Rmu_sc0012098.1_g000004

Rho (Ras homology) subfamily of Ras-like small GTPases

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012098.1
OG0011005
Physical Location & Seq
Forward (+)
17462 .. 20446
2985 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012098.1_g000004.1.cds

Sequence Viewer

Length: 2028 bp
atgggttgttgttactcgaaaatcgagagacaagaaatggtgtcgagatgtaaatcgagaaagaggtgctgctctgctccaattttcaaatgccgaaactaccctccaccaccagcaccacccaacccaacaccagtcccaccacctcaacgaccacacccaccactcgccgccgccgcctcaaaccccacagactccgcttcaaccgcctccgcctcctccgcggagcccaagctccgagaccacgtggacctccacagcctccaccgccatgccgccgcctccgcctccgccgccgccgccgtcgtccacgtgggatttctgggacccttttgtgccggcttcgtctcggtcggtgaccgaggaagaatgggaggccctccgcctcctccgcggagcccaagctccgagaccacgtggacctccacagcctccaccgccatgccgccgcctccgcctccgccgccgtcgtccacgtgggatttctgggacccttttgtgccggcttcgtctcggtcggtgaccgaggaagaatgggaggctacgaccacctcgtcggaggcggtggttacgactgtcaccggggcggcgagcaccgtggcgccgccttcggttgttagtgggttttcgaaggacagtgaggctagctcgatggcaatggtggtgtccaggaatgctaaggatctggtggagatcattaaggagcttgatgagtattttcttaaagctgccgatgccggtggccatctctcgtttctcttggaagttcccactcctggattttcttctcagattaaaggaggtaaagtatataaccatggttgtaatttgagtactccatctacatggacatggggttcgagtcctaaactcaatggtttcgggaaaatgggttgtgacgaaatggtgttaagtcatttaggcggcgaaattgggactgatggtgtggtacatagcagccattgttctactgtggagaggctctatgcttgggaaaagaaactattccaggaggtcaaggaggcagagacaataaagacagagcatgagaagagagtgtcaacattgaagaagttagagatgaagagggcagcagactatgtgaagactgagaagaccaagaaagaggtggaaaggttggagtcacaaatgatggtttcttctcaggccattgagacaacttctgctgagatcatcaagataagggacacagagttgtaccctcaactacttgagcttgtcaaaggattgatgtgtatgtggagaaccatgtatgagtgccaccaagtccagaagcatatagttcagcaactcaaataccttaacaccataccatctactgagcccacgtctgagattcacaggcaatcaactctccagctcgaggttcatgtccagcaatggcaccagtccttttgcaacctggtcagggctcaatgtgactatatccagtcccttacaggatggctccggcttagtctcttccagtttaggagaaatcctttaccaagaacaagtcaagaatcaagaatttacacgttctgtgaagaatggcaccatgcagttgatcggatcccagacaaagtagcatctgaaggaatcaagagctttttaactgtagtgcatgccattgtagttcaacaagccgaagaaaacaagcaaaaaaagaagtcagaatctgcgtttaaagagctcgagaggaagtcaagtcaacttaggtcacttgagtccaaacatggccctttctcaatgctagattcctctagctctactgcaaagaacccagtcgctgataagcgagcaaaggtggagaactcgagagtaaaagcagaagaggagaagagcaagcatgaaaagtttgtgagcgtgacaagatccatgaccataaataacttgcagatggggtttccacatgtgtttgagtcgatggtaggcttttcaagtgtgtgtatgcaggcgttcgagtcattatacaaccaagccaaaagcgttgatcaggagctggatgttaagaggctgctaaattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF630 DUF632 Ras

