Rmu_sc0014601.1_g000015
NAC Family

Inactive leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014601.1
OG0019095
Physical Location & Seq
Forward (+)
49996 .. 50943
948 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0014601.1_g000015.1.cds

Sequence Viewer

Length: 660 bp
atgattcagtttgacgtgaacttgaccgaaaactatagaaggtttgattttgatgataatatgcagctttacaaaggtagactaaagaatgggatccaagttgttattaggtgcctgcttgtatcaaagaaatacacaattcgaaatcttaaactctccggttggattttgcttgccaagcttcgtcacccgtatttaggacactgcctcgacggtggtggagatgattacagtgtgaacaaggtgtatcttgtatctgagtatgtggcaaatgggacctttcgtgctaaactctctggtaggcctgaaaaagttctcaactggccacggagattgtcagtcctcatcagtgtggccaaggctgtgcacttcctacatactggaattattccaggtttcttgagcaaccggctgaagacgaacaacatcttgctcaatttcaatgagcatgataatgcaaaattgagcaactacggactgtccattgtctcagaagaaactgataagtctatggcaaacgaaggccgtaagtcatggcaaatgaaaagtttagaggatgatgcttatagcttcggatatatattgctcgaggctattgttggagcttcgatctctgctagaagagaggcattcctgctaaatgatatggtaaatgattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

219

Amino Acids

24.97

Weight (kDa)

9.24

Isoelectric Point (pI)

