Anaphase-promoting complex subunit
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G48150 AT3G48150 |
| fragaria_vesca | FvH4_5g16310 FvH4_5g16310 |
| malus_domestica | MD06G1182000.v1.1 MD13G1029000.v1.1 MD14G1188000.v1.1 MD17G1271900.v1.1 MD17G1272000.v1.1 |
| prunus_persica | Prupe.5G180200_v2.0.a1 |
| pyrus_communis | pycom06g16100 pycom14g15910 |
| rosa_chinensis | RchiOBHm_Chr7g0179821 |
| rosa_laevigata | RLG00000005321 |
| rosa_multiflora | Rmu_sc0001754.1_g000005 Rmu_sc0004156.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00273440 |
| rosa_rugosa | Rorug06G0428500 |
| rosa_samantha | Rh7AG028300 Rh7BG027200 Rh7CG029200 Rh7DG028700 |
| rosa_wichuraiana | Rw7G002260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 63 |
| AccBSI | CCGCTC | 1 cut(s) | 345 |
| AccI | GTMKAC | 2 cut(s) | 392, 1767 |
| AccII | CGCG | 4 cut(s) | 192, 197, 233, 315 |
| AccIII | TCCGGA | 1 cut(s) | 1440 |
| AclWI | GGATC | 2 cut(s) | 674, 1665 |
| AcoI | YGGCCR | 4 cut(s) | 279, 294, 444, 1621 |
| AcsI | RAATTY | 4 cut(s) | 66, 1007, 1026, 1295 |
| AcyI | GRCGYC | 1 cut(s) | 365 |
| AfaI | GTAC | 7 cut(s) | 673, 695, 745, 995, 1232, 1627, 1774 |
| AfeI | AGCGCT | 1 cut(s) | 1877 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 374, 1447, 1783, 1804 |
| AgsI | TTSAA | 6 cut(s) | 166, 835, 1022, 1034, 1706, 1754 |
| AjnI | CCWGG | 1 cut(s) | 546 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 290, 322 |
| Alw21I | GWGCWC | 6 cut(s) | 189, 273, 323, 714, 818, 1858 |
| Alw26I | GTCTC | 3 cut(s) | 35, 227, 851 |
| Alw44I | GTGCAC | 1 cut(s) | 814 |
| AlwI | GGATC | 2 cut(s) | 674, 1665 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 11, 1325 |
| Aor13HI | TCCGGA | 1 cut(s) | 1440 |
| Aor51HI | AGCGCT | 1 cut(s) | 1877 |
| AoxI | GGCC | 6 cut(s) | 279, 294, 444, 703, 1621, 1795 |
| ApaLI | GTGCAC | 1 cut(s) | 814 |
| ApeKI | GCWGC | 8 cut(s) | 72, 75, 482, 531, 802, 1210, 1322, 1556 |
| ApoI | RAATTY | 4 cut(s) | 66, 1007, 1026, 1295 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 869, 1038 |
| AspLEI | GCGC | 4 cut(s) | 194, 315, 531, 1878 |
| AspS9I | GGNCC | 4 cut(s) | 593, 1278, 1691, 1796 |
| AsuC2I | CCSGG | 2 cut(s) | 278, 1799 |
| AsuNHI | GCTAGC | 1 cut(s) | 1597 |
| AvaII | GGWCC | 3 cut(s) | 593, 1278, 1691 |
| BaeGI | GKGCMC | 2 cut(s) | 818, 1246 |
| BalI | TGGCCA | 1 cut(s) | 446 |
| BanII | GRGCYC | 2 cut(s) | 189, 323 |
| Bbv12I | GWGCWC | 6 cut(s) | 189, 273, 323, 714, 818, 1858 |
