Rmu_sc0013280.1_g000011

Serine/Threonine protein kinases, catalytic domain

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013280.1
Physical Location & Seq
Reverse (-)
36835 .. 38511
1677 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013280.1_g000011.1.cds

Sequence Viewer

Length: 1251 bp
atgcggtgggacgcgattcaatccgtgaaggccaaagacggcgagttgggtctgaaccatttcaggcttctgaagaagcttgggtgtggggacatagggagcgtgtacttggctgagttgagagggattggttgcgttttcgccatgaaagtaatggacaagggaatgttggctgggaggaagaagctgatgagagctcagactgagagagacatattggggttgctggaccacccgtttcttccgaccctttattcgaatttcgagactgacaagttttcttgcttgttaatggagttctgcagcggcggcgatcttcatacgctccggcagcgccagccggggaagcattttactgaactagctgcgaggttttatgcttcagaagtgcttcttgctcttgagtatctgcacatgatgggggtggtgtacagggacttgaaacccgaaaatgtactagtgagggaggatggacatatcatgctttcggattttgatttatcattaagatgtaatgtgtgtcctactcttgttcagtccagcaccgagccatcttgtgcaatgcctacatactgcattcaaccatcttgcattgatccaattccagcctgcaaactaccggtttgtgttcaaccctcttgcttgcaaccttcttgctttacgcctcgattcctaaggtccaaaacgaccaaggagaaaactgaacgaacgaatttggggagttcagattcgaggcctgaacttattgctgagccaactaatgcacggtccatgtcatttgttggaactcatgaatatttagctcctgagatcataaggggagatggtcatggcagtgctgttgattggtggactttcggaatcttcttgtatgagctacttcatgggaggacaccatttaaagggagtggaaatcgggagacattgttcaatgtcgttggtcagtcgcttaagttcccggatggatccaacattagttttgctgccaaggatttgatcaagggcctgcttgtaaagaaccctcaaaagagactaggctttaaaagaggtgctacagagattaagcagcatcccttctttgctagcgtgaattgggctctcattcgtggcacgcagcctccagaaatcccaaaaccacttgatcttgcccttttaaaccagtcattcaagtcggcagcgcctcaaaatgagaagggagctacagagacaactcggttaccaggtccatatttagactttgaatttttctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

416

Amino Acids

46.49

Weight (kDa)

8.6

Isoelectric Point (pI)

