Rmu_sc0005789.1_g000011

U-box domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005789.1
OG0015666
Physical Location & Seq
Forward (+)
63680 .. 69417
5738 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005789.1_g000011.1.cds

Sequence Viewer

Length: 2367 bp
atgcctccatcctttctatcatgtcgcaagctaaaagtagcctcgagagaggatgctgctgcaatccccaaagaaggtcgccctccaactgaagccgagttgcaacagttctttcttccctatcgaggattctgtgcacgaaaagggattatagccatggaagtggtcctccatgacattgatgttccaagcgcacttgttcattatattattcacaacgccatctccaatattgtcgttggtgcttcccatcgcaatgctcttacgagaaaatttaaagactttgatgtgccaagtagcctactcaaatatgtaccagatacctgtgcagtatatgttatatcatcaaaaggaagacttcaggctaaacgggcagcaagtcaacctcaaacaccgaaatgtgatgcagagcctctccgggatacttctcaagaaaaccatcttccttcccatcctcatgatggttcagactctgaagacatccctagatcacaatttagtcatgggagctcaagttcaaaaagtgcctcctcagacagaatatcttttgatagactctctgactttaaaccgataactccccataaaatgaaaaggtcaacaaattcaccaacattgtcagttgacagttcggcatcagaaacttcatcccatcgatattcactctcaggcagcgattcctcggggccacttagcttccaatcaaatggctcagataatgagggtaacaagaactctctatcctcacaaactcaatctggcttggatggtgagatgatgagattaaggcaggaattgaagcaaacaatggacatgtacacttcagcttgcaaagaagctttagcatctaagcagaaggcatgggagctccaaaaatggaaaacagcgaaagagcgcaagttagaggaagccaagcttgctgaagaggctgctgtggccttagcagagaaggagaagcagaaaagcaaggctgcaatagatgcagcgcggatggcacataggctagcagagatagagacccagaagaggaaaattgcagaaatgagagccaaggaggaggctaaagagagaaggaaagcaatggaggctctggcacagaacaaagctaagtataggagatactccattgaagagattgaagttgccacagattactttaacatttcaaacaaggttggggaaggtggatatggacctgtttataaaggcctgcttaaccacaccccggttgccatcaaggtcttgaggccagacatttcacaggggaagaggcaattccaacaagaggttgaggttctaagctgcattagacatccacacatggttctcttagtaggtacctgccctgagtatggatgccttgtatatgagtacatggaaaacggaagcttagaagaccggctcttccagaaggacaacacgcctccaatcccatggactgtccgtttcaaaatagctgcagaaattgccactggccttctttttcttcaccagacaaaaccagaacccatcgtgcaccgtgatctcaagccggcaaacattctcctagaccggaactgtgtgagcaagattgctgatgtaggcttatccaggctagtcccggcatctgtggctgatagtgtcactcaataccgcctgacagcagcagccggtacattttgctacattgacccggagtatcagaaaacaggaatgttgggtgtgaaatcagacatatattccttgggaattatgctgttacagattcttacatcaaagcctgcaatggcattgtcccaccaggttgaggagtccattgagaaaggtacattggcggagttgcttgatcctgcagtgccagactggcctgttgaagaggctttgtcattagcaaaactggctttgaagtgctgtgagctcaggaggcgagatagaccggatcttggttcagtcatcttgcctgagctggaccggctaagagagtttgggaatcagaaggaagccaataactatgccatcgttccctatcgagggcattcacacgcatcacttccaccagtaccagtagggagatcaaccacaaatgccagtcagcatttccaaaagttggagtgcaaaggccggcgccgccatcaatctgagtttggccgttttgatccgggtccagaggtcgcacgtccgccacacaggacctctcatcgcttggcttccagactatatgcgttggtcgttcccgacgttgaaccacctagacttgagccgttctcgcctcggcctgatccgacacggccattcttccacccaatcaccattaagtctgattggaccggagcaccgatccataagcctcacatcacctatttccttccggcaagagatgatgagtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0009507 