Rmu_sc0004466.1_g000001

Belongs to the glycosyl hydrolase 31 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004466.1
Physical Location & Seq
Forward (+)
1 .. 15418
15418 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004466.1_g000001.1.cds

Sequence Viewer

Length: 1815 bp
gaacagggtattgggagaggagatcagcctattacctttgcagctaacttagtcagttacagggctggcggcgattggagtacaacctatgctccttccccattctatatgacttcaaagatgaaatctctttaccttgaaggatatgattattgcgtatttgatctaacacaacatgacaaagttcagataaagatacatgggaattcagtagagggacggatattgcatggaaactcaccgactgagctcattgaatgtttcactgaaaccattgggagacctcctaaacttccagactggattatttctggagctgttgttggcatgcagggtggcacaaaatctgtacgtcgtatttggaatgagcttaagagttacaatgctccagtttcagcattctggttgcaggattgggtgggccacagagagacattggttggatcacaactctggtggaattgggaagtagattcaacaaggtatatgggatggcaacaactaattaaagatcttagtgctcagcatattaaagtgatgacatactgcaacccatgtctagctccgtgtcatgaaaagccaaacagaaagagaaacctctttgaggaagcaaagaagttggacatattagtgaaagacaagcaaggagaaccttacatggttccaaatactgcttttgatgtaggaatgttggacttgacacatccagatactggaaattggttcaagcagattcttcaggaaatggttgatgatggagtcagaggatggatggctgattttggtgaaggcctgcctgtggatgccaccctctattcaggcgaagatcctatttcagcccacaacaagtacccagagctatgggcccaaataaatagagagtttgtggaagaatggaaagctaaccgtgtgggaaaggagaaagaagatccacaagaggcgttggtctttttcatgagggctggtttcagagatagccccaaatggggaatgctattttgggaaggagatcagatggtaagttggcagattcatgacggaataaagagtgctgttgttggtctactcagcagtggaatttcagggtatgctttcaatcacagtgatattggagggtactgtgctgtaaatttacctttcatcaagtatcgaagaagtgaagaattgcttttgcgatggatggagctaaatgctttcaccactgttttccggacacatgaaggaaacaaaccatcttgcaacagtcaattctactcaaatgagagaactctagctcattttgcacgatttgctaaagtctatatggcttggaagttctataggatccagcttgtcgaggaagcgactcatagaggcctgcctgtatgccgccacttatttctgcattaccctaatgatgaacatgttcattatttgagttaccagcagttcttgattggtactgagattctggtggtgcctgtcctcgacaaaggtatgaacaatgtgaaggcttattttccaactggtaatgactgttggcaacatgtatggactggaaagcagtttactgaagagggttttgaaaccatagtagaagctcaaattggttaccctgctgtatttgttaagactggttccgttgttggagagacagagagaagtcatcctccaccttgctgtgctccggtgaccagtggccggccgagatctccagcaaccggtgaccggaatccggtaaccgatgaccggaatcctgcgaccggtcacaagaatccaaaatccggctactggactggtgaccggattccggtgtctgattttattgccccctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

