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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g10341 |
| rosa_laevigata | RLG00000034518 |
| rosa_multiflora | Rmu_sc0004955.1_g000005 |
| rosa_samantha | Rh5BG315600 Rh5BG328400 Rh5CG341900 Rh5DG325600 Rh5DG339500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 286 |
| AcsI | RAATTY | 1 cut(s) | 229 |
| AfaI | GTAC | 1 cut(s) | 300 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 15, 16 |
| AflIII | ACRYGT | 1 cut(s) | 204 |
| AgsI | TTSAA | 2 cut(s) | 160, 175 |
| AjiI | CACGTC | 2 cut(s) | 142, 205 |
| AluBI | AGCT | 1 cut(s) | 127 |
| AluI | AGCT | 1 cut(s) | 127 |
| Alw21I | GWGCWC | 1 cut(s) | 29 |
| Alw26I | GTCTC | 2 cut(s) | 94, 174 |
| AoxI | GGCC | 1 cut(s) | 106 |
| ApeKI | GCWGC | 1 cut(s) | 145 |
| ApoI | RAATTY | 1 cut(s) | 229 |
| AspS9I | GGNCC | 1 cut(s) | 107 |
| AsuHPI | GGTGA | 2 cut(s) | 254, 266 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 282 |
| Bbv12I | GWGCWC | 1 cut(s) | 29 |
| BbvI | GCAGC | 1 cut(s) | 132 |
| BccI | CCATC | 4 cut(s) | 91, 118, 233, 239 |
| BcoDI | GTCTC | 2 cut(s) | 94, 174 |
| BfaI | CTAG | 1 cut(s) | 75 |
| BfmI | CTRYAG | 1 cut(s) | 146 |
| BfuAI | ACCTGC | 1 cut(s) | 286 |
| BisI | GCNGC | 1 cut(s) | 146 |
| BlsI | GCNGC | 1 cut(s) | 147 |
| BmgBI | CACGTC | 2 cut(s) | 142, 205 |
| BmgT120I | GGNCC | 1 cut(s) | 107 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 15, 16 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 15, 16 |
| BseMII | CTCAG | 1 cut(s) | 105 |
| BseRI | GAGGAG | 1 cut(s) | 19 |
| BseXI | GCAGC | 1 cut(s) | 132 |
| BshFI | GGCC | 1 cut(s) | 108 |
| BsiHKAI | GWGCWC | 1 cut(s) | 29 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 15, 16 |
| BsmAI | GTCTC | 2 cut(s) | 94, 174 |
| BsnI | GGCC | 1 cut(s) | 108 |
| Bsp1286I | GDGCHC | 1 cut(s) | 29 |
| BspANI | GGCC | 1 cut(s) | 108 |
| BspCNI | CTCAG | 1 cut(s) | 104 |
| BspMAI | CTGCAG | 1 cut(s) | 150 |
| BspMI | ACCTGC | 1 cut(s) | 286 |
| BspQI | GCTCTTC | 1 cut(s) | 285 |
| Bst4CI | ACNGT | 1 cut(s) | 171 |
| Bst6I | CTCTTC | 1 cut(s) | 285 |
| BstC8I | GCNNGC | 1 cut(s) | 129 |
| BstDEI | CTNAG | 1 cut(s) | 91 |
| BstMAI | GTCTC | 2 cut(s) | 94, 174 |
| BstSFI | CTRYAG | 1 cut(s) | 146 |
| BstV1I | GCAGC | 1 cut(s) | 132 |
| BsuRI | GGCC | 1 cut(s) | 108 |
| BtgZI | GCGATG | 1 cut(s) | 44 |
| BtrI | CACGTC | 2 cut(s) | 142, 205 |
| BveI | ACCTGC | 1 cut(s) | 286 |