42.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 14
AciI CCGC 3 cut(s) 4, 306, 309
AclWI GGATC 3 cut(s) 590, 960, 973
AcsI RAATTY 3 cut(s) 259, 712, 1241
AcuI CTGAAG 2 cut(s) 92, 366
AfaI GTAC 3 cut(s) 107, 431, 456
AfiI CCNNNNNNNGG 1 cut(s) 902
AflII CTTAAG 1 cut(s) 950
AgeI ACCGGT 1 cut(s) 619
AgsI TTSAA 7 cut(s) 20, 442, 581, 632, 931, 1168, 1241
AhlI ACTAGT 1 cut(s) 457
AjnI CCWGG 1 cut(s) 1219
AloI GAACNNNNNNTCC 2 cut(s) 911, 943
AluBI AGCT 7 cut(s) 79, 187, 197, 365, 803, 877, 1199
AluI AGCT 7 cut(s) 79, 187, 197, 365, 803, 877, 1199
Alw21I GWGCWC 1 cut(s) 199
Alw26I GTCTC 5 cut(s) 204, 260, 914, 1024, 1199
AlwI GGATC 3 cut(s) 590, 960, 973
AoxI GGCC 3 cut(s) 30, 734, 1003
ApeKI GCWGC 7 cut(s) 303, 331, 365, 983, 1066, 1114, 1175
ApoI RAATTY 3 cut(s) 259, 712, 1241
ArsI GACNNNNNNTTYG 2 cut(s) 238, 270
AsiGI ACCGGT 1 cut(s) 619
Asp700I GAANNNNTTC 2 cut(s) 59, 390
AspLEI GCGC 2 cut(s) 336, 1180
AspS9I GGNCC 5 cut(s) 229, 678, 768, 1003, 1223
AsuC2I CCSGG 2 cut(s) 342, 959
AsuII TTCGAA 1 cut(s) 257
AsuNHI GCTAGC 1 cut(s) 1082
AvaII GGWCC 4 cut(s) 229, 678, 768, 1223
AxyI CCTNAGG 1 cut(s) 674
BamHI GGATCC 1 cut(s) 965
BanII GRGCYC 2 cut(s) 199, 1099
Bbv12I GWGCWC 1 cut(s) 199
BbvI GCAGC 7 cut(s) 315, 343, 352, 970, 1078, 1126, 1187
BccI CCATC 6 cut(s) 412, 464, 559, 592, 818, 956
BceAI ACGGC 1 cut(s) 55
BciT130I CCWGG 1 cut(s) 1221
BclI TGATCA 1 cut(s) 996
BcnI CCSGG 2 cut(s) 342, 959
BcoDI GTCTC 5 cut(s) 204, 260, 914, 1024, 1199
BcuI ACTAGT 1 cut(s) 457
BfaI CTAG 4 cut(s) 362, 458, 1034, 1083
BfmI CTRYAG 3 cut(s) 301, 1053, 1200
BfoI RGCGCY 2 cut(s) 337, 1181
BfrI CTTAAG 1 cut(s) 950
BisI GCNGC 9 cut(s) 304, 307, 310, 332, 366, 984, 1067, 1115, 1176
BlpI GCTNAGC 1 cut(s) 750
BlsI GCNGC 9 cut(s) 305, 308, 311, 333, 367, 985, 1068, 1116, 1177
Bme1390I CCNGG 3 cut(s) 342, 959, 1221
Bme18I GGWCC 4 cut(s) 229, 678, 768, 1223
BmgT120I GGNCC 5 cut(s) 229, 678, 768, 1003, 1223
BmiI GGNNCC 1 cut(s) 967
BmrFI CCNGG 3 cut(s) 342, 959, 1221
BmsI GCATC 1 cut(s) 1078
BmtI GCTAGC 1 cut(s) 1086
BpmI CTGGAG 1 cut(s) 1104
Bpu1102I GCTNAGC 1 cut(s) 750
Bpu14I TTCGAA 1 cut(s) 257
BpuEI CTTGAG 1 cut(s) 422
BpuMI CCSGG 2 cut(s) 342, 959
BsaJI CCNNGG 3 cut(s) 341, 690, 987
BsaWI WCCGGW 1 cut(s) 619
BsaXI ACNNNNNCTCC 4 cut(s) 911, 941, 1102, 1132
Bsc4I CCNNNNNNNGG 1 cut(s) 902
Bse118I RCCGGY 1 cut(s) 619
Bse1I ACTGG 1 cut(s) 1159
Bse21I CCTNAGG 1 cut(s) 674
Bse3DI GCAATG 1 cut(s) 567
BseBI CCWGG 1 cut(s) 1221
BseDI CCNNGG 3 cut(s) 341, 690, 987
BseGI GGATG 3 cut(s) 475, 967, 1069
BseLI CCNNNNNNNGG 1 cut(s) 902
BseMI GCAATG 1 cut(s) 567
BseMII CTCAG 5 cut(s) 105, 195, 212, 741, 798
BseNI ACTGG 1 cut(s) 1159
BseXI GCAGC 7 cut(s) 315, 343, 352, 970, 1078, 1126, 1187