604

Amino Acids

68.85

Weight (kDa)

6.15

Isoelectric Point (pI)

45.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1456
AccB7I CCANNNNNTGG 1 cut(s) 713
AccI GTMKAC 1 cut(s) 1063
AccIII TCCGGA 1 cut(s) 1209
AciI CCGC 2 cut(s) 69, 1369
AclWI GGATC 5 cut(s) 451, 821, 923, 1318, 1331
AcoI YGGCCR 2 cut(s) 1678, 1682
AcsI RAATTY 3 cut(s) 205, 1077, 1129
AcuI CTGAAG 2 cut(s) 722, 1572
AfaI GTAC 5 cut(s) 82, 351, 851, 1118, 1441
AflII CTTAAG 1 cut(s) 371
AflIII ACRYGT 2 cut(s) 1402, 1525
AgeI ACCGGT 2 cut(s) 1700, 1742
AgsI TTSAA 7 cut(s) 117, 140, 257, 477, 727, 1096, 1565
AjuI GAANNNNNNNTTGG 5 cut(s) 26, 982, 1014, 1569, 1601
Alw21I GWGCWC 3 cut(s) 252, 523, 1666
Alw26I GTCTC 3 cut(s) 274, 425, 1625
AlwI GGATC 5 cut(s) 451, 821, 923, 1318, 1331
AlwNI CAGNNNCTG 1 cut(s) 713
Aor13HI TCCGGA 1 cut(s) 1209
AoxI GGCC 6 cut(s) 421, 790, 864, 1354, 1678, 1682
ApaI GGGCCC 1 cut(s) 868
ApeKI GCWGC 1 cut(s) 41
ApoI RAATTY 3 cut(s) 205, 1077, 1129
AsiGI ACCGGT 2 cut(s) 1700, 1742
Asp700I GAANNNNTTC 1 cut(s) 1404
AspS9I GGNCC 3 cut(s) 421, 864, 865
AsuHPI GGTGA 6 cut(s) 231, 797, 1189, 1681, 1715, 1790
BaeGI GKGCMC 1 cut(s) 868
BamHI GGATCC 1 cut(s) 1323
BanI GGYRCC 1 cut(s) 1456
BanII GRGCYC 2 cut(s) 252, 868
Bbv12I GWGCWC 3 cut(s) 252, 523, 1666
BbvI GCAGC 1 cut(s) 53
BccI CCATC 8 cut(s) 486, 749, 762, 766, 1009, 1170, 1174, 1240
BcoDI GTCTC 3 cut(s) 274, 425, 1625
BfaI CTAG 2 cut(s) 560, 1271
BfmI CTRYAG 1 cut(s) 1318
BfrI CTTAAG 1 cut(s) 371
BglII AGATCT 2 cut(s) 511, 1688
BisI GCNGC 3 cut(s) 42, 70, 1369
BlpI GCTNAGC 1 cut(s) 522
BlsI GCNGC 3 cut(s) 43, 71, 1370
BmgT120I GGNCC 3 cut(s) 421, 864, 865
BmiI GGNNCC 5 cut(s) 663, 866, 1325, 1458, 1618
BmsI GCATC 1 cut(s) 793
BpmI CTGGAG 3 cut(s) 333, 372, 1677
Bpu1102I GCTNAGC 1 cut(s) 522
BsaI GGTCTC 1 cut(s) 274
BsaWI WCCGGW 9 cut(s) 1209, 1666, 1700, 1707, 1714, 1728, 1742, 1782, 1789
BsaXI ACNNNNNCTCC 4 cut(s) 76, 106, 306, 336
Bse118I RCCGGY 3 cut(s) 1680, 1700, 1742
Bse1I ACTGG 9 cut(s) 305, 389, 718, 1510, 1540, 1618, 1674, 1775, 1780
BseAI TCCGGA 1 cut(s) 1209
BseGI GGATG 7 cut(s) 497, 703, 773, 777, 808, 1185, 1645