| BbvI | GCAGC | 8 cut(s) | 84, 87, 469, 518, 789, 1197, 1309, 1568 |
| BccI | CCATC | 3 cut(s) | 574, 1402, 1663 |
| BceAI | ACGGC | 2 cut(s) | 442, 1608 |
| BciT130I | CCWGG | 1 cut(s) | 548 |
| BclI | TGATCA | 2 cut(s) | 499, 1510 |
| BcnI | CCSGG | 2 cut(s) | 278, 1799 |
| BcoDI | GTCTC | 3 cut(s) | 35, 227, 851 |
| BfaI | CTAG | 3 cut(s) | 599, 1016, 1598 |
| BfmI | CTRYAG | 3 cut(s) | 803, 819, 1347 |
| BfoI | RGCGCY | 1 cut(s) | 1879 |
| BfuAI | ACCTGC | 1 cut(s) | 63 |
| BglII | AGATCT | 1 cut(s) | 1036 |
| Bme1390I | CCNGG | 3 cut(s) | 278, 548, 1799 |
| Bme18I | GGWCC | 3 cut(s) | 593, 1278, 1691 |
| BmgT120I | GGNCC | 4 cut(s) | 593, 1278, 1691, 1796 |
| BmiI | GGNNCC | 3 cut(s) | 594, 734, 1280 |
| BmrFI | CCNGG | 3 cut(s) | 278, 548, 1799 |
| BmsI | GCATC | 3 cut(s) | 189, 273, 894 |
| BmtI | GCTAGC | 1 cut(s) | 1601 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 344, 376 |
| BpmI | CTGGAG | 4 cut(s) | 307, 331, 573, 1682 |
| BpuEI | CTTGAG | 1 cut(s) | 608 |
| BpuMI | CCSGG | 2 cut(s) | 278, 1799 |
| Bsa29I | ATCGAT | 2 cut(s) | 155, 1580 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1356 |
| BsaHI | GRCGYC | 1 cut(s) | 365 |
| BsaI | GGTCTC | 1 cut(s) | 35 |
| BsaJI | CCNNGG | 2 cut(s) | 776, 1488 |
| BsaWI | WCCGGW | 1 cut(s) | 1440 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1840, 1870 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 374, 1447, 1783, 1804 |
| Bse118I | RCCGGY | 3 cut(s) | 292, 374, 1793 |
| Bse1I | ACTGG | 6 cut(s) | 261, 633, 788, 991, 1257, 1855 |
| Bse3DI | GCAATG | 2 cut(s) | 733, 1542 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1356 |
| BseAI | TCCGGA | 1 cut(s) | 1440 |
| BseBI | CCWGG | 1 cut(s) | 548 |
| BseCI | ATCGAT | 2 cut(s) | 155, 1580 |
| BseDI | CCNNGG | 2 cut(s) | 776, 1488 |
| BseGI | GGATG | 3 cut(s) | 867, 909, 1674 |
| BseJI | GATNNNNATC | 1 cut(s) | 1356 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 374, 1447, 1783, 1804 |
| BseMI | GCAATG | 2 cut(s) | 733, 1542 |
| BseMII | CTCAG | 4 cut(s) | 132, 989, 1057, 1112 |
| BseNI | ACTGG | 6 cut(s) | 261, 633, 788, 991, 1257, 1855 |
| BseRI | GAGGAG | 1 cut(s) | 422 |
| BseSI | GKGCMC | 2 cut(s) | 818, 1246 |
| BseXI | GCAGC | 8 cut(s) | 84, 87, 469, 518, 789, 1197, 1309, 1568 |
| BsgI | GTGCAG | 1 cut(s) | 1101 |
| Bsh1236I | CGCG | 4 cut(s) | 192, 197, 233, 315 |
| Bsh1285I | CGRYCG | 1 cut(s) | 217 |
| BshFI | GGCC | 6 cut(s) | 281, 296, 446, 705, 1623, 1797 |
