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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G08630 AT4G08630 AT5G13260 |
| fragaria_vesca | FvH4_4g22850 FvH4_4g22850 FvH4_4g22850 FvH4_4g22850 FvH4_4g22850 |
| malus_domestica | MD13G1129100.v1.1 MD16G1129000.v1.1 |
| prunus_persica | Prupe.1G217300_v2.0.a1 |
| pyrus_communis | pycom13g11210 pycom16g10940 |
| rosa_chinensis | RchiOBHm_Chr4g0429091 |
| rosa_laevigata | RLG00000007098 |
| rosa_multiflora | Rmu_sc0000846.1_g000019 Rmu_sc0008629.1_g000025 |
| rosa_roxburghii | Rroxscaffold_5G00370720 |
| rosa_rugosa | Rorug04G0233000 |
| rosa_samantha | Rh4AG288700 Rh4BG294800 Rh4CG310300 Rh4DG291800 |
| rosa_wichuraiana | Rw4G025020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 552 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 55 |
| Acc36I | ACCTGC | 1 cut(s) | 325 |
| AccB1I | GGYRCC | 1 cut(s) | 445 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 818 |
| AccI | GTMKAC | 2 cut(s) | 13, 33 |
| AccII | CGCG | 4 cut(s) | 110, 112, 365, 1615 |
| AccIII | TCCGGA | 1 cut(s) | 59 |
| AclWI | GGATC | 4 cut(s) | 927, 1154, 1355, 1595 |
| AcoI | YGGCCR | 1 cut(s) | 100 |
| AcuI | CTGAAG | 3 cut(s) | 936, 1007, 1289 |
| AdeI | CACNNNGTG | 1 cut(s) | 596 |
| AfaI | GTAC | 3 cut(s) | 260, 1064, 1461 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 98, 193, 690, 818, 1603 |
| AgsI | TTSAA | 4 cut(s) | 701, 1195, 1241, 1252 |
| AjnI | CCWGG | 1 cut(s) | 1139 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 325, 357 |
| Alw21I | GWGCWC | 2 cut(s) | 268, 1596 |
| Alw26I | GTCTC | 1 cut(s) | 93 |
| AlwI | GGATC | 4 cut(s) | 927, 1154, 1355, 1595 |
| Aor13HI | TCCGGA | 1 cut(s) | 59 |
| AoxI | GGCC | 3 cut(s) | 100, 201, 834 |
| ApeKI | GCWGC | 8 cut(s) | 173, 176, 431, 713, 767, 788, 881, 1022 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 981, 1494 |
| AspLEI | GCGC | 3 cut(s) | 112, 186, 1617 |
| AspS9I | GGNCC | 5 cut(s) | 4, 18, 48, 114, 493 |
| AsuC2I | CCSGG | 3 cut(s) | 29, 306, 331 |
| AsuHPI | GGTGA | 2 cut(s) | 351, 1344 |
| AvaII | GGWCC | 5 cut(s) | 4, 18, 48, 114, 493 |
| BalI | TGGCCA | 1 cut(s) | 102 |
| BanI | GGYRCC | 1 cut(s) | 445 |
| BanII | GRGCYC | 1 cut(s) | 424 |
| BbsI | GAAGAC | 1 cut(s) | 473 |
| Bbv12I | GWGCWC | 2 cut(s) | 268, 1596 |
| BbvCI | CCTCAGC | 1 cut(s) | 409 |
| BbvI | GCAGC | 8 cut(s) | 160, 163, 443, 700, 754, 775, 893, 1009 |
| BccI | CCATC | 1 cut(s) | 964 |
| BciT130I | CCWGG | 1 cut(s) | 1141 |
| BciVI | GTATCC | 2 cut(s) | 379, 544 |
| BcnI | CCSGG | 3 cut(s) | 29, 306, 331 |
