Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD02G1197100.v1.1 |
| prunus_persica | Prupe.2G150600_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr1g0351541 RchiOBHm_Chr5g0049221 |
| rosa_multiflora | Rmu_co8043636.1_g000001 Rmu_co8344733.1_g000001 Rmu_sc0003804.1_g000015 |
| rosa_roxburghii | Rroxscaffold_5G00377260 |
| rosa_samantha | Rh2BG413500 |
| rosa_wichuraiana | Rw0G020780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 439 |
| AcsI | RAATTY | 2 cut(s) | 71, 80 |
| AfaI | GTAC | 1 cut(s) | 431 |
| AluBI | AGCT | 2 cut(s) | 181, 466 |
| AluI | AGCT | 2 cut(s) | 181, 466 |
| Alw26I | GTCTC | 2 cut(s) | 26, 265 |
| ApeKI | GCWGC | 2 cut(s) | 185, 441 |
| ApoI | RAATTY | 2 cut(s) | 71, 80 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 158 |
| AsuHPI | GGTGA | 1 cut(s) | 428 |
| AxyI | CCTNAGG | 1 cut(s) | 402 |
| BanII | GRGCYC | 1 cut(s) | 17 |
| BbvI | GCAGC | 2 cut(s) | 197, 453 |
| BccI | CCATC | 1 cut(s) | 4 |
| BceAI | ACGGC | 2 cut(s) | 127, 433 |
| BclI | TGATCA | 1 cut(s) | 243 |
| BcoDI | GTCTC | 2 cut(s) | 26, 265 |
| BisI | GCNGC | 2 cut(s) | 186, 442 |
| BlsI | GCNGC | 2 cut(s) | 187, 443 |
| BmiI | GGNNCC | 1 cut(s) | 307 |
| BmsI | GCATC | 3 cut(s) | 187, 352, 430 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 342, 372 |
| Bse21I | CCTNAGG | 1 cut(s) | 402 |
| Bse3DI | GCAATG | 1 cut(s) | 416 |
| BseGI | GGATG | 3 cut(s) | 15, 367, 379 |
| BseMI | GCAATG | 1 cut(s) | 416 |
| BseRI | GAGGAG | 2 cut(s) | 44, 363 |
| BseXI | GCAGC | 2 cut(s) | 197, 453 |
| BsgI | GTGCAG | 1 cut(s) | 353 |
| BsmAI | GTCTC | 2 cut(s) | 26, 265 |
| Bsp1286I | GDGCHC | 1 cut(s) | 17 |
| Bsp143I | GATC | 1 cut(s) | 243 |
| BspACI | CCGC | 1 cut(s) | 439 |
| BspLI | GGNNCC | 1 cut(s) | 307 |
| BsrDI | GCAATG | 1 cut(s) | 416 |
| BssMI | GATC | 1 cut(s) | 243 |
| Bst4CI | ACNGT | 2 cut(s) | 194, 434 |
| BstC8I | GCNNGC | 3 cut(s) | 183, 367, 446 |
| BstDEI | CTNAG | 2 cut(s) | 50, 402 |
| BstF5I | GGATG | 3 cut(s) | 15, 367, 379 |
| BstKTI | GATC | 1 cut(s) | 246 |
| BstMAI | GTCTC | 2 cut(s) | 26, 265 |
| BstMBI | GATC | 1 cut(s) | 243 |
| BstV1I | GCAGC | 2 cut(s) | 197, 453 |
| Bsu36I | CCTNAGG | 1 cut(s) | 402 |
| BtsCI | GGATG | 3 cut(s) | 15, 367, 379 |
| BtsI | GCAGTG | 1 cut(s) | 341 |
| BtsIMutI | CAGTG | 2 cut(s) | 199, 341 |
| Cac8I | GCNNGC | 3 cut(s) | 183, 367, 446 |
| Csp6I | GTAC | 1 cut(s) | 430 |
| CviAII | CATG | 2 cut(s) | 241, 460 |
| CviQI | GTAC | 1 cut(s) | 430 |
| DdeI | CTNAG | 2 cut(s) | 50, 402 |
| DpnI | GATC | 1 cut(s) | 245 |
| DpnII | GATC | 1 cut(s) | 243 |
| Eco24I | GRGCYC | 1 cut(s) | 17 |
| Eco81I | CCTNAGG | 1 cut(s) | 402 |