22.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0019095)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0014601.1_g000015
rosa_samantha Rh7AG111200 Rh7AG111300 Rh7BG114100 Rh7BG114200 Rh7CG116100 Rh7DG115000 Rh7DG115100
rosa_wichuraiana Rw7G009710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 111
AccI GTMKAC 1 cut(s) 79
AclWI GGATC 2 cut(s) 88, 101
AcoI YGGCCR 2 cut(s) 323, 354
AcuI CTGAAG 1 cut(s) 434
AfiI CCNNNNNNNGG 1 cut(s) 197
AgsI TTSAA 1 cut(s) 442
AjiI CACGTC 1 cut(s) 16
AjnI CCWGG 1 cut(s) 391
AluBI AGCT 4 cut(s) 67, 181, 570, 605
AluI AGCT 4 cut(s) 67, 181, 570, 605
Alw21I GWGCWC 1 cut(s) 369
Alw26I GTCTC 1 cut(s) 493
Alw44I GTGCAC 1 cut(s) 365
AlwI GGATC 2 cut(s) 88, 101
Ama87I CYCGRG 1 cut(s) 587
AoxI GGCC 4 cut(s) 302, 323, 354, 523
ApaLI GTGCAC 1 cut(s) 365
ApeKI GCWGC 1 cut(s) 64
Asp700I GAANNNNTTC 1 cut(s) 312
AspS9I GGNCC 1 cut(s) 276
AsuHPI GGTGA 1 cut(s) 179
AsuII TTCGAA 1 cut(s) 142
AvaI CYCGRG 1 cut(s) 587
AvaII GGWCC 1 cut(s) 276
BaeGI GKGCMC 1 cut(s) 369
BalI TGGCCA 2 cut(s) 325, 356
BamHI GGATCC 1 cut(s) 93
BanI GGYRCC 1 cut(s) 111
BbsI GAAGAC 1 cut(s) 422
Bbv12I GWGCWC 1 cut(s) 369
BbvI GCAGC 1 cut(s) 76
BceAI ACGGC 1 cut(s) 510
BciT130I CCWGG 1 cut(s) 393
BcoDI GTCTC 1 cut(s) 493
BfaI CTAG 1 cut(s) 618
BfmI CTRYAG 1 cut(s) 34
BisI GCNGC 1 cut(s) 65
BlsI GCNGC 1 cut(s) 66
Bme1390I CCNGG 1 cut(s) 393
Bme18I GGWCC 1 cut(s) 276
BmeT110I CYCGRG 1 cut(s) 587
BmgBI CACGTC 1 cut(s) 16
BmgT120I GGNCC 1 cut(s) 276
BmiI GGNNCC 3 cut(s) 95, 113, 277
BmrFI CCNGG 1 cut(s) 393
BmsI GCATC 1 cut(s) 550
BpiI GAAGAC 1 cut(s) 422
Bpu14I TTCGAA 1 cut(s) 142
BpuEI CTTGAG 1 cut(s) 421
BsaJI CCNNGG 2 cut(s) 326, 357
BsaWI WCCGGW 1 cut(s) 158
Bsc4I CCNNNNNNNGG 1 cut(s) 197
Bse118I RCCGGY 1 cut(s) 408
Bse1I ACTGG 2 cut(s) 326, 385
BseBI CCWGG 1 cut(s) 393
BseDI CCNNGG 2 cut(s) 326, 357
BseGI GGATG 1 cut(s) 562
BseLI CCNNNNNNNGG 1 cut(s) 197
BseMII CTCAG 2 cut(s) 249, 504
BseNI ACTGG 2 cut(s) 326, 385
BseSI GKGCMC 1 cut(s) 369
BseXI GCAGC 1 cut(s) 76
BshFI GGCC 4 cut(s) 304, 325, 356, 525
BshNI GGYRCC 1 cut(s) 111
BsiHKAI GWGCWC 1 cut(s) 369
BsiHKCI CYCGRG 1 cut(s) 587
BsiSI CCGG 2 cut(s) 159, 409
BslFI GGGAC 1 cut(s) 289
BslI CCNNNNNNNGG 1 cut(s) 197
BsmAI GTCTC 1 cut(s) 493
BsmFI GGGAC 1 cut(s) 289
BsmI GAATGC 1 cut(s) 629
BsnI GGCC 4 cut(s) 304, 325, 356, 525
BsoBI CYCGRG 1 cut(s) 587
Bsp119I TTCGAA 1 cut(s) 142
Bsp1286I GDGCHC 1 cut(s) 369
Bsp143I GATC 2 cut(s) 93, 609
BspANI GGCC 4 cut(s) 304, 325, 356, 525
BspCNI CTCAG 2 cut(s) 250, 503