Protein Analysis

675

Amino Acids

74.87

Weight (kDa)

8.34

Isoelectric Point (pI)

52.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011005)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G51290 AT3G51290 AT3G51290
fragaria_vesca FvH4_1g11480 FvH4_1g11480
malus_domestica MD15G1242800.v1.1
prunus_persica Prupe.7G171300_v2.0.a1 Prupe.7G171300_v2.0.a1
pyrus_communis pycom02g09980 pycom15g21400
rosa_chinensis RchiOBHm_Chr2g0099091
rosa_laevigata RLG00000016847
rosa_multiflora Rmu_sc0012098.1_g000004
rosa_roxburghii Rroxscaffold_2G00143450
rosa_rugosa Rorug02G0076600
rosa_samantha Rh2AG125700 Rh2BG129000 Rh2CG130000 Rh2DG130400
rosa_wichuraiana Rw2G009680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 553
AccB1I GGYRCC 3 cut(s) 601, 1404, 1554
AccII CGCG 2 cut(s) 224, 394
AclWI GGATC 4 cut(s) 690, 1567, 1580, 1869
AcoI YGGCCR 1 cut(s) 742
AcsI RAATTY 1 cut(s) 1530
AcuI CTGAAG 1 cut(s) 1614
AcvI CACGTG 4 cut(s) 247, 313, 417, 477
AcyI GRCGYC 1 cut(s) 602
AfaI GTAC 3 cut(s) 835, 951, 1220
AfiI CCNNNNNNNGG 3 cut(s) 776, 1384, 1429
AflIII ACRYGT 2 cut(s) 1536, 1912
AgsI TTSAA 5 cut(s) 88, 204, 1069, 1640, 1941
AjiI CACGTC 1 cut(s) 1350
AjnI CCWGG 4 cut(s) 668, 775, 1008, 1422
AloI GAACNNNNNNTCC 2 cut(s) 841, 873
Alw21I GWGCWC 2 cut(s) 596, 1695
Alw26I GTCTC 8 cut(s) 22, 234, 352, 404, 516, 1022, 1169, 1484
AlwI GGATC 4 cut(s) 690, 1567, 1580, 1869
AlwNI CAGNNNCTG 3 cut(s) 1679, 1790, 2002
Ama87I CYCGRG 3 cut(s) 1382, 1694, 1816
AoxI GGCC 4 cut(s) 376, 742, 1167, 1738
ApeKI GCWGC 5 cut(s) 69, 728, 957, 1091, 2017
ApoI RAATTY 1 cut(s) 1530
ArsI GACNNNNNNTTYG 2 cut(s) 841, 873
Asp700I GAANNNNTTC 1 cut(s) 1004
AspLEI GCGC 1 cut(s) 604
AspS9I GGNCC 6 cut(s) 250, 326, 377, 420, 490, 1739
AsuC2I CCSGG 1 cut(s) 583
AsuHPI GGTGA 3 cut(s) 368, 532, 571
AsuII TTCGAA 1 cut(s) 629
AsuNHI GCTAGC 1 cut(s) 644
AvaI CYCGRG 3 cut(s) 1382, 1694, 1816
AvaII GGWCC 4 cut(s) 250, 326, 420, 490
BalI TGGCCA 1 cut(s) 744
BamHI GGATCC 1 cut(s) 1572
BanI GGYRCC 3 cut(s) 601, 1404, 1554
BanII GRGCYC 5 cut(s) 231, 401, 1347, 1435, 1695
BbrPI CACGTG 4 cut(s) 247, 313, 417, 477
BbsI GAAGAC 2 cut(s) 1112, 1121
Bbv12I GWGCWC 2 cut(s) 596, 1695
BbvI GCAGC 5 cut(s) 56, 715, 969, 1103, 2004
BccI CCATC 9 cut(s) 646, 753, 847, 935, 1147, 1342, 1458, 1894, 1921
BceAI ACGGC 2 cut(s) 287, 451
BciT130I CCWGG 4 cut(s) 670, 777, 1010, 1424
BclI TGATCA 1 cut(s) 1993
BcnI CCSGG 1 cut(s) 583
