Rmu_sc0007869.1_g000029

Belongs to the phosphohexose mutase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007869.1
Physical Location & Seq
Reverse (-)
126500 .. 129841
3342 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007869.1_g000029.1.cds

Sequence Viewer

Length: 1650 bp
atgaatgaagaccaacgctcactcctcctcagctcctcatctcgcttcccacctccacaaggagtgaagctatcatatggaacggctgggttcagagcggatgcctcgattcttcaatccacggtttacagggtgggaatattagcagctcttagagcagtgaagacccaatcagtaattgggctgatgatcacagcctctcacaacaaaatatctgataatggaatcaaagttgctgaccctagtggtggaatgctttctcaagattgggagccctttgcggatacacttgccaatgcctgtgatccccaacaactcgttcagttgataactgaatttgtggaaaatgaaaaaatcacacttgatggagctaagtcggtggagattttactggcaagagatacaagacccagtggtgaatctctgcttgaagctgctaaacagggaatcagttccattattggagcagttgcccttgacatgggaattttaacaaccccaacactccattggatggttcgtgctagaaataagggtgccaaagcatcggaaatggattactttgagcagctgtccagtggatctaacaccatcaatgaggcagacaagttggttgtagatggggctaatggtgttggcggagaaaaactcgaaatcttgaagaagatgttgactggtttggttattgatgttcggaactctggaaaagaaggaggtgtactcaatgacggagttggtgctgattatgtgcagaaagagaaggttgctccatctggttttggttcacaagatgttgggataaggtgttgtagcttggatggtgatgctgatcgacttgtatattttattgtgccatctacaagtagtagtaagatcgaacttgttgatggggacaagatattatcattgtttgctgtattcatcaaggagcaactaagcatcttgaataagaaaagagatgttaatgtgaatgatgattatcactgctgtcttggtattgtgcaaacggcctatgcaaatggagcatccacagattatcttaaacagttaggcctggaagtcattttcactcctacaggtgtgaagtacctgcatgagaaagcagcacagtatgatattggaatatattttgaggcaaatggccatggcaccatcttgttctcagaaaaattcttgtgttggttagaggccaagattactgagttttctgatgtagctaaaggttcggaaccacataaggcagctatgagactcttggcggtcacaaaattgattaaccctgctgttggagatgctttgagtgggatgctcttggttgaggccattttacaacatatgggatggtcaatagagaaatggaatgagctttatcatgatctaccaagtaggcagctgaaggtcaaagttgtagacagaactgctgttgtcacagcaaatgcagagactgtggttgcgaagccccctggcattcaagaagctattaacgctgaaactgctaagtaccctagaggccggtgttttatacgaccatcgggaacagaagatgttatacgtgtatatgcagaggcatccacagagaatgcagcagacagcttagccagttctgtggcaaaacttgtagaccaaaaacttggatctggcacctcatga

Protein Analysis

549

Amino Acids

59.06

Weight (kDa)

5.41

Isoelectric Point (pI)