BseYI CCCAGC 1 cut(s) 173
BsgI GTGCAG 1 cut(s) 395
Bsh1236I CGCG 1 cut(s) 14
BshFI GGCC 3 cut(s) 32, 736, 1005
BshTI ACCGGT 1 cut(s) 619
BsiHKAI GWGCWC 1 cut(s) 199
BsiSI CCGG 4 cut(s) 328, 341, 620, 959
BslFI GGGAC 3 cut(s) 23, 104, 449
BslI CCNNNNNNNGG 1 cut(s) 902
BsmAI GTCTC 5 cut(s) 204, 260, 914, 1024, 1199
BsmFI GGGAC 3 cut(s) 23, 104, 449
BsmI GAATGC 1 cut(s) 576
BsnI GGCC 3 cut(s) 32, 736, 1005
Bsp119I TTCGAA 1 cut(s) 257
Bsp1286I GDGCHC 2 cut(s) 199, 1099
Bsp1407I TGTACA 1 cut(s) 429
Bsp143I GATC 6 cut(s) 313, 595, 810, 965, 996, 1141
Bsp1720I GCTNAGC 1 cut(s) 750
BspACI CCGC 3 cut(s) 4, 306, 309
BspANI GGCC 3 cut(s) 32, 736, 1005
BspCNI CTCAG 5 cut(s) 106, 196, 211, 742, 799
BspFNI CGCG 1 cut(s) 14
BspHI TCATGA 1 cut(s) 790
BspLI GGNNCC 1 cut(s) 967
BspMAI CTGCAG 1 cut(s) 305
BspOI GCTAGC 1 cut(s) 1086
BspPI GGATC 3 cut(s) 590, 960, 973
BspT104I TTCGAA 1 cut(s) 257
BspTI CTTAAG 1 cut(s) 950
BsrDI GCAATG 1 cut(s) 567
BsrFI RCCGGY 1 cut(s) 619
BsrGI TGTACA 1 cut(s) 429
BsrI ACTGG 1 cut(s) 1159
BssAI RCCGGY 1 cut(s) 619
BssECI CCNNGG 3 cut(s) 341, 690, 987
BssMI GATC 6 cut(s) 313, 595, 810, 965, 996, 1141
BssT1I CCWWGG 2 cut(s) 690, 987
Bst2UI CCWGG 1 cut(s) 1221
Bst4CI ACNGT 1 cut(s) 768
BstAFI CTTAAG 1 cut(s) 950
BstAUI TGTACA 1 cut(s) 429
BstBI TTCGAA 1 cut(s) 257
BstC8I GCNNGC 6 cut(s) 338, 610, 644, 1007, 1084, 1112
BstDEI CTNAG 6 cut(s) 114, 198, 204, 674, 750, 807
BstEII GGTNACC 1 cut(s) 1215
BstF5I GGATG 3 cut(s) 475, 967, 1069
BstFNI CGCG 1 cut(s) 14
BstH2I RGCGCY 2 cut(s) 337, 1181
BstHHI GCGC 2 cut(s) 336, 1180
BstKTI GATC 6 cut(s) 316, 598, 813, 968, 999, 1144
BstMAI GTCTC 5 cut(s) 204, 260, 914, 1024, 1199
BstMBI GATC 6 cut(s) 313, 595, 810, 965, 996, 1141
BstMWI GCNNNNNNNGC 4 cut(s) 309, 331, 337, 346
BstNI CCWGG 1 cut(s) 1221
BstPI GGTNACC 1 cut(s) 1215
BstSCI CCNGG 3 cut(s) 340, 957, 1219
BstSFI CTRYAG 3 cut(s) 301, 1053, 1200
BstUI CGCG 1 cut(s) 14
BstV1I GCAGC 7 cut(s) 315, 343, 352, 970, 1078, 1126, 1187
BstX2I RGATCY 1 cut(s) 965
BstYI RGATCY 1 cut(s) 965
Bsu36I CCTNAGG 1 cut(s) 674
BsuRI GGCC 3 cut(s) 32, 736, 1005
BtsCI GGATG 3 cut(s) 475, 967, 1069
BtsI GCAGTG 1 cut(s) 841
BtsIMutI CAGTG 1 cut(s) 841
Cac8I GCNNGC 6 cut(s) 338, 610, 644, 1007, 1084, 1112
CciI TCATGA 1 cut(s) 790
CfoI GCGC 2 cut(s) 336, 1180
Cfr10I RCCGGY 1 cut(s) 619
Cfr13I GGNCC 5 cut(s) 229, 678, 768, 1003, 1223
CseI GACGC 1 cut(s) 20
CsiI ACCWGGT 1 cut(s) 1219
Csp6I GTAC 3 cut(s) 106, 430, 455
CspAI ACCGGT 1 cut(s) 619
CviAII CATG 7 cut(s) 145, 415, 481, 772, 791, 830, 884
CviQI GTAC 3 cut(s) 106, 430, 455
DdeI CTNAG 6 cut(s) 114, 198, 204, 674, 750, 807
DpnI GATC 6 cut(s) 315, 597, 812, 967, 998, 1143
DpnII GATC 6 cut(s) 313, 595, 810, 965, 996, 1141
DraI TTTAAA 3 cut(s) 901, 1042, 1155