| BshVI | ATCGAT | 2 cut(s) | 155, 1580 |
| BsiEI | CGRYCG | 1 cut(s) | 217 |
| BsiHKAI | GWGCWC | 6 cut(s) | 189, 273, 323, 714, 818, 1858 |
| BsiSI | CCGG | 7 cut(s) | 278, 293, 334, 375, 1441, 1794, 1799 |
| BslFI | GGGAC | 1 cut(s) | 606 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 374, 1447, 1783, 1804 |
| BsmAI | GTCTC | 3 cut(s) | 35, 227, 851 |
| BsmFI | GGGAC | 1 cut(s) | 606 |
| BsmI | GAATGC | 2 cut(s) | 327, 793 |
| BsnI | GGCC | 6 cut(s) | 281, 296, 446, 705, 1623, 1797 |
| Bso31I | GGTCTC | 1 cut(s) | 35 |
| Bsp1286I | GDGCHC | 7 cut(s) | 189, 273, 323, 714, 818, 1246, 1858 |
| Bsp13I | TCCGGA | 1 cut(s) | 1440 |
| Bsp143I | GATC | 8 cut(s) | 214, 499, 679, 1012, 1036, 1510, 1615, 1657 |
| Bsp19I | CCATGG | 1 cut(s) | 1488 |
| BspANI | GGCC | 6 cut(s) | 281, 296, 446, 705, 1623, 1797 |
| BspCNI | CTCAG | 4 cut(s) | 133, 988, 1056, 1113 |
| BspDI | ATCGAT | 2 cut(s) | 155, 1580 |
| BspEI | TCCGGA | 1 cut(s) | 1440 |
| BspFNI | CGCG | 4 cut(s) | 192, 197, 233, 315 |
| BspHI | TCATGA | 1 cut(s) | 1291 |
| BspLI | GGNNCC | 3 cut(s) | 594, 734, 1280 |
| BspMAI | CTGCAG | 1 cut(s) | 807 |
| BspMI | ACCTGC | 1 cut(s) | 63 |
| BspOI | GCTAGC | 1 cut(s) | 1601 |
| BspPI | GGATC | 2 cut(s) | 674, 1665 |
| BspQI | GCTCTTC | 3 cut(s) | 472, 498, 1434 |
| BspTNI | GGTCTC | 1 cut(s) | 35 |
| BsrBI | CCGCTC | 1 cut(s) | 345 |
| BsrDI | GCAATG | 2 cut(s) | 733, 1542 |
| BsrFI | RCCGGY | 3 cut(s) | 292, 374, 1793 |
| BsrI | ACTGG | 6 cut(s) | 261, 633, 788, 991, 1257, 1855 |
| BssAI | RCCGGY | 3 cut(s) | 292, 374, 1793 |
| BssECI | CCNNGG | 2 cut(s) | 776, 1488 |
| BssMI | GATC | 8 cut(s) | 214, 499, 679, 1012, 1036, 1510, 1615, 1657 |
| BssNI | GRCGYC | 1 cut(s) | 365 |
| BssT1I | CCWWGG | 2 cut(s) | 776, 1488 |
| Bst2UI | CCWGG | 1 cut(s) | 548 |
| Bst4CI | ACNGT | 7 cut(s) | 13, 92, 693, 748, 823, 998, 1772 |
| Bst6I | CTCTTC | 6 cut(s) | 472, 498, 1434, 1626, 1674, 1718 |
| BstACI | GRCGYC | 1 cut(s) | 365 |
| BstC8I | GCNNGC | 5 cut(s) | 206, 294, 376, 1344, 1599 |
| BstDEI | CTNAG | 8 cut(s) | 141, 842, 899, 975, 1043, 1121, 1602, 1826 |
| BstDSI | CCRYGG | 1 cut(s) | 1488 |
| BstF5I | GGATG | 3 cut(s) | 867, 909, 1674 |
| BstFNI | CGCG | 4 cut(s) | 192, 197, 233, 315 |
| BstH2I | RGCGCY | 1 cut(s) | 1879 |
| BstHHI | GCGC | 4 cut(s) | 194, 315, 531, 1878 |
| BstKTI | GATC | 8 cut(s) | 217, 502, 682, 1015, 1039, 1513, 1618, 1660 |
| BstMAI | GTCTC | 3 cut(s) | 35, 227, 851 |