32.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1098
AccB1I GGYRCC 3 cut(s) 536, 1148, 1640
AccB7I CCANNNNNTGG 1 cut(s) 514
AccBSI CCGCTC 1 cut(s) 98
AccI GTMKAC 2 cut(s) 1410, 1620
AciI CCGC 4 cut(s) 98, 281, 639, 1259
AclWI GGATC 3 cut(s) 299, 589, 1642
AcoI YGGCCR 1 cut(s) 1141
AcsI RAATTY 3 cut(s) 335, 486, 1169
AcuI CTGAAG 1 cut(s) 1415
AfaI GTAC 3 cut(s) 720, 1088, 1502
AfiI CCNNNNNNNGG 5 cut(s) 59, 248, 481, 514, 1286
AflIII ACRYGT 1 cut(s) 1552
AgsI TTSAA 5 cut(s) 116, 431, 661, 946, 1472
AjnI CCWGG 2 cut(s) 1053, 1462
AjuI GAANNNNNNNTTGG 2 cut(s) 303, 335
Alw26I GTCTC 2 cut(s) 1243, 1436
AlwI GGATC 3 cut(s) 299, 589, 1642
AlwNI CAGNNNCTG 1 cut(s) 1445
AoxI GGCC 6 cut(s) 1008, 1051, 1141, 1188, 1320, 1510
ApeKI GCWGC 7 cut(s) 146, 434, 568, 1103, 1241, 1390, 1583
ApoI RAATTY 3 cut(s) 335, 486, 1169
Asp700I GAANNNNTTC 2 cut(s) 256, 451
AsuHPI GGTGA 2 cut(s) 428, 833
BalI TGGCCA 1 cut(s) 1143
BanI GGYRCC 3 cut(s) 536, 1148, 1640
BanII GRGCYC 1 cut(s) 276
BarI GAAGNNNNNNTAC 4 cut(s) 702, 734, 1533, 1565
BbsI GAAGAC 2 cut(s) 15, 170
BbvCI CCTCAGC 1 cut(s) 29
BbvI GCAGC 7 cut(s) 158, 421, 580, 1115, 1253, 1402, 1595
BceAI ACGGC 2 cut(s) 99, 1023
BciT130I CCWGG 2 cut(s) 1055, 1464
BciVI GTATCC 1 cut(s) 277
BclI TGATCA 1 cut(s) 189
BcoDI GTCTC 2 cut(s) 1243, 1436
BfaI CTAG 3 cut(s) 243, 525, 1506
BfmI CTRYAG 1 cut(s) 1074
BfuAI ACCTGC 1 cut(s) 1098
BfuI GTATCC 1 cut(s) 277
BisI GCNGC 7 cut(s) 147, 435, 569, 1104, 1242, 1391, 1584
BlpI GCTNAGC 1 cut(s) 1594
BlsI GCNGC 7 cut(s) 148, 436, 570, 1105, 1243, 1392, 1585
Bme1390I CCNGG 2 cut(s) 1055, 1464
BmiI GGNNCC 5 cut(s) 273, 538, 1150, 1230, 1642
BmrFI CCNGG 2 cut(s) 1055, 1464
BmrI ACTGGG 1 cut(s) 405
BmsI GCATC 8 cut(s) 91, 554, 814, 948, 1034, 1282, 1296, 1577
BmuI ACTGGG 1 cut(s) 405
BpiI GAAGAC 2 cut(s) 15, 170
BplI GAGNNNNNCTC 4 cut(s) 633, 665, 705, 737
Bpu10I CCTNAGC 1 cut(s) 29
Bpu1102I GCTNAGC 1 cut(s) 1594
BpuEI CTTGAG 1 cut(s) 246
BsaAI YACGTR 1 cut(s) 1553
BsaBI GATNNNNATC 2 cut(s) 828, 978
BsaJI CCNNGG 3 cut(s) 120, 1144, 1462
BsaXI ACNNNNNCTCC 2 cut(s) 6, 36
Bsc4I CCNNNNNNNGG 5 cut(s) 59, 248, 481, 514, 1286
Bse118I RCCGGY 1 cut(s) 1512
Bse1I ACTGG 5 cut(s) 396, 411, 576, 679, 1599
Bse8I GATNNNNATC 2 cut(s) 828, 978
BseBI CCWGG 2 cut(s) 1055, 1464
BseDI CCNNGG 3 cut(s) 120, 1144, 1462
BseGI GGATG 7 cut(s) 106, 519, 823, 1025, 1311, 1346, 1568
BseJI GATNNNNATC 2 cut(s) 828, 978
BseLI CCNNNNNNNGG 5 cut(s) 59, 248, 481, 514, 1286
BseMII CTCAG 3 cut(s) 43, 1176, 1191
BseNI ACTGG 5 cut(s) 396, 411, 576, 679, 1599
BseRI GAGGAG 3 cut(s) 14, 17, 25
BseXI GCAGC 7 cut(s) 158, 421, 580, 1115, 1253, 1402, 1595
