Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD11G1163700.v1.1 |
| pyrus_communis | pycom11g13520 |
| rosa_chinensis | RchiOBHm_Chr5g0044291 |
| rosa_laevigata | RLG00000034263 |
| rosa_multiflora | Rmu_sc0015666.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00036670 |
| rosa_rugosa | Rorug05G0212900 |
| rosa_samantha | Rh5AG297500 Rh5BG304800 Rh5CG331700 Rh5DG314000 |
| rosa_wichuraiana | Rw5G027530 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1872 |
| AatII | GACGTC | 1 cut(s) | 734 |
| Acc36I | ACCTGC | 1 cut(s) | 2572 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2750 |
| AccIII | TCCGGA | 1 cut(s) | 613 |
| AciI | CCGC | 4 cut(s) | 12, 1298, 1331, 2483 |
| AclWI | GGATC | 6 cut(s) | 431, 949, 1982, 2336, 2915, 3002 |
| AcoI | YGGCCR | 1 cut(s) | 406 |
| AcsI | RAATTY | 8 cut(s) | 319, 544, 925, 1530, 1583, 2420, 2541, 2828 |
| AcvI | CACGTG | 1 cut(s) | 377 |
| AcyI | GRCGYC | 1 cut(s) | 731 |
| AdeI | CACNNNGTG | 3 cut(s) | 505, 1810, 2123 |
| AfaI | GTAC | 7 cut(s) | 285, 470, 907, 1223, 1560, 1633, 2043 |
| AfeI | AGCGCT | 2 cut(s) | 1086, 1363 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 769, 1479, 1970, 2574, 2655, 2750, 2981 |
| AflII | CTTAAG | 1 cut(s) | 1819 |
| AflIII | ACRYGT | 1 cut(s) | 2400 |
| AjnI | CCWGG | 4 cut(s) | 1543, 2119, 2505, 2951 |
| AleI | CACNNNNGTG | 1 cut(s) | 171 |
| Alw26I | GTCTC | 6 cut(s) | 22, 522, 1657, 1695, 1887, 2793 |
| AlwI | GGATC | 6 cut(s) | 431, 949, 1982, 2336, 2915, 3002 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 281, 2578 |
| Aor13HI | TCCGGA | 1 cut(s) | 613 |
| Aor51HI | AGCGCT | 2 cut(s) | 1086, 1363 |
| AoxI | GGCC | 8 cut(s) | 175, 406, 815, 1054, 1069, 1758, 2175, 2534 |
| ApeKI | GCWGC | 5 cut(s) | 366, 1403, 1960, 2578, 2770 |
| ApoI | RAATTY | 8 cut(s) | 319, 544, 925, 1530, 1583, 2420, 2541, 2828 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 851, 883 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2657 |
| AspA2I | CCTAGG | 1 cut(s) | 1072 |
| AspLEI | GCGC | 3 cut(s) | 87, 1087, 1364 |
| AspS9I | GGNCC | 4 cut(s) | 214, 1759, 2126, 2415 |
| AsuC2I | CCSGG | 4 cut(s) | 212, 503, 827, 1971 |
| AsuHPI | GGTGA | 5 cut(s) | 28, 752, 1975, 2109, 2133 |
| AvaII | GGWCC | 3 cut(s) | 214, 2126, 2415 |
| AvrII | CCTAGG | 1 cut(s) | 1072 |
| BaeGI | GKGCMC | 1 cut(s) | 1287 |
| BalI | TGGCCA | 1 cut(s) | 408 |
| BauI | CACGAG | 1 cut(s) | 591 |
| BbrPI | CACGTG | 1 cut(s) | 377 |
| BbvCI | CCTCAGC | 1 cut(s) | 684 |