| BcoDI | GTCTC | 1 cut(s) | 93 |
| BfaI | CTAG | 1 cut(s) | 348 |
| BfoI | RGCGCY | 1 cut(s) | 187 |
| BfuAI | ACCTGC | 1 cut(s) | 325 |
| BfuI | GTATCC | 2 cut(s) | 379, 544 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 170 |
| BlpI | GCTNAGC | 1 cut(s) | 180 |
| Bme1390I | CCNGG | 4 cut(s) | 29, 306, 331, 1141 |
| Bme18I | GGWCC | 5 cut(s) | 4, 18, 48, 114, 493 |
| BmgT120I | GGNCC | 5 cut(s) | 4, 18, 48, 114, 493 |
| BmiI | GGNNCC | 4 cut(s) | 70, 324, 447, 495 |
| BmrFI | CCNGG | 4 cut(s) | 29, 306, 331, 1141 |
| BmrI | ACTGGG | 1 cut(s) | 1021 |
| BmsI | GCATC | 3 cut(s) | 401, 848, 1531 |
| BmuI | ACTGGG | 1 cut(s) | 1021 |
| BoxI | GACNNNNGTC | 2 cut(s) | 9, 1389 |
| BpiI | GAAGAC | 1 cut(s) | 473 |
| BpmI | CTGGAG | 2 cut(s) | 63, 1227 |
| Bpu10I | CCTNAGC | 3 cut(s) | 192, 409, 1081 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 180 |
| BpuEI | CTTGAG | 1 cut(s) | 1408 |
| BpuMI | CCSGG | 3 cut(s) | 29, 306, 331 |
| BsaAI | YACGTR | 1 cut(s) | 1007 |
| BsaBI | GATNNNNATC | 2 cut(s) | 532, 1158 |
| BsaJI | CCNNGG | 4 cut(s) | 168, 1128, 1140, 1641 |
| BsaWI | WCCGGW | 5 cut(s) | 6, 59, 91, 215, 255 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 325, 355, 714, 744 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 98, 193, 690, 818, 1603 |
| Bse118I | RCCGGY | 2 cut(s) | 1354, 1596 |
| Bse1I | ACTGG | 4 cut(s) | 343, 1016, 1210, 1656 |
| Bse3DI | GCAATG | 2 cut(s) | 90, 1479 |
| Bse8I | GATNNNNATC | 2 cut(s) | 532, 1158 |
| BseAI | TCCGGA | 1 cut(s) | 59 |
| BseBI | CCWGG | 1 cut(s) | 1141 |
| BseDI | CCNNGG | 4 cut(s) | 168, 1128, 1140, 1641 |
| BseGI | GGATG | 1 cut(s) | 1414 |
| BseJI | GATNNNNATC | 2 cut(s) | 532, 1158 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 98, 193, 690, 818, 1603 |
| BseMI | GCAATG | 2 cut(s) | 90, 1479 |
| BseMII | CTCAG | 6 cut(s) | 167, 194, 206, 423, 1395, 1588 |
| BseNI | ACTGG | 4 cut(s) | 343, 1016, 1210, 1656 |
| BseRI | GAGGAG | 7 cut(s) | 78, 81, 109, 1077, 1292, 1412, 1487 |
| BseXI | GCAGC | 8 cut(s) | 160, 163, 443, 700, 754, 775, 893, 1009 |
| BsgI | GTGCAG | 3 cut(s) | 450, 878, 1062 |
| Bsh1236I | CGCG | 4 cut(s) | 110, 112, 365, 1615 |
| BshFI | GGCC | 3 cut(s) | 102, 203, 836 |
| BshNI | GGYRCC | 1 cut(s) | 445 |
| BsiHKAI | GWGCWC | 2 cut(s) | 268, 1596 |
| BslFI | GGGAC | 1 cut(s) | 288 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 98, 193, 690, 818, 1603 |
| BsmAI | GTCTC | 1 cut(s) | 93 |
| BsmFI | GGGAC | 1 cut(s) | 288 |
| BsmI | GAATGC | 1 cut(s) | 298 |
| BsnI | GGCC | 3 cut(s) | 102, 203, 836 |