GO:0009536 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr Usp

Protein Analysis

788

Amino Acids

88.02

Weight (kDa)

8.88

Isoelectric Point (pI)

50.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015666)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g34160 FvH4_6g34160
malus_domestica MD09G1188100.v1.1
prunus_persica Prupe.3G045000_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0144481
rosa_laevigata RLG00000020084
rosa_multiflora Rmu_sc0005789.1_g000009 Rmu_sc0005789.1_g000011 Rmu_sc0007240.1_g000006
rosa_roxburghii Rroxscaffold_2G00101260
rosa_rugosa Rorug02G0386900
rosa_samantha Rh2AG439300 Rh2BG449500 Rh2CG426300 Rh2DG459300
rosa_wichuraiana Rw2G035940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1203
Acc36I ACCTGC 1 cut(s) 1349
Acc65I GGTACC 1 cut(s) 1337
AccB1I GGYRCC 2 cut(s) 1337, 2103
AccB7I CCANNNNNTGG 1 cut(s) 2086
AccII CGCG 1 cut(s) 988
AciI CCGC 5 cut(s) 988, 1633, 1814, 2107, 2159
AclWI GGATC 5 cut(s) 1820, 1926, 2129, 2252, 2311
AcoI YGGCCR 2 cut(s) 2125, 2267
AcsI RAATTY 2 cut(s) 272, 604
AcuI CTGAAG 5 cut(s) 111, 344, 495, 807, 942
AcyI GRCGYC 1 cut(s) 2104
AfaI GTAC 7 cut(s) 315, 818, 1339, 1373, 1654, 1807, 2040
AflIII ACRYGT 1 cut(s) 813
AgsI TTSAA 9 cut(s) 519, 799, 1130, 1139, 1167, 1450, 1853, 1885, 2222
AjiI CACGTC 1 cut(s) 2156
AjnI CCWGG 2 cut(s) 1589, 1779
AjuI GAANNNNNNNTTGG 2 cut(s) 1793, 1825
AloI GAACNNNNNNTCC 4 cut(s) 499, 531, 725, 757
Alw21I GWGCWC 6 cut(s) 139, 512, 870, 1518, 1899, 2314
Alw26I GTCTC 1 cut(s) 1010
Alw44I GTGCAC 2 cut(s) 135, 1514
AlwI GGATC 5 cut(s) 1820, 1926, 2129, 2252, 2311
AlwNI CAGNNNCTG 1 cut(s) 473
Ama87I CYCGRG 2 cut(s) 43, 682
ApaLI GTGCAC 2 cut(s) 135, 1514
ApoI RAATTY 2 cut(s) 272, 604
Asp718I GGTACC 1 cut(s) 1337
AspLEI GCGC 4 cut(s) 194, 897, 988, 2106
AspS9I GGNCC 7 cut(s) 166, 686, 1193, 1948, 2141, 2169, 2304
AsuC2I CCSGG 5 cut(s) 419, 1226, 1601, 1673, 2139
AsuHPI GGTGA 5 cut(s) 600, 782, 1481, 2278, 2326
AsuNHI GCTAGC 1 cut(s) 1003
AvaI CYCGRG 2 cut(s) 43, 682
AvaII GGWCC 6 cut(s) 166, 1193, 1948, 2141, 2169, 2304