BseMII CTCAG 4 cut(s) 237, 536, 1081, 1434
BseNI ACTGG 9 cut(s) 305, 389, 718, 1510, 1540, 1618, 1674, 1775, 1780
BseRI GAGGAG 1 cut(s) 33
BseSI GKGCMC 1 cut(s) 868
BseX3I CGGCCG 1 cut(s) 1682
BseXI GCAGC 1 cut(s) 53
Bsh1285I CGRYCG 2 cut(s) 1685, 1743
BshFI GGCC 6 cut(s) 423, 792, 866, 1356, 1680, 1684
BshNI GGYRCC 1 cut(s) 1456
BshTI ACCGGT 2 cut(s) 1700, 1742
BsiEI CGRYCG 2 cut(s) 1685, 1743
BsiHKAI GWGCWC 3 cut(s) 252, 523, 1666
BslFI GGGAC 1 cut(s) 231
BsmAI GTCTC 3 cut(s) 274, 425, 1625
BsmFI GGGAC 1 cut(s) 231
BsmI GAATGC 2 cut(s) 398, 996
BsnI GGCC 6 cut(s) 423, 792, 866, 1356, 1680, 1684
Bso31I GGTCTC 1 cut(s) 274
Bsp120I GGGCCC 1 cut(s) 864
Bsp1286I GDGCHC 4 cut(s) 252, 523, 868, 1666
Bsp13I TCCGGA 1 cut(s) 1209
Bsp143I GATC 9 cut(s) 22, 163, 443, 511, 826, 928, 1009, 1323, 1688
Bsp1720I GCTNAGC 1 cut(s) 522
BspACI CCGC 2 cut(s) 69, 1369
BspANI GGCC 6 cut(s) 423, 792, 866, 1356, 1680, 1684
BspCNI CTCAG 4 cut(s) 238, 535, 1080, 1435
BspEI TCCGGA 1 cut(s) 1209
BspHI TCATGA 3 cut(s) 571, 954, 1033
BspLI GGNNCC 5 cut(s) 663, 866, 1325, 1458, 1618
BspPI GGATC 5 cut(s) 451, 821, 923, 1318, 1331
BspT107I GGYRCC 1 cut(s) 1456
BspTI CTTAAG 1 cut(s) 371
BspTNI GGTCTC 1 cut(s) 274
BsrFI RCCGGY 3 cut(s) 1680, 1700, 1742
BsrI ACTGG 9 cut(s) 305, 389, 718, 1510, 1540, 1618, 1674, 1775, 1780
BssAI RCCGGY 3 cut(s) 1680, 1700, 1742
BssMI GATC 9 cut(s) 22, 163, 443, 511, 826, 928, 1009, 1323, 1688
Bst4CI ACNGT 6 cut(s) 908, 1103, 1121, 1204, 1244, 1517
Bst6I CTCTTC 1 cut(s) 1548
BstAFI CTTAAG 1 cut(s) 371
BstAPI GCANNNNNTGC 1 cut(s) 1289
BstC8I GCNNGC 5 cut(s) 67, 329, 794, 1358, 1682
BstDEI CTNAG 6 cut(s) 49, 246, 515, 522, 1067, 1443
BstEII GGTNACC 5 cut(s) 1589, 1669, 1703, 1717, 1778
BstENI CCTNNNNNAGG 1 cut(s) 602
BstF5I GGATG 7 cut(s) 497, 703, 773, 777, 808, 1185, 1645
BstKTI GATC 9 cut(s) 25, 166, 446, 514, 829, 931, 1012, 1326, 1691
BstMAI GTCTC 3 cut(s) 274, 425, 1625
BstMBI GATC 9 cut(s) 22, 163, 443, 511, 826, 928, 1009, 1323, 1688
BstMCI CGRYCG 2 cut(s) 1685, 1743
BstMWI GCNNNNNNNGC 2 cut(s) 1280, 1289
BstNSI RCATGY 3 cut(s) 331, 1406, 1529
BstPI GGTNACC 5 cut(s) 1589, 1669, 1703, 1717, 1778
BstSFI CTRYAG 1 cut(s) 1318