| Cac8I | GCNNGC | 1 cut(s) | 129 |
| Cfr13I | GGNCC | 1 cut(s) | 107 |
| Csp6I | GTAC | 1 cut(s) | 299 |
| CviAII | CATG | 1 cut(s) | 302 |
| CviJI | RGCY | 2 cut(s) | 108, 127 |
| CviKI_1 | RGCY | 2 cut(s) | 108, 127 |
| CviQI | GTAC | 1 cut(s) | 299 |
| DdeI | CTNAG | 1 cut(s) | 91 |
| Eam1104I | CTCTTC | 1 cut(s) | 285 |
| EarI | CTCTTC | 1 cut(s) | 285 |
| FaeI | CATG | 1 cut(s) | 305 |
| FaiI | YATR | 2 cut(s) | 188, 303 |
| FatI | CATG | 1 cut(s) | 301 |
| Fnu4HI | GCNGC | 1 cut(s) | 146 |
| Fsp4HI | GCNGC | 1 cut(s) | 146 |
| FspBI | CTAG | 1 cut(s) | 75 |
| GluI | GCNGC | 1 cut(s) | 146 |
| HaeIII | GGCC | 1 cut(s) | 108 |
| Hin1II | CATG | 1 cut(s) | 305 |
| HphI | GGTGA | 2 cut(s) | 254, 266 |
| Hpy166II | GTNNAC | 1 cut(s) | 225 |
| Hpy188I | TCNGA | 1 cut(s) | 202 |
| Hpy188III | TCNNGA | 1 cut(s) | 192 |
| Hpy8I | GTNNAC | 1 cut(s) | 225 |
| HpyCH4III | ACNGT | 1 cut(s) | 171 |
| HpyCH4IV | ACGT | 3 cut(s) | 141, 152, 204 |
| HpyCH4V | TGCA | 3 cut(s) | 41, 131, 148 |
| HpyF3I | CTNAG | 1 cut(s) | 91 |
| HpySE526I | ACGT | 3 cut(s) | 141, 152, 204 |
| Hsp92II | CATG | 1 cut(s) | 305 |
| LguI | GCTCTTC | 1 cut(s) | 285 |
| LmnI | GCTCC | 1 cut(s) | 32 |
| LpnPI | CCDG | 4 cut(s) | 51, 90, 129, 281 |
| Lsp1109I | GCAGC | 1 cut(s) | 132 |
| MaeI | CTAG | 1 cut(s) | 75 |
| MaeII | ACGT | 3 cut(s) | 141, 152, 204 |
| MaeIII | GTNAC | 1 cut(s) | 254 |
| MboII | GAAGA | 2 cut(s) | 148, 302 |
| MhlI | GDGCHC | 1 cut(s) | 29 |
| MluCI | AATT | 2 cut(s) | 229, 270 |
| MnlI | CCTC | 6 cut(s) | 40, 57, 66, 107, 130, 210 |
| NlaIII | CATG | 1 cut(s) | 305 |
| NmuCI | GTSAC | 1 cut(s) | 254 |
| PciSI | GCTCTTC | 1 cut(s) | 285 |
| PkrI | GCNGC | 1 cut(s) | 147 |
| PspPI | GGNCC | 1 cut(s) | 107 |
| PstI | CTGCAG | 1 cut(s) | 150 |
| RsaI | GTAC | 1 cut(s) | 300 |
| RsaNI | GTAC | 1 cut(s) | 299 |
| SapI | GCTCTTC | 1 cut(s) | 285 |
| SatI | GCNGC | 1 cut(s) | 146 |
| Sau96I | GGNCC | 1 cut(s) | 107 |
| SduI | GDGCHC | 1 cut(s) | 29 |
| SetI | ASST | 6 cut(s) | 129, 144, 155, 207, 300, 309 |
| SfcI | CTRYAG | 1 cut(s) | 146 |
| Sse9I | AATT | 2 cut(s) | 229, 270 |
| SspMI | CTAG | 1 cut(s) | 75 |
| TaaI | ACNGT | 1 cut(s) | 171 |
| TaiI | ACGT | 3 cut(s) | 144, 155, 207 |
| TasI | AATT | 2 cut(s) | 229, 270 |
| TseFI | GTSAC | 1 cut(s) | 254 |
| TseI | GCWGC | 1 cut(s) | 145 |
| Tsp45I | GTSAC | 1 cut(s) | 254 |
| TspDTI | ATGAA | 1 cut(s) | 175 |
| XapI | RAATTY | 1 cut(s) | 229 |
| XspI | CTAG | 1 cut(s) | 75 |