Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0011005

Physical Location & Seq

Genomic Coordinates Reverse (-)

11600880 .. 11604578

Gene Structure 3699 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG130000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1950 bp

ATGGGTTGTTGTTACTCGAAAATCGAGAGGCAAGAAATGGTGTCGAGATGTAAATCGAGAAAGAGGTACATGAAGCAGTTGGTCAAGGCAAGACAAGCTTGGTCGGCTTCACACTCCATGTACCTGCGATCTCTCCGAAGCACAGGTGCTGCTCTGCTCCAATTTTCAAATGCCGAAACTACCCTCCACCACCAGCACCACCCCACCCACCCAACCCAACACCAGTCCCACCACCTCAACAACCACACCCACCACTCGCCGCCGCCGCCGCCTCAAACCCCACAGACTCCGCTTCAACCGCCTCCGCCTCCTCCGCGGAGCCCAAGCTCCGAGACCACGTGGACCTCCACAGCCTCCACCGCCATGCCGCCGCCTCCGCCGCCGCCGCCGTCGTCCACGTGGGATTTCTGGGACCCTTTTGTGCCGGCTTCGTCTCGGTCGGTGACCGAGGAGGAATGGGAGGCTACGACCACCGCGTCGGAGGCGGTGGTTACGACTGTCACCGGGGCGGCGAGCACCGTGGCGCCGCCTTCGGTTGTTAGTGGGTTTTCGAAGGACAGTGAGGCTAGCTCGATGGCAATGGTGGTGTCCAGGAATGCTAAGGATCTGGTGGAGATCATTAAGGAGCTTGATGAGTATTTTCTTAAAGCTGCCGATGCGGGTGGCCATCTCTCGTTTCTCTTGGAAGTTCCCACTCCTGGATTTTCTTCTCAGATTAAAGGAGGTAAAGTATATAACCATGGTTGTAATTTGAGTACTCCATCTACATGGACATGGGGTTCGAGTCCTAAACTCAATGGTTTCGGGAAAATGGGTTGTGACGAAATGGTGTTAAGTCATTTAGGCAGCGAAATTGGGACTGATGGTGTGGTACATAGCAGCCATTGTTCTACTGTGGAGAGGCTCTATGCTTGGGAAAAGAAACTATTCCAGGAGGTCAAGGAGGCAGAGACAATAAAGACAGAGCATGAGAAGAGGGTGTCAACATTGAAGAAGTTAGAGATGAAGAGGGCAGCAGACTATGTGAAGACTGAGAAGACCAAGAAAGAGGTGGAAAGGTTGGAGTCACAAATGATGGTTTCTTCTCAGGCCATTGAGACAACTTCTGCTGAGATCATCAAGATAAGGGACACAGAGTTGTACCCTCAACTACTTGAGCTTGTCAAAGGATTGATGTGTATGTGGAGAACCATGTATGAGTGCCACCAAGTCCAGAAGCATATAGTTCAGCAACTCAAATACCTTAACACCATACCATCTACTGAGCCCACGTCTGAGATTCACAGGCAATCAACTCTCCAGCTCGAGGTTCATGTCCAGCAATGGCACCAGTCCTTTTGCAACCTGGTCAGGGCTCAATGTGACTATATCCAGTCCCTTACAGGATGGCTCCGGCTTAGCCTCTTCCAGTTTAGGAGAAATCCTTTACCAAGAACAAGTCAAGAATCAAGAATTTACACGTTCTGTGAAGAATGGCACCATGCAGTTGATCGGATCCCAGACAAAGTAGCATCTGAAGGAATCAAGAGCTTTTTAACTGTAGTGCATGCAATTGTAGTTCAACAAGCCGAAGAAAACAAGCAAAAAAAGAAGTCAGAATCTGCATTTAAAGAGCTCGAGAGGAAGTCAAGTCAACTTAGGTCACTTGAGTCCAAACATGGCCCTTTCTCAATGCTAGATTCCTCTAGCTCTACTGCAAAGAACCCAGTCGCTGATAAGCGAGCAAAGGTGGAGAACTCGAGAGTAAAAGCAGAAGAGGAGAAGAGCAAGCATGAAAAGTTTGTGAGCGTGACAAGATCCATGACCATAAATAACTTGCAGATGGGGTTTCCACATGTGTTTGAGTCGATGGTAGGCTTTTCAAGTGTGTGTATGCAGGCGTTCGAGTCATTATATAACCAAGCCAAAAGCGTTGATCAGGAGCTGGATGTTAAGAGGCTACTAAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF630 DUF632 Ras