BcoDI GTCTC 8 cut(s) 22, 234, 352, 404, 516, 1022, 1169, 1484
BfaI CTAG 3 cut(s) 645, 1754, 1764
BfmI CTRYAG 1 cut(s) 1617
BfoI RGCGCY 1 cut(s) 605
BmcAI AGTACT 1 cut(s) 835
Bme1390I CCNGG 5 cut(s) 583, 670, 777, 1010, 1424
Bme18I GGWCC 4 cut(s) 250, 326, 420, 490
BmeT110I CYCGRG 3 cut(s) 1382, 1694, 1816
BmgBI CACGTC 1 cut(s) 1350
BmgT120I GGNCC 6 cut(s) 250, 326, 377, 420, 490, 1739
BmrFI CCNGG 5 cut(s) 583, 670, 777, 1010, 1424
BmrI ACTGGG 1 cut(s) 1778
BmsI GCATC 2 cut(s) 724, 1598
BmtI GCTAGC 1 cut(s) 648
BmuI ACTGGG 1 cut(s) 1778
BpiI GAAGAC 2 cut(s) 1112, 1121
BplI GAGNNNNNCTC 2 cut(s) 632, 664
BpmI CTGGAG 1 cut(s) 1361
Bpu10I CCTNAGC 1 cut(s) 678
Bpu14I TTCGAA 1 cut(s) 629
BpuEI CTTGAG 2 cut(s) 1253, 1745
BpuMI CCSGG 1 cut(s) 583
BsaAI YACGTR 4 cut(s) 247, 313, 417, 477
BsaBI GATNNNNATC 1 cut(s) 52
BsaHI GRCGYC 1 cut(s) 602
BsaI GGTCTC 2 cut(s) 234, 404
BsaJI CCNNGG 7 cut(s) 222, 361, 392, 525, 582, 597, 817
BsaXI ACNNNNNCTCC 2 cut(s) 792, 822
Bsc4I CCNNNNNNNGG 3 cut(s) 776, 1384, 1429
Bse118I RCCGGY 3 cut(s) 338, 502, 737
Bse1I ACTGG 5 cut(s) 134, 1408, 1450, 1486, 1784
Bse3DI GCAATG 2 cut(s) 663, 1406
Bse8I GATNNNNATC 1 cut(s) 52
BseBI CCWGG 4 cut(s) 670, 777, 1010, 1424
BseDI CCNNGG 7 cut(s) 222, 361, 392, 525, 582, 597, 817
BseGI GGATG 2 cut(s) 1469, 2011
BseJI GATNNNNATC 1 cut(s) 52
BseLI CCNNNNNNNGG 3 cut(s) 776, 1384, 1429
BseMI GCAATG 2 cut(s) 663, 1406
BseMII CTCAG 6 cut(s) 803, 1101, 1178, 1179, 1332, 1344
BseNI ACTGG 5 cut(s) 134, 1408, 1450, 1486, 1784
BseRI GAGGAG 3 cut(s) 208, 378, 1850
BseXI GCAGC 5 cut(s) 56, 715, 969, 1103, 2004
Bsh1236I CGCG 2 cut(s) 224, 394
Bsh1285I CGRYCG 2 cut(s) 354, 518
BshFI GGCC 4 cut(s) 378, 744, 1169, 1740
BshNI GGYRCC 3 cut(s) 601, 1404, 1554
BsiEI CGRYCG 2 cut(s) 354, 518
BsiHKAI GWGCWC 2 cut(s) 596, 1695
BsiHKCI CYCGRG 3 cut(s) 1382, 1694, 1816
BsiSI CCGG 5 cut(s) 339, 503, 582, 738, 1471
BslFI GGGAC 6 cut(s) 122, 339, 503, 949, 1220, 1438
BslI CCNNNNNNNGG 3 cut(s) 776, 1384, 1429
BsmAI GTCTC 8 cut(s) 22, 234, 352, 404, 516, 1022, 1169, 1484
BsmBI CGTCTC 2 cut(s) 352, 516
BsmFI GGGAC 6 cut(s) 122, 339, 503, 949, 1220, 1438
BsmI GAATGC 1 cut(s) 679
BsnI GGCC 4 cut(s) 378, 744, 1169, 1740
Bso31I GGTCTC 2 cut(s) 234, 404
BsoBI CYCGRG 3 cut(s) 1382, 1694, 1816
Bsp119I TTCGAA 1 cut(s) 629
Bsp1286I GDGCHC 6 cut(s) 231, 401, 596, 1347, 1435, 1695
Bsp143I GATC 7 cut(s) 682, 693, 1191, 1567, 1572, 1874, 1993
Bsp19I CCATGG 1 cut(s) 817
BspANI GGCC 4 cut(s) 378, 744, 1169, 1740