| EcoT38I | GRGCYC | 1 cut(s) | 17 |
| FaeI | CATG | 2 cut(s) | 244, 463 |
| FaiI | YATR | 6 cut(s) | 60, 190, 242, 426, 428, 461 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 395, 427, 437, 469 |
| FatI | CATG | 2 cut(s) | 240, 459 |
| FauNDI | CATATG | 1 cut(s) | 426 |
| FbaI | TGATCA | 1 cut(s) | 243 |
| Fnu4HI | GCNGC | 2 cut(s) | 186, 442 |
| FokI | GGATG | 3 cut(s) | 22, 374, 386 |
| FriOI | GRGCYC | 1 cut(s) | 17 |
| Fsp4HI | GCNGC | 2 cut(s) | 186, 442 |
| GluI | GCNGC | 2 cut(s) | 186, 442 |
| Hin1II | CATG | 2 cut(s) | 244, 463 |
| HindIII | AAGCTT | 1 cut(s) | 464 |
| HphI | GGTGA | 1 cut(s) | 428 |
| Hpy188I | TCNGA | 1 cut(s) | 87 |
| HpyAV | CCTTC | 2 cut(s) | 94, 316 |
| HpyCH4III | ACNGT | 2 cut(s) | 194, 434 |
| HpyCH4V | TGCA | 7 cut(s) | 69, 185, 218, 266, 334, 416, 421 |
| HpyF3I | CTNAG | 2 cut(s) | 50, 402 |
| Hsp92II | CATG | 2 cut(s) | 244, 463 |
| Ksp22I | TGATCA | 1 cut(s) | 243 |
| Kzo9I | GATC | 1 cut(s) | 243 |
| LmnI | GCTCC | 2 cut(s) | 132, 305 |
| LpnPI | CCDG | 4 cut(s) | 3, 39, 351, 405 |
| Lsp1109I | GCAGC | 2 cut(s) | 197, 453 |
| LweI | GCATC | 3 cut(s) | 187, 352, 430 |
| MaeIII | GTNAC | 1 cut(s) | 434 |
| MalI | GATC | 1 cut(s) | 245 |
| MboI | GATC | 1 cut(s) | 243 |
| MboII | GAAGA | 1 cut(s) | 285 |
| MhlI | GDGCHC | 1 cut(s) | 17 |
| MluCI | AATT | 3 cut(s) | 71, 80, 484 |
| MnlI | CCTC | 5 cut(s) | 22, 50, 86, 212, 341 |
| MroXI | GAANNNNTTC | 1 cut(s) | 158 |
| MseI | TTAA | 1 cut(s) | 291 |
| NdeI | CATATG | 1 cut(s) | 426 |
| NdeII | GATC | 1 cut(s) | 243 |
| NlaIII | CATG | 2 cut(s) | 244, 463 |
| NlaIV | GGNNCC | 1 cut(s) | 307 |
| NmuCI | GTSAC | 1 cut(s) | 434 |
| PdmI | GAANNNNTTC | 1 cut(s) | 158 |
| PkrI | GCNGC | 2 cut(s) | 187, 443 |
| PspN4I | GGNNCC | 1 cut(s) | 307 |
| RsaI | GTAC | 1 cut(s) | 431 |
| RsaNI | GTAC | 1 cut(s) | 430 |
| SaqAI | TTAA | 1 cut(s) | 291 |
| SatI | GCNGC | 2 cut(s) | 186, 442 |
| Sau3AI | GATC | 1 cut(s) | 243 |
| SduI | GDGCHC | 1 cut(s) | 17 |
| SetI | ASST | 4 cut(s) | 105, 159, 183, 468 |
| SfaNI | GCATC | 3 cut(s) | 187, 352, 430 |
| Sse9I | AATT | 3 cut(s) | 71, 80, 484 |
| SsiI | CCGC | 1 cut(s) | 439 |
| TaaI | ACNGT | 2 cut(s) | 194, 434 |
| TaqI | TCGA | 1 cut(s) | 152 |
| TasI | AATT | 3 cut(s) | 71, 80, 484 |
| TatI | WGTACW | 1 cut(s) | 429 |
| Tru1I | TTAA | 1 cut(s) | 291 |
| Tru9I | TTAA | 1 cut(s) | 291 |
| TscAI | CASTG | 2 cut(s) | 199, 341 |
| TseFI | GTSAC | 1 cut(s) | 434 |
| TseI | GCWGC | 2 cut(s) | 185, 441 |
| Tsp45I | GTSAC | 1 cut(s) | 434 |
| TspDTI | ATGAA | 1 cut(s) | 476 |
| TspRI | CASTG | 2 cut(s) | 199, 341 |
| XapI | RAATTY | 2 cut(s) | 71, 80 |
| XmnI | GAANNNNTTC | 1 cut(s) | 158 |