BstSLI GKGCMC 1 cut(s) 868
BstV1I GCAGC 1 cut(s) 53
BstX2I RGATCY 5 cut(s) 511, 826, 928, 1323, 1688
BstXI CCANNNNNNTGG 1 cut(s) 861
BstYI RGATCY 5 cut(s) 511, 826, 928, 1323, 1688
BstZI CGGCCG 1 cut(s) 1682
BsuRI GGCC 6 cut(s) 423, 792, 866, 1356, 1680, 1684
BtgZI GCGATG 1 cut(s) 1189
BtsCI GGATG 7 cut(s) 497, 703, 773, 777, 808, 1185, 1645
BtsI GCAGTG 1 cut(s) 1078
BtsIMutI CAGTG 5 cut(s) 264, 1078, 1108, 1200, 1681
Cac8I GCNNGC 5 cut(s) 67, 329, 794, 1358, 1682
CaiI CAGNNNCTG 1 cut(s) 713
CciI TCATGA 3 cut(s) 571, 954, 1033
Cfr10I RCCGGY 3 cut(s) 1680, 1700, 1742
Cfr13I GGNCC 3 cut(s) 421, 864, 865
Csp6I GTAC 5 cut(s) 81, 350, 850, 1117, 1440
CspAI ACCGGT 2 cut(s) 1700, 1742
CspCI CAANNNNNGTGG 2 cut(s) 437, 472
CviQI GTAC 5 cut(s) 81, 350, 850, 1117, 1440
DdeI CTNAG 6 cut(s) 49, 246, 515, 522, 1067, 1443
DpnI GATC 9 cut(s) 24, 165, 445, 513, 828, 930, 1011, 1325, 1690
DpnII GATC 9 cut(s) 22, 163, 443, 511, 826, 928, 1009, 1323, 1688
EaeI YGGCCR 2 cut(s) 1678, 1682
EagI CGGCCG 1 cut(s) 1682
Eam1104I CTCTTC 1 cut(s) 1548
EarI CTCTTC 1 cut(s) 1548
Ecl136II GAGCTC 1 cut(s) 250
EclXI CGGCCG 1 cut(s) 1682
Eco147I AGGCCT 2 cut(s) 792, 1356
Eco24I GRGCYC 2 cut(s) 252, 868
Eco31I GGTCTC 1 cut(s) 274
Eco52I CGGCCG 1 cut(s) 1682
Eco53kI GAGCTC 1 cut(s) 250
Eco57I CTGAAG 2 cut(s) 722, 1572
Eco91I GGTNACC 5 cut(s) 1589, 1669, 1703, 1717, 1778
EcoICRI GAGCTC 1 cut(s) 250
EcoNI CCTNNNNNAGG 1 cut(s) 602
EcoO65I GGTNACC 5 cut(s) 1589, 1669, 1703, 1717, 1778
EcoRI GAATTC 1 cut(s) 205
EcoT38I GRGCYC 2 cut(s) 252, 868
FalI AAGNNNNNCTT 2 cut(s) 1152, 1184
FaqI GGGAC 1 cut(s) 231
FblI GTMKAC 1 cut(s) 1063
Fnu4HI GCNGC 3 cut(s) 42, 70, 1369
FokI GGATG 7 cut(s) 504, 690, 780, 784, 815, 1192, 1632
FriOI GRGCYC 2 cut(s) 252, 868
FseI GGCCGGCC 1 cut(s) 1684
Fsp4HI GCNGC 3 cut(s) 42, 70, 1369
FspBI CTAG 2 cut(s) 560, 1271
GluI GCNGC 3 cut(s) 42, 70, 1369
GsuI CTGGAG 3 cut(s) 333, 372, 1677
HaeIII GGCC 6 cut(s) 423, 792, 866, 1356, 1680, 1684
HphI GGTGA 6 cut(s) 231, 797, 1189, 1681, 1715, 1790
Hpy166II GTNNAC 2 cut(s) 1064, 1548
Hpy188I TCNGA 5 cut(s) 189, 764, 971, 1014, 1798
