4 cut(s) 217, 570, 1010, 1155
BslFI GGGAC 1 cut(s) 1236
BslI CCNNNNNNNGG 3 cut(s) 763, 781, 931
BsmAI GTCTC 5 cut(s) 105, 613, 1123, 1304, 1367
BsmBI CGTCTC 1 cut(s) 105
BsmFI GGGAC 1 cut(s) 1236
BsmI GAATGC 2 cut(s) 333, 1114
BsnI GGCC 5 cut(s) 212, 251, 756, 1026, 1401
Bso31I GGTCTC 1 cut(s) 613
BsoBI CYCGRG 1 cut(s) 988
Bsp1286I GDGCHC 3 cut(s) 290, 895, 1071
Bsp13I TCCGGA 1 cut(s) 216
Bsp143I GATC 6 cut(s) 376, 537, 947, 993, 1182, 1260
Bsp19I CCATGG 1 cut(s) 27
BspACI CCGC 5 cut(s) 245, 760, 900, 1128, 1465
BspANI GGCC 5 cut(s) 212, 251, 756, 1026, 1401
BspCNI CTCAG 4 cut(s) 737, 900, 1069, 1360
BspDI ATCGAT 1 cut(s) 375
BspEI TCCGGA 1 cut(s) 216
BspFNI CGCG 3 cut(s) 902, 1251, 1467
BspHI TCATGA 1 cut(s) 477
BspLI GGNNCC 5 cut(s) 258, 468, 587, 1321, 1452
BspMI ACCTGC 1 cut(s) 1166
BspOI GCTAGC 1 cut(s) 660
BspPI GGATC 2 cut(s) 942, 1001
BspQI GCTCTTC 1 cut(s) 930
BspT107I GGYRCC 2 cut(s) 466, 585
BspTNI GGTCTC 1 cut(s) 613
BsrDI GCAATG 2 cut(s) 658, 667
BsrFI RCCGGY 1 cut(s) 1154
BssAI RCCGGY 1 cut(s) 1154
BssECI CCNNGG 5 cut(s) 27, 252, 313, 314, 750
BssMI GATC 6 cut(s) 376, 537, 947, 993, 1182, 1260
BssNI GRCGYC 1 cut(s) 573
BssSI CACGAG 1 cut(s) 602
BssT1I CCWWGG 2 cut(s) 27, 750
Bst2BI CACGAG 1 cut(s) 602
Bst2UI CCWGG 4 cut(s) 315, 926, 983, 1439
Bst4CI ACNGT 8 cut(s) 159, 323, 561, 692, 1117, 1267, 1273, 1297
Bst6I CTCTTC 1 cut(s) 930
BstACI GRCGYC 1 cut(s) 573
BstAPI GCANNNNNTGC 1 cut(s) 648
BstBAI YACGTR 2 cut(s) 67, 493
BstC8I GCNNGC 7 cut(s) 95, 153, 303, 658, 922, 1533, 1537
BstDEI CTNAG 4 cut(s) 724, 887, 1056, 1347
BstDSI CCRYGG 1 cut(s) 27
BstF5I GGATG 2 cut(s) 23, 1460
BstFNI CGCG 3 cut(s) 902, 1251, 1467
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 2 cut(s) 7, 1469
BstKTI GATC 6 cut(s) 379, 540, 950, 996, 1185, 1263
BstMAI GTCTC 5 cut(s) 105, 613, 1123, 1304, 1367
BstMBI GATC 6 cut(s) 376, 537, 947, 993, 1182, 1260
BstMCI CGRYCG 2 cut(s) 161, 379
BstMWI GCNNNNNNNGC 4 cut(s) 248, 648, 657, 899
BstNI CCWGG 4 cut(s) 315, 926, 983, 1439
BstNSI RCATGY 2 cut(s) 350, 434
BstPAI GACNNNNGTC 3 cut(s) 1289, 1379, 1519
BstSCI CCNGG 5 cut(s) 313, 924, 981, 1008, 1437
BstSFI CTRYAG 1 cut(s) 557
BstSLI GKGCMC 2 cut(s) 290, 895
BstSNI TACGTA 1 cut(s) 67
BstUI CGCG 3 cut(s) 902, 1251, 1467
BstV1I GCAGC 3 cut(s) 254, 428, 1184
BstV2I GAAGAC 1 cut(s) 1242
BstX2I RGATCY 2 cut(s) 947, 993