| BstMBI | GATC | 8 cut(s) | 214, 499, 679, 1012, 1036, 1510, 1615, 1657 |
| BstMCI | CGRYCG | 1 cut(s) | 217 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 112, 115, 488, 980, 1331 |
| BstNI | CCWGG | 1 cut(s) | 548 |
| BstNSI | RCATGY | 2 cut(s) | 122, 1346 |
| BstSCI | CCNGG | 3 cut(s) | 276, 546, 1797 |
| BstSFI | CTRYAG | 3 cut(s) | 803, 819, 1347 |
| BstSLI | GKGCMC | 2 cut(s) | 818, 1246 |
| BstUI | CGCG | 4 cut(s) | 192, 197, 233, 315 |
| BstV1I | GCAGC | 8 cut(s) | 84, 87, 469, 518, 789, 1197, 1309, 1568 |
| BstX2I | RGATCY | 2 cut(s) | 1036, 1657 |
| BstYI | RGATCY | 2 cut(s) | 1036, 1657 |
| Bsu15I | ATCGAT | 2 cut(s) | 155, 1580 |
| BsuRI | GGCC | 6 cut(s) | 281, 296, 446, 705, 1623, 1797 |
| BsuTUI | ATCGAT | 2 cut(s) | 155, 1580 |
| BtgI | CCRYGG | 1 cut(s) | 1488 |
| BtsCI | GGATG | 3 cut(s) | 867, 909, 1674 |
| BtsIMutI | CAGTG | 2 cut(s) | 138, 1118 |
| BveI | ACCTGC | 1 cut(s) | 63 |
| Cac8I | GCNNGC | 5 cut(s) | 206, 294, 376, 1344, 1599 |
| CaiI | CAGNNNCTG | 2 cut(s) | 11, 1325 |
| CciI | TCATGA | 1 cut(s) | 1291 |
| CfoI | GCGC | 4 cut(s) | 194, 315, 531, 1878 |
| Cfr10I | RCCGGY | 3 cut(s) | 292, 374, 1793 |
| Cfr13I | GGNCC | 4 cut(s) | 593, 1278, 1691, 1796 |
| ClaI | ATCGAT | 2 cut(s) | 155, 1580 |
| CseI | GACGC | 3 cut(s) | 222, 373, 1340 |
| Csp6I | GTAC | 7 cut(s) | 672, 694, 744, 994, 1231, 1626, 1773 |
| CviAII | CATG | 8 cut(s) | 119, 488, 941, 1072, 1214, 1292, 1343, 1489 |
| CviQI | GTAC | 7 cut(s) | 672, 694, 744, 994, 1231, 1626, 1773 |
| DdeI | CTNAG | 8 cut(s) | 141, 842, 899, 975, 1043, 1121, 1602, 1826 |
| DpnI | GATC | 8 cut(s) | 216, 501, 681, 1014, 1038, 1512, 1617, 1659 |
| DpnII | GATC | 8 cut(s) | 214, 499, 679, 1012, 1036, 1510, 1615, 1657 |
| EaeI | YGGCCR | 4 cut(s) | 279, 294, 444, 1621 |
| Eam1104I | CTCTTC | 6 cut(s) | 472, 498, 1434, 1626, 1674, 1718 |
| EarI | CTCTTC | 6 cut(s) | 472, 498, 1434, 1626, 1674, 1718 |
| Ecl136II | GAGCTC | 2 cut(s) | 187, 321 |
| Eco130I | CCWWGG | 2 cut(s) | 776, 1488 |
| Eco24I | GRGCYC | 2 cut(s) | 189, 323 |
| Eco31I | GGTCTC | 1 cut(s) | 35 |
| Eco47I | GGWCC | 3 cut(s) | 593, 1278, 1691 |
| Eco47III | AGCGCT | 1 cut(s) | 1877 |
| Eco53kI | GAGCTC | 2 cut(s) | 187, 321 |
| EcoICRI | GAGCTC | 2 cut(s) | 187, 321 |
| EcoO109I | RGGNCCY | 1 cut(s) | 593 |
| EcoRII | CCWGG | 1 cut(s) | 546 |
| EcoT14I | CCWWGG | 2 cut(s) | 776, 1488 |
| EcoT38I | GRGCYC | 2 cut(s) | 189, 323 |
| ErhI | CCWWGG | 2 cut(s) | 776, 1488 |