BseYI CCCAGC 1 cut(s) 86
BsgI GTGCAG 1 cut(s) 770
BshFI GGCC 6 cut(s) 1010, 1053, 1143, 1190, 1322, 1512
BshNI GGYRCC 3 cut(s) 536, 1148, 1640
BsiSI CCGG 1 cut(s) 1513
BslFI GGGAC 1 cut(s) 905
BslI CCNNNNNNNGG 5 cut(s) 59, 248, 481, 514, 1286
BsmAI GTCTC 2 cut(s) 1243, 1436
BsmFI GGGAC 1 cut(s) 905
BsmI GAATGC 3 cut(s) 258, 1467, 1585
BsnI GGCC 6 cut(s) 1010, 1053, 1143, 1190, 1322, 1512
Bsp1286I GDGCHC 1 cut(s) 276
Bsp143I GATC 7 cut(s) 189, 304, 581, 829, 873, 1375, 1634
Bsp1720I GCTNAGC 1 cut(s) 1594
Bsp19I CCATGG 1 cut(s) 1144
BspACI CCGC 4 cut(s) 98, 281, 639, 1259
BspANI GGCC 6 cut(s) 1010, 1053, 1143, 1190, 1322, 1512
BspCNI CTCAG 3 cut(s) 42, 1175, 1192
BspHI TCATGA 2 cut(s) 1372, 1646
BspLI GGNNCC 5 cut(s) 273, 538, 1150, 1230, 1642
BspMI ACCTGC 1 cut(s) 1098
BspPI GGATC 3 cut(s) 299, 589, 1642
BspT107I GGYRCC 3 cut(s) 536, 1148, 1640
BsrBI CCGCTC 1 cut(s) 98
BsrFI RCCGGY 1 cut(s) 1512
BsrI ACTGG 5 cut(s) 396, 411, 576, 679, 1599
BssAI RCCGGY 1 cut(s) 1512
BssECI CCNNGG 3 cut(s) 120, 1144, 1462
BssMI GATC 7 cut(s) 189, 304, 581, 829, 873, 1375, 1634
BssT1I CCWWGG 1 cut(s) 1144
Bst2UI CCWGG 2 cut(s) 1055, 1464
Bst4CI ACNGT 4 cut(s) 124, 1047, 1110, 1447
BstBAI YACGTR 1 cut(s) 1553
BstDEI CTNAG 8 cut(s) 29, 152, 372, 935, 1162, 1200, 1497, 1594
BstDSI CCRYGG 2 cut(s) 120, 1144
BstENI CCTNNNNNAGG 1 cut(s) 57
BstF5I GGATG 7 cut(s) 106, 519, 823, 1025, 1311, 1346, 1568
BstKTI GATC 7 cut(s) 192, 307, 584, 832, 876, 1378, 1637
BstMAI GTCTC 2 cut(s) 1243, 1436
BstMBI GATC 7 cut(s) 189, 304, 581, 829, 873, 1375, 1634
BstMWI GCNNNNNNNGC 4 cut(s) 155, 1022, 1484, 1493
BstNI CCWGG 2 cut(s) 1055, 1464
BstSCI CCNGG 2 cut(s) 1053, 1462
BstSFI CTRYAG 1 cut(s) 1074
BstV1I GCAGC 7 cut(s) 158, 421, 580, 1115, 1253, 1402, 1595
BstV2I GAAGAC 2 cut(s) 15, 170
BstX2I RGATCY 2 cut(s) 581, 1634
BstXI CCANNNNNNTGG 2 cut(s) 1606, 1631
BstYI RGATCY 2 cut(s) 581, 1634
BsuI GTATCC 1 cut(s) 277
BsuRI GGCC 6 cut(s) 1010, 1053, 1143, 1190, 1322, 1512
BtgI CCRYGG 2 cut(s) 120, 1144
BtsCI GGATG 7 cut(s) 106, 519, 823, 1025, 1311, 1346, 1568
BtsI GCAGTG 2 cut(s) 165, 982
BtsIMutI CAGTG 4 cut(s) 165, 418, 583, 982
BveI ACCTGC 1 cut(s) 1098
CaiI CAGNNNCTG 1 cut(s) 1445
CciI TCATGA 2 cut(s) 1372, 1646
Cfr10I RCCGGY 1 cut(s) 1512
Csp6I GTAC 3 cut(s) 719, 1087, 1501
CviAII CATG 5 cut(s) 481, 1094, 1145, 1373, 1647
CviQI GTAC 3 cut(s) 719, 1087, 1501
DdeI CTNAG 8 cut(s) 29, 152, 372, 935, 1162, 1200, 1497, 1594
DpnI GATC 7 cut(s) 191, 306, 583, 831, 875, 1377, 1636
DpnII GATC 7 cut(s) 189, 304, 581, 829, 873, 1375, 1634
EaeI YGGCCR 1 cut(s) 1141