| BbvI | GCAGC | 5 cut(s) | 378, 1390, 1947, 2565, 2782 |
| BccI | CCATC | 6 cut(s) | 644, 1479, 1750, 1917, 2156, 2671 |
| BciT130I | CCWGG | 4 cut(s) | 1545, 2121, 2507, 2953 |
| BciVI | GTATCC | 2 cut(s) | 1667, 2358 |
| BcnI | CCSGG | 4 cut(s) | 212, 503, 827, 1971 |
| BcoDI | GTCTC | 6 cut(s) | 22, 522, 1657, 1695, 1887, 2793 |
| BfaI | CTAG | 7 cut(s) | 179, 1073, 1178, 1656, 2045, 2145, 2393 |
| BfmI | CTRYAG | 3 cut(s) | 1338, 2179, 2579 |
| BfoI | RGCGCY | 2 cut(s) | 1088, 1365 |
| BfrI | CTTAAG | 1 cut(s) | 1819 |
| BfuAI | ACCTGC | 1 cut(s) | 2572 |
| BfuI | GTATCC | 2 cut(s) | 1667, 2358 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1412 |
| BglII | AGATCT | 2 cut(s) | 2254, 2694 |
| BisI | GCNGC | 5 cut(s) | 367, 1404, 1961, 2579, 2771 |
| BlnI | CCTAGG | 1 cut(s) | 1072 |
| BlsI | GCNGC | 5 cut(s) | 368, 1405, 1962, 2580, 2772 |
| BmcAI | AGTACT | 2 cut(s) | 1560, 2043 |
| Bme1390I | CCNGG | 8 cut(s) | 212, 503, 827, 1545, 1971, 2121, 2507, 2953 |
| Bme18I | GGWCC | 3 cut(s) | 214, 2126, 2415 |
| BmgT120I | GGNCC | 4 cut(s) | 214, 1759, 2126, 2415 |
| BmiI | GGNNCC | 5 cut(s) | 215, 216, 1428, 1927, 2416 |
| BmrFI | CCNGG | 8 cut(s) | 212, 503, 827, 1545, 1971, 2121, 2507, 2953 |
| BmrI | ACTGGG | 1 cut(s) | 2030 |
| BmsI | GCATC | 4 cut(s) | 715, 811, 1244, 1324 |
| BmuI | ACTGGG | 1 cut(s) | 2030 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1637, 1669, 2139, 2171 |
| BpmI | CTGGAG | 2 cut(s) | 1413, 1884 |
| Bpu10I | CCTNAGC | 1 cut(s) | 684 |
| BpuEI | CTTGAG | 4 cut(s) | 1394, 1423, 1677, 2259 |
| BpuMI | CCSGG | 4 cut(s) | 212, 503, 827, 1971 |
| BsaAI | YACGTR | 1 cut(s) | 377 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2225, 2346 |
| BsaHI | GRCGYC | 1 cut(s) | 731 |
| BsaI | GGTCTC | 3 cut(s) | 522, 1887, 2793 |
| BsaWI | WCCGGW | 1 cut(s) | 613 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 569, 599, 1164, 1194 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 769, 1479, 1970, 2574, 2655, 2750, 2981 |
| Bse1I | ACTGG | 5 cut(s) | 562, 1040, 2036, 2534, 2811 |
| Bse3DI | GCAATG | 6 cut(s) | 350, 648, 852, 1507, 2031, 2934 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2225, 2346 |
| BseAI | TCCGGA | 1 cut(s) | 613 |
| BseBI | CCWGG | 4 cut(s) | 1545, 2121, 2507, 2953 |
| BseGI | GGATG | 7 cut(s) | 131, 471, 488, 1259, 1339, 1495, 2649 |
| BseJI | GATNNNNATC | 2 cut(s) | 2225, 2346 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 769, 1479, 1970, 2574, 2655, 2750, 2981 |
| BseMI | GCAATG | 6 cut(s) | 350, 648, 852, 1507, 2031, 2934 |