BstXI CCANNNNNNTGG 1 cut(s) 493
BstYI RGATCY 2 cut(s) 947, 993
Bsu15I ATCGAT 1 cut(s) 375
BsuRI GGCC 5 cut(s) 212, 251, 756, 1026, 1401
BsuTUI ATCGAT 1 cut(s) 375
BtgI CCRYGG 1 cut(s) 27
BtsCI GGATG 2 cut(s) 23, 1460
BtsIMutI CAGTG 3 cut(s) 895, 1113, 1263
BveI ACCTGC 1 cut(s) 1166
Cac8I GCNNGC 7 cut(s) 95, 153, 303, 658, 922, 1533, 1537
CciI TCATGA 1 cut(s) 477
CfoI GCGC 2 cut(s) 7, 1469
Cfr10I RCCGGY 1 cut(s) 1154
Cfr13I GGNCC 3 cut(s) 754, 1024, 1152
ClaI ATCGAT 1 cut(s) 375
CseI GACGC 3 cut(s) 369, 562, 891
Csp6I GTAC 5 cut(s) 64, 68, 319, 884, 1101
CspAI ACCGGT 1 cut(s) 1154
CviQI GTAC 5 cut(s) 64, 68, 319, 884, 1101
DdeI CTNAG 4 cut(s) 724, 887, 1056, 1347
DpnI GATC 6 cut(s) 378, 539, 949, 995, 1184, 1262
DpnII GATC 6 cut(s) 376, 537, 947, 993, 1182, 1260
DraI TTTAAA 1 cut(s) 502
EaeI YGGCCR 2 cut(s) 210, 249
Eam1104I CTCTTC 1 cut(s) 930
EarI CTCTTC 1 cut(s) 930
Ecl136II GAGCTC 1 cut(s) 1069
Eco105I TACGTA 1 cut(s) 67
Eco130I CCWWGG 2 cut(s) 27, 750
Eco24I GRGCYC 1 cut(s) 1071
Eco31I GGTCTC 1 cut(s) 613
Eco47I GGWCC 1 cut(s) 1152
Eco53kI GAGCTC 1 cut(s) 1069
Eco72I CACGTG 1 cut(s) 493
Eco88I CYCGRG 1 cut(s) 988
EcoICRI GAGCTC 1 cut(s) 1069
EcoRII CCWGG 4 cut(s) 313, 924, 981, 1437
EcoT14I CCWWGG 2 cut(s) 27, 750
EcoT38I GRGCYC 1 cut(s) 1071
ErhI CCWWGG 2 cut(s) 27, 750
Esp3I CGTCTC 1 cut(s) 105
FalI AAGNNNNNCTT 2 cut(s) 1344, 1376
FaqI GGGAC 1 cut(s) 1236
FauI CCCGC 1 cut(s) 1472
FblI GTMKAC 2 cut(s) 1139, 1383
Fnu4HI GCNGC 4 cut(s) 243, 417, 900, 1173
FokI GGATG 2 cut(s) 10, 1447
FriOI GRGCYC 1 cut(s) 1071
Fsp4HI GCNGC 4 cut(s) 243, 417, 900, 1173
FspBI CTAG 5 cut(s) 8, 657, 1098, 1443, 1540
GlaI GCGC 2 cut(s) 6, 1468
GluI GCNGC 4 cut(s) 243, 417, 900, 1173
GsaI CCCAGC 1 cut(s) 766
GsuI CTGGAG 3 cut(s) 20, 161, 700
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 5 cut(s) 212, 251, 756, 1026, 1401
HapII CCGG 4 cut(s) 217, 570, 1010, 1155
HgaI GACGC 3 cut(s) 369, 562, 891
HhaI GCGC 2 cut(s) 7, 1469
Hin1I GRCGYC 1 cut(s) 573
Hin6I GCGC 2 cut(s) 5, 1467
HinP1I GCGC 2 cut(s) 5, 1467
HincII GTYRAC 1 cut(s) 667
HindII GTYRAC 1 cut(s) 667
HinfI GANTC 9 cut(s) 124, 230, 272, 675, 695, 712, 722, 986, 1285
HpaII CCGG 4 cut(s) 217, 570, 1010, 1155
HphI GGTGA 2 cut(s) 1063, 1190
Hpy166II GTNNAC 4 cut(s) 288, 667, 1140, 1384
Hpy188I TCNGA 5 cut(s) 359, 409, 830, 947, 1059
Hpy188III TCNNGA 6 cut(s) 217, 478, 679, 951, 1150, 1512
