Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD02G1197100.v1.1 |
| prunus_persica | Prupe.2G150600_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr1g0351541 RchiOBHm_Chr5g0049221 |
| rosa_multiflora | Rmu_co8043636.1_g000001 Rmu_co8344733.1_g000001 Rmu_sc0003804.1_g000015 |
| rosa_roxburghii | Rroxscaffold_5G00377260 |
| rosa_samantha | Rh2BG413500 |
| rosa_wichuraiana | Rw0G020780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 112 |
| AfaI | GTAC | 1 cut(s) | 104 |
| AluBI | AGCT | 1 cut(s) | 139 |
| AluI | AGCT | 1 cut(s) | 139 |
| ApeKI | GCWGC | 1 cut(s) | 114 |
| AsuHPI | GGTGA | 1 cut(s) | 101 |
| AxyI | CCTNAGG | 1 cut(s) | 75 |
| BbvI | GCAGC | 1 cut(s) | 126 |
| BceAI | ACGGC | 1 cut(s) | 106 |
| BisI | GCNGC | 1 cut(s) | 115 |
| BlsI | GCNGC | 1 cut(s) | 116 |
| BmsI | GCATC | 2 cut(s) | 25, 103 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 15, 45 |
| Bse21I | CCTNAGG | 1 cut(s) | 75 |
| Bse3DI | GCAATG | 1 cut(s) | 89 |
| BseGI | GGATG | 2 cut(s) | 40, 52 |
| BseMI | GCAATG | 1 cut(s) | 89 |
| BseRI | GAGGAG | 1 cut(s) | 36 |
| BseXI | GCAGC | 1 cut(s) | 126 |
| BsgI | GTGCAG | 1 cut(s) | 26 |
| BspACI | CCGC | 1 cut(s) | 112 |
| BsrDI | GCAATG | 1 cut(s) | 89 |
| Bst4CI | ACNGT | 1 cut(s) | 107 |
| BstC8I | GCNNGC | 2 cut(s) | 40, 119 |
| BstDEI | CTNAG | 1 cut(s) | 75 |
| BstF5I | GGATG | 2 cut(s) | 40, 52 |
| BstV1I | GCAGC | 1 cut(s) | 126 |
| Bsu36I | CCTNAGG | 1 cut(s) | 75 |
| BtsCI | GGATG | 2 cut(s) | 40, 52 |
| BtsI | GCAGTG | 1 cut(s) | 14 |
| BtsIMutI | CAGTG | 1 cut(s) | 14 |
| Cac8I | GCNNGC | 2 cut(s) | 40, 119 |
| Csp6I | GTAC | 1 cut(s) | 103 |
| CviAII | CATG | 1 cut(s) | 133 |
| CviJI | RGCY | 5 cut(s) | 42, 64, 121, 139, 154 |
| CviKI_1 | RGCY | 5 cut(s) | 42, 64, 121, 139, 154 |
| CviQI | GTAC | 1 cut(s) | 103 |
| DdeI | CTNAG | 1 cut(s) | 75 |
| Eco81I | CCTNAGG | 1 cut(s) | 75 |
| FaeI | CATG | 1 cut(s) | 136 |
| FaiI | YATR | 3 cut(s) | 99, 101, 134 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 68, 100, 110, 142 |
| FatI | CATG | 1 cut(s) | 132 |
| FauNDI | CATATG | 1 cut(s) | 99 |
| Fnu4HI | GCNGC | 1 cut(s) | 115 |
| FokI | GGATG | 2 cut(s) | 47, 59 |
| Fsp4HI | GCNGC | 1 cut(s) | 115 |
| GluI | GCNGC | 1 cut(s) | 115 |
| Hin1II | CATG | 1 cut(s) | 136 |
| HindIII | AAGCTT | 1 cut(s) | 137 |
| HphI | GGTGA | 1 cut(s) | 101 |
| HpyCH4III | ACNGT | 1 cut(s) | 107 |
| HpyCH4V | TGCA | 3 cut(s) | 7, 89, 94 |
| HpyF3I | CTNAG | 1 cut(s) | 75 |
| Hsp92II | CATG | 1 cut(s) | 136 |
| LpnPI | CCDG | 2 cut(s) | 24, 78 |
| Lsp1109I | GCAGC | 1 cut(s) | 126 |
| LweI | GCATC | 2 cut(s) | 25, 103 |
| MaeIII | GTNAC | 1 cut(s) | 107 |
| MluCI | AATT | 1 cut(s) | 157 |
| MnlI | CCTC | 1 cut(s) | 14 |
| NdeI | CATATG | 1 cut(s) | 99 |
| NlaIII | CATG | 1 cut(s) | 136 |
| NmuCI | GTSAC | 1 cut(s) | 107 |
| PkrI | GCNGC | 1 cut(s) | 116 |
| RsaI | GTAC | 1 cut(s) | 104 |
| RsaNI | GTAC | 1 cut(s) | 103 |
| SatI | GCNGC | 1 cut(s) | 115 |
| SetI | ASST | 1 cut(s) | 141 |
| SfaNI | GCATC | 2 cut(s) | 25, 103 |
| SgeI | CNNG | 6 cut(s) | 32, 51, 55, 77, 130, 145 |
| Sse9I | AATT | 1 cut(s) | 157 |
| SsiI | CCGC | 1 cut(s) | 112 |
| TaaI | ACNGT | 1 cut(s) | 107 |
| TasI | AATT | 1 cut(s) | 157 |
| TatI | WGTACW | 1 cut(s) | 102 |
| TscAI | CASTG | 1 cut(s) | 14 |
| TseFI | GTSAC | 1 cut(s) | 107 |
| TseI | GCWGC | 1 cut(s) | 114 |
| Tsp45I | GTSAC | 1 cut(s) | 107 |
| TspDTI | ATGAA | 1 cut(s) | 149 |
| TspRI | CASTG | 1 cut(s) | 14 |