BspLI GGNNCC 3 cut(s) 95, 113, 277
BspPI GGATC 2 cut(s) 88, 101
BspT104I TTCGAA 1 cut(s) 142
BspT107I GGYRCC 1 cut(s) 111
BsrFI RCCGGY 1 cut(s) 408
BsrI ACTGG 2 cut(s) 326, 385
BssAI RCCGGY 1 cut(s) 408
BssECI CCNNGG 2 cut(s) 326, 357
BssMI GATC 2 cut(s) 93, 609
BssT1I CCWWGG 1 cut(s) 357
Bst2UI CCWGG 1 cut(s) 393
Bst4CI ACNGT 3 cut(s) 215, 233, 480
Bst6I CTCTTC 1 cut(s) 616
BstBI TTCGAA 1 cut(s) 142
BstC8I GCNNGC 2 cut(s) 116, 174
BstDEI CTNAG 2 cut(s) 258, 490
BstDSI CCRYGG 1 cut(s) 326
BstF5I GGATG 1 cut(s) 562
BstKTI GATC 2 cut(s) 96, 612
BstMAI GTCTC 1 cut(s) 493
BstMBI GATC 2 cut(s) 93, 609
BstMWI GCNNNNNNNGC 1 cut(s) 178
BstNI CCWGG 1 cut(s) 393
BstSCI CCNGG 1 cut(s) 391
BstSFI CTRYAG 1 cut(s) 34
BstSLI GKGCMC 1 cut(s) 369
BstV1I GCAGC 1 cut(s) 76
BstV2I GAAGAC 1 cut(s) 422
BstX2I RGATCY 1 cut(s) 93
BstYI RGATCY 1 cut(s) 93
BsuRI GGCC 4 cut(s) 304, 325, 356, 525
BtgI CCRYGG 1 cut(s) 326
BtrI CACGTC 1 cut(s) 16
BtsCI GGATG 1 cut(s) 562
BtsI GCAGTG 1 cut(s) 202
BtsIMutI CAGTG 3 cut(s) 202, 238, 355
Cac8I GCNNGC 2 cut(s) 116, 174
Cfr10I RCCGGY 1 cut(s) 408
Cfr13I GGNCC 1 cut(s) 276
CspCI CAANNNNNGTGG 2 cut(s) 315, 350
CviAII CATG 2 cut(s) 449, 534
DdeI CTNAG 2 cut(s) 258, 490
DpnI GATC 2 cut(s) 95, 611
DpnII GATC 2 cut(s) 93, 609
EaeI YGGCCR 2 cut(s) 323, 354
Eam1104I CTCTTC 1 cut(s) 616
EarI CTCTTC 1 cut(s) 616
Eco130I CCWWGG 1 cut(s) 357
Eco147I AGGCCT 1 cut(s) 304
Eco47I GGWCC 1 cut(s) 276
Eco57I CTGAAG 1 cut(s) 434
Eco88I CYCGRG 1 cut(s) 587
EcoO109I RGGNCCY 1 cut(s) 276
EcoRII CCWGG 1 cut(s) 391
EcoT14I CCWWGG 1 cut(s) 357
ErhI CCWWGG 1 cut(s) 357
FaeI CATG 2 cut(s) 452, 537
FaqI GGGAC 1 cut(s) 289
FatI CATG 2 cut(s) 448, 533
FblI GTMKAC 1 cut(s) 79
Fnu4HI GCNGC 1 cut(s) 65
FokI GGATG 1 cut(s) 569
Fsp4HI GCNGC 1 cut(s) 65
FspBI CTAG 1 cut(s) 618
GluI GCNGC 1 cut(s) 65
HaeIII GGCC 4 cut(s) 304, 325, 356, 525
HapII CCGG 2 cut(s) 159, 409
Hin1II CATG 2 cut(s) 452, 537
HindIII AAGCTT 1 cut(s) 179
HinfI GANTC 1 cut(s) 4
HpaII CCGG 2 cut(s) 159, 409
HphI GGTGA 1 cut(s) 179
Hpy166II GTNNAC 4 cut(s) 19, 80, 238, 367
Hpy188I TCNGA 3 cut(s) 259, 493, 575
Hpy188III TCNNGA 1 cut(s) 400
Hpy8I GTNNAC 4 cut(s) 19, 80, 238, 367
Hpy99I CGWCG 1 cut(s) 215
HpyAV CCTTC 2 cut(s) 33, 515
HpyCH4III ACNGT 3 cut(s) 215, 233, 480
HpyCH4IV ACGT 1 cut(s) 15
HpyCH4V TGCA 3 cut(s) 64, 367, 458
HpyF10VI GCNNNNNNNGC 1 cut(s) 178
HpyF3I CTNAG 2 cut(s) 258, 490
HpySE526I ACGT 1 cut(s) 15
Hsp92II CATG 2 cut(s) 452, 537
Kzo9I GATC 2 cut(s) 93, 609
LmnI GCTCC 1 cut(s) 602
Lsp1109I GCAGC 1 cut(s) 76