EciI GGCGGA 1 cut(s) 654
Eco130I CCWWGG 1 cut(s) 1144
Eco147I AGGCCT 1 cut(s) 1053
Eco24I GRGCYC 1 cut(s) 276
Eco57I CTGAAG 1 cut(s) 1415
EcoNI CCTNNNNNAGG 1 cut(s) 57
EcoRII CCWGG 2 cut(s) 1053, 1462
EcoT14I CCWWGG 1 cut(s) 1144
EcoT38I GRGCYC 1 cut(s) 276
ErhI CCWWGG 1 cut(s) 1144
FaeI CATG 5 cut(s) 484, 1097, 1148, 1376, 1650
FaqI GGGAC 1 cut(s) 905
FatI CATG 5 cut(s) 480, 1093, 1144, 1372, 1646
FauNDI CATATG 2 cut(s) 76, 1335
FbaI TGATCA 1 cut(s) 189
FblI GTMKAC 2 cut(s) 1410, 1620
Fnu4HI GCNGC 7 cut(s) 147, 435, 569, 1104, 1242, 1391, 1584
FokI GGATG 7 cut(s) 113, 526, 830, 1012, 1318, 1353, 1555
FriOI GRGCYC 1 cut(s) 276
Fsp4HI GCNGC 7 cut(s) 147, 435, 569, 1104, 1242, 1391, 1584
FspBI CTAG 3 cut(s) 243, 525, 1506
GluI GCNGC 7 cut(s) 147, 435, 569, 1104, 1242, 1391, 1584
GsaI CCCAGC 1 cut(s) 90
HaeIII GGCC 6 cut(s) 1010, 1053, 1143, 1190, 1322, 1512
HapII CCGG 1 cut(s) 1513
Hin1II CATG 5 cut(s) 484, 1097, 1148, 1376, 1650
HincII GTYRAC 1 cut(s) 672
HindII GTYRAC 1 cut(s) 672
HinfI GANTC 5 cut(s) 109, 225, 419, 447, 1251
HpaII CCGG 1 cut(s) 1513
HphI GGTGA 2 cut(s) 428, 833
Hpy166II GTNNAC 6 cut(s) 127, 672, 719, 785, 1411, 1621
Hpy188I TCNGA 7 cut(s) 95, 217, 550, 696, 1165, 1210, 1228
Hpy188III TCNNGA 8 cut(s) 263, 658, 702, 943, 1373, 1472, 1533, 1647
Hpy8I GTNNAC 6 cut(s) 127, 672, 719, 785, 1411, 1621
HpyAV CCTTC 3 cut(s) 704, 754, 1390
HpyCH4III ACNGT 4 cut(s) 124, 1047, 1110, 1447
HpyCH4IV ACGT 1 cut(s) 1552
HpyCH4V TGCA 7 cut(s) 751, 1003, 1016, 1093, 1439, 1562, 1583
HpyF10VI GCNNNNNNNGC 4 cut(s) 155, 1022, 1484, 1493
HpyF3I CTNAG 8 cut(s) 29, 152, 372, 935, 1162, 1200, 1497, 1594
HpySE526I ACGT 1 cut(s) 1552
Hsp92II CATG 5 cut(s) 484, 1097, 1148, 1376, 1650
Ksp22I TGATCA 1 cut(s) 189
Kzo9I GATC 7 cut(s) 189, 304, 581, 829, 873, 1375, 1634
LmnI GCTCC 7 cut(s) 38, 271, 368, 464, 772, 928, 1022
Lsp1109I GCAGC 7 cut(s) 158, 421, 580, 1115, 1253, 1402, 1595
LweI GCATC 8 cut(s) 91, 554, 814, 948, 1034, 1282, 1296, 1577
MaeI CTAG 3 cut(s) 243, 525, 1506
MaeII ACGT 1 cut(s) 1552
MaeIII GTNAC 2 cut(s) 1261, 1426
MalI GATC 7 cut(s) 191, 306, 583, 831, 875, 1377, 1636
MbiI CCGCTC 1 cut(s) 98
MboI GATC 7 cut(s) 189, 304, 581, 829, 873, 1375, 1634
MboII GAAGA 6 cut(s) 20, 104, 175, 673, 676, 1553
MflI RGATCY 2 cut(s) 581, 1634
MhlI GDGCHC 1 cut(s) 276
MlsI TGGCCA 1 cut(s) 1143
MluCI AATT 5 cut(s) 177, 335, 486, 1169, 1268
MluNI TGGCCA 1 cut(s) 1143
MlyI GAGTC 1 cut(s) 1245
MmeI TCCRAC 1 cut(s) 1267
Mox20I TGGCCA 1 cut(s) 1143
MroXI GAANNNNTTC 2 cut(s) 256, 451
MscI TGGCCA 1 cut(s) 1143
MseI TTAA 5 cut(s) 491, 963, 1041, 1275, 1482
Msp20I TGGCCA 1 cut(s) 1143