Hpy188III TCNNGA 9 cut(s) 296, 312, 572, 707, 740, 955, 1034, 1210, 1432
Hpy8I GTNNAC 2 cut(s) 1064, 1548
Hpy99I CGWCG 1 cut(s) 357
HpyAV CCTTC 6 cut(s) 105, 134, 782, 998, 1214, 1483
HpyCH4III ACNGT 6 cut(s) 908, 1103, 1121, 1204, 1244, 1517
HpyCH4IV ACGT 1 cut(s) 352
HpyCH4V TGCA 8 cut(s) 41, 229, 331, 409, 549, 1239, 1283, 1384
HpyF10VI GCNNNNNNNGC 2 cut(s) 1280, 1289
HpyF3I CTNAG 6 cut(s) 49, 246, 515, 522, 1067, 1443
HpySE526I ACGT 1 cut(s) 352
Kpn2I TCCGGA 1 cut(s) 1209
KroI GCCGGC 1 cut(s) 1680
KroNI GCCGGC 1 cut(s) 1682
Kzo9I GATC 9 cut(s) 22, 163, 443, 511, 826, 928, 1009, 1323, 1688
LmnI GCTCC 6 cut(s) 97, 314, 391, 568, 1183, 1669
Lsp1109I GCAGC 1 cut(s) 53
LweI GCATC 1 cut(s) 793
MaeI CTAG 2 cut(s) 560, 1271
MaeII ACGT 1 cut(s) 352
MaeIII GTNAC 9 cut(s) 56, 377, 1418, 1589, 1669, 1703, 1717, 1745, 1778
MalI GATC 9 cut(s) 24, 165, 445, 513, 828, 930, 1011, 1325, 1690
MboI GATC 9 cut(s) 22, 163, 443, 511, 826, 928, 1009, 1323, 1688
MboII GAAGA 7 cut(s) 728, 836, 902, 938, 1164, 1172, 1565
MflI RGATCY 5 cut(s) 511, 826, 928, 1323, 1688
MhlI GDGCHC 4 cut(s) 252, 523, 868, 1666
MluCI AATT 9 cut(s) 205, 460, 504, 718, 1077, 1129, 1163, 1247, 1584
MlyI GAGTC 2 cut(s) 768, 1339
MmeI TCCRAC 5 cut(s) 421, 600, 672, 1526, 1606
MroI TCCGGA 1 cut(s) 1209
MroNI GCCGGC 1 cut(s) 1680
MroXI GAANNNNTTC 1 cut(s) 1404
MseI TTAA 4 cut(s) 372, 507, 531, 1608
MslI CAYNNNNRTG 1 cut(s) 629
MspCI CTTAAG 1 cut(s) 371
Mva1269I GAATGC 2 cut(s) 398, 996
MwoI GCNNNNNNNGC 2 cut(s) 1280, 1289
NaeI GCCGGC 1 cut(s) 1682
NdeII GATC 9 cut(s) 22, 163, 443, 511, 826, 928, 1009, 1323, 1688
NgoMIV GCCGGC 1 cut(s) 1680
NlaIV GGNNCC 5 cut(s) 663, 866, 1325, 1458, 1618
NmeAIII GCCGAG 1 cut(s) 1710
NmuCI GTSAC 4 cut(s) 1669, 1703, 1745, 1778
NspI RCATGY 3 cut(s) 331, 1406, 1529
PaeI GCATGC 1 cut(s) 331
PagI TCATGA 3 cut(s) 571, 954, 1033
PceI AGGCCT 2 cut(s) 792, 1356
PciI ACATGT 2 cut(s) 1402, 1525
PctI GAATGC 2 cut(s) 398, 996
PdiI GCCGGC 1 cut(s) 1682
PdmI GAANNNNTTC 1 cut(s) 1404
PfeI GAWTC 8 cut(s) 473, 733, 1030, 1447, 1711, 1732, 1753, 1786
PflMI CCANNNNNTGG 1 cut(s) 713
PinAI ACCGGT 2 cut(s) 1700, 1742
PkrI GCNGC 3 cut(s) 43, 71, 1370
PleI GAGTC 2 cut(s) 767, 1339