Hpy8I GTNNAC 4 cut(s) 288, 667, 1140, 1384
Hpy99I CGWCG 7 cut(s) 119, 578, 620, 674, 824, 861, 1024
HpyAV CCTTC 5 cut(s) 218, 533, 803, 1084, 1345
HpyCH4III ACNGT 8 cut(s) 159, 323, 561, 692, 1117, 1267, 1273, 1297
HpyCH4IV ACGT 6 cut(s) 66, 117, 492, 618, 882, 966
HpyF10VI GCNNNNNNNGC 4 cut(s) 248, 648, 657, 899
HpyF3I CTNAG 4 cut(s) 724, 887, 1056, 1347
HpySE526I ACGT 6 cut(s) 66, 117, 492, 618, 882, 966
Hsp92I GRCGYC 1 cut(s) 573
HspAI GCGC 2 cut(s) 5, 1467
Kpn2I TCCGGA 1 cut(s) 216
Kzo9I GATC 6 cut(s) 376, 537, 947, 993, 1182, 1260
LguI GCTCTTC 1 cut(s) 930
LmnI GCTCC 1 cut(s) 1066
Lsp1109I GCAGC 3 cut(s) 254, 428, 1184
LweI GCATC 4 cut(s) 176, 471, 822, 1217
MaeI CTAG 5 cut(s) 8, 657, 1098, 1443, 1540
MaeII ACGT 6 cut(s) 66, 117, 492, 618, 882, 966
MaeIII GTNAC 7 cut(s) 10, 164, 619, 686, 1201, 1267, 1291
MalI GATC 6 cut(s) 378, 539, 949, 995, 1184, 1262
MboI GATC 6 cut(s) 376, 537, 947, 993, 1182, 1260
MboII GAAGA 5 cut(s) 86, 448, 947, 1247, 1490
MflI RGATCY 2 cut(s) 947, 993
MhlI GDGCHC 3 cut(s) 290, 895, 1071
MluCI AATT 3 cut(s) 970, 1366, 1494
MlyI GAGTC 4 cut(s) 133, 716, 980, 1279
MroI TCCGGA 1 cut(s) 216
MroXI GAANNNNTTC 1 cut(s) 711
MseI TTAA 4 cut(s) 131, 501, 851, 1416
MslI CAYNNNNRTG 2 cut(s) 75, 283
MspA1I CMGCKG 3 cut(s) 245, 762, 1130
MspI CCGG 4 cut(s) 217, 570, 1010, 1155
MspR9I CCNGG 5 cut(s) 315, 926, 983, 1010, 1439
Mva1269I GAATGC 2 cut(s) 333, 1114
MvaI CCWGG 4 cut(s) 315, 926, 983, 1439
MvnI CGCG 3 cut(s) 902, 1251, 1467
MwoI GCNNNNNNNGC 4 cut(s) 248, 648, 657, 899
NciI CCSGG 1 cut(s) 1010
NcoI CCATGG 1 cut(s) 27
NdeII GATC 6 cut(s) 376, 537, 947, 993, 1182, 1260
NheI GCTAGC 1 cut(s) 656
NlaIV GGNNCC 5 cut(s) 258, 468, 587, 1321, 1452
NmeAIII GCCGAG 1 cut(s) 277
NmuCI GTSAC 1 cut(s) 1291
NspI RCATGY 2 cut(s) 350, 434
PaeR7I CTCGAG 1 cut(s) 988
PagI TCATGA 1 cut(s) 477
PaqCI CACCTGC 1 cut(s) 1166
PasI CCCWGGG 1 cut(s) 314
PciSI GCTCTTC 1 cut(s) 930
PcsI WCGNNNNNNNCGW 2 cut(s) 114, 456
PctI GAATGC 2 cut(s) 333, 1114
PdmI GAANNNNTTC 1 cut(s) 711
PfeI GAWTC 5 cut(s) 230, 272, 675, 695, 712
PfoI TCCNGGA 1 cut(s) 981
PinAI ACCGGT 1 cut(s) 1154
PkrI GCNGC 4 cut(s) 244, 418, 901, 1174
Ple19I CGATCG 1 cut(s) 379
PleI GAGTC 4 cut(s) 132, 716, 980, 1279
PmaCI CACGTG 1 cut(s) 493
PmlI CACGTG 1 cut(s) 493
PpsI GAGTC 4 cut(s) 132, 716, 980, 1279
Ppu21I YACGTR 2 cut(s) 67, 493