Protein Analysis

649

Amino Acids

73.26

Weight (kDa)

8.54

Isoelectric Point (pI)

56.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF630	PF04783	1 - 59	5.5e-21	Protein of unknown function (DUF630)
DUF632	PF04782	203 - 516	1.9e-105	Protein of unknown function (DUF632)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011005)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51290 AT3G51290 AT3G51290
fragaria_vesca	FvH4_1g11480 FvH4_1g11480
malus_domestica	MD15G1242800.v1.1
prunus_persica	Prupe.7G171300_v2.0.a1 Prupe.7G171300_v2.0.a1
pyrus_communis	pycom02g09980 pycom15g21400
rosa_chinensis	RchiOBHm_Chr2g0099091
rosa_laevigata	RLG00000016847
rosa_multiflora	Rmu_sc0012098.1_g000004
rosa_roxburghii	Rroxscaffold_2G00143450
rosa_rugosa	Rorug02G0076600
rosa_samantha	Rh2AG125700 Rh2BG129000 Rh2CG130000 Rh2DG130400
rosa_wichuraiana	Rw2G009680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	475
Acc36I	ACCTGC	1 cut(s)	132
AccB1I	GGYRCC	3 cut(s)	523, 1326, 1476
AccII	CGCG	2 cut(s)	316, 476
AclWI	GGATC	4 cut(s)	612, 1489, 1502, 1791
AcoI	YGGCCR	1 cut(s)	664
AcsI	RAATTY	1 cut(s)	1452
AcuI	CTGAAG	1 cut(s)	1536
AcvI	CACGTG	2 cut(s)	339, 399
AcyI	GRCGYC	1 cut(s)	524
AfaI	GTAC	5 cut(s)	68, 122, 757, 873, 1142
AfiI	CCNNNNNNNGG	3 cut(s)	698, 1306, 1351
AflIII	ACRYGT	2 cut(s)	1458, 1834
AgsI	TTSAA	5 cut(s)	168, 296, 991, 1562, 1863
AjiI	CACGTC	1 cut(s)	1272
AjnI	CCWGG	4 cut(s)	590, 697, 930, 1344
AloI	GAACNNNNNNTCC	2 cut(s)	763, 795
Alw21I	GWGCWC	2 cut(s)	518, 1617
Alw26I	GTCTC	4 cut(s)	326, 438, 944, 1091
AlwI	GGATC	4 cut(s)	612, 1489, 1502, 1791
AlwNI	CAGNNNCTG	4 cut(s)	149, 1601, 1712, 1924
Ama87I	CYCGRG	3 cut(s)	1304, 1616, 1738
AoxI	GGCC	3 cut(s)	664, 1089, 1660
ApeKI	GCWGC	5 cut(s)	149, 650, 846, 879, 1013
ApoI	RAATTY	1 cut(s)	1452
ArsI	GACNNNNNNTTYG	2 cut(s)	763, 795
Asp700I	GAANNNNTTC	1 cut(s)	926
AspLEI	GCGC	1 cut(s)	526
AspS9I	GGNCC	3 cut(s)	342, 412, 1661
AsuC2I	CCSGG	1 cut(s)	505
AsuHPI	GGTGA	2 cut(s)	454, 493