| FaeI | CATG | 8 cut(s) | 122, 491, 944, 1075, 1217, 1295, 1346, 1492 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 440, 472, 857, 889 |
| FaqI | GGGAC | 1 cut(s) | 606 |
| FatI | CATG | 8 cut(s) | 118, 487, 940, 1071, 1213, 1291, 1342, 1488 |
| FauI | CCCGC | 2 cut(s) | 238, 308 |
| FbaI | TGATCA | 2 cut(s) | 499, 1510 |
| FblI | GTMKAC | 2 cut(s) | 392, 1767 |
| FokI | GGATG | 3 cut(s) | 874, 916, 1681 |
| FriOI | GRGCYC | 2 cut(s) | 189, 323 |
| FspBI | CTAG | 3 cut(s) | 599, 1016, 1598 |
| GlaI | GCGC | 4 cut(s) | 193, 314, 530, 1877 |
| GsuI | CTGGAG | 4 cut(s) | 307, 331, 573, 1682 |
| HaeII | RGCGCY | 1 cut(s) | 1879 |
| HaeIII | GGCC | 6 cut(s) | 281, 296, 446, 705, 1623, 1797 |
| HapII | CCGG | 7 cut(s) | 278, 293, 334, 375, 1441, 1794, 1799 |
| HgaI | GACGC | 3 cut(s) | 222, 373, 1340 |
| HhaI | GCGC | 4 cut(s) | 194, 315, 531, 1878 |
| Hin1I | GRCGYC | 1 cut(s) | 365 |
| Hin1II | CATG | 8 cut(s) | 122, 491, 944, 1075, 1217, 1295, 1346, 1492 |
| Hin6I | GCGC | 4 cut(s) | 192, 313, 529, 1876 |
| HinP1I | GCGC | 4 cut(s) | 192, 313, 529, 1876 |
| HincII | GTYRAC | 3 cut(s) | 393, 826, 1330 |
| HindII | GTYRAC | 3 cut(s) | 393, 826, 1330 |
| HindIII | AAGCTT | 1 cut(s) | 1395 |
| HpaII | CCGG | 7 cut(s) | 278, 293, 334, 375, 1441, 1794, 1799 |
| Hpy188I | TCNGA | 4 cut(s) | 7, 399, 978, 1362 |
| Hpy188III | TCNNGA | 8 cut(s) | 361, 497, 623, 832, 1045, 1292, 1441, 1661 |
| Hpy99I | CGWCG | 1 cut(s) | 367 |
| HpyAV | CCTTC | 6 cut(s) | 449, 859, 1016, 1648, 1682, 1869 |
| HpyCH4III | ACNGT | 7 cut(s) | 13, 92, 693, 748, 823, 998, 1772 |
| HpyCH4V | TGCA | 9 cut(s) | 465, 805, 816, 907, 983, 1100, 1118, 1179, 1213 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 112, 115, 488, 980, 1331 |
| HpyF3I | CTNAG | 8 cut(s) | 141, 842, 899, 975, 1043, 1121, 1602, 1826 |
| Hsp92I | GRCGYC | 1 cut(s) | 365 |
| Hsp92II | CATG | 8 cut(s) | 122, 491, 944, 1075, 1217, 1295, 1346, 1492 |
| HspAI | GCGC | 4 cut(s) | 192, 313, 529, 1876 |
| Kpn2I | TCCGGA | 1 cut(s) | 1440 |
| KroI | GCCGGC | 2 cut(s) | 292, 374 |
| KroNI | GCCGGC | 2 cut(s) | 294, 376 |
| Ksp22I | TGATCA | 2 cut(s) | 499, 1510 |
| Kzo9I | GATC | 8 cut(s) | 214, 499, 679, 1012, 1036, 1510, 1615, 1657 |
| LguI | GCTCTTC | 3 cut(s) | 472, 498, 1434 |
| LmnI | GCTCC | 6 cut(s) | 83, 192, 318, 326, 350, 1861 |
| Lsp1109I | GCAGC | 8 cut(s) | 84, 87, 469, 518, 789, 1197, 1309, 1568 |
| LweI | GCATC | 3 cut(s) | 189, 273, 894 |