BspCNI CTCAG 6 cut(s) 802, 1102, 1177, 1180, 1333, 1345
BspFNI CGCG 2 cut(s) 224, 394
BspOI GCTAGC 1 cut(s) 648
BspPI GGATC 4 cut(s) 690, 1567, 1580, 1869
BspQI GCTCTTC 1 cut(s) 1835
BspT104I TTCGAA 1 cut(s) 629
BspT107I GGYRCC 3 cut(s) 601, 1404, 1554
BspTNI GGTCTC 2 cut(s) 234, 404
BsrDI GCAATG 2 cut(s) 663, 1406
BsrFI RCCGGY 3 cut(s) 338, 502, 737
BsrI ACTGG 5 cut(s) 134, 1408, 1450, 1486, 1784
BssAI RCCGGY 3 cut(s) 338, 502, 737
BssECI CCNNGG 7 cut(s) 222, 361, 392, 525, 582, 597, 817
BssMI GATC 7 cut(s) 682, 693, 1191, 1567, 1572, 1874, 1993
BssNI GRCGYC 1 cut(s) 602
BssT1I CCWWGG 1 cut(s) 817
Bst2UI CCWGG 4 cut(s) 670, 777, 1010, 1424
Bst4CI ACNGT 5 cut(s) 577, 598, 638, 973, 1618
Bst6I CTCTTC 5 cut(s) 1046, 1079, 1487, 1827, 1835
BstACI GRCGYC 1 cut(s) 602
BstBAI YACGTR 4 cut(s) 247, 313, 417, 477
BstBI TTCGAA 1 cut(s) 629
BstC8I GCNNGC 8 cut(s) 340, 504, 592, 646, 1626, 1800, 1847, 1956
BstDEI CTNAG 9 cut(s) 678, 789, 1110, 1164, 1188, 1341, 1353, 1475, 1715
BstDSI CCRYGG 4 cut(s) 222, 392, 597, 817
BstEII GGTNACC 2 cut(s) 356, 520
BstF5I GGATG 2 cut(s) 1469, 2011
BstFNI CGCG 2 cut(s) 224, 394
BstH2I RGCGCY 1 cut(s) 605
BstHHI GCGC 1 cut(s) 604
BstKTI GATC 7 cut(s) 685, 696, 1194, 1570, 1575, 1877, 1996
BstMAI GTCTC 8 cut(s) 22, 234, 352, 404, 516, 1022, 1169, 1484
BstMBI GATC 7 cut(s) 682, 693, 1191, 1567, 1572, 1874, 1993
BstMCI CGRYCG 2 cut(s) 354, 518
BstNI CCWGG 4 cut(s) 670, 777, 1010, 1424
BstNSI RCATGY 2 cut(s) 1628, 1916
BstPI GGTNACC 2 cut(s) 356, 520
BstSCI CCNGG 5 cut(s) 581, 668, 775, 1008, 1422
BstSFI CTRYAG 1 cut(s) 1617
BstUI CGCG 2 cut(s) 224, 394
BstV1I GCAGC 5 cut(s) 56, 715, 969, 1103, 2004
BstV2I GAAGAC 2 cut(s) 1112, 1121
BstX2I RGATCY 3 cut(s) 682, 1572, 1874
BstXI CCANNNNNNTGG 1 cut(s) 846
BstYI RGATCY 3 cut(s) 682, 1572, 1874
BsuRI GGCC 4 cut(s) 378, 744, 1169, 1740
BtgI CCRYGG 4 cut(s) 222, 392, 597, 817
BtrI CACGTC 1 cut(s) 1350
BtsCI GGATG 2 cut(s) 1469, 2011
BtsIMutI CAGTG 1 cut(s) 643
Cac8I GCNNGC 8 cut(s) 340, 504, 592, 646, 1626, 1800, 1847, 1956
CaiI CAGNNNCTG 3 cut(s) 1679, 1790, 2002
CfoI GCGC 1 cut(s) 604
Cfr10I RCCGGY 3 cut(s) 338, 502, 737
Cfr13I GGNCC 6 cut(s) 250, 326, 377, 420, 490, 1739
Cfr42I CCGCGG 2 cut(s) 225, 395
CsiI ACCWGGT 1 cut(s) 1422
Csp6I GTAC 3 cut(s) 834, 950, 1219
CviQI GTAC 3 cut(s) 834, 950, 1219
DdeI CTNAG 9 cut(s) 678, 789, 1110, 1164, 1188, 1341, 1353, 1475, 1715
DinI GGCGCC 1 cut(s) 603