Ecl136II GAGCTC 1 cut(s) 197
Eco130I CCWWGG 2 cut(s) 690, 987
Eco147I AGGCCT 1 cut(s) 736
Eco24I GRGCYC 2 cut(s) 199, 1099
Eco47I GGWCC 4 cut(s) 229, 678, 768, 1223
Eco53kI GAGCTC 1 cut(s) 197
Eco57I CTGAAG 2 cut(s) 92, 366
Eco81I CCTNAGG 1 cut(s) 674
Eco91I GGTNACC 1 cut(s) 1215
EcoICRI GAGCTC 1 cut(s) 197
EcoO109I RGGNCCY 1 cut(s) 1003
EcoO65I GGTNACC 1 cut(s) 1215
EcoRII CCWGG 1 cut(s) 1219
EcoT14I CCWWGG 2 cut(s) 690, 987
EcoT38I GRGCYC 2 cut(s) 199, 1099
ErhI CCWWGG 2 cut(s) 690, 987
FaeI CATG 7 cut(s) 148, 418, 484, 775, 794, 833, 887
FalI AAGNNNNNCTT 2 cut(s) 378, 410
FaqI GGGAC 3 cut(s) 23, 104, 449
FatI CATG 7 cut(s) 144, 414, 480, 771, 790, 829, 883
FbaI TGATCA 1 cut(s) 996
Fnu4HI GCNGC 9 cut(s) 304, 307, 310, 332, 366, 984, 1067, 1115, 1176
FokI GGATG 3 cut(s) 482, 974, 1056
FriOI GRGCYC 2 cut(s) 199, 1099
Fsp4HI GCNGC 9 cut(s) 304, 307, 310, 332, 366, 984, 1067, 1115, 1176
FspBI CTAG 4 cut(s) 362, 458, 1034, 1083
GlaI GCGC 2 cut(s) 335, 1179
GluI GCNGC 9 cut(s) 304, 307, 310, 332, 366, 984, 1067, 1115, 1176
GsaI CCCAGC 1 cut(s) 177
GsuI CTGGAG 1 cut(s) 1104
HaeII RGCGCY 2 cut(s) 337, 1181
HaeIII GGCC 3 cut(s) 32, 736, 1005
HapII CCGG 4 cut(s) 328, 341, 620, 959
HgaI GACGC 1 cut(s) 20
HhaI GCGC 2 cut(s) 336, 1180
Hin1II CATG 7 cut(s) 148, 418, 484, 775, 794, 833, 887
Hin6I GCGC 2 cut(s) 334, 1178
HinP1I GCGC 2 cut(s) 334, 1178
HindIII AAGCTT 1 cut(s) 77
HinfI GANTC 4 cut(s) 16, 669, 728, 861
HpaII CCGG 4 cut(s) 328, 341, 620, 959
Hpy166II GTNNAC 3 cut(s) 106, 430, 852
Hpy188I TCNGA 9 cut(s) 54, 72, 201, 246, 385, 490, 727, 860, 1250
Hpy188III TCNNGA 6 cut(s) 265, 401, 791, 806, 917, 1121
Hpy8I GTNNAC 3 cut(s) 106, 430, 852
HpyAV CCTTC 4 cut(s) 22, 660, 1084, 1186
HpyCH4III ACNGT 1 cut(s) 768
HpyCH4V TGCA 8 cut(s) 303, 412, 560, 576, 591, 612, 646, 764
HpyF10VI GCNNNNNNNGC 4 cut(s) 309, 331, 337, 346
HpyF3I CTNAG 6 cut(s) 114, 198, 204, 674, 750, 807
Hsp92II CATG 7 cut(s) 148, 418, 484, 775, 794, 833, 887
HspAI GCGC 2 cut(s) 334, 1178
Ksp22I TGATCA 1 cut(s) 996
Kzo9I GATC 6 cut(s) 313, 595, 810, 965, 996, 1141
LmnI GCTCC 4 cut(s) 99, 330, 808, 1196
Lsp1109I GCAGC 7 cut(s) 315, 343, 352, 970, 1078, 1126, 1187
LweI GCATC 1 cut(s) 1078
MabI ACCWGGT 1 cut(s) 1219
MaeI CTAG 4 cut(s) 362, 458, 1034, 1083
MaeIII GTNAC 1 cut(s) 1215
MalI GATC 6 cut(s) 315, 597, 812, 967, 998, 1143
MboI GATC 6 cut(s) 313, 595, 810, 965, 996, 1141
MboII GAAGA 5 cut(s) 85, 193, 233, 308, 856
MflI RGATCY 1 cut(s) 965
MhlI GDGCHC 2 cut(s) 199, 1099
MluCI AATT 5 cut(s) 259, 600, 712, 1090, 1241
MmeI TCCRAC 3 cut(s) 269, 763, 993
MroXI GAANNNNTTC 2 cut(s) 59, 390
MseI TTAA 7 cut(s) 290, 506, 900, 951, 1041, 1062, 1154
MslI CAYNNNNRTG 2 cut(s) 508, 834
MspA1I CMGCKG 1 cut(s) 306