| MaeI | CTAG | 3 cut(s) | 599, 1016, 1598 |
| MaeIII | GTNAC | 3 cut(s) | 82, 1124, 1544 |
| MalI | GATC | 8 cut(s) | 216, 501, 681, 1014, 1038, 1512, 1617, 1659 |
| MbiI | CCGCTC | 1 cut(s) | 345 |
| MboI | GATC | 8 cut(s) | 214, 499, 679, 1012, 1036, 1510, 1615, 1657 |
| MflI | RGATCY | 2 cut(s) | 1036, 1657 |
| MhlI | GDGCHC | 7 cut(s) | 189, 273, 323, 714, 818, 1246, 1858 |
| MlsI | TGGCCA | 1 cut(s) | 446 |
| MluNI | TGGCCA | 1 cut(s) | 446 |
| MlyI | GAGTC | 2 cut(s) | 388, 767 |
| MmeI | TCCRAC | 1 cut(s) | 153 |
| Mox20I | TGGCCA | 1 cut(s) | 446 |
| MroI | TCCGGA | 1 cut(s) | 1440 |
| MroNI | GCCGGC | 2 cut(s) | 292, 374 |
| MroXI | GAANNNNTTC | 2 cut(s) | 869, 1038 |
| MscI | TGGCCA | 1 cut(s) | 446 |
| MseI | TTAA | 3 cut(s) | 765, 1202, 1607 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1076 |
| Msp20I | TGGCCA | 1 cut(s) | 446 |
| MspA1I | CMGCKG | 1 cut(s) | 1322 |
| MspI | CCGG | 7 cut(s) | 278, 293, 334, 375, 1441, 1794, 1799 |
| MspR9I | CCNGG | 3 cut(s) | 278, 548, 1799 |
| Mva1269I | GAATGC | 2 cut(s) | 327, 793 |
| MvaI | CCWGG | 1 cut(s) | 548 |
| MvnI | CGCG | 4 cut(s) | 192, 197, 233, 315 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 112, 115, 488, 980, 1331 |
| NaeI | GCCGGC | 2 cut(s) | 294, 376 |
| NciI | CCSGG | 2 cut(s) | 278, 1799 |
| NcoI | CCATGG | 1 cut(s) | 1488 |
| NdeII | GATC | 8 cut(s) | 214, 499, 679, 1012, 1036, 1510, 1615, 1657 |
| NgoMIV | GCCGGC | 2 cut(s) | 292, 374 |
| NheI | GCTAGC | 1 cut(s) | 1597 |
| NlaIII | CATG | 8 cut(s) | 122, 491, 944, 1075, 1217, 1295, 1346, 1492 |
| NlaIV | GGNNCC | 3 cut(s) | 594, 734, 1280 |
| NmuCI | GTSAC | 1 cut(s) | 82 |
| NspI | RCATGY | 2 cut(s) | 122, 1346 |
| PaeI | GCATGC | 1 cut(s) | 1346 |
| PagI | TCATGA | 1 cut(s) | 1291 |
| PciSI | GCTCTTC | 3 cut(s) | 472, 498, 1434 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 389 |
| PctI | GAATGC | 2 cut(s) | 327, 793 |
| PdiI | GCCGGC | 2 cut(s) | 294, 376 |
| PdmI | GAANNNNTTC | 2 cut(s) | 869, 1038 |
| PfeI | GAWTC | 8 cut(s) | 199, 306, 339, 619, 914, 1169, 1469, 1577 |
| Ple19I | CGATCG | 1 cut(s) | 217 |
| PleI | GAGTC | 2 cut(s) | 388, 766 |
| PpsI | GAGTC | 2 cut(s) | 388, 766 |
| PpuMI | RGGWCCY | 1 cut(s) | 593 |
| Psp124BI | GAGCTC | 2 cut(s) | 189, 323 |
| Psp5II | RGGWCCY | 1 cut(s) | 593 |
| Psp6I | CCWGG | 1 cut(s) | 546 |
| PspGI | CCWGG | 1 cut(s) | 546 |
| PspN4I | GGNNCC | 3 cut(s) | 594, 734, 1280 |
| PspPI | GGNCC | 4 cut(s) | 593, 1278, 1691, 1796 |