DpnI GATC 7 cut(s) 684, 695, 1193, 1569, 1574, 1876, 1995
DpnII GATC 7 cut(s) 682, 693, 1191, 1567, 1572, 1874, 1993
DraI TTTAAA 1 cut(s) 1687
DrdI GACNNNNNNGTC 1 cut(s) 553
DseDI GACNNNNNNGTC 1 cut(s) 553
EaeI YGGCCR 1 cut(s) 742
Eam1104I CTCTTC 5 cut(s) 1046, 1079, 1487, 1827, 1835
EarI CTCTTC 5 cut(s) 1046, 1079, 1487, 1827, 1835
EciI GGCGGA 6 cut(s) 202, 274, 280, 372, 444, 450
Ecl136II GAGCTC 1 cut(s) 1693
Eco130I CCWWGG 1 cut(s) 817
Eco24I GRGCYC 5 cut(s) 231, 401, 1347, 1435, 1695
Eco31I GGTCTC 2 cut(s) 234, 404
Eco47I GGWCC 4 cut(s) 250, 326, 420, 490
Eco53kI GAGCTC 1 cut(s) 1693
Eco57I CTGAAG 1 cut(s) 1614
Eco72I CACGTG 4 cut(s) 247, 313, 417, 477
Eco88I CYCGRG 3 cut(s) 1382, 1694, 1816
Eco91I GGTNACC 2 cut(s) 356, 520
EcoICRI GAGCTC 1 cut(s) 1693
EcoO109I RGGNCCY 3 cut(s) 326, 377, 490
EcoO65I GGTNACC 2 cut(s) 356, 520
EcoRII CCWGG 4 cut(s) 668, 775, 1008, 1422
EcoT14I CCWWGG 1 cut(s) 817
EcoT38I GRGCYC 5 cut(s) 231, 401, 1347, 1435, 1695
EgeI GGCGCC 1 cut(s) 603
EheI GGCGCC 1 cut(s) 603
ErhI CCWWGG 1 cut(s) 817
Esp3I CGTCTC 2 cut(s) 352, 516
FaqI GGGAC 6 cut(s) 122, 339, 503, 949, 1220, 1438
FbaI TGATCA 1 cut(s) 1993
FokI GGATG 2 cut(s) 1476, 2018
FriOI GRGCYC 5 cut(s) 231, 401, 1347, 1435, 1695
FspBI CTAG 3 cut(s) 645, 1754, 1764
GlaI GCGC 1 cut(s) 603
GsuI CTGGAG 1 cut(s) 1361
HaeII RGCGCY 1 cut(s) 605
HaeIII GGCC 4 cut(s) 378, 744, 1169, 1740
HapII CCGG 5 cut(s) 339, 503, 582, 738, 1471
HhaI GCGC 1 cut(s) 604
Hin1I GRCGYC 1 cut(s) 602
Hin6I GCGC 1 cut(s) 602
HinP1I GCGC 1 cut(s) 602
HincII GTYRAC 2 cut(s) 1062, 1712
HindII GTYRAC 2 cut(s) 1062, 1712
HpaII CCGG 5 cut(s) 339, 503, 582, 738, 1471
HphI GGTGA 3 cut(s) 368, 532, 571
Hpy166II GTNNAC 6 cut(s) 250, 310, 420, 474, 1062, 1712
Hpy188I TCNGA 8 cut(s) 239, 409, 559, 792, 1354, 1572, 1594, 1675
Hpy8I GTNNAC 6 cut(s) 250, 310, 420, 474, 1062, 1712
Hpy99I CGWCG 3 cut(s) 308, 472, 559
HpyAV CCTTC 3 cut(s) 618, 625, 1589
HpyCH4III ACNGT 5 cut(s) 577, 598, 638, 973, 1618
HpyCH4IV ACGT 6 cut(s) 246, 312, 416, 476, 1349, 1538
HpyCH4V TGCA 6 cut(s) 1419, 1562, 1624, 1775, 1897, 1954
HpyF3I CTNAG 9 cut(s) 678, 789, 1110, 1164, 1188, 1341, 1353, 1475, 1715
HpySE526I ACGT 6 cut(s) 246, 312, 416, 476, 1349, 1538
Hsp92I GRCGYC 1 cut(s) 602
HspAI GCGC 1 cut(s) 602
KasI GGCGCC 1 cut(s) 601
KflI GGGWCCC 2 cut(s) 326, 490
KroI GCCGGC 2 cut(s) 338, 502
KroNI GCCGGC 2 cut(s) 340, 504
Ksp22I TGATCA 1 cut(s) 1993
KspI CCGCGG 2 cut(s) 225, 395