AsuII	TTCGAA	1 cut(s)	551
AsuNHI	GCTAGC	1 cut(s)	566
AvaI	CYCGRG	3 cut(s)	1304, 1616, 1738
AvaII	GGWCC	2 cut(s)	342, 412
BalI	TGGCCA	1 cut(s)	666
BamHI	GGATCC	1 cut(s)	1494
BanI	GGYRCC	3 cut(s)	523, 1326, 1476
BanII	GRGCYC	4 cut(s)	323, 1269, 1357, 1617
BbrPI	CACGTG	2 cut(s)	339, 399
BbsI	GAAGAC	2 cut(s)	1034, 1043
Bbv12I	GWGCWC	2 cut(s)	518, 1617
BbvI	GCAGC	5 cut(s)	136, 637, 858, 891, 1025
BccI	CCATC	9 cut(s)	568, 675, 769, 857, 1069, 1264, 1380, 1816, 1843
BceAI	ACGGC	1 cut(s)	373
BciT130I	CCWGG	4 cut(s)	592, 699, 932, 1346
BclI	TGATCA	1 cut(s)	1915
BcnI	CCSGG	1 cut(s)	505
BcoDI	GTCTC	4 cut(s)	326, 438, 944, 1091
BfaI	CTAG	3 cut(s)	567, 1676, 1686
BfmI	CTRYAG	1 cut(s)	1539
BfoI	RGCGCY	1 cut(s)	527
BfuAI	ACCTGC	1 cut(s)	132
BlpI	GCTNAGC	1 cut(s)	1397
BmcAI	AGTACT	1 cut(s)	757
Bme1390I	CCNGG	5 cut(s)	505, 592, 699, 932, 1346
Bme18I	GGWCC	2 cut(s)	342, 412
BmeT110I	CYCGRG	3 cut(s)	1304, 1616, 1738
BmgBI	CACGTC	1 cut(s)	1272
BmgT120I	GGNCC	3 cut(s)	342, 412, 1661
BmiI	GGNNCC	8 cut(s)	320, 413, 414, 525, 1328, 1391, 1478, 1496
BmrFI	CCNGG	5 cut(s)	505, 592, 699, 932, 1346
BmrI	ACTGGG	1 cut(s)	1700
BmsI	GCATC	2 cut(s)	646, 1520
BmtI	GCTAGC	1 cut(s)	570
BmuI	ACTGGG	1 cut(s)	1700
BpiI	GAAGAC	2 cut(s)	1034, 1043
BplI	GAGNNNNNCTC	2 cut(s)	554, 586
BpmI	CTGGAG	1 cut(s)	1283
Bpu10I	CCTNAGC	1 cut(s)	600
Bpu1102I	GCTNAGC	1 cut(s)	1397
Bpu14I	TTCGAA	1 cut(s)	551
BpuEI	CTTGAG	2 cut(s)	1175, 1667
BpuMI	CCSGG	1 cut(s)	505
BsaAI	YACGTR	2 cut(s)	339, 399
BsaBI	GATNNNNATC	1 cut(s)	52
BsaHI	GRCGYC	1 cut(s)	524
BsaI	GGTCTC	1 cut(s)	326
BsaJI	CCNNGG	5 cut(s)	314, 447, 504, 519, 739
BsaXI	ACNNNNNCTCC	2 cut(s)	714, 744
Bsc4I	CCNNNNNNNGG	3 cut(s)	698, 1306, 1351
Bse118I	RCCGGY	1 cut(s)	424
Bse1I	ACTGG	5 cut(s)	223, 1330, 1372, 1408, 1706
Bse3DI	GCAATG	2 cut(s)	585, 1328
Bse8I	GATNNNNATC	1 cut(s)	52
BseBI	CCWGG	4 cut(s)	592, 699, 932, 1346
BseDI	CCNNGG	5 cut(s)	314, 447, 504, 519, 739
BseGI	GGATG	2 cut(s)	1391, 1933
BseJI	GATNNNNATC	1 cut(s)	52
BseLI	CCNNNNNNNGG	3 cut(s)	698, 1306, 1351
BseMI	GCAATG	2 cut(s)	585, 1328
BseMII	CTCAG	6 cut(s)	725, 1023, 1100, 1101, 1254, 1266
BseNI	ACTGG	5 cut(s)	223, 1330, 1372, 1408, 1706