MspCI CTTAAG 1 cut(s) 950
MspI CCGG 4 cut(s) 328, 341, 620, 959
MspR9I CCNGG 3 cut(s) 342, 959, 1221
Mva1269I GAATGC 1 cut(s) 576
MvaI CCWGG 1 cut(s) 1221
MvnI CGCG 1 cut(s) 14
MwoI GCNNNNNNNGC 4 cut(s) 309, 331, 337, 346
NciI CCSGG 2 cut(s) 342, 959
NdeII GATC 6 cut(s) 313, 595, 810, 965, 996, 1141
NheI GCTAGC 1 cut(s) 1082
NlaIII CATG 7 cut(s) 148, 418, 484, 775, 794, 833, 887
NlaIV GGNNCC 1 cut(s) 967
NspV TTCGAA 1 cut(s) 257
PagI TCATGA 1 cut(s) 790
PceI AGGCCT 1 cut(s) 736
PctI GAATGC 1 cut(s) 576
PdmI GAANNNNTTC 2 cut(s) 59, 390
PfeI GAWTC 4 cut(s) 16, 669, 728, 861
PfoI TCCNGGA 1 cut(s) 957
PinAI ACCGGT 1 cut(s) 619
PkrI GCNGC 9 cut(s) 305, 308, 311, 333, 367, 985, 1068, 1116, 1177
Psp124BI GAGCTC 1 cut(s) 199
Psp6I CCWGG 1 cut(s) 1219
PspEI GGTNACC 1 cut(s) 1215
PspFI CCCAGC 1 cut(s) 173
PspGI CCWGG 1 cut(s) 1219
PspN4I GGNNCC 1 cut(s) 967
PspPI GGNCC 5 cut(s) 229, 678, 768, 1003, 1223
PstI CTGCAG 1 cut(s) 305
PsuI RGATCY 1 cut(s) 965
RsaI GTAC 3 cut(s) 107, 431, 456
RsaNI GTAC 3 cut(s) 106, 430, 455
RseI CAYNNNNRTG 2 cut(s) 508, 834
SacI GAGCTC 1 cut(s) 199
SaqAI TTAA 7 cut(s) 290, 506, 900, 951, 1041, 1062, 1154
SatI GCNGC 9 cut(s) 304, 307, 310, 332, 366, 984, 1067, 1115, 1176
Sau3AI GATC 6 cut(s) 313, 595, 810, 965, 996, 1141
Sau96I GGNCC 5 cut(s) 229, 678, 768, 1003, 1223
ScrFI CCNGG 3 cut(s) 342, 959, 1221
SduI GDGCHC 2 cut(s) 199, 1099
SexAI ACCWGGT 1 cut(s) 1219
SfaNI GCATC 1 cut(s) 1078
SfcI CTRYAG 3 cut(s) 301, 1053, 1200
SfuI TTCGAA 1 cut(s) 257
SinI GGWCC 4 cut(s) 229, 678, 768, 1223
SmiMI CAYNNNNRTG 2 cut(s) 508, 834
SmlI CTYRAG 2 cut(s) 401, 950
SmoI CTYRAG 2 cut(s) 401, 950
SpeI ACTAGT 1 cut(s) 457
Sse9I AATT 5 cut(s) 259, 600, 712, 1090, 1241
SseBI AGGCCT 1 cut(s) 736
SsiI CCGC 3 cut(s) 4, 306, 309
SspI AATATT 1 cut(s) 797
SspMI CTAG 4 cut(s) 362, 458, 1034, 1083
SstI GAGCTC 1 cut(s) 199
StuI AGGCCT 1 cut(s) 736
StyD4I CCNGG 3 cut(s) 340, 957, 1219
StyI CCWWGG 2 cut(s) 690, 987
TaaI ACNGT 1 cut(s) 768
TaqI TCGA 4 cut(s) 257, 264, 667, 731
TasI AATT 5 cut(s) 259, 600, 712, 1090, 1241
TatI WGTACW 3 cut(s) 105, 429, 454
TauI GCSGC 2 cut(s) 309, 312
TfiI GAWTC 4 cut(s) 16, 669, 728, 861
Tru1I TTAA 7 cut(s) 290, 506, 900, 951, 1041, 1062, 1154
Tru9I TTAA 7 cut(s) 290, 506, 900, 951, 1041, 1062, 1154
TscAI CASTG 1 cut(s) 841
TseI GCWGC 7 cut(s) 303, 331, 365, 983, 1066, 1114, 1175
TspDTI ATGAA 4 cut(s) 161, 308, 807, 872
TspGWI ACGGA 1 cut(s) 13
TspRI CASTG 1 cut(s) 841
Vha464I CTTAAG 1 cut(s) 950
VpaK11BI GGWCC 4 cut(s) 229, 678, 768, 1223
XapI RAATTY 3 cut(s) 259, 712, 1241
XcmI CCANNNNNNNNNTGG 1 cut(s) 151
XmnI GAANNNNTTC 2 cut(s) 59, 390
XspI CTAG 4 cut(s) 362, 458, 1034, 1083
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.