PpsI GAGTC 2 cut(s) 767, 1339
PscI ACATGT 2 cut(s) 1402, 1525
Psp124BI GAGCTC 1 cut(s) 252
PspEI GGTNACC 5 cut(s) 1589, 1669, 1703, 1717, 1778
PspN4I GGNNCC 5 cut(s) 663, 866, 1325, 1458, 1618
PspOMI GGGCCC 1 cut(s) 864
PspPI GGNCC 3 cut(s) 421, 864, 865
PstNI CAGNNNCTG 1 cut(s) 713
PsuI RGATCY 5 cut(s) 511, 826, 928, 1323, 1688
RigI GGCCGGCC 1 cut(s) 1684
RsaI GTAC 5 cut(s) 82, 351, 851, 1118, 1441
RsaNI GTAC 5 cut(s) 81, 350, 850, 1117, 1440
RseI CAYNNNNRTG 1 cut(s) 629
SacI GAGCTC 1 cut(s) 252
SaqAI TTAA 4 cut(s) 372, 507, 531, 1608
SatI GCNGC 3 cut(s) 42, 70, 1369
Sau3AI GATC 9 cut(s) 22, 163, 443, 511, 826, 928, 1009, 1323, 1688
Sau96I GGNCC 3 cut(s) 421, 864, 865
SchI GAGTC 2 cut(s) 768, 1339
SduI GDGCHC 4 cut(s) 252, 523, 868, 1666
SfaNI GCATC 1 cut(s) 793
SfcI CTRYAG 1 cut(s) 1318
SmiMI CAYNNNNRTG 1 cut(s) 629
SmlI CTYRAG 1 cut(s) 371
SmoI CTYRAG 1 cut(s) 371
SphI GCATGC 1 cut(s) 331
Sse9I AATT 9 cut(s) 205, 460, 504, 718, 1077, 1129, 1163, 1247, 1584
SseBI AGGCCT 2 cut(s) 792, 1356
SsiI CCGC 2 cut(s) 69, 1369
SspMI CTAG 2 cut(s) 560, 1271
SstI GAGCTC 1 cut(s) 252
StuI AGGCCT 2 cut(s) 792, 1356
TaaI ACNGT 6 cut(s) 908, 1103, 1121, 1204, 1244, 1517
TaiI ACGT 1 cut(s) 355
TaqI TCGA 3 cut(s) 1150, 1335, 1467
TasI AATT 9 cut(s) 205, 460, 504, 718, 1077, 1129, 1163, 1247, 1584
TatI WGTACW 1 cut(s) 80
TauI GCSGC 2 cut(s) 72, 1371
TfiI GAWTC 8 cut(s) 473, 733, 1030, 1447, 1711, 1732, 1753, 1786
Tru1I TTAA 4 cut(s) 372, 507, 531, 1608
Tru9I TTAA 4 cut(s) 372, 507, 531, 1608
TscAI CASTG 5 cut(s) 271, 1078, 1108, 1207, 1681
TseFI GTSAC 4 cut(s) 1669, 1703, 1745, 1778
TseI GCWGC 1 cut(s) 41
Tsp45I GTSAC 4 cut(s) 1669, 1703, 1745, 1778
TspDTI ATGAA 9 cut(s) 137, 588, 943, 1022, 1129, 1233, 1397, 1413, 1493
TspGWI ACGGA 4 cut(s) 235, 555, 1053, 1609
TspRI CASTG 5 cut(s) 271, 1078, 1108, 1207, 1681
Van91I CCANNNNNTGG 1 cut(s) 713
Vha464I CTTAAG 1 cut(s) 371
XagI CCTNNNNNAGG 1 cut(s) 602
XapI RAATTY 3 cut(s) 205, 1077, 1129
XceI RCATGY 3 cut(s) 331, 1406, 1529
XmiI GTMKAC 1 cut(s) 1063
XmnI GAANNNNTTC 1 cut(s) 1404
XspI CTAG 2 cut(s) 560, 1271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.