| Bsp1286I | GDGCHC | 3 cut(s) | 268, 424, 1596 |
| Bsp13I | TCCGGA | 1 cut(s) | 59 |
| Bsp143I | GATC | 7 cut(s) | 244, 350, 571, 932, 1159, 1360, 1587 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 180 |
| BspANI | GGCC | 3 cut(s) | 102, 203, 836 |
| BspCNI | CTCAG | 6 cut(s) | 166, 193, 205, 422, 1396, 1587 |
| BspEI | TCCGGA | 1 cut(s) | 59 |
| BspFNI | CGCG | 4 cut(s) | 110, 112, 365, 1615 |
| BspLI | GGNNCC | 4 cut(s) | 70, 324, 447, 495 |
| BspMI | ACCTGC | 1 cut(s) | 325 |
| BspPI | GGATC | 4 cut(s) | 927, 1154, 1355, 1595 |
| BspQI | GCTCTTC | 3 cut(s) | 429, 615, 1444 |
| BspT107I | GGYRCC | 1 cut(s) | 445 |
| BsrDI | GCAATG | 2 cut(s) | 90, 1479 |
| BsrFI | RCCGGY | 2 cut(s) | 1354, 1596 |
| BsrI | ACTGG | 4 cut(s) | 343, 1016, 1210, 1656 |
| BssAI | RCCGGY | 2 cut(s) | 1354, 1596 |
| BssECI | CCNNGG | 4 cut(s) | 168, 1128, 1140, 1641 |
| BssMI | GATC | 7 cut(s) | 244, 350, 571, 932, 1159, 1360, 1587 |
| BssT1I | CCWWGG | 2 cut(s) | 168, 1128 |
| Bst2UI | CCWGG | 1 cut(s) | 1141 |
| Bst4CI | ACNGT | 6 cut(s) | 263, 302, 463, 505, 1034, 1645 |
| Bst6I | CTCTTC | 6 cut(s) | 429, 615, 654, 849, 1095, 1444 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1049 |
| BstBAI | YACGTR | 1 cut(s) | 1007 |
| BstC8I | GCNNGC | 4 cut(s) | 127, 1233, 1260, 1293 |
| BstDEI | CTNAG | 9 cut(s) | 153, 180, 192, 379, 409, 1059, 1081, 1404, 1574 |
| BstDSI | CCRYGG | 1 cut(s) | 1641 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 191 |
| BstF5I | GGATG | 1 cut(s) | 1414 |
| BstFNI | CGCG | 4 cut(s) | 110, 112, 365, 1615 |
| BstH2I | RGCGCY | 1 cut(s) | 187 |
| BstHHI | GCGC | 3 cut(s) | 112, 186, 1617 |
| BstKTI | GATC | 7 cut(s) | 247, 353, 574, 935, 1162, 1363, 1590 |
| BstMAI | GTCTC | 1 cut(s) | 93 |
| BstMBI | GATC | 7 cut(s) | 244, 350, 571, 932, 1159, 1360, 1587 |
| BstNI | CCWGG | 1 cut(s) | 1141 |
| BstNSI | RCATGY | 1 cut(s) | 1526 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 9, 1389 |
| BstSCI | CCNGG | 4 cut(s) | 27, 304, 329, 1139 |
| BstUI | CGCG | 4 cut(s) | 110, 112, 365, 1615 |
| BstV1I | GCAGC | 8 cut(s) | 160, 163, 443, 700, 754, 775, 893, 1009 |
| BstV2I | GAAGAC | 1 cut(s) | 473 |
| BsuI | GTATCC | 2 cut(s) | 379, 544 |
| BsuRI | GGCC | 3 cut(s) | 102, 203, 836 |
| BtgI | CCRYGG | 1 cut(s) | 1641 |
| BtgZI | GCGATG | 1 cut(s) | 1006 |
| BtsCI | GGATG | 1 cut(s) | 1414 |
| BtsI | GCAGTG | 2 cut(s) | 590, 1522 |
| BtsIMutI | CAGTG | 4 cut(s) | 268, 468, 590, 1522 |
| BveI | ACCTGC | 1 cut(s) | 325 |
| Cac8I | GCNNGC | 4 cut(s) | 127, 1233, 1260, 1293 |
| CfoI | GCGC | 3 cut(s) | 112, 186, 1617 |