| BseMII | CTCAG | 5 cut(s) | 536, 675, 861, 1372, 2170 |
| BseNI | ACTGG | 5 cut(s) | 562, 1040, 2036, 2534, 2811 |
| BseRI | GAGGAG | 4 cut(s) | 701, 1307, 1445, 1658 |
| BseSI | GKGCMC | 1 cut(s) | 1287 |
| BseXI | GCAGC | 5 cut(s) | 378, 1390, 1947, 2565, 2782 |
| BseYI | CCCAGC | 1 cut(s) | 478 |
| BsgI | GTGCAG | 2 cut(s) | 385, 1727 |
| BshFI | GGCC | 8 cut(s) | 177, 408, 817, 1056, 1071, 1760, 2177, 2536 |
| BsiSI | CCGG | 5 cut(s) | 211, 502, 614, 827, 1970 |
| BslFI | GGGAC | 4 cut(s) | 227, 635, 750, 1046 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 769, 1479, 1970, 2574, 2655, 2750, 2981 |
| BsmAI | GTCTC | 6 cut(s) | 22, 522, 1657, 1695, 1887, 2793 |
| BsmFI | GGGAC | 4 cut(s) | 227, 635, 750, 1046 |
| BsmI | GAATGC | 3 cut(s) | 457, 810, 991 |
| BsnI | GGCC | 8 cut(s) | 177, 408, 817, 1056, 1071, 1760, 2177, 2536 |
| Bso31I | GGTCTC | 3 cut(s) | 522, 1887, 2793 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1287 |
| Bsp13I | TCCGGA | 1 cut(s) | 613 |
| Bsp19I | CCATGG | 3 cut(s) | 169, 1168, 2624 |
| BspACI | CCGC | 4 cut(s) | 12, 1298, 1331, 2483 |
| BspANI | GGCC | 8 cut(s) | 177, 408, 817, 1056, 1071, 1760, 2177, 2536 |
| BspCNI | CTCAG | 5 cut(s) | 535, 676, 860, 1371, 2169 |
| BspEI | TCCGGA | 1 cut(s) | 613 |
| BspHI | TCATGA | 2 cut(s) | 1078, 1579 |
| BspLI | GGNNCC | 5 cut(s) | 215, 216, 1428, 1927, 2416 |
| BspMAI | CTGCAG | 1 cut(s) | 2583 |
| BspMI | ACCTGC | 1 cut(s) | 2572 |
| BspPI | GGATC | 6 cut(s) | 431, 949, 1982, 2336, 2915, 3002 |
| BspTI | CTTAAG | 1 cut(s) | 1819 |
| BspTNI | GGTCTC | 3 cut(s) | 522, 1887, 2793 |
| BsrDI | GCAATG | 6 cut(s) | 350, 648, 852, 1507, 2031, 2934 |
| BsrI | ACTGG | 5 cut(s) | 562, 1040, 2036, 2534, 2811 |
| BssNI | GRCGYC | 1 cut(s) | 731 |
| BssSI | CACGAG | 1 cut(s) | 591 |
| BssT1I | CCWWGG | 5 cut(s) | 169, 768, 1072, 1168, 2624 |
| Bst2BI | CACGAG | 1 cut(s) | 591 |
| Bst2UI | CCWGG | 4 cut(s) | 1545, 2121, 2507, 2953 |
| Bst4CI | ACNGT | 7 cut(s) | 764, 1199, 1619, 1904, 1981, 2056, 2930 |
| Bst6I | CTCTTC | 5 cut(s) | 293, 313, 656, 1707, 2315 |
| BstACI | GRCGYC | 1 cut(s) | 731 |
| BstAFI | CTTAAG | 1 cut(s) | 1819 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2030 |
| BstBAI | YACGTR | 1 cut(s) | 377 |
| BstC8I | GCNNGC | 8 cut(s) | 89, 298, 302, 364, 681, 894, 1366, 2812 |
| BstDEI | CTNAG | 7 cut(s) | 522, 684, 847, 1144, 1236, 1358, 2156 |
| BstDSI | CCRYGG | 3 cut(s) | 169, 1168, 2624 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2572 |