Kzo9I GATC 7 cut(s) 682, 693, 1191, 1567, 1572, 1874, 1993
LguI GCTCTTC 1 cut(s) 1835
LmnI GCTCC 8 cut(s) 82, 226, 240, 396, 410, 703, 1473, 1999
Lsp1109I GCAGC 5 cut(s) 56, 715, 969, 1103, 2004
LweI GCATC 2 cut(s) 724, 1598
MabI ACCWGGT 1 cut(s) 1422
MaeI CTAG 3 cut(s) 645, 1754, 1764
MaeII ACGT 6 cut(s) 246, 312, 416, 476, 1349, 1538
MalI GATC 7 cut(s) 684, 695, 1193, 1569, 1574, 1876, 1995
MboI GATC 7 cut(s) 682, 693, 1191, 1567, 1572, 1874, 1993
MflI RGATCY 3 cut(s) 682, 1572, 1874
MhlI GDGCHC 6 cut(s) 231, 401, 596, 1347, 1435, 1695
MlsI TGGCCA 1 cut(s) 744
MluCI AATT 5 cut(s) 81, 826, 930, 1530, 2023
MluNI TGGCCA 1 cut(s) 744
Mly113I GGCGCC 1 cut(s) 602
MlyI GAGTC 6 cut(s) 188, 871, 1151, 1736, 1931, 1973
MmeI TCCRAC 2 cut(s) 537, 1119
Mox20I TGGCCA 1 cut(s) 744
MroNI GCCGGC 2 cut(s) 338, 502
MroXI GAANNNNTTC 1 cut(s) 1004
MscI TGGCCA 1 cut(s) 744
MseI TTAA 9 cut(s) 699, 723, 795, 911, 1323, 1613, 1686, 2010, 2026
MslI CAYNNNNRTG 4 cut(s) 270, 440, 844, 850
Msp20I TGGCCA 1 cut(s) 744
MspA1I CMGCKG 2 cut(s) 224, 394
MspI CCGG 5 cut(s) 339, 503, 582, 738, 1471
MspR9I CCNGG 5 cut(s) 583, 670, 777, 1010, 1424
Mva1269I GAATGC 1 cut(s) 679
MvaI CCWGG 4 cut(s) 670, 777, 1010, 1424
MvnI CGCG 2 cut(s) 224, 394
NaeI GCCGGC 2 cut(s) 340, 504
NarI GGCGCC 1 cut(s) 602
NciI CCSGG 1 cut(s) 583
NcoI CCATGG 1 cut(s) 817
NdeII GATC 7 cut(s) 682, 693, 1191, 1567, 1572, 1874, 1993
NgoMIV GCCGGC 2 cut(s) 338, 502
NheI GCTAGC 1 cut(s) 644
NmuCI GTSAC 8 cut(s) 356, 520, 577, 896, 1143, 1439, 1719, 1867
NspI RCATGY 2 cut(s) 1628, 1916
NspV TTCGAA 1 cut(s) 629
PaeI GCATGC 1 cut(s) 1628
PaeR7I CTCGAG 3 cut(s) 1382, 1694, 1816
PciI ACATGT 1 cut(s) 1912
PciSI GCTCTTC 1 cut(s) 1835
PcsI WCGNNNNNNNCGW 1 cut(s) 551
PctI GAATGC 1 cut(s) 679
PdiI GCCGGC 2 cut(s) 340, 504
PdmI GAANNNNTTC 1 cut(s) 1004
PfeI GAWTC 5 cut(s) 1357, 1523, 1599, 1676, 1757
PfoI TCCNGGA 3 cut(s) 668, 775, 1008
PleI GAGTC 6 cut(s) 188, 870, 1150, 1735, 1930, 1972
PluTI GGCGCC 1 cut(s) 605
PmaCI CACGTG 4 cut(s) 247, 313, 417, 477
PmlI CACGTG 4 cut(s) 247, 313, 417, 477
PpsI GAGTC 6 cut(s) 188, 870, 1150, 1735, 1930, 1972
Ppu21I YACGTR 4 cut(s) 247, 313, 417, 477
PpuMI RGGWCCY 2 cut(s) 326, 490
PscI ACATGT 1 cut(s) 1912
Psp124BI GAGCTC 1 cut(s) 1695
Psp5II RGGWCCY 2 cut(s) 326, 490
Psp6I CCWGG 4 cut(s) 668, 775, 1008, 1422
PspCI CACGTG 4 cut(s) 247, 313, 417, 477
PspEI GGTNACC 2 cut(s) 356, 520
PspGI CCWGG 4 cut(s) 668, 775, 1008, 1422