BaeGI GKGCMC 2 cut(s) 139, 1518
BanI GGYRCC 2 cut(s) 1337, 2103
BanII GRGCYC 3 cut(s) 512, 870, 1899
BbsI GAAGAC 3 cut(s) 361, 483, 1401
Bbv12I GWGCWC 6 cut(s) 139, 512, 870, 1518, 1899, 2314
BceAI ACGGC 3 cut(s) 2112, 2224, 2282
BciT130I CCWGG 2 cut(s) 1591, 1781
BciVI GTATCC 1 cut(s) 415
BcnI CCSGG 5 cut(s) 419, 1226, 1601, 1673, 2139
BcoDI GTCTC 1 cut(s) 1010
BfaI CTAG 5 cut(s) 486, 1004, 1547, 1595, 2229
BfmI CTRYAG 2 cut(s) 1458, 1830
BfoI RGCGCY 1 cut(s) 2107
BfuAI ACCTGC 1 cut(s) 1349
BfuI GTATCC 1 cut(s) 415
BglI GCCNNNNNGGC 1 cut(s) 1843
Bme1390I CCNGG 7 cut(s) 419, 1226, 1591, 1601, 1673, 1781, 2139
Bme18I GGWCC 6 cut(s) 166, 1193, 1948, 2141, 2169, 2304
BmeT110I CYCGRG 2 cut(s) 43, 682
BmgBI CACGTC 1 cut(s) 2156
BmgT120I GGNCC 7 cut(s) 166, 686, 1193, 1948, 2141, 2169, 2304
BmiI GGNNCC 4 cut(s) 687, 1339, 2105, 2142
BmrFI CCNGG 7 cut(s) 419, 1226, 1591, 1601, 1673, 1781, 2139
BmsI GCATC 8 cut(s) 43, 394, 644, 854, 970, 1346, 1613, 2033
BmtI GCTAGC 1 cut(s) 1007
BpiI GAAGAC 3 cut(s) 361, 483, 1401
BplI GAGNNNNNCTC 2 cut(s) 2228, 2260
Bpu10I CCTNAGC 3 cut(s) 940, 1898, 1941
BpuEI CTTGAG 5 cut(s) 414, 496, 1264, 1511, 2255
BpuMI CCSGG 5 cut(s) 419, 1226, 1601, 1673, 2139
Bsa29I ATCGAT 1 cut(s) 655
BsaHI GRCGYC 1 cut(s) 2104
BsaI GGTCTC 1 cut(s) 1010
BsaJI CCNNGG 7 cut(s) 156, 681, 1050, 1224, 1433, 1722, 2249
BsaWI WCCGGW 3 cut(s) 1551, 1915, 2306
BsaXI ACNNNNNCTCC 4 cut(s) 209, 239, 499, 529
Bse118I RCCGGY 5 cut(s) 1398, 1531, 1649, 1950, 2100
Bse1I ACTGG 6 cut(s) 1477, 1847, 1881, 2036, 2042, 2067
Bse3DI GCAATG 3 cut(s) 262, 1086, 1770
BseBI CCWGG 2 cut(s) 1591, 1781
BseCI ATCGAT 1 cut(s) 655
BseDI CCNNGG 7 cut(s) 156, 681, 1050, 1224, 1433, 1722, 2249
BseGI GGATG 9 cut(s) 8, 58, 451, 480, 647, 772, 996, 1312, 1361
BseMI GCAATG 3 cut(s) 262, 1086, 1770
BseMII CTCAG 7 cut(s) 546, 681, 726, 1338, 1912, 1932, 2109
BseNI ACTGG 6 cut(s) 1477, 1847, 1881, 2036, 2042, 2067
BseRI GAGGAG 3 cut(s) 520, 1070, 1802
BseSI GKGCMC 2 cut(s) 139, 1518
BsgI GTGCAG 1 cut(s) 348
Bsh1236I CGCG 1 cut(s) 988
BshNI GGYRCC 2 cut(s) 1337, 2103
BshVI ATCGAT 1 cut(s) 655
BsiHKAI GWGCWC 6 cut(s) 139, 512, 870, 1518, 1899, 2314
BsiHKCI CYCGRG 2 cut(s) 43, 682
BslFI GGGAC 2 cut(s) 1583, 1759
BsmAI GTCTC 1 cut(s) 1010
BsmFI GGGAC 2 cut(s) 1583, 1759
BsmI GAATGC 1 cut(s) 2014
Bso31I GGTCTC 1 cut(s) 1010
BsoBI CYCGRG 2 cut(s) 43, 682