| BstF5I | GGATG | 7 cut(s) | 131, 471, 488, 1259, 1339, 1495, 2649 |
| BstH2I | RGCGCY | 2 cut(s) | 1088, 1365 |
| BstHHI | GCGC | 3 cut(s) | 87, 1087, 1364 |
| BstMAI | GTCTC | 6 cut(s) | 22, 522, 1657, 1695, 1887, 2793 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1412, 2030, 2081 |
| BstNI | CCWGG | 4 cut(s) | 1545, 2121, 2507, 2953 |
| BstNSI | RCATGY | 2 cut(s) | 304, 896 |
| BstSCI | CCNGG | 8 cut(s) | 210, 501, 825, 1543, 1969, 2119, 2505, 2951 |
| BstSFI | CTRYAG | 3 cut(s) | 1338, 2179, 2579 |
| BstSLI | GKGCMC | 1 cut(s) | 1287 |
| BstV1I | GCAGC | 5 cut(s) | 378, 1390, 1947, 2565, 2782 |
| BstX2I | RGATCY | 2 cut(s) | 2254, 2694 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 173, 2257 |
| BstYI | RGATCY | 2 cut(s) | 2254, 2694 |
| BsuI | GTATCC | 2 cut(s) | 1667, 2358 |
| BsuRI | GGCC | 8 cut(s) | 177, 408, 817, 1056, 1071, 1760, 2177, 2536 |
| BtgI | CCRYGG | 3 cut(s) | 169, 1168, 2624 |
| BtsCI | GGATG | 7 cut(s) | 131, 471, 488, 1259, 1339, 1495, 2649 |
| BtsI | GCAGTG | 1 cut(s) | 2661 |
| BtsIMutI | CAGTG | 5 cut(s) | 548, 1624, 2061, 2164, 2661 |
| BveI | ACCTGC | 1 cut(s) | 2572 |
| Cac8I | GCNNGC | 8 cut(s) | 89, 298, 302, 364, 681, 894, 1366, 2812 |
| CaiI | CAGNNNCTG | 2 cut(s) | 281, 2578 |
| CciI | TCATGA | 2 cut(s) | 1078, 1579 |
| CfoI | GCGC | 3 cut(s) | 87, 1087, 1364 |
| Cfr13I | GGNCC | 4 cut(s) | 214, 1759, 2126, 2415 |
| CsiI | ACCWGGT | 1 cut(s) | 2119 |
| Csp6I | GTAC | 7 cut(s) | 284, 469, 906, 1222, 1559, 1632, 2042 |
| CviQI | GTAC | 7 cut(s) | 284, 469, 906, 1222, 1559, 1632, 2042 |
| DdeI | CTNAG | 7 cut(s) | 522, 684, 847, 1144, 1236, 1358, 2156 |
| DraIII | CACNNNGTG | 3 cut(s) | 505, 1810, 2123 |
| EaeI | YGGCCR | 1 cut(s) | 406 |
| Eam1104I | CTCTTC | 5 cut(s) | 293, 313, 656, 1707, 2315 |
| EarI | CTCTTC | 5 cut(s) | 293, 313, 656, 1707, 2315 |
| EciI | GGCGGA | 1 cut(s) | 1346 |
| Eco130I | CCWWGG | 5 cut(s) | 169, 768, 1072, 1168, 2624 |
| Eco31I | GGTCTC | 3 cut(s) | 522, 1887, 2793 |
| Eco47I | GGWCC | 3 cut(s) | 214, 2126, 2415 |
| Eco47III | AGCGCT | 2 cut(s) | 1086, 1363 |
| Eco72I | CACGTG | 1 cut(s) | 377 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2572 |
| EcoO109I | RGGNCCY | 1 cut(s) | 214 |
| EcoRI | GAATTC | 6 cut(s) | 544, 925, 1530, 1583, 2541, 2828 |
| EcoRII | CCWGG | 4 cut(s) | 1543, 2119, 2505, 2951 |
| EcoT14I | CCWWGG | 5 cut(s) | 169, 768, 1072, 1168, 2624 |
| EcoT22I | ATGCAT | 4 cut(s) | 457, 708, 1068, 1259 |