| Cfr10I | RCCGGY | 2 cut(s) | 1354, 1596 |
| Cfr13I | GGNCC | 5 cut(s) | 4, 18, 48, 114, 493 |
| CpoI | CGGWCCG | 1 cut(s) | 18 |
| Csp6I | GTAC | 3 cut(s) | 259, 1063, 1460 |
| CspI | CGGWCCG | 1 cut(s) | 18 |
| CviAII | CATG | 6 cut(s) | 626, 653, 937, 1463, 1523, 1538 |
| CviQI | GTAC | 3 cut(s) | 259, 1063, 1460 |
| DdeI | CTNAG | 9 cut(s) | 153, 180, 192, 379, 409, 1059, 1081, 1404, 1574 |
| DpnI | GATC | 7 cut(s) | 246, 352, 573, 934, 1161, 1362, 1589 |
| DpnII | GATC | 7 cut(s) | 244, 350, 571, 932, 1159, 1360, 1587 |
| DraI | TTTAAA | 1 cut(s) | 804 |
| DraIII | CACNNNGTG | 1 cut(s) | 596 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 55 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 55 |
| EaeI | YGGCCR | 1 cut(s) | 100 |
| Eam1104I | CTCTTC | 6 cut(s) | 429, 615, 654, 849, 1095, 1444 |
| EarI | CTCTTC | 6 cut(s) | 429, 615, 654, 849, 1095, 1444 |
| EciI | GGCGGA | 2 cut(s) | 112, 258 |
| Eco130I | CCWWGG | 2 cut(s) | 168, 1128 |
| Eco24I | GRGCYC | 1 cut(s) | 424 |
| Eco47I | GGWCC | 5 cut(s) | 4, 18, 48, 114, 493 |
| Eco57I | CTGAAG | 3 cut(s) | 936, 1007, 1289 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 191 |
| EcoRII | CCWGG | 1 cut(s) | 1139 |
| EcoT14I | CCWWGG | 2 cut(s) | 168, 1128 |
| EcoT38I | GRGCYC | 1 cut(s) | 424 |
| ErhI | CCWWGG | 2 cut(s) | 168, 1128 |
| FaeI | CATG | 6 cut(s) | 629, 656, 940, 1466, 1526, 1541 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 732, 764 |
| FaqI | GGGAC | 1 cut(s) | 288 |
| FatI | CATG | 6 cut(s) | 625, 652, 936, 1462, 1522, 1537 |
| FauI | CCCGC | 1 cut(s) | 370 |
| FblI | GTMKAC | 2 cut(s) | 13, 33 |
| FokI | GGATG | 1 cut(s) | 1421 |
| FriOI | GRGCYC | 1 cut(s) | 424 |
| FspBI | CTAG | 1 cut(s) | 348 |
| GlaI | GCGC | 3 cut(s) | 111, 185, 1616 |
| GsuI | CTGGAG | 2 cut(s) | 63, 1227 |
| HaeII | RGCGCY | 1 cut(s) | 187 |
| HaeIII | GGCC | 3 cut(s) | 102, 203, 836 |
| HhaI | GCGC | 3 cut(s) | 112, 186, 1617 |
| Hin1II | CATG | 6 cut(s) | 629, 656, 940, 1466, 1526, 1541 |
| Hin6I | GCGC | 3 cut(s) | 110, 184, 1615 |
| HinP1I | GCGC | 3 cut(s) | 110, 184, 1615 |
| HincII | GTYRAC | 2 cut(s) | 14, 957 |
| HindII | GTYRAC | 2 cut(s) | 14, 957 |
| HphI | GGTGA | 2 cut(s) | 351, 1344 |
| Hpy166II | GTNNAC | 5 cut(s) | 14, 34, 957, 1520, 1641 |
| Hpy188I | TCNGA | 9 cut(s) | 156, 251, 375, 538, 776, 916, 987, 1342, 1405 |
| Hpy188III | TCNNGA | 9 cut(s) | 60, 289, 567, 638, 1163, 1187, 1267, 1394, 1576 |
| Hpy8I | GTNNAC | 5 cut(s) | 14, 34, 957, 1520, 1641 |
| Hpy99I | CGWCG | 5 cut(s) | 18, 230, 233, 236, 1314 |