Bsp1286I GDGCHC 6 cut(s) 139, 512, 870, 1518, 1899, 2314
Bsp1407I TGTACA 1 cut(s) 816
Bsp143I GATC 8 cut(s) 488, 1522, 1825, 1918, 2051, 2134, 2257, 2316
Bsp19I CCATGG 2 cut(s) 156, 1433
BspACI CCGC 5 cut(s) 988, 1633, 1814, 2107, 2159
BspCNI CTCAG 7 cut(s) 545, 680, 725, 1339, 1911, 1933, 2110
BspDI ATCGAT 1 cut(s) 655
BspFNI CGCG 1 cut(s) 988
BspHI TCATGA 1 cut(s) 457
BspLI GGNNCC 4 cut(s) 687, 1339, 2105, 2142
BspMAI CTGCAG 2 cut(s) 1462, 1834
BspMI ACCTGC 1 cut(s) 1349
BspOI GCTAGC 1 cut(s) 1007
BspPI GGATC 5 cut(s) 1820, 1926, 2129, 2252, 2311
BspQI GCTCTTC 1 cut(s) 1409
BspT107I GGYRCC 2 cut(s) 1337, 2103
BspTNI GGTCTC 1 cut(s) 1010
BsrDI GCAATG 3 cut(s) 262, 1086, 1770
BsrFI RCCGGY 5 cut(s) 1398, 1531, 1649, 1950, 2100
BsrGI TGTACA 1 cut(s) 816
BsrI ACTGG 6 cut(s) 1477, 1847, 1881, 2036, 2042, 2067
BssAI RCCGGY 5 cut(s) 1398, 1531, 1649, 1950, 2100
BssECI CCNNGG 7 cut(s) 156, 681, 1050, 1224, 1433, 1722, 2249
BssMI GATC 8 cut(s) 488, 1522, 1825, 1918, 2051, 2134, 2257, 2316
BssNI GRCGYC 1 cut(s) 2104
BssT1I CCWWGG 4 cut(s) 156, 1050, 1433, 1722
Bst2UI CCWGG 2 cut(s) 1591, 1781
Bst4CI ACNGT 5 cut(s) 108, 629, 1441, 1520, 1559
Bst6I CTCTTC 6 cut(s) 918, 1019, 1125, 1262, 1409, 1848
BstACI GRCGYC 1 cut(s) 2104
BstAPI GCANNNNNTGC 2 cut(s) 980, 1466
BstAUI TGTACA 1 cut(s) 816
BstC8I GCNNGC 8 cut(s) 29, 829, 918, 1005, 1211, 1533, 1761, 2102
BstDSI CCRYGG 2 cut(s) 156, 1433
BstF5I GGATG 9 cut(s) 8, 58, 451, 480, 647, 772, 996, 1312, 1361
BstFNI CGCG 1 cut(s) 988
BstH2I RGCGCY 1 cut(s) 2107
BstHHI GCGC 4 cut(s) 194, 897, 988, 2106
BstKTI GATC 8 cut(s) 491, 1525, 1828, 1921, 2054, 2137, 2260, 2319
BstMAI GTCTC 1 cut(s) 1010
BstMBI GATC 8 cut(s) 488, 1522, 1825, 1918, 2051, 2134, 2257, 2316
BstNI CCWGG 2 cut(s) 1591, 1781
BstNSI RCATGY 1 cut(s) 817
BstSCI CCNGG 7 cut(s) 417, 1224, 1589, 1599, 1671, 1779, 2137
BstSFI CTRYAG 2 cut(s) 1458, 1830
BstSLI GKGCMC 2 cut(s) 139, 1518
BstUI CGCG 1 cut(s) 988
BstV2I GAAGAC 3 cut(s) 361, 483, 1401
BstX2I RGATCY 1 cut(s) 1918
BstXI CCANNNNNNTGG 3 cut(s) 163, 707, 1434
BstYI RGATCY 1 cut(s) 1918
Bsu15I ATCGAT 1 cut(s) 655
BsuI GTATCC 1 cut(s) 415
BsuTUI ATCGAT 1 cut(s) 655
BtgI CCRYGG 2 cut(s) 156, 1433
BtgZI GCGATG 2 cut(s) 236, 2162
BtrI CACGTC 1 cut(s) 2156
BtsCI GGATG 9 cut(s) 8, 58, 451, 480, 647, 772, 996, 1312, 1361
BtsI GCAGTG 1 cut(s) 1839
BtsIMutI CAGTG 2 cut(s) 1470, 1839
BveI ACCTGC 1 cut(s) 1349