| ErhI | CCWWGG | 5 cut(s) | 169, 768, 1072, 1168, 2624 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 3020 |
| FaqI | GGGAC | 4 cut(s) | 227, 635, 750, 1046 |
| FauNDI | CATATG | 1 cut(s) | 2377 |
| Fnu4HI | GCNGC | 5 cut(s) | 367, 1404, 1961, 2579, 2771 |
| FokI | GGATG | 7 cut(s) | 118, 478, 495, 1266, 1346, 1502, 2656 |
| Fsp4HI | GCNGC | 5 cut(s) | 367, 1404, 1961, 2579, 2771 |
| FspBI | CTAG | 7 cut(s) | 179, 1073, 1178, 1656, 2045, 2145, 2393 |
| GlaI | GCGC | 3 cut(s) | 86, 1086, 1363 |
| GluI | GCNGC | 5 cut(s) | 367, 1404, 1961, 2579, 2771 |
| GsaI | CCCAGC | 1 cut(s) | 482 |
| GsuI | CTGGAG | 2 cut(s) | 1413, 1884 |
| HaeII | RGCGCY | 2 cut(s) | 1088, 1365 |
| HaeIII | GGCC | 8 cut(s) | 177, 408, 817, 1056, 1071, 1760, 2177, 2536 |
| HapII | CCGG | 5 cut(s) | 211, 502, 614, 827, 1970 |
| HhaI | GCGC | 3 cut(s) | 87, 1087, 1364 |
| Hin1I | GRCGYC | 1 cut(s) | 731 |
| Hin6I | GCGC | 3 cut(s) | 85, 1085, 1362 |
| HinP1I | GCGC | 3 cut(s) | 85, 1085, 1362 |
| HincII | GTYRAC | 2 cut(s) | 124, 2287 |
| HindII | GTYRAC | 2 cut(s) | 124, 2287 |
| HindIII | AAGCTT | 1 cut(s) | 2945 |
| HpaII | CCGG | 5 cut(s) | 211, 502, 614, 827, 1970 |
| HphI | GGTGA | 5 cut(s) | 28, 752, 1975, 2109, 2133 |
| Hpy166II | GTNNAC | 7 cut(s) | 124, 2117, 2287, 2524, 2661, 2881, 2926 |
| Hpy188I | TCNGA | 6 cut(s) | 259, 475, 525, 2574, 2590, 2737 |
| Hpy8I | GTNNAC | 7 cut(s) | 124, 2117, 2287, 2524, 2661, 2881, 2926 |
| HpyAV | CCTTC | 7 cut(s) | 235, 872, 1181, 1342, 1591, 1664, 3022 |
| HpyCH4III | ACNGT | 7 cut(s) | 764, 1199, 1619, 1904, 1981, 2056, 2930 |
| HpyCH4IV | ACGT | 4 cut(s) | 376, 731, 2402, 2600 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1412, 2030, 2081 |
| HpyF3I | CTNAG | 7 cut(s) | 522, 684, 847, 1144, 1236, 1358, 2156 |
| HpySE526I | ACGT | 4 cut(s) | 376, 731, 2402, 2600 |
| Hsp92I | GRCGYC | 1 cut(s) | 731 |
| HspAI | GCGC | 3 cut(s) | 85, 1085, 1362 |
| KflI | GGGWCCC | 1 cut(s) | 214 |
| Kpn2I | TCCGGA | 1 cut(s) | 613 |
| LmnI | GCTCC | 5 cut(s) | 167, 348, 475, 1432, 2498 |
| Lsp1109I | GCAGC | 5 cut(s) | 378, 1390, 1947, 2565, 2782 |
| LweI | GCATC | 4 cut(s) | 715, 811, 1244, 1324 |
| MabI | ACCWGGT | 1 cut(s) | 2119 |
| MaeI | CTAG | 7 cut(s) | 179, 1073, 1178, 1656, 2045, 2145, 2393 |
| MaeII | ACGT | 4 cut(s) | 376, 731, 2402, 2600 |
| MaeIII | GTNAC | 8 cut(s) | 34, 372, 721, 1163, 1445, 1981, 2134, 2930 |
| MfeI | CAATTG | 1 cut(s) | 1389 |
| MflI | RGATCY | 2 cut(s) | 2254, 2694 |
| MhlI | GDGCHC | 1 cut(s) | 1287 |
| MlsI | TGGCCA | 1 cut(s) | 408 |
| MluNI | TGGCCA | 1 cut(s) | 408 |