| HpyAV | CCTTC | 9 cut(s) | 411, 719, 781, 938, 1205, 1246, 1264, 1345, 1553 |
| HpyCH4III | ACNGT | 6 cut(s) | 263, 302, 463, 505, 1034, 1645 |
| HpyCH4IV | ACGT | 2 cut(s) | 577, 1006 |
| HpyF3I | CTNAG | 9 cut(s) | 153, 180, 192, 379, 409, 1059, 1081, 1404, 1574 |
| HpySE526I | ACGT | 2 cut(s) | 577, 1006 |
| Hsp92II | CATG | 6 cut(s) | 629, 656, 940, 1466, 1526, 1541 |
| HspAI | GCGC | 3 cut(s) | 110, 184, 1615 |
| Kpn2I | TCCGGA | 1 cut(s) | 59 |
| Kzo9I | GATC | 7 cut(s) | 244, 350, 571, 932, 1159, 1360, 1587 |
| LguI | GCTCTTC | 3 cut(s) | 429, 615, 1444 |
| LmnI | GCTCC | 6 cut(s) | 68, 271, 651, 905, 1090, 1255 |
| Lsp1109I | GCAGC | 8 cut(s) | 160, 163, 443, 700, 754, 775, 893, 1009 |
| LweI | GCATC | 3 cut(s) | 401, 848, 1531 |
| MaeI | CTAG | 1 cut(s) | 348 |
| MaeII | ACGT | 2 cut(s) | 577, 1006 |
| MaeIII | GTNAC | 1 cut(s) | 1007 |
| MalI | GATC | 7 cut(s) | 246, 352, 573, 934, 1161, 1362, 1589 |
| MboI | GATC | 7 cut(s) | 244, 350, 571, 932, 1159, 1360, 1587 |
| MfeI | CAATTG | 2 cut(s) | 1380, 1623 |
| MhlI | GDGCHC | 3 cut(s) | 268, 424, 1596 |
| MlsI | TGGCCA | 1 cut(s) | 102 |
| MluCI | AATT | 4 cut(s) | 547, 1380, 1580, 1623 |
| MluNI | TGGCCA | 1 cut(s) | 102 |
| MlyI | GAGTC | 7 cut(s) | 19, 65, 934, 952, 1399, 1409, 1628 |
| MmeI | TCCRAC | 2 cut(s) | 162, 799 |
| Mox20I | TGGCCA | 1 cut(s) | 102 |
| MroI | TCCGGA | 1 cut(s) | 59 |
| MroXI | GAANNNNTTC | 2 cut(s) | 981, 1494 |
| MscI | TGGCCA | 1 cut(s) | 102 |
| MseI | TTAA | 8 cut(s) | 507, 752, 803, 900, 921, 1202, 1419, 1509 |
| Msp20I | TGGCCA | 1 cut(s) | 102 |
| MspA1I | CMGCKG | 3 cut(s) | 129, 413, 490 |
| MspR9I | CCNGG | 4 cut(s) | 29, 306, 331, 1141 |
| MunI | CAATTG | 2 cut(s) | 1380, 1623 |
| Mva1269I | GAATGC | 1 cut(s) | 298 |
| MvaI | CCWGG | 1 cut(s) | 1141 |
| MvnI | CGCG | 4 cut(s) | 110, 112, 365, 1615 |
| NciI | CCSGG | 3 cut(s) | 29, 306, 331 |
| NdeII | GATC | 7 cut(s) | 244, 350, 571, 932, 1159, 1360, 1587 |
| NlaIII | CATG | 6 cut(s) | 629, 656, 940, 1466, 1526, 1541 |
| NlaIV | GGNNCC | 4 cut(s) | 70, 324, 447, 495 |
| NmeAIII | GCCGAG | 1 cut(s) | 1306 |
| NspI | RCATGY | 1 cut(s) | 1526 |
| PciSI | GCTCTTC | 3 cut(s) | 429, 615, 1444 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 231, 240 |
| PctI | GAATGC | 1 cut(s) | 298 |
| PdmI | GAANNNNTTC | 2 cut(s) | 981, 1494 |
| PfeI | GAWTC | 7 cut(s) | 132, 252, 528, 563, 911, 1136, 1610 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 818 |
| PfoI | TCCNGGA | 1 cut(s) | 329 |
| PleI | GAGTC | 7 cut(s) | 18, 64, 934, 952, 1398, 1408, 1628 |
