Ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0205481 |
| rosa_multiflora | Rmu_co8129578.1_g000001 Rmu_sc0002769.1_g000011 Rmu_sc0004080.1_g000010 Rmu_sc0010099.1_g000004 |
| rosa_samantha | Rh5DG183700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 120 |
| AdeI | CACNNNGTG | 1 cut(s) | 58 |
| AfaI | GTAC | 2 cut(s) | 5, 51 |
| AgsI | TTSAA | 2 cut(s) | 252, 268 |
| AjnI | CCWGG | 2 cut(s) | 151, 169 |
| AluBI | AGCT | 1 cut(s) | 149 |
| AluI | AGCT | 1 cut(s) | 149 |
| AoxI | GGCC | 1 cut(s) | 117 |
| AspLEI | GCGC | 1 cut(s) | 142 |
| AspS9I | GGNCC | 2 cut(s) | 117, 155 |
| AsuC2I | CCSGG | 1 cut(s) | 56 |
| AsuHPI | GGTGA | 1 cut(s) | 91 |
| AvaII | GGWCC | 1 cut(s) | 155 |
| BbvCI | CCTCAGC | 1 cut(s) | 309 |
| BccI | CCATC | 1 cut(s) | 155 |
| BciT130I | CCWGG | 2 cut(s) | 153, 171 |
| BcnI | CCSGG | 1 cut(s) | 56 |
| BisI | GCNGC | 1 cut(s) | 120 |
| BlsI | GCNGC | 1 cut(s) | 121 |
| Bme1390I | CCNGG | 3 cut(s) | 56, 153, 171 |
| Bme18I | GGWCC | 1 cut(s) | 155 |
| BmgT120I | GGNCC | 2 cut(s) | 117, 155 |
| BmiI | GGNNCC | 1 cut(s) | 157 |
| BmrFI | CCNGG | 3 cut(s) | 56, 153, 171 |
| Bpu10I | CCTNAGC | 1 cut(s) | 309 |
| BpuMI | CCSGG | 1 cut(s) | 56 |
| BsaJI | CCNNGG | 1 cut(s) | 102 |
| Bse3DI | GCAATG | 2 cut(s) | 279, 333 |
| BseBI | CCWGG | 2 cut(s) | 153, 171 |
| BseDI | CCNNGG | 1 cut(s) | 102 |
| BseGI | GGATG | 1 cut(s) | 112 |
| BseMI | GCAATG | 2 cut(s) | 279, 333 |
| BseMII | CTCAG | 1 cut(s) | 323 |
| BshFI | GGCC | 1 cut(s) | 119 |
| BsiSI | CCGG | 1 cut(s) | 56 |
| BslFI | GGGAC | 2 cut(s) | 141, 315 |
| BsmFI | GGGAC | 2 cut(s) | 141, 315 |
| BsnI | GGCC | 1 cut(s) | 119 |
| Bsp1407I | TGTACA | 1 cut(s) | 49 |
| BspACI | CCGC | 1 cut(s) | 120 |
| BspANI | GGCC | 1 cut(s) | 119 |
| BspCNI | CTCAG | 1 cut(s) | 322 |
| BspLI | GGNNCC | 1 cut(s) | 157 |
| BsrDI | GCAATG | 2 cut(s) | 279, 333 |
| BsrGI | TGTACA | 1 cut(s) | 49 |
| BssECI | CCNNGG | 1 cut(s) | 102 |
| BssT1I | CCWWGG | 1 cut(s) | 102 |
| Bst2UI | CCWGG | 2 cut(s) | 153, 171 |
| Bst4CI | ACNGT | 1 cut(s) | 37 |
| BstAUI | TGTACA | 1 cut(s) | 49 |
| BstC8I | GCNNGC | 2 cut(s) | 90, 315 |
| BstDEI | CTNAG | 1 cut(s) | 309 |
| BstF5I | GGATG | 1 cut(s) | 112 |
| BstHHI | GCGC | 1 cut(s) | 142 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 89, 146, 171 |
| BstNI | CCWGG | 2 cut(s) | 153, 171 |
| BstSCI | CCNGG | 3 cut(s) | 54, 151, 169 |
| BsuRI | GGCC | 1 cut(s) | 119 |
| BtsCI | GGATG | 1 cut(s) | 112 |
| Cac8I | GCNNGC | 2 cut(s) | 90, 315 |
| CfoI | GCGC | 1 cut(s) | 142 |
| Cfr13I | GGNCC | 2 cut(s) | 117, 155 |
| Csp6I | GTAC | 2 cut(s) | 4, 50 |
| CviJI | RGCY | 4 cut(s) | 119, 149, 165, 317 |
| CviKI_1 | RGCY | 4 cut(s) | 119, 149, 165, 317 |
| CviQI | GTAC | 2 cut(s) | 4, 50 |
| DdeI | CTNAG | 1 cut(s) | 309 |