| MlyI | GAGTC | 4 cut(s) | 811, 1430, 1724, 2573 |
| MmeI | TCCRAC | 1 cut(s) | 296 |
| Mox20I | TGGCCA | 1 cut(s) | 408 |
| Mph1103I | ATGCAT | 4 cut(s) | 457, 708, 1068, 1259 |
| MroI | TCCGGA | 1 cut(s) | 613 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2657 |
| MscI | TGGCCA | 1 cut(s) | 408 |
| MseI | TTAA | 8 cut(s) | 26, 603, 1611, 1820, 2294, 2364, 2669, 2846 |
| MslI | CAYNNNNRTG | 4 cut(s) | 171, 714, 1109, 1380 |
| Msp20I | TGGCCA | 1 cut(s) | 408 |
| MspCI | CTTAAG | 1 cut(s) | 1819 |
| MspI | CCGG | 5 cut(s) | 211, 502, 614, 827, 1970 |
| MspR9I | CCNGG | 8 cut(s) | 212, 503, 827, 1545, 1971, 2121, 2507, 2953 |
| MunI | CAATTG | 1 cut(s) | 1389 |
| Mva1269I | GAATGC | 3 cut(s) | 457, 810, 991 |
| MvaI | CCWGG | 4 cut(s) | 1545, 2121, 2507, 2953 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1412, 2030, 2081 |
| NciI | CCSGG | 4 cut(s) | 212, 503, 827, 1971 |
| NcoI | CCATGG | 3 cut(s) | 169, 1168, 2624 |
| NdeI | CATATG | 1 cut(s) | 2377 |
| NlaIV | GGNNCC | 5 cut(s) | 215, 216, 1428, 1927, 2416 |
| NmuCI | GTSAC | 4 cut(s) | 34, 372, 1981, 2134 |
| NsiI | ATGCAT | 4 cut(s) | 457, 708, 1068, 1259 |
| NspI | RCATGY | 2 cut(s) | 304, 896 |
| OliI | CACNNNNGTG | 1 cut(s) | 171 |
| PaeI | GCATGC | 2 cut(s) | 304, 896 |
| PagI | TCATGA | 2 cut(s) | 1078, 1579 |
| PctI | GAATGC | 3 cut(s) | 457, 810, 991 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2657 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2750 |
| PfoI | TCCNGGA | 1 cut(s) | 210 |
| PkrI | GCNGC | 5 cut(s) | 368, 1405, 1962, 2580, 2772 |
| PleI | GAGTC | 4 cut(s) | 810, 1430, 1724, 2572 |
| PmaCI | CACGTG | 1 cut(s) | 377 |
| PmlI | CACGTG | 1 cut(s) | 377 |
| PpsI | GAGTC | 4 cut(s) | 810, 1430, 1724, 2572 |
| Ppu21I | YACGTR | 1 cut(s) | 377 |
| PpuMI | RGGWCCY | 1 cut(s) | 214 |
| PsiI | TTATAA | 1 cut(s) | 1872 |
| Psp5II | RGGWCCY | 1 cut(s) | 214 |
| Psp6I | CCWGG | 4 cut(s) | 1543, 2119, 2505, 2951 |
| PspCI | CACGTG | 1 cut(s) | 377 |
| PspFI | CCCAGC | 1 cut(s) | 478 |
| PspGI | CCWGG | 4 cut(s) | 1543, 2119, 2505, 2951 |
| PspN4I | GGNNCC | 5 cut(s) | 215, 216, 1428, 1927, 2416 |
| PspPI | GGNCC | 4 cut(s) | 214, 1759, 2126, 2415 |
| PspPPI | RGGWCCY | 1 cut(s) | 214 |
| PstI | CTGCAG | 1 cut(s) | 2583 |
| PstNI | CAGNNNCTG | 2 cut(s) | 281, 2578 |
| PsuI | RGATCY | 2 cut(s) | 2254, 2694 |
| RsaI | GTAC | 7 cut(s) | 285, 470, 907, 1223, 1560, 1633, 2043 |
| RsaNI | GTAC | 7 cut(s) | 284, 469, 906, 1222, 1559, 1632, 2042 |