Cac8I GCNNGC 8 cut(s) 29, 829, 918, 1005, 1211, 1533, 1761, 2102
CaiI CAGNNNCTG 1 cut(s) 473
CciI TCATGA 1 cut(s) 457
CfoI GCGC 4 cut(s) 194, 897, 988, 2106
Cfr10I RCCGGY 5 cut(s) 1398, 1531, 1649, 1950, 2100
Cfr13I GGNCC 7 cut(s) 166, 686, 1193, 1948, 2141, 2169, 2304
ClaI ATCGAT 1 cut(s) 655
CsiI ACCWGGT 1 cut(s) 1779
Csp6I GTAC 7 cut(s) 314, 817, 1338, 1372, 1653, 1806, 2039
CviQI GTAC 7 cut(s) 314, 817, 1338, 1372, 1653, 1806, 2039
DinI GGCGCC 1 cut(s) 2105
DpnI GATC 8 cut(s) 490, 1524, 1827, 1920, 2053, 2136, 2259, 2318
DpnII GATC 8 cut(s) 488, 1522, 1825, 1918, 2051, 2134, 2257, 2316
DraI TTTAAA 2 cut(s) 277, 568
EaeI YGGCCR 2 cut(s) 2125, 2267
Eam1104I CTCTTC 6 cut(s) 918, 1019, 1125, 1262, 1409, 1848
EarI CTCTTC 6 cut(s) 918, 1019, 1125, 1262, 1409, 1848
EciI GGCGGA 2 cut(s) 1829, 2148
Ecl136II GAGCTC 3 cut(s) 510, 868, 1897
Eco130I CCWWGG 4 cut(s) 156, 1050, 1433, 1722
Eco147I AGGCCT 1 cut(s) 1209
Eco24I GRGCYC 3 cut(s) 512, 870, 1899
Eco31I GGTCTC 1 cut(s) 1010
Eco47I GGWCC 6 cut(s) 166, 1193, 1948, 2141, 2169, 2304
Eco53kI GAGCTC 3 cut(s) 510, 868, 1897
Eco57I CTGAAG 5 cut(s) 111, 344, 495, 807, 942
Eco88I CYCGRG 2 cut(s) 43, 682
EcoICRI GAGCTC 3 cut(s) 510, 868, 1897
EcoO109I RGGNCCY 1 cut(s) 2169
EcoRII CCWGG 2 cut(s) 1589, 1779
EcoT14I CCWWGG 4 cut(s) 156, 1050, 1433, 1722
EcoT38I GRGCYC 3 cut(s) 512, 870, 1899
EgeI GGCGCC 1 cut(s) 2105
EheI GGCGCC 1 cut(s) 2105
ErhI CCWWGG 4 cut(s) 156, 1050, 1433, 1722
FalI AAGNNNNNCTT 6 cut(s) 342, 374, 900, 932, 1197, 1229
FaqI GGGAC 2 cut(s) 1583, 1759
FokI GGATG 8 cut(s) 65, 438, 467, 634, 779, 1003, 1299, 1368
FriOI GRGCYC 3 cut(s) 512, 870, 1899
FspBI CTAG 5 cut(s) 486, 1004, 1547, 1595, 2229
GlaI GCGC 4 cut(s) 193, 896, 987, 2105
HaeII RGCGCY 1 cut(s) 2107
HhaI GCGC 4 cut(s) 194, 897, 988, 2106
Hin1I GRCGYC 1 cut(s) 2104
Hin6I GCGC 4 cut(s) 192, 895, 986, 2104
HinP1I GCGC 4 cut(s) 192, 895, 986, 2104
HincII GTYRAC 3 cut(s) 383, 600, 625
HindII GTYRAC 3 cut(s) 383, 600, 625
HindIII AAGCTT 3 cut(s) 837, 914, 1387
HinfI GANTC 7 cut(s) 129, 470, 555, 677, 1744, 1790, 1969
HphI GGTGA 5 cut(s) 600, 782, 1481, 2278, 2326
Hpy166II GTNNAC 6 cut(s) 137, 383, 600, 625, 819, 1516
Hpy188III TCNNGA 9 cut(s) 45, 431, 458, 1243, 1408, 1900, 2144, 2190, 2213
Hpy8I GTNNAC 6 cut(s) 137, 383, 600, 625, 819, 1516
Hpy99I CGWCG 1 cut(s) 2219
HpyCH4III ACNGT 5 cut(s) 108, 629, 1441, 1520, 1559