BseRI	GAGGAG	3 cut(s)	300, 464, 1772
BseXI	GCAGC	5 cut(s)	136, 637, 858, 891, 1025
Bsh1236I	CGCG	2 cut(s)	316, 476
Bsh1285I	CGRYCG	1 cut(s)	440
BshFI	GGCC	3 cut(s)	666, 1091, 1662
BshNI	GGYRCC	3 cut(s)	523, 1326, 1476
BsiEI	CGRYCG	1 cut(s)	440
BsiHKAI	GWGCWC	2 cut(s)	518, 1617
BsiHKCI	CYCGRG	3 cut(s)	1304, 1616, 1738
BsiSI	CCGG	3 cut(s)	425, 504, 1393
BslFI	GGGAC	5 cut(s)	211, 425, 871, 1142, 1360
BslI	CCNNNNNNNGG	3 cut(s)	698, 1306, 1351
BsmAI	GTCTC	4 cut(s)	326, 438, 944, 1091
BsmBI	CGTCTC	1 cut(s)	438
BsmFI	GGGAC	5 cut(s)	211, 425, 871, 1142, 1360
BsmI	GAATGC	1 cut(s)	601
BsnI	GGCC	3 cut(s)	666, 1091, 1662
Bso31I	GGTCTC	1 cut(s)	326
BsoBI	CYCGRG	3 cut(s)	1304, 1616, 1738
Bsp119I	TTCGAA	1 cut(s)	551
Bsp1286I	GDGCHC	5 cut(s)	323, 518, 1269, 1357, 1617
Bsp143I	GATC	8 cut(s)	128, 604, 615, 1113, 1489, 1494, 1796, 1915
Bsp1720I	GCTNAGC	1 cut(s)	1397
Bsp19I	CCATGG	1 cut(s)	739
BspANI	GGCC	3 cut(s)	666, 1091, 1662
BspCNI	CTCAG	6 cut(s)	724, 1024, 1099, 1102, 1255, 1267
BspFNI	CGCG	2 cut(s)	316, 476
BspLI	GGNNCC	8 cut(s)	320, 413, 414, 525, 1328, 1391, 1478, 1496
BspMI	ACCTGC	1 cut(s)	132
BspOI	GCTAGC	1 cut(s)	570
BspPI	GGATC	4 cut(s)	612, 1489, 1502, 1791
BspQI	GCTCTTC	1 cut(s)	1757
BspT104I	TTCGAA	1 cut(s)	551
BspT107I	GGYRCC	3 cut(s)	523, 1326, 1476
BspTNI	GGTCTC	1 cut(s)	326
BsrDI	GCAATG	2 cut(s)	585, 1328
BsrFI	RCCGGY	1 cut(s)	424
BsrI	ACTGG	5 cut(s)	223, 1330, 1372, 1408, 1706
BssAI	RCCGGY	1 cut(s)	424
BssECI	CCNNGG	5 cut(s)	314, 447, 504, 519, 739
BssMI	GATC	8 cut(s)	128, 604, 615, 1113, 1489, 1494, 1796, 1915
BssNI	GRCGYC	1 cut(s)	524
BssT1I	CCWWGG	1 cut(s)	739
Bst2UI	CCWGG	4 cut(s)	592, 699, 932, 1346
Bst4CI	ACNGT	5 cut(s)	499, 520, 560, 895, 1540
Bst6I	CTCTTC	5 cut(s)	968, 1001, 1409, 1749, 1757
BstACI	GRCGYC	1 cut(s)	524
BstBAI	YACGTR	2 cut(s)	339, 399
BstBI	TTCGAA	1 cut(s)	551
BstC8I	GCNNGC	7 cut(s)	426, 514, 568, 1548, 1722, 1769, 1878
BstDEI	CTNAG	9 cut(s)	600, 711, 1032, 1086, 1110, 1263, 1275, 1397, 1637
BstDSI	CCRYGG	3 cut(s)	314, 519, 739
BstEII	GGTNACC	1 cut(s)	442
BstF5I	GGATG	2 cut(s)	1391, 1933
BstFNI	CGCG	2 cut(s)	316, 476
BstH2I	RGCGCY	1 cut(s)	527
BstHHI	GCGC	1 cut(s)	526