| RseI | CAYNNNNRTG | 4 cut(s) | 171, 714, 1109, 1380 |
| SaqAI | TTAA | 8 cut(s) | 26, 603, 1611, 1820, 2294, 2364, 2669, 2846 |
| SatI | GCNGC | 5 cut(s) | 367, 1404, 1961, 2579, 2771 |
| Sau96I | GGNCC | 4 cut(s) | 214, 1759, 2126, 2415 |
| ScaI | AGTACT | 2 cut(s) | 1560, 2043 |
| SchI | GAGTC | 4 cut(s) | 811, 1430, 1724, 2573 |
| ScrFI | CCNGG | 8 cut(s) | 212, 503, 827, 1545, 1971, 2121, 2507, 2953 |
| SduI | GDGCHC | 1 cut(s) | 1287 |
| SexAI | ACCWGGT | 1 cut(s) | 2119 |
| SfaNI | GCATC | 4 cut(s) | 715, 811, 1244, 1324 |
| SfcI | CTRYAG | 3 cut(s) | 1338, 2179, 2579 |
| SinI | GGWCC | 3 cut(s) | 214, 2126, 2415 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 171, 714, 1109, 1380 |
| SmlI | CTYRAG | 5 cut(s) | 1409, 1438, 1692, 1819, 2274 |
| SmoI | CTYRAG | 5 cut(s) | 1409, 1438, 1692, 1819, 2274 |
| SphI | GCATGC | 2 cut(s) | 304, 896 |
| SsiI | CCGC | 4 cut(s) | 12, 1298, 1331, 2483 |
| SspMI | CTAG | 7 cut(s) | 179, 1073, 1178, 1656, 2045, 2145, 2393 |
| StyD4I | CCNGG | 8 cut(s) | 210, 501, 825, 1543, 1969, 2119, 2505, 2951 |
| StyI | CCWWGG | 5 cut(s) | 169, 768, 1072, 1168, 2624 |
| TaaI | ACNGT | 7 cut(s) | 764, 1199, 1619, 1904, 1981, 2056, 2930 |
| TaiI | ACGT | 4 cut(s) | 379, 734, 2405, 2603 |
| TaqI | TCGA | 7 cut(s) | 205, 333, 435, 1460, 1879, 2539, 2832 |
| TatI | WGTACW | 4 cut(s) | 283, 468, 1558, 2041 |
| Tru1I | TTAA | 8 cut(s) | 26, 603, 1611, 1820, 2294, 2364, 2669, 2846 |
| Tru9I | TTAA | 8 cut(s) | 26, 603, 1611, 1820, 2294, 2364, 2669, 2846 |
| TscAI | CASTG | 5 cut(s) | 555, 1624, 2061, 2164, 2668 |
| TseFI | GTSAC | 4 cut(s) | 34, 372, 1981, 2134 |
| TseI | GCWGC | 5 cut(s) | 366, 1403, 1960, 2578, 2770 |
| Tsp45I | GTSAC | 4 cut(s) | 34, 372, 1981, 2134 |
| TspGWI | ACGGA | 4 cut(s) | 429, 1239, 2334, 2611 |
| TspRI | CASTG | 5 cut(s) | 555, 1624, 2061, 2164, 2668 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2750 |
| Vha464I | CTTAAG | 1 cut(s) | 1819 |
| VpaK11BI | GGWCC | 3 cut(s) | 214, 2126, 2415 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2572 |
| XapI | RAATTY | 8 cut(s) | 319, 544, 925, 1530, 1583, 2420, 2541, 2828 |
| XceI | RCATGY | 2 cut(s) | 304, 896 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 859 |
| XmaJI | CCTAGG | 1 cut(s) | 1072 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2657 |
| XspI | CTAG | 7 cut(s) | 179, 1073, 1178, 1656, 2045, 2145, 2393 |
| ZraI | GACGTC | 1 cut(s) | 732 |
| ZrmI | AGTACT | 2 cut(s) | 1560, 2043 |
| Zsp2I | ATGCAT | 4 cut(s) | 457, 708, 1068, 1259 |