HpyCH4IV ACGT 2 cut(s) 2155, 2217
HpySE526I ACGT 2 cut(s) 2155, 2217
Hsp92I GRCGYC 1 cut(s) 2104
HspAI GCGC 4 cut(s) 192, 895, 986, 2104
KasI GGCGCC 1 cut(s) 2103
KpnI GGTACC 1 cut(s) 1341
KroI GCCGGC 2 cut(s) 1531, 2100
KroNI GCCGGC 2 cut(s) 1533, 2102
Kzo9I GATC 8 cut(s) 488, 1522, 1825, 1918, 2051, 2134, 2257, 2316
LguI GCTCTTC 1 cut(s) 1409
LmnI GCTCC 4 cut(s) 507, 865, 873, 2309
LweI GCATC 8 cut(s) 43, 394, 644, 854, 970, 1346, 1613, 2033
MabI ACCWGGT 1 cut(s) 1779
MaeI CTAG 5 cut(s) 486, 1004, 1547, 1595, 2229
MaeII ACGT 2 cut(s) 2155, 2217
MaeIII GTNAC 3 cut(s) 725, 1621, 1737
MalI GATC 8 cut(s) 490, 1524, 1827, 1920, 2053, 2136, 2259, 2318
MboI GATC 8 cut(s) 488, 1522, 1825, 1918, 2051, 2134, 2257, 2316
MflI RGATCY 1 cut(s) 1918
MhlI GDGCHC 6 cut(s) 139, 512, 870, 1518, 1899, 2314
MluCI AATT 8 cut(s) 272, 494, 604, 794, 1032, 1274, 1464, 1728
Mly113I GGCGCC 1 cut(s) 2104
MlyI GAGTC 3 cut(s) 464, 549, 1799
MmeI TCCRAC 4 cut(s) 110, 1303, 2067, 2285
MroNI GCCGGC 2 cut(s) 1531, 2100
MseI TTAA 6 cut(s) 276, 567, 785, 1158, 1215, 2292
MslI CAYNNNNRTG 4 cut(s) 161, 255, 397, 456
MspR9I CCNGG 7 cut(s) 419, 1226, 1591, 1601, 1673, 1781, 2139
Mva1269I GAATGC 1 cut(s) 2014
MvaI CCWGG 2 cut(s) 1591, 1781
MvnI CGCG 1 cut(s) 988
NaeI GCCGGC 2 cut(s) 1533, 2102
NarI GGCGCC 1 cut(s) 2104
NciI CCSGG 5 cut(s) 419, 1226, 1601, 1673, 2139
NcoI CCATGG 2 cut(s) 156, 1433
NdeII GATC 8 cut(s) 488, 1522, 1825, 1918, 2051, 2134, 2257, 2316
NgoMIV GCCGGC 2 cut(s) 1531, 2100
NheI GCTAGC 1 cut(s) 1003
NlaIV GGNNCC 4 cut(s) 687, 1339, 2105, 2142
NmeAIII GCCGAG 2 cut(s) 121, 2230
NmuCI GTSAC 1 cut(s) 1621
NspI RCATGY 1 cut(s) 817
PaeR7I CTCGAG 1 cut(s) 43
PagI TCATGA 1 cut(s) 457
PceI AGGCCT 1 cut(s) 1209
PciI ACATGT 1 cut(s) 813
PciSI GCTCTTC 1 cut(s) 1409
PcsI WCGNNNNNNNCGW 1 cut(s) 2214
PctI GAATGC 1 cut(s) 2014
PdiI GCCGGC 2 cut(s) 1533, 2102
PfeI GAWTC 4 cut(s) 129, 677, 1744, 1969
PflMI CCANNNNNTGG 1 cut(s) 2086
PfoI TCCNGGA 1 cut(s) 417
PleI GAGTC 3 cut(s) 464, 549, 1798
PluTI GGCGCC 1 cut(s) 2107
PpsI GAGTC 3 cut(s) 464, 549, 1798
PpuMI RGGWCCY 1 cut(s) 2169
PscI ACATGT 1 cut(s) 813
PsiI TTATAA 1 cut(s) 1203
Psp124BI GAGCTC 3 cut(s) 512, 870, 1899
Psp5II RGGWCCY 1 cut(s) 2169
Psp6I CCWGG 2 cut(s) 1589, 1779
PspGI CCWGG 2 cut(s) 1589, 1779
PspN4I GGNNCC 4 cut(s) 687, 1339, 2105, 2142
PspPI GGNCC 7 cut(s) 166, 686, 1193, 1948, 2141, 2169, 2304