BstKTI	GATC	8 cut(s)	131, 607, 618, 1116, 1492, 1497, 1799, 1918
BstMAI	GTCTC	4 cut(s)	326, 438, 944, 1091
BstMBI	GATC	8 cut(s)	128, 604, 615, 1113, 1489, 1494, 1796, 1915
BstMCI	CGRYCG	1 cut(s)	440
BstNI	CCWGG	4 cut(s)	592, 699, 932, 1346
BstNSI	RCATGY	2 cut(s)	1550, 1838
BstPI	GGTNACC	1 cut(s)	442
BstSCI	CCNGG	5 cut(s)	503, 590, 697, 930, 1344
BstSFI	CTRYAG	1 cut(s)	1539
BstUI	CGCG	2 cut(s)	316, 476
BstV1I	GCAGC	5 cut(s)	136, 637, 858, 891, 1025
BstV2I	GAAGAC	2 cut(s)	1034, 1043
BstX2I	RGATCY	3 cut(s)	604, 1494, 1796
BstXI	CCANNNNNNTGG	1 cut(s)	768
BstYI	RGATCY	3 cut(s)	604, 1494, 1796
BsuRI	GGCC	3 cut(s)	666, 1091, 1662
BtgI	CCRYGG	3 cut(s)	314, 519, 739
BtrI	CACGTC	1 cut(s)	1272
BtsCI	GGATG	2 cut(s)	1391, 1933
BtsIMutI	CAGTG	1 cut(s)	565
BveI	ACCTGC	1 cut(s)	132
Cac8I	GCNNGC	7 cut(s)	426, 514, 568, 1548, 1722, 1769, 1878
CaiI	CAGNNNCTG	4 cut(s)	149, 1601, 1712, 1924
CfoI	GCGC	1 cut(s)	526
Cfr10I	RCCGGY	1 cut(s)	424
Cfr13I	GGNCC	3 cut(s)	342, 412, 1661
Cfr42I	CCGCGG	1 cut(s)	317
CseI	GACGC	1 cut(s)	465
CsiI	ACCWGGT	1 cut(s)	1344
Csp6I	GTAC	5 cut(s)	67, 121, 756, 872, 1141
CviQI	GTAC	5 cut(s)	67, 121, 756, 872, 1141
DdeI	CTNAG	9 cut(s)	600, 711, 1032, 1086, 1110, 1263, 1275, 1397, 1637
DinI	GGCGCC	1 cut(s)	525
DpnI	GATC	8 cut(s)	130, 606, 617, 1115, 1491, 1496, 1798, 1917
DpnII	GATC	8 cut(s)	128, 604, 615, 1113, 1489, 1494, 1796, 1915
DraI	TTTAAA	1 cut(s)	1609
DrdI	GACNNNNNNGTC	1 cut(s)	475
DseDI	GACNNNNNNGTC	1 cut(s)	475
EaeI	YGGCCR	1 cut(s)	664
Eam1104I	CTCTTC	5 cut(s)	968, 1001, 1409, 1749, 1757
EarI	CTCTTC	5 cut(s)	968, 1001, 1409, 1749, 1757
EciI	GGCGGA	2 cut(s)	294, 366
Ecl136II	GAGCTC	1 cut(s)	1615
Eco130I	CCWWGG	1 cut(s)	739
Eco24I	GRGCYC	4 cut(s)	323, 1269, 1357, 1617
Eco31I	GGTCTC	1 cut(s)	326
Eco47I	GGWCC	2 cut(s)	342, 412
Eco53kI	GAGCTC	1 cut(s)	1615
Eco57I	CTGAAG	1 cut(s)	1536
Eco72I	CACGTG	2 cut(s)	339, 399
Eco88I	CYCGRG	3 cut(s)	1304, 1616, 1738
Eco91I	GGTNACC	1 cut(s)	442
EcoICRI	GAGCTC	1 cut(s)	1615
EcoO109I	RGGNCCY	1 cut(s)	412
EcoO65I	GGTNACC	1 cut(s)	442
EcoRII	CCWGG	4 cut(s)	590, 697, 930, 1344
EcoT14I	CCWWGG	1 cut(s)	739
EcoT38I	GRGCYC	4 cut(s)	323, 1269, 1357, 1617
EgeI	GGCGCC	1 cut(s)	525