| PpsI | GAGTC | 7 cut(s) | 18, 64, 934, 952, 1398, 1408, 1628 |
| Ppu21I | YACGTR | 1 cut(s) | 1007 |
| PshAI | GACNNNNGTC | 2 cut(s) | 9, 1389 |
| PsiI | TTATAA | 1 cut(s) | 552 |
| Psp6I | CCWGG | 1 cut(s) | 1139 |
| PspGI | CCWGG | 1 cut(s) | 1139 |
| PspN4I | GGNNCC | 4 cut(s) | 70, 324, 447, 495 |
| PspPI | GGNCC | 5 cut(s) | 4, 18, 48, 114, 493 |
| PvuII | CAGCTG | 1 cut(s) | 413 |
| RsaI | GTAC | 3 cut(s) | 260, 1064, 1461 |
| RsaNI | GTAC | 3 cut(s) | 259, 1063, 1460 |
| Rsr2I | CGGWCCG | 1 cut(s) | 18 |
| RsrII | CGGWCCG | 1 cut(s) | 18 |
| SalI | GTCGAC | 1 cut(s) | 12 |
| SapI | GCTCTTC | 3 cut(s) | 429, 615, 1444 |
| SaqAI | TTAA | 8 cut(s) | 507, 752, 803, 900, 921, 1202, 1419, 1509 |
| Sau3AI | GATC | 7 cut(s) | 244, 350, 571, 932, 1159, 1360, 1587 |
| Sau96I | GGNCC | 5 cut(s) | 4, 18, 48, 114, 493 |
| SchI | GAGTC | 7 cut(s) | 19, 65, 934, 952, 1399, 1409, 1628 |
| ScrFI | CCNGG | 4 cut(s) | 29, 306, 331, 1141 |
| SduI | GDGCHC | 3 cut(s) | 268, 424, 1596 |
| SfaNI | GCATC | 3 cut(s) | 401, 848, 1531 |
| SinI | GGWCC | 5 cut(s) | 4, 18, 48, 114, 493 |
| SmlI | CTYRAG | 1 cut(s) | 1387 |
| SmoI | CTYRAG | 1 cut(s) | 1387 |
| Sse9I | AATT | 4 cut(s) | 547, 1380, 1580, 1623 |
| SspI | AATATT | 1 cut(s) | 1285 |
| SspMI | CTAG | 1 cut(s) | 348 |
| StyD4I | CCNGG | 4 cut(s) | 27, 304, 329, 1139 |
| StyI | CCWWGG | 2 cut(s) | 168, 1128 |
| TaaI | ACNGT | 6 cut(s) | 263, 302, 463, 505, 1034, 1645 |
| TaiI | ACGT | 2 cut(s) | 580, 1009 |
| TaqI | TCGA | 5 cut(s) | 13, 454, 606, 931, 1590 |
| TaqII | GACCGA | 1 cut(s) | 35 |
| TasI | AATT | 4 cut(s) | 547, 1380, 1580, 1623 |
| TatI | WGTACW | 1 cut(s) | 1459 |
| TauI | GCSGC | 2 cut(s) | 167, 839 |
| TfiI | GAWTC | 7 cut(s) | 132, 252, 528, 563, 911, 1136, 1610 |
| Tru1I | TTAA | 8 cut(s) | 507, 752, 803, 900, 921, 1202, 1419, 1509 |
| Tru9I | TTAA | 8 cut(s) | 507, 752, 803, 900, 921, 1202, 1419, 1509 |
| TscAI | CASTG | 4 cut(s) | 268, 468, 597, 1522 |
| TseI | GCWGC | 8 cut(s) | 173, 176, 431, 713, 767, 788, 881, 1022 |
| TspDTI | ATGAA | 5 cut(s) | 615, 642, 669, 905, 1361 |
| TspGWI | ACGGA | 2 cut(s) | 31, 315 |
| TspRI | CASTG | 4 cut(s) | 268, 468, 597, 1522 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 818 |
| VpaK11BI | GGWCC | 5 cut(s) | 4, 18, 48, 114, 493 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 191 |
| XceI | RCATGY | 1 cut(s) | 1526 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1648 |
| XmiI | GTMKAC | 2 cut(s) | 13, 33 |
| XmnI | GAANNNNTTC | 2 cut(s) | 981, 1494 |
| XspI | CTAG | 1 cut(s) | 348 |