MspA1I CMGCKG 2 cut(s) 571, 1393
MspI CCGG 1 cut(s) 1513
MspR9I CCNGG 2 cut(s) 1055, 1464
Mva1269I GAATGC 3 cut(s) 258, 1467, 1585
MvaI CCWGG 2 cut(s) 1055, 1464
MwoI GCNNNNNNNGC 4 cut(s) 155, 1022, 1484, 1493
NcoI CCATGG 1 cut(s) 1144
NdeI CATATG 2 cut(s) 76, 1335
NdeII GATC 7 cut(s) 189, 304, 581, 829, 873, 1375, 1634
NlaIII CATG 5 cut(s) 484, 1097, 1148, 1376, 1650
NlaIV GGNNCC 5 cut(s) 273, 538, 1150, 1230, 1642
NmuCI GTSAC 2 cut(s) 1261, 1426
PagI TCATGA 2 cut(s) 1372, 1646
PceI AGGCCT 1 cut(s) 1053
PctI GAATGC 3 cut(s) 258, 1467, 1585
PdmI GAANNNNTTC 2 cut(s) 256, 451
PfeI GAWTC 4 cut(s) 109, 225, 419, 447
PflMI CCANNNNNTGG 1 cut(s) 514
PkrI GCNGC 7 cut(s) 148, 436, 570, 1105, 1243, 1392, 1585
PleI GAGTC 1 cut(s) 1245
PpsI GAGTC 1 cut(s) 1245
Ppu21I YACGTR 1 cut(s) 1553
Psp6I CCWGG 2 cut(s) 1053, 1462
PspFI CCCAGC 1 cut(s) 86
PspGI CCWGG 2 cut(s) 1053, 1462
PspN4I GGNNCC 5 cut(s) 273, 538, 1150, 1230, 1642
PstNI CAGNNNCTG 1 cut(s) 1445
PsuI RGATCY 2 cut(s) 581, 1634
PvuII CAGCTG 2 cut(s) 571, 1393
RsaI GTAC 3 cut(s) 720, 1088, 1502
RsaNI GTAC 3 cut(s) 719, 1087, 1501
SaqAI TTAA 5 cut(s) 491, 963, 1041, 1275, 1482
SatI GCNGC 7 cut(s) 147, 435, 569, 1104, 1242, 1391, 1584
Sau3AI GATC 7 cut(s) 189, 304, 581, 829, 873, 1375, 1634
SchI GAGTC 1 cut(s) 1245
ScrFI CCNGG 2 cut(s) 1055, 1464
SduI GDGCHC 1 cut(s) 276
SfaNI GCATC 8 cut(s) 91, 554, 814, 948, 1034, 1282, 1296, 1577
SfcI CTRYAG 1 cut(s) 1074
SmlI CTYRAG 1 cut(s) 261
SmoI CTYRAG 1 cut(s) 261
Sse9I AATT 5 cut(s) 177, 335, 486, 1169, 1268
SseBI AGGCCT 1 cut(s) 1053
SsiI CCGC 4 cut(s) 98, 281, 639, 1259
SspI AATATT 1 cut(s) 141
SspMI CTAG 3 cut(s) 243, 525, 1506
StuI AGGCCT 1 cut(s) 1053
StyD4I CCNGG 2 cut(s) 1053, 1462
StyI CCWWGG 1 cut(s) 1144
TaaI ACNGT 4 cut(s) 124, 1047, 1110, 1447
TaiI ACGT 1 cut(s) 1555
TaqI TCGA 4 cut(s) 107, 651, 832, 876
TasI AATT 5 cut(s) 177, 335, 486, 1169, 1268
TatI WGTACW 1 cut(s) 718
TfiI GAWTC 4 cut(s) 109, 225, 419, 447
Tru1I TTAA 5 cut(s) 491, 963, 1041, 1275, 1482
Tru9I TTAA 5 cut(s) 491, 963, 1041, 1275, 1482
TscAI CASTG 4 cut(s) 165, 418, 583, 989
TseFI GTSAC 2 cut(s) 1261, 1426
TseI GCWGC 7 cut(s) 146, 434, 568, 1103, 1241, 1390, 1583
Tsp45I GTSAC 2 cut(s) 1261, 1426
TspDTI ATGAA 4 cut(s) 17, 21, 363, 910
TspGWI ACGGA 1 cut(s) 744
TspRI CASTG 4 cut(s) 165, 418, 583, 989
Van91I CCANNNNNTGG 1 cut(s) 514
XagI CCTNNNNNAGG 1 cut(s) 57
XapI RAATTY 3 cut(s) 335, 486, 1169
XcmI CCANNNNNNNNNTGG 2 cut(s) 176, 507
XmiI GTMKAC 2 cut(s) 1410, 1620
XmnI GAANNNNTTC 2 cut(s) 256, 451
XspI CTAG 3 cut(s) 243, 525, 1506
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.