| PspPPI | RGGWCCY | 1 cut(s) | 593 |
| PstI | CTGCAG | 1 cut(s) | 807 |
| PstNI | CAGNNNCTG | 2 cut(s) | 11, 1325 |
| PsuI | RGATCY | 2 cut(s) | 1036, 1657 |
| PvuI | CGATCG | 1 cut(s) | 217 |
| PvuII | CAGCTG | 1 cut(s) | 1322 |
| RsaI | GTAC | 7 cut(s) | 673, 695, 745, 995, 1232, 1627, 1774 |
| RsaNI | GTAC | 7 cut(s) | 672, 694, 744, 994, 1231, 1626, 1773 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1076 |
| SacI | GAGCTC | 2 cut(s) | 189, 323 |
| SalI | GTCGAC | 1 cut(s) | 391 |
| SapI | GCTCTTC | 3 cut(s) | 472, 498, 1434 |
| SaqAI | TTAA | 3 cut(s) | 765, 1202, 1607 |
| Sau3AI | GATC | 8 cut(s) | 214, 499, 679, 1012, 1036, 1510, 1615, 1657 |
| Sau96I | GGNCC | 4 cut(s) | 593, 1278, 1691, 1796 |
| SchI | GAGTC | 2 cut(s) | 388, 767 |
| ScrFI | CCNGG | 3 cut(s) | 278, 548, 1799 |
| SduI | GDGCHC | 7 cut(s) | 189, 273, 323, 714, 818, 1246, 1858 |
| SfaNI | GCATC | 3 cut(s) | 189, 273, 894 |
| SfcI | CTRYAG | 3 cut(s) | 803, 819, 1347 |
| SinI | GGWCC | 3 cut(s) | 593, 1278, 1691 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1076 |
| SmlI | CTYRAG | 1 cut(s) | 587 |
| SmoI | CTYRAG | 1 cut(s) | 587 |
| SphI | GCATGC | 1 cut(s) | 1346 |
| SspMI | CTAG | 3 cut(s) | 599, 1016, 1598 |
| SstI | GAGCTC | 2 cut(s) | 189, 323 |
| StyD4I | CCNGG | 3 cut(s) | 276, 546, 1797 |
| StyI | CCWWGG | 2 cut(s) | 776, 1488 |
| TaaI | ACNGT | 7 cut(s) | 13, 92, 693, 748, 823, 998, 1772 |
| TaqI | TCGA | 7 cut(s) | 155, 183, 267, 362, 392, 1060, 1580 |
| TaqII | GACCGA | 1 cut(s) | 1166 |
| TatI | WGTACW | 3 cut(s) | 693, 993, 1230 |
| TauI | GCSGC | 5 cut(s) | 109, 118, 138, 197, 233 |
| TfiI | GAWTC | 8 cut(s) | 199, 306, 339, 619, 914, 1169, 1469, 1577 |
| Tru1I | TTAA | 3 cut(s) | 765, 1202, 1607 |
| Tru9I | TTAA | 3 cut(s) | 765, 1202, 1607 |
| TscAI | CASTG | 2 cut(s) | 145, 1125 |
| TseFI | GTSAC | 1 cut(s) | 82 |
| TseI | GCWGC | 8 cut(s) | 72, 75, 482, 531, 802, 1210, 1322, 1556 |
| Tsp45I | GTSAC | 1 cut(s) | 82 |
| TspDTI | ATGAA | 9 cut(s) | 173, 878, 1101, 1308, 1322, 1421, 1545, 1553, 1692 |
| TspGWI | ACGGA | 1 cut(s) | 70 |
| TspRI | CASTG | 2 cut(s) | 145, 1125 |
| VneI | GTGCAC | 1 cut(s) | 814 |
| VpaK11BI | GGWCC | 3 cut(s) | 593, 1278, 1691 |
| XapI | RAATTY | 4 cut(s) | 66, 1007, 1026, 1295 |
| XceI | RCATGY | 2 cut(s) | 122, 1346 |
| XmiI | GTMKAC | 2 cut(s) | 392, 1767 |
| XmnI | GAANNNNTTC | 2 cut(s) | 869, 1038 |
| XspI | CTAG | 3 cut(s) | 599, 1016, 1598 |