LweI GCATC 1 cut(s) 550
MaeI CTAG 1 cut(s) 618
MaeII ACGT 1 cut(s) 15
MaeIII GTNAC 1 cut(s) 185
MalI GATC 2 cut(s) 95, 611
MboI GATC 2 cut(s) 93, 609
MboII GAAGA 3 cut(s) 427, 506, 633
MflI RGATCY 1 cut(s) 93
MhlI GDGCHC 1 cut(s) 369
MlsI TGGCCA 2 cut(s) 325, 356
MluCI AATT 4 cut(s) 138, 384, 436, 461
MluNI TGGCCA 2 cut(s) 325, 356
MmeI TCCRAC 2 cut(s) 143, 580
MnlI CCTC 5 cut(s) 218, 353, 547, 583, 619
Mox20I TGGCCA 2 cut(s) 325, 356
MroXI GAANNNNTTC 1 cut(s) 312
MscI TGGCCA 2 cut(s) 325, 356
MseI TTAA 2 cut(s) 150, 658
MslI CAYNNNNRTG 2 cut(s) 350, 453
Msp20I TGGCCA 2 cut(s) 325, 356
MspI CCGG 2 cut(s) 159, 409
MspR9I CCNGG 1 cut(s) 393
Mva1269I GAATGC 1 cut(s) 629
MvaI CCWGG 1 cut(s) 393
MwoI GCNNNNNNNGC 1 cut(s) 178
NdeII GATC 2 cut(s) 93, 609
NlaIII CATG 2 cut(s) 452, 537
NlaIV GGNNCC 3 cut(s) 95, 113, 277
NmuCI GTSAC 1 cut(s) 185
NspV TTCGAA 1 cut(s) 142
PaeR7I CTCGAG 1 cut(s) 587
PceI AGGCCT 1 cut(s) 304
PctI GAATGC 1 cut(s) 629
PdmI GAANNNNTTC 1 cut(s) 312
PfeI GAWTC 1 cut(s) 4
PkrI GCNGC 1 cut(s) 66
PpuMI RGGWCCY 1 cut(s) 276
Psp5II RGGWCCY 1 cut(s) 276
Psp6I CCWGG 1 cut(s) 391
PspGI CCWGG 1 cut(s) 391
PspN4I GGNNCC 3 cut(s) 95, 113, 277
PspPI GGNCC 1 cut(s) 276
PspPPI RGGWCCY 1 cut(s) 276
PspXI VCTCGAGB 1 cut(s) 587
PsuI RGATCY 1 cut(s) 93
RseI CAYNNNNRTG 2 cut(s) 350, 453
SaqAI TTAA 2 cut(s) 150, 658
SatI GCNGC 1 cut(s) 65
Sau3AI GATC 2 cut(s) 93, 609
Sau96I GGNCC 1 cut(s) 276
ScrFI CCNGG 1 cut(s) 393
SduI GDGCHC 1 cut(s) 369
SfaNI GCATC 1 cut(s) 550
SfcI CTRYAG 1 cut(s) 34
Sfr274I CTCGAG 1 cut(s) 587
SfuI TTCGAA 1 cut(s) 142
SinI GGWCC 1 cut(s) 276
SlaI CTCGAG 1 cut(s) 587
SmiMI CAYNNNNRTG 2 cut(s) 350, 453
SmlI CTYRAG 2 cut(s) 400, 587
SmoI CTYRAG 2 cut(s) 400, 587
Sse9I AATT 4 cut(s) 138, 384, 436, 461
SseBI AGGCCT 1 cut(s) 304
SspMI CTAG 1 cut(s) 618
StuI AGGCCT 1 cut(s) 304
StyD4I CCNGG 1 cut(s) 391
StyI CCWWGG 1 cut(s) 357
TaaI ACNGT 3 cut(s) 215, 233, 480
TaiI ACGT 1 cut(s) 18
TaqI TCGA 4 cut(s) 142, 210, 588, 608
TaqII GACCGA 1 cut(s) 41
TasI AATT 4 cut(s) 138, 384, 436, 461
TfiI GAWTC 1 cut(s) 4
Tru1I TTAA 2 cut(s) 150, 658
Tru9I TTAA 2 cut(s) 150, 658
TscAI CASTG 3 cut(s) 209, 238, 355
TseFI GTSAC 1 cut(s) 185
TseI GCWGC 1 cut(s) 64
Tsp45I GTSAC 1 cut(s) 185
TspDTI ATGAA 1 cut(s) 557
TspGWI ACGGA 2 cut(s) 343, 489
TspRI CASTG 3 cut(s) 209, 238, 355
VneI GTGCAC 1 cut(s) 365
VpaK11BI GGWCC 1 cut(s) 276
XhoI CTCGAG 1 cut(s) 587
XmiI GTMKAC 1 cut(s) 79
XmnI GAANNNNTTC 1 cut(s) 312
XspI CTAG 1 cut(s) 618
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.