PshAI GACNNNNGTC 3 cut(s) 1289, 1379, 1519
PsiI TTATAA 2 cut(s) 195, 1365
Psp124BI GAGCTC 1 cut(s) 1071
Psp6I CCWGG 4 cut(s) 313, 924, 981, 1437
PspCI CACGTG 1 cut(s) 493
PspFI CCCAGC 1 cut(s) 762
PspGI CCWGG 4 cut(s) 313, 924, 981, 1437
PspN4I GGNNCC 5 cut(s) 258, 468, 587, 1321, 1452
PspPI GGNCC 3 cut(s) 754, 1024, 1152
PspXI VCTCGAGB 1 cut(s) 988
PsuI RGATCY 2 cut(s) 947, 993
PvuI CGATCG 1 cut(s) 379
RsaI GTAC 5 cut(s) 65, 69, 320, 885, 1102
RsaNI GTAC 5 cut(s) 64, 68, 319, 884, 1101
RseI CAYNNNNRTG 2 cut(s) 75, 283
SacI GAGCTC 1 cut(s) 1071
SapI GCTCTTC 1 cut(s) 930
SaqAI TTAA 4 cut(s) 131, 501, 851, 1416
SatI GCNGC 4 cut(s) 243, 417, 900, 1173
Sau3AI GATC 6 cut(s) 376, 537, 947, 993, 1182, 1260
Sau96I GGNCC 3 cut(s) 754, 1024, 1152
SchI GAGTC 4 cut(s) 133, 716, 980, 1279
ScrFI CCNGG 5 cut(s) 315, 926, 983, 1010, 1439
SduI GDGCHC 3 cut(s) 290, 895, 1071
SfaNI GCATC 4 cut(s) 176, 471, 822, 1217
SfcI CTRYAG 1 cut(s) 557
Sfr274I CTCGAG 1 cut(s) 988
SinI GGWCC 1 cut(s) 1152
SlaI CTCGAG 1 cut(s) 988
SmiMI CAYNNNNRTG 2 cut(s) 75, 283
SmlI CTYRAG 2 cut(s) 988, 1196
SmoI CTYRAG 2 cut(s) 988, 1196
SnaBI TACGTA 1 cut(s) 67
SpeI ACTAGT 1 cut(s) 1097
Sse9I AATT 3 cut(s) 970, 1366, 1494
SsiI CCGC 5 cut(s) 245, 760, 900, 1128, 1465
SspMI CTAG 5 cut(s) 8, 657, 1098, 1443, 1540
SstI GAGCTC 1 cut(s) 1071
StyD4I CCNGG 5 cut(s) 313, 924, 981, 1008, 1437
StyI CCWWGG 2 cut(s) 27, 750
TaaI ACNGT 8 cut(s) 159, 323, 561, 692, 1117, 1267, 1273, 1297
TaiI ACGT 6 cut(s) 69, 120, 495, 621, 885, 969
TaqI TCGA 7 cut(s) 375, 379, 459, 536, 576, 989, 1513
TasI AATT 3 cut(s) 970, 1366, 1494
TatI WGTACW 1 cut(s) 1100
TauI GCSGC 1 cut(s) 902
TfiI GAWTC 5 cut(s) 230, 272, 675, 695, 712
Tru1I TTAA 4 cut(s) 131, 501, 851, 1416
Tru9I TTAA 4 cut(s) 131, 501, 851, 1416
TscAI CASTG 3 cut(s) 895, 1120, 1270
TseFI GTSAC 1 cut(s) 1291
TseI GCWGC 3 cut(s) 242, 416, 1172
Tsp45I GTSAC 1 cut(s) 1291
TspDTI ATGAA 8 cut(s) 87, 361, 466, 520, 704, 822, 1156, 1248
TspGWI ACGGA 7 cut(s) 117, 123, 183, 223, 687, 874, 1152
TspRI CASTG 3 cut(s) 895, 1120, 1270
VneI GTGCAC 1 cut(s) 286
VpaK11BI GGWCC 1 cut(s) 1152
XceI RCATGY 2 cut(s) 350, 434
XcmI CCANNNNNNNNNTGG 1 cut(s) 1394
XhoI CTCGAG 1 cut(s) 988
XmiI GTMKAC 2 cut(s) 1139, 1383
XmnI GAANNNNTTC 1 cut(s) 711
XspI CTAG 5 cut(s) 8, 657, 1098, 1443, 1540
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.