PspPI GGNCC 6 cut(s) 250, 326, 377, 420, 490, 1739
PspPPI RGGWCCY 2 cut(s) 326, 490
PspXI VCTCGAGB 1 cut(s) 1382
PstNI CAGNNNCTG 3 cut(s) 1679, 1790, 2002
PsuI RGATCY 3 cut(s) 682, 1572, 1874
RsaI GTAC 3 cut(s) 835, 951, 1220
RsaNI GTAC 3 cut(s) 834, 950, 1219
RseI CAYNNNNRTG 4 cut(s) 270, 440, 844, 850
SacI GAGCTC 1 cut(s) 1695
SacII CCGCGG 2 cut(s) 225, 395
SapI GCTCTTC 1 cut(s) 1835
SaqAI TTAA 9 cut(s) 699, 723, 795, 911, 1323, 1613, 1686, 2010, 2026
Sau3AI GATC 7 cut(s) 682, 693, 1191, 1567, 1572, 1874, 1993
Sau96I GGNCC 6 cut(s) 250, 326, 377, 420, 490, 1739
ScaI AGTACT 1 cut(s) 835
SchI GAGTC 6 cut(s) 188, 871, 1151, 1736, 1931, 1973
ScrFI CCNGG 5 cut(s) 583, 670, 777, 1010, 1424
SduI GDGCHC 6 cut(s) 231, 401, 596, 1347, 1435, 1695
SexAI ACCWGGT 1 cut(s) 1422
SfaNI GCATC 2 cut(s) 724, 1598
SfcI CTRYAG 1 cut(s) 1617
SfoI GGCGCC 1 cut(s) 603
Sfr274I CTCGAG 3 cut(s) 1382, 1694, 1816
Sfr303I CCGCGG 2 cut(s) 225, 395
SfuI TTCGAA 1 cut(s) 629
SgrBI CCGCGG 2 cut(s) 225, 395
SinI GGWCC 4 cut(s) 250, 326, 420, 490
SlaI CTCGAG 3 cut(s) 1382, 1694, 1816
SmiMI CAYNNNNRTG 4 cut(s) 270, 440, 844, 850
SmlI CTYRAG 5 cut(s) 1232, 1382, 1694, 1724, 1816
SmoI CTYRAG 5 cut(s) 1232, 1382, 1694, 1724, 1816
SphI GCATGC 1 cut(s) 1628
Sse9I AATT 5 cut(s) 81, 826, 930, 1530, 2023
SspDI GGCGCC 1 cut(s) 601
SspMI CTAG 3 cut(s) 645, 1754, 1764
SstI GAGCTC 1 cut(s) 1695
StyD4I CCNGG 5 cut(s) 581, 668, 775, 1008, 1422
StyI CCWWGG 1 cut(s) 817
TaaI ACNGT 5 cut(s) 577, 598, 638, 973, 1618
TaiI ACGT 6 cut(s) 249, 315, 419, 479, 1352, 1541
TaqII GACCGA 4 cut(s) 340, 375, 504, 539
TasI AATT 5 cut(s) 81, 826, 930, 1530, 2023
TatI WGTACW 1 cut(s) 833
TfiI GAWTC 5 cut(s) 1357, 1523, 1599, 1676, 1757
Tru1I TTAA 9 cut(s) 699, 723, 795, 911, 1323, 1613, 1686, 2010, 2026
Tru9I TTAA 9 cut(s) 699, 723, 795, 911, 1323, 1613, 1686, 2010, 2026
TscAI CASTG 1 cut(s) 643
TseFI GTSAC 8 cut(s) 356, 520, 577, 896, 1143, 1439, 1719, 1867
TseI GCWGC 5 cut(s) 69, 728, 957, 1091, 2017
Tsp45I GTSAC 8 cut(s) 356, 520, 577, 896, 1143, 1439, 1719, 1867
TspDTI ATGAA 3 cut(s) 1097, 1379, 1866
TspRI CASTG 1 cut(s) 643
VpaK11BI GGWCC 4 cut(s) 250, 326, 420, 490
XapI RAATTY 1 cut(s) 1530
XceI RCATGY 2 cut(s) 1628, 1916
XcmI CCANNNNNNNNNTGG 1 cut(s) 1126
XhoI CTCGAG 3 cut(s) 1382, 1694, 1816
XmnI GAANNNNTTC 1 cut(s) 1004
XspI CTAG 3 cut(s) 645, 1754, 1764
ZrmI AGTACT 1 cut(s) 835
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.