| DraI | TTTAAA | 1 cut(s) | 259 |
| DraIII | CACNNNGTG | 1 cut(s) | 58 |
| Eco130I | CCWWGG | 1 cut(s) | 102 |
| Eco47I | GGWCC | 1 cut(s) | 155 |
| EcoRII | CCWGG | 2 cut(s) | 151, 169 |
| EcoT14I | CCWWGG | 1 cut(s) | 102 |
| ErhI | CCWWGG | 1 cut(s) | 102 |
| FaiI | YATR | 3 cut(s) | 27, 29, 134 |
| FaqI | GGGAC | 2 cut(s) | 141, 315 |
| FauNDI | CATATG | 1 cut(s) | 27 |
| Fnu4HI | GCNGC | 1 cut(s) | 120 |
| FokI | GGATG | 1 cut(s) | 119 |
| Fsp4HI | GCNGC | 1 cut(s) | 120 |
| GlaI | GCGC | 1 cut(s) | 141 |
| GluI | GCNGC | 1 cut(s) | 120 |
| HaeIII | GGCC | 1 cut(s) | 119 |
| HapII | CCGG | 1 cut(s) | 56 |
| HhaI | GCGC | 1 cut(s) | 142 |
| Hin6I | GCGC | 1 cut(s) | 140 |
| HinP1I | GCGC | 1 cut(s) | 140 |
| HinfI | GANTC | 2 cut(s) | 8, 289 |
| HpaII | CCGG | 1 cut(s) | 56 |
| HphI | GGTGA | 1 cut(s) | 91 |
| Hpy166II | GTNNAC | 1 cut(s) | 52 |
| Hpy188I | TCNGA | 2 cut(s) | 70, 344 |
| Hpy188III | TCNNGA | 2 cut(s) | 41, 158 |
| Hpy8I | GTNNAC | 1 cut(s) | 52 |
| HpyAV | CCTTC | 1 cut(s) | 286 |
| HpyCH4III | ACNGT | 1 cut(s) | 37 |
| HpyCH4V | TGCA | 1 cut(s) | 31 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 89, 146, 171 |
| HpyF3I | CTNAG | 1 cut(s) | 309 |
| HspAI | GCGC | 1 cut(s) | 140 |
| LmnI | GCTCC | 1 cut(s) | 154 |
| LpnPI | CCDG | 6 cut(s) | 26, 69, 138, 156, 165, 183 |
| MaeIII | GTNAC | 1 cut(s) | 61 |
| MluCI | AATT | 1 cut(s) | 263 |
| MmeI | TCCRAC | 1 cut(s) | 41 |
| MnlI | CCTC | 3 cut(s) | 103, 214, 318 |
| MseI | TTAA | 1 cut(s) | 258 |
| MspI | CCGG | 1 cut(s) | 56 |
| MspR9I | CCNGG | 3 cut(s) | 56, 153, 171 |
| MvaI | CCWGG | 2 cut(s) | 153, 171 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 89, 146, 171 |
| NciI | CCSGG | 1 cut(s) | 56 |
| NdeI | CATATG | 1 cut(s) | 27 |
| NlaIV | GGNNCC | 1 cut(s) | 157 |
| PfeI | GAWTC | 2 cut(s) | 8, 289 |
| PkrI | GCNGC | 1 cut(s) | 121 |
| Psp6I | CCWGG | 2 cut(s) | 151, 169 |
| PspGI | CCWGG | 2 cut(s) | 151, 169 |
| PspN4I | GGNNCC | 1 cut(s) | 157 |
| PspPI | GGNCC | 2 cut(s) | 117, 155 |
| RsaI | GTAC | 2 cut(s) | 5, 51 |
| RsaNI | GTAC | 2 cut(s) | 4, 50 |
| SaqAI | TTAA | 1 cut(s) | 258 |
| SatI | GCNGC | 1 cut(s) | 120 |
| Sau96I | GGNCC | 2 cut(s) | 117, 155 |
| ScrFI | CCNGG | 3 cut(s) | 56, 153, 171 |
| SetI | ASST | 5 cut(s) | 104, 114, 151, 278, 300 |
| SinI | GGWCC | 1 cut(s) | 155 |
| Sse9I | AATT | 1 cut(s) | 263 |
| SsiI | CCGC | 1 cut(s) | 120 |
| StyD4I | CCNGG | 3 cut(s) | 54, 151, 169 |
| StyI | CCWWGG | 1 cut(s) | 102 |
| TaaI | ACNGT | 1 cut(s) | 37 |
| TasI | AATT | 1 cut(s) | 263 |
| TatI | WGTACW | 1 cut(s) | 49 |
| TauI | GCSGC | 1 cut(s) | 122 |
| TfiI | GAWTC | 2 cut(s) | 8, 289 |
| Tru1I | TTAA | 1 cut(s) | 258 |
| Tru9I | TTAA | 1 cut(s) | 258 |
| TspDTI | ATGAA | 2 cut(s) | 89, 268 |
| VpaK11BI | GGWCC | 1 cut(s) | 155 |