EheI	GGCGCC	1 cut(s)	525
ErhI	CCWWGG	1 cut(s)	739
Esp3I	CGTCTC	1 cut(s)	438
FalI	AAGNNNNNCTT	2 cut(s)	82, 114
FaqI	GGGAC	5 cut(s)	211, 425, 871, 1142, 1360
FauI	CCCGC	1 cut(s)	652
FbaI	TGATCA	1 cut(s)	1915
FokI	GGATG	2 cut(s)	1398, 1940
FriOI	GRGCYC	4 cut(s)	323, 1269, 1357, 1617
FspBI	CTAG	3 cut(s)	567, 1676, 1686
GlaI	GCGC	1 cut(s)	525
GsuI	CTGGAG	1 cut(s)	1283
HaeII	RGCGCY	1 cut(s)	527
HaeIII	GGCC	3 cut(s)	666, 1091, 1662
HapII	CCGG	3 cut(s)	425, 504, 1393
HgaI	GACGC	1 cut(s)	465
HhaI	GCGC	1 cut(s)	526
Hin1I	GRCGYC	1 cut(s)	524
Hin6I	GCGC	1 cut(s)	524
HinP1I	GCGC	1 cut(s)	524
HincII	GTYRAC	2 cut(s)	984, 1634
HindII	GTYRAC	2 cut(s)	984, 1634
HindIII	AAGCTT	1 cut(s)	96
HpaII	CCGG	3 cut(s)	425, 504, 1393
HphI	GGTGA	2 cut(s)	454, 493
Hpy166II	GTNNAC	4 cut(s)	342, 396, 984, 1634
Hpy188I	TCNGA	8 cut(s)	137, 331, 481, 714, 1276, 1494, 1516, 1597
Hpy8I	GTNNAC	4 cut(s)	342, 396, 984, 1634
Hpy99I	CGWCG	2 cut(s)	394, 481
HpyAV	CCTTC	3 cut(s)	540, 547, 1511
HpyCH4III	ACNGT	5 cut(s)	499, 520, 560, 895, 1540
HpyCH4IV	ACGT	4 cut(s)	338, 398, 1271, 1460
HpyCH4V	TGCA	8 cut(s)	1341, 1484, 1546, 1550, 1604, 1697, 1819, 1876
HpyF3I	CTNAG	9 cut(s)	600, 711, 1032, 1086, 1110, 1263, 1275, 1397, 1637
HpySE526I	ACGT	4 cut(s)	338, 398, 1271, 1460
Hsp92I	GRCGYC	1 cut(s)	524
HspAI	GCGC	1 cut(s)	524
KasI	GGCGCC	1 cut(s)	523
KflI	GGGWCCC	1 cut(s)	412
KroI	GCCGGC	1 cut(s)	424
KroNI	GCCGGC	1 cut(s)	426
Ksp22I	TGATCA	1 cut(s)	1915
KspI	CCGCGG	1 cut(s)	317
Kzo9I	GATC	8 cut(s)	128, 604, 615, 1113, 1489, 1494, 1796, 1915
LguI	GCTCTTC	1 cut(s)	1757
LmnI	GCTCC	6 cut(s)	162, 318, 332, 625, 1395, 1921
Lsp1109I	GCAGC	5 cut(s)	136, 637, 858, 891, 1025
LweI	GCATC	2 cut(s)	646, 1520
MabI	ACCWGGT	1 cut(s)	1344
MaeI	CTAG	3 cut(s)	567, 1676, 1686
MaeII	ACGT	4 cut(s)	338, 398, 1271, 1460
MaeIII	GTNAC	9 cut(s)	11, 442, 490, 499, 818, 1065, 1361, 1641, 1789
MalI	GATC	8 cut(s)	130, 606, 617, 1115, 1491, 1496, 1798, 1917
MboI	GATC	8 cut(s)	128, 604, 615, 1113, 1489, 1494, 1796, 1915
MfeI	CAATTG	1 cut(s)	1551
MflI	RGATCY	3 cut(s)	604, 1494, 1796
MhlI	GDGCHC	5 cut(s)	323, 518, 1269, 1357, 1617
MlsI	TGGCCA	1 cut(s)	666