PspPPI RGGWCCY 1 cut(s) 2169
PstI CTGCAG 2 cut(s) 1462, 1834
PstNI CAGNNNCTG 1 cut(s) 473
PsuI RGATCY 1 cut(s) 1918
RsaI GTAC 7 cut(s) 315, 818, 1339, 1373, 1654, 1807, 2040
RsaNI GTAC 7 cut(s) 314, 817, 1338, 1372, 1653, 1806, 2039
RseI CAYNNNNRTG 4 cut(s) 161, 255, 397, 456
SacI GAGCTC 3 cut(s) 512, 870, 1899
SapI GCTCTTC 1 cut(s) 1409
SaqAI TTAA 6 cut(s) 276, 567, 785, 1158, 1215, 2292
Sau3AI GATC 8 cut(s) 488, 1522, 1825, 1918, 2051, 2134, 2257, 2316
Sau96I GGNCC 7 cut(s) 166, 686, 1193, 1948, 2141, 2169, 2304
SchI GAGTC 3 cut(s) 464, 549, 1799
ScrFI CCNGG 7 cut(s) 419, 1226, 1591, 1601, 1673, 1781, 2139
SduI GDGCHC 6 cut(s) 139, 512, 870, 1518, 1899, 2314
SexAI ACCWGGT 1 cut(s) 1779
SfaNI GCATC 8 cut(s) 43, 394, 644, 854, 970, 1346, 1613, 2033
SfcI CTRYAG 2 cut(s) 1458, 1830
SfoI GGCGCC 1 cut(s) 2105
Sfr274I CTCGAG 1 cut(s) 43
SinI GGWCC 6 cut(s) 166, 1193, 1948, 2141, 2169, 2304
SlaI CTCGAG 1 cut(s) 43
SmiMI CAYNNNNRTG 4 cut(s) 161, 255, 397, 456
SmlI CTYRAG 6 cut(s) 43, 429, 511, 1243, 1526, 2234
SmoI CTYRAG 6 cut(s) 43, 429, 511, 1243, 1526, 2234
Sse9I AATT 8 cut(s) 272, 494, 604, 794, 1032, 1274, 1464, 1728
SseBI AGGCCT 1 cut(s) 1209
SsiI CCGC 5 cut(s) 988, 1633, 1814, 2107, 2159
SspDI GGCGCC 1 cut(s) 2103
SspI AATATT 1 cut(s) 232
SspMI CTAG 5 cut(s) 486, 1004, 1547, 1595, 2229
SstI GAGCTC 3 cut(s) 512, 870, 1899
StuI AGGCCT 1 cut(s) 1209
StyD4I CCNGG 7 cut(s) 417, 1224, 1589, 1599, 1671, 1779, 2137
StyI CCWWGG 4 cut(s) 156, 1050, 1433, 1722
TaaI ACNGT 5 cut(s) 108, 629, 1441, 1520, 1559
TaiI ACGT 2 cut(s) 2158, 2220
TaqI TCGA 4 cut(s) 44, 124, 655, 2008
TasI AATT 8 cut(s) 272, 494, 604, 794, 1032, 1274, 1464, 1728
TatI WGTACW 2 cut(s) 816, 1371
TauI GCSGC 1 cut(s) 2109
TfiI GAWTC 4 cut(s) 129, 677, 1744, 1969
Tru1I TTAA 6 cut(s) 276, 567, 785, 1158, 1215, 2292
Tru9I TTAA 6 cut(s) 276, 567, 785, 1158, 1215, 2292
TscAI CASTG 2 cut(s) 1477, 1839
TseFI GTSAC 1 cut(s) 1621
Tsp45I GTSAC 1 cut(s) 1621
TspDTI ATGAA 3 cut(s) 191, 605, 636
TspGWI ACGGA 2 cut(s) 1398, 1433
TspRI CASTG 2 cut(s) 1477, 1839
Van91I CCANNNNNTGG 1 cut(s) 2086
VneI GTGCAC 2 cut(s) 135, 1514
VpaK11BI GGWCC 6 cut(s) 166, 1193, 1948, 2141, 2169, 2304
XapI RAATTY 2 cut(s) 272, 604
XceI RCATGY 1 cut(s) 817
XcmI CCANNNNNNNNNTGG 1 cut(s) 458
XhoI CTCGAG 1 cut(s) 43
XspI CTAG 5 cut(s) 486, 1004, 1547, 1595, 2229
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.