MluCI	AATT	6 cut(s)	161, 748, 852, 1452, 1551, 1945
MluNI	TGGCCA	1 cut(s)	666
Mly113I	GGCGCC	1 cut(s)	524
MlyI	GAGTC	6 cut(s)	280, 793, 1073, 1658, 1853, 1895
MmeI	TCCRAC	2 cut(s)	459, 1041
Mox20I	TGGCCA	1 cut(s)	666
MroNI	GCCGGC	1 cut(s)	424
MroXI	GAANNNNTTC	1 cut(s)	926
MscI	TGGCCA	1 cut(s)	666
MseI	TTAA	9 cut(s)	621, 645, 717, 833, 1245, 1535, 1608, 1932, 1948
MslI	CAYNNNNRTG	3 cut(s)	362, 766, 772
Msp20I	TGGCCA	1 cut(s)	666
MspA1I	CMGCKG	1 cut(s)	316
MspI	CCGG	3 cut(s)	425, 504, 1393
MspR9I	CCNGG	5 cut(s)	505, 592, 699, 932, 1346
MunI	CAATTG	1 cut(s)	1551
Mva1269I	GAATGC	1 cut(s)	601
MvaI	CCWGG	4 cut(s)	592, 699, 932, 1346
MvnI	CGCG	2 cut(s)	316, 476
NaeI	GCCGGC	1 cut(s)	426
NarI	GGCGCC	1 cut(s)	524
NciI	CCSGG	1 cut(s)	505
NcoI	CCATGG	1 cut(s)	739
NdeII	GATC	8 cut(s)	128, 604, 615, 1113, 1489, 1494, 1796, 1915
NgoMIV	GCCGGC	1 cut(s)	424
NheI	GCTAGC	1 cut(s)	566
NlaIV	GGNNCC	8 cut(s)	320, 413, 414, 525, 1328, 1391, 1478, 1496
NmuCI	GTSAC	7 cut(s)	442, 499, 818, 1065, 1361, 1641, 1789
NspI	RCATGY	2 cut(s)	1550, 1838
NspV	TTCGAA	1 cut(s)	551
PaeI	GCATGC	1 cut(s)	1550
PaeR7I	CTCGAG	3 cut(s)	1304, 1616, 1738
PciI	ACATGT	1 cut(s)	1834
PciSI	GCTCTTC	1 cut(s)	1757
PcsI	WCGNNNNNNNCGW	1 cut(s)	473
PctI	GAATGC	1 cut(s)	601
PdiI	GCCGGC	1 cut(s)	426
PdmI	GAANNNNTTC	1 cut(s)	926
PfeI	GAWTC	5 cut(s)	1279, 1445, 1521, 1598, 1679
PfoI	TCCNGGA	3 cut(s)	590, 697, 930
PleI	GAGTC	6 cut(s)	280, 792, 1072, 1657, 1852, 1894
PluTI	GGCGCC	1 cut(s)	527
PmaCI	CACGTG	2 cut(s)	339, 399
PmlI	CACGTG	2 cut(s)	339, 399
PpsI	GAGTC	6 cut(s)	280, 792, 1072, 1657, 1852, 1894
Ppu21I	YACGTR	2 cut(s)	339, 399
PpuMI	RGGWCCY	1 cut(s)	412
PscI	ACATGT	1 cut(s)	1834
Psp124BI	GAGCTC	1 cut(s)	1617
Psp5II	RGGWCCY	1 cut(s)	412
Psp6I	CCWGG	4 cut(s)	590, 697, 930, 1344
PspCI	CACGTG	2 cut(s)	339, 399
PspEI	GGTNACC	1 cut(s)	442
PspGI	CCWGG	4 cut(s)	590, 697, 930, 1344
PspN4I	GGNNCC	8 cut(s)	320, 413, 414, 525, 1328, 1391, 1478, 1496
PspPI	GGNCC	3 cut(s)	342, 412, 1661
PspPPI	RGGWCCY	1 cut(s)	412
PspXI	VCTCGAGB	1 cut(s)	1304
PstNI	CAGNNNCTG	4 cut(s)	149, 1601, 1712, 1924
PsuI	RGATCY	3 cut(s)	604, 1494, 1796
RsaI	GTAC	5 cut(s)	68, 122, 757, 873, 1142
RsaNI	GTAC	5 cut(s)	67, 121, 756, 872, 1141
RseI	CAYNNNNRTG	3 cut(s)	362, 766, 772
SacI	GAGCTC	1 cut(s)	1617
SacII	CCGCGG	1 cut(s)	317
SapI	GCTCTTC	1 cut(s)	1757
SaqAI	TTAA	9 cut(s)	621, 645, 717, 833, 1245, 1535, 1608, 1932, 1948
Sau3AI	GATC	8 cut(s)	128, 604, 615, 1113, 1489, 1494, 1796, 1915
Sau96I	GGNCC	3 cut(s)	342, 412, 1661
ScaI	AGTACT	1 cut(s)	757
SchI	GAGTC	6 cut(s)	280, 793, 1073, 1658, 1853, 1895
ScrFI	CCNGG	5 cut(s)	505, 592, 699, 932, 1346
SduI	GDGCHC	5 cut(s)	323, 518, 1269, 1357, 1617
SexAI	ACCWGGT	1 cut(s)	1344
SfaNI	GCATC	2 cut(s)	646, 1520
SfcI	CTRYAG	1 cut(s)	1539
SfoI	GGCGCC	1 cut(s)	525
Sfr274I	CTCGAG	3 cut(s)	1304, 1616, 1738
Sfr303I	CCGCGG	1 cut(s)	317
SfuI	TTCGAA	1 cut(s)	551
SgrBI	CCGCGG	1 cut(s)	317
SinI	GGWCC	2 cut(s)	342, 412
SlaI	CTCGAG	3 cut(s)	1304, 1616, 1738
SmiMI	CAYNNNNRTG	3 cut(s)	362, 766, 772
SmlI	CTYRAG	5 cut(s)	1154, 1304, 1616, 1646, 1738
SmoI	CTYRAG	5 cut(s)	1154, 1304, 1616, 1646, 1738
SphI	GCATGC	1 cut(s)	1550
Sse9I	AATT	6 cut(s)	161, 748, 852, 1452, 1551, 1945
SspDI	GGCGCC	1 cut(s)	523
SspMI	CTAG	3 cut(s)	567, 1676, 1686
SstI	GAGCTC	1 cut(s)	1617
StyD4I	CCNGG	5 cut(s)	503, 590, 697, 930, 1344
StyI	CCWWGG	1 cut(s)	739
TaaI	ACNGT	5 cut(s)	499, 520, 560, 895, 1540
TaiI	ACGT	4 cut(s)	341, 401, 1274, 1463
TaqII	GACCGA	2 cut(s)	426, 461
TasI	AATT	6 cut(s)	161, 748, 852, 1452, 1551, 1945
TatI	WGTACW	1 cut(s)	755
TfiI	GAWTC	5 cut(s)	1279, 1445, 1521, 1598, 1679
Tru1I	TTAA	9 cut(s)	621, 645, 717, 833, 1245, 1535, 1608, 1932, 1948
Tru9I	TTAA	9 cut(s)	621, 645, 717, 833, 1245, 1535, 1608, 1932, 1948
TscAI	CASTG	1 cut(s)	565
TseFI	GTSAC	7 cut(s)	442, 499, 818, 1065, 1361, 1641, 1789
TseI	GCWGC	5 cut(s)	149, 650, 846, 879, 1013
Tsp45I	GTSAC	7 cut(s)	442, 499, 818, 1065, 1361, 1641, 1789
TspDTI	ATGAA	4 cut(s)	86, 1019, 1301, 1788
TspRI	CASTG	1 cut(s)	565
VpaK11BI	GGWCC	2 cut(s)	342, 412
XapI	RAATTY	1 cut(s)	1452
XceI	RCATGY	2 cut(s)	1550, 1838
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1048
XhoI	CTCGAG	3 cut(s)	1304, 1616, 1738
XmnI	GAANNNNTTC	1 cut(s)	926
XspI	CTAG	3 cut(s)	567, 1676, 1686
ZrmI	AGTACT